Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066363.t1 | XP_013458264.1 | 97.4 | 467 | 12 | 0 | 1 | 467 | 54 | 520 | 2.50E-247 | 864.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066363.t1 | Q9M7Z1 | 60.2 | 457 | 147 | 3 | 11 | 467 | 62 | 483 | 2.4e-150 | 533.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066363.t1 | A0A072V2G4 | 97.4 | 467 | 12 | 0 | 1 | 467 | 54 | 520 | 1.8e-247 | 864.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052922 | MS.gene066363 | 0.880639 | 4.65E-70 | -1.69E-46 |
| MS.gene058127 | MS.gene066363 | 0.803371 | 3.60E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene066363 | MS.gene065539 | PPI |
| MS.gene066363 | MS.gene020723 | PPI |
| MS.gene066363 | MS.gene020722 | PPI |
| MS.gene066363 | MS.gene73491 | PPI |
| MS.gene066363 | MS.gene037762 | PPI |
| MS.gene066363 | MS.gene81790 | PPI |
| MS.gene066363 | MS.gene80759 | PPI |
| MS.gene066363 | MS.gene81379 | PPI |
| MS.gene066363 | MS.gene63889 | PPI |
| MS.gene066363 | MS.gene061817 | PPI |
| MS.gene066363 | MS.gene072037 | PPI |
| MS.gene066363 | MS.gene073516 | PPI |
| MS.gene066363 | MS.gene002068 | PPI |
| MS.gene066363 | MS.gene00641 | PPI |
| MS.gene066363 | MS.gene047179 | PPI |
| MS.gene066363 | MS.gene48056 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066363.t1 | MTR_4g120220 | 97.430 | 467 | 12 | 0 | 1 | 467 | 54 | 520 | 0.0 | 938 |
| MS.gene066363.t1 | MTR_8g018770 | 26.509 | 464 | 294 | 15 | 18 | 464 | 110 | 543 | 4.32e-36 | 140 |
| MS.gene066363.t1 | MTR_1g091037 | 26.923 | 416 | 277 | 9 | 41 | 450 | 217 | 611 | 2.03e-32 | 130 |
| MS.gene066363.t1 | MTR_1g091037 | 26.923 | 416 | 277 | 9 | 41 | 450 | 225 | 619 | 2.08e-32 | 130 |
| MS.gene066363.t1 | MTR_1g111140 | 28.538 | 431 | 286 | 8 | 36 | 464 | 60 | 470 | 7.39e-30 | 121 |
| MS.gene066363.t1 | MTR_2g006820 | 32.035 | 231 | 149 | 5 | 237 | 466 | 230 | 453 | 7.02e-23 | 101 |
| MS.gene066363.t1 | MTR_5g093300 | 32.035 | 231 | 149 | 5 | 237 | 466 | 232 | 455 | 7.54e-23 | 101 |
| MS.gene066363.t1 | MTR_1g096240 | 28.526 | 312 | 190 | 5 | 157 | 464 | 175 | 457 | 1.32e-22 | 100 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene066363.t1 | AT3G06850 | 61.488 | 457 | 141 | 5 | 11 | 467 | 62 | 483 | 0.0 | 548 |
| MS.gene066363.t1 | AT3G06850 | 61.488 | 457 | 141 | 5 | 11 | 467 | 62 | 483 | 0.0 | 548 |
| MS.gene066363.t1 | AT3G13930 | 27.629 | 485 | 289 | 20 | 2 | 464 | 95 | 539 | 9.56e-37 | 142 |
| MS.gene066363.t1 | AT1G54220 | 27.468 | 466 | 286 | 17 | 18 | 464 | 107 | 539 | 1.00e-36 | 142 |
| MS.gene066363.t1 | AT1G54220 | 27.468 | 466 | 286 | 17 | 18 | 464 | 107 | 539 | 1.00e-36 | 142 |
| MS.gene066363.t1 | AT3G25860 | 27.273 | 429 | 297 | 7 | 36 | 464 | 67 | 480 | 1.33e-31 | 127 |
| MS.gene066363.t1 | AT3G52200 | 27.586 | 464 | 298 | 14 | 12 | 464 | 201 | 637 | 6.96e-31 | 126 |
| MS.gene066363.t1 | AT3G52200 | 27.586 | 464 | 298 | 14 | 12 | 464 | 277 | 713 | 8.46e-31 | 126 |
| MS.gene066363.t1 | AT4G26910 | 30.882 | 204 | 135 | 4 | 265 | 466 | 166 | 365 | 1.28e-22 | 99.4 |
| MS.gene066363.t1 | AT1G34430 | 24.945 | 457 | 273 | 10 | 36 | 464 | 51 | 465 | 4.30e-22 | 99.0 |
| MS.gene066363.t1 | AT4G26910 | 30.882 | 204 | 135 | 4 | 265 | 466 | 265 | 464 | 5.64e-22 | 98.6 |
| MS.gene066363.t1 | AT4G26910 | 30.882 | 204 | 135 | 4 | 265 | 466 | 264 | 463 | 5.71e-22 | 98.6 |
| MS.gene066363.t1 | AT5G55070 | 29.268 | 205 | 137 | 4 | 265 | 466 | 265 | 464 | 1.13e-21 | 97.8 |
| MS.gene066363.t1 | AT5G55070 | 29.268 | 205 | 137 | 4 | 265 | 466 | 265 | 464 | 1.13e-21 | 97.8 |
Find 0 sgRNAs with CRISPR-Local
Find 251 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAAATTTAGAAATTAGTA+GGG | - | 32567:11412-11431 | MS.gene066363:CDS | 10.0% |
| !! | TTATAAATTTAGAAATTAGT+AGG | - | 32567:11411-11430 | MS.gene066363:CDS | 10.0% |
| !!! | AAAATATTCTTTAAAAATCA+TGG | - | 32567:13433-13452 | MS.gene066363:intron | 10.0% |
| !!! | AAGAAAATAATTTTCTTATT+AGG | - | 32567:12723-12742 | MS.gene066363:intron | 10.0% |
| !!! | AATGATTTATTATGTTATTT+TGG | - | 32567:11199-11218 | MS.gene066363:intron | 10.0% |
| !! | ATCAATCAATATCTTTAATA+GGG | + | 32567:12067-12086 | None:intergenic | 15.0% |
| !! | CATATAATATGAATATGATA+AGG | + | 32567:12778-12797 | None:intergenic | 15.0% |
| !! | CCTATTTATACTTATAATTT+GGG | + | 32567:11890-11909 | None:intergenic | 15.0% |
| !! | TCCTATTTATACTTATAATT+TGG | + | 32567:11891-11910 | None:intergenic | 15.0% |
| !!! | ATTTATTATGTTATTTTGGT+AGG | - | 32567:11203-11222 | MS.gene066363:intron | 15.0% |
| !!! | TATTGTTGTTTTTTTTAATG+TGG | + | 32567:14153-14172 | None:intergenic | 15.0% |
| !!! | TTTATTATGTTATTTTGGTA+GGG | - | 32567:11204-11223 | MS.gene066363:intron | 15.0% |
| !! | ATCACAATATAAATTTGACA+CGG | - | 32567:13660-13679 | MS.gene066363:intron | 20.0% |
| !! | ATGCGAAAAATAAATATGAT+AGG | - | 32567:12457-12476 | MS.gene066363:intron | 20.0% |
| !! | ATTAATCAAATCACTATCAA+TGG | - | 32567:13210-13229 | MS.gene066363:CDS | 20.0% |
| !! | ATTTATTATGATGATTTGAG+TGG | - | 32567:14249-14268 | MS.gene066363:intron | 20.0% |
| !! | CATCAATCAATATCTTTAAT+AGG | + | 32567:12068-12087 | None:intergenic | 20.0% |
| !! | CCCAAATTATAAGTATAAAT+AGG | - | 32567:11887-11906 | MS.gene066363:intron | 20.0% |
| !! | GATAGTGATTTGATTAATAT+TGG | + | 32567:13208-13227 | None:intergenic | 20.0% |
| !! | TAAGTATTTCAATAGTTTGA+AGG | - | 32567:12936-12955 | MS.gene066363:CDS | 20.0% |
| !! | TAATATAAAAGAGTTGGATA+AGG | + | 32567:12805-12824 | None:intergenic | 20.0% |
| !! | TCTTCAATGATTATAGTTAA+TGG | - | 32567:14174-14193 | MS.gene066363:intron | 20.0% |
| !! | TGTCAAATTTATATTGTGAT+AGG | + | 32567:13660-13679 | None:intergenic | 20.0% |
| !! | TGTTTATATGGCATTTATTT+GGG | - | 32567:11676-11695 | MS.gene066363:CDS | 20.0% |
| !! | TTCTATGATAAAAAAACAGA+AGG | + | 32567:13612-13631 | None:intergenic | 20.0% |
| !! | TTTATTATGATGATTTGAGT+GGG | - | 32567:14250-14269 | MS.gene066363:intron | 20.0% |
| !!! | AAATATATTTGAGCTTCTTT+TGG | - | 32567:12019-12038 | MS.gene066363:intron | 20.0% |
| !!! | AATATATTTGAGCTTCTTTT+GGG | - | 32567:12020-12039 | MS.gene066363:intron | 20.0% |
| !!! | CTAATATGTATATTGATTTC+TGG | - | 32567:13543-13562 | MS.gene066363:intron | 20.0% |
| !!! | GACTGAACATTTTTTATATT+CGG | + | 32567:13754-13773 | None:intergenic | 20.0% |
| !!! | GTATTTTTAAACATGTTTGA+GGG | - | 32567:11513-11532 | MS.gene066363:CDS | 20.0% |
| !!! | TGTATTTTTAAACATGTTTG+AGG | - | 32567:11512-11531 | MS.gene066363:CDS | 20.0% |
| !!! | TTATACTTATAATTTGGGTT+TGG | + | 32567:11885-11904 | None:intergenic | 20.0% |
| !!! | TTATTATGTTATTTTGGTAG+GGG | - | 32567:11205-11224 | MS.gene066363:intron | 20.0% |
| !!! | TTTAATTTGAAGCATGTTAA+GGG | - | 32567:10978-10997 | MS.gene066363:CDS | 20.0% |
| !!! | TTTTTATCATAGAATTCACA+AGG | - | 32567:13618-13637 | MS.gene066363:intron | 20.0% |
| ! | AAAACCATAAATAACCATAC+AGG | + | 32567:13835-13854 | None:intergenic | 25.0% |
| ! | AAAGTTTCTAATATTCTGCA+TGG | - | 32567:11309-11328 | MS.gene066363:intron | 25.0% |
| ! | AACTTGAATTATAAAGACCT+TGG | - | 32567:12984-13003 | MS.gene066363:CDS | 25.0% |
| ! | AATAGGAATAATTGTTGAGA+AGG | - | 32567:11904-11923 | MS.gene066363:intron | 25.0% |
| ! | AGAAGCTCAAATATATTTGA+TGG | + | 32567:12017-12036 | None:intergenic | 25.0% |
| ! | AGCATAGTAATTCAATTTGA+AGG | + | 32567:13525-13544 | None:intergenic | 25.0% |
| ! | ATCTAGTTAAAATCTTGTCA+TGG | - | 32567:12661-12680 | MS.gene066363:intron | 25.0% |
| ! | ATTGATATAAATGAAGTCTG+TGG | - | 32567:12297-12316 | MS.gene066363:CDS | 25.0% |
| ! | ATTTGATGGAAATAATGCAT+TGG | + | 32567:12003-12022 | None:intergenic | 25.0% |
| ! | GACACATAATATAAAAGAGT+TGG | + | 32567:12811-12830 | None:intergenic | 25.0% |
| ! | GATATGAAATTTCATTCTGT+CGG | - | 32567:11355-11374 | MS.gene066363:CDS | 25.0% |
| ! | GTGATTTGATTAATATTGGA+AGG | + | 32567:13204-13223 | None:intergenic | 25.0% |
| ! | GTGTTTATATGGCATTTATT+TGG | - | 32567:11675-11694 | MS.gene066363:CDS | 25.0% |
| ! | TGAATATAAGGTTTCTTTCT+TGG | - | 32567:13385-13404 | MS.gene066363:intron | 25.0% |
| ! | TTCTCATAAGACTTAGTAAA+GGG | + | 32567:12861-12880 | None:intergenic | 25.0% |
| !! | ATTCTTTAAAAATCATGGTG+AGG | - | 32567:13438-13457 | MS.gene066363:intron | 25.0% |
| !! | ATTTTTGCAGAGTGAATATA+AGG | - | 32567:13373-13392 | MS.gene066363:intron | 25.0% |
| !! | TGCTTTCTATTCTTTTTGTA+GGG | - | 32567:13030-13049 | MS.gene066363:CDS | 25.0% |
| !! | TTAATAGCAGTGTTGTTAAA+TGG | - | 32567:11545-11564 | MS.gene066363:intron | 25.0% |
| !! | TTGCTTTCTATTCTTTTTGT+AGG | - | 32567:13029-13048 | MS.gene066363:CDS | 25.0% |
| !! | TTTACTAAGTCTTATGAGAA+GGG | - | 32567:12861-12880 | MS.gene066363:intron | 25.0% |
| !!! | ATGCATTCATTTTTACCTAA+GGG | + | 32567:12505-12524 | None:intergenic | 25.0% |
| !!! | TATGCATTCATTTTTACCTA+AGG | + | 32567:12506-12525 | None:intergenic | 25.0% |
| !!! | TATTATGTTATTTTGGTAGG+GGG | - | 32567:11206-11225 | MS.gene066363:intron | 25.0% |
| !!! | TGACAAGATTTTAACTAGAT+AGG | + | 32567:12661-12680 | None:intergenic | 25.0% |
| AAATTTCATTCTGTCGGTAA+TGG | - | 32567:11361-11380 | MS.gene066363:CDS | 30.0% | |
| AAGAACCTAGATTCTGATAT+TGG | - | 32567:12210-12229 | MS.gene066363:CDS | 30.0% | |
| AATAATTGTTGAGAAGGAGA+GGG | - | 32567:11910-11929 | MS.gene066363:intron | 30.0% | |
| AATTAGTAGGGTACATACAT+TGG | - | 32567:11424-11443 | MS.gene066363:CDS | 30.0% | |
| ACAATCACTTTGAGTAACAT+TGG | - | 32567:13945-13964 | MS.gene066363:intron | 30.0% | |
| AGATTCAGCAATCATCTATA+AGG | + | 32567:14213-14232 | None:intergenic | 30.0% | |
| AGTTAAAATCTTGTCATGGA+TGG | - | 32567:12665-12684 | MS.gene066363:intron | 30.0% | |
| ATCAGCAATACTACTTAAGA+GGG | - | 32567:11707-11726 | MS.gene066363:intron | 30.0% | |
| CAATATAAATTTGACACGGT+AGG | - | 32567:13664-13683 | MS.gene066363:intron | 30.0% | |
| CCTGAAAATGAGTTTATAAG+TGG | - | 32567:11813-11832 | MS.gene066363:intron | 30.0% | |
| CGTCTACATAATGAAAATGT+GGG | + | 32567:13102-13121 | None:intergenic | 30.0% | |
| CTAACTCAACATTACAAAAC+CGG | + | 32567:11861-11880 | None:intergenic | 30.0% | |
| CTAGATTCTGATATTGGAAA+GGG | - | 32567:12216-12235 | MS.gene066363:CDS | 30.0% | |
| CTTCTCATAAGACTTAGTAA+AGG | + | 32567:12862-12881 | None:intergenic | 30.0% | |
| GCAGACTCATTAACAAATAT+CGG | + | 32567:12153-12172 | None:intergenic | 30.0% | |
| GGTATTATTCAGTAAGACAA+TGG | - | 32567:11382-11401 | MS.gene066363:CDS | 30.0% | |
| TAGATTCTGATATTGGAAAG+GGG | - | 32567:12217-12236 | MS.gene066363:CDS | 30.0% | |
| TCGTCTACATAATGAAAATG+TGG | + | 32567:13103-13122 | None:intergenic | 30.0% | |
| TCTTGGATCTCAAATATCTA+GGG | - | 32567:11948-11967 | MS.gene066363:intron | 30.0% | |
| TTAAACATGTTTGAGGGAAT+GGG | - | 32567:11519-11538 | MS.gene066363:CDS | 30.0% | |
| TTCAGAACTATCAAACTTCA+AGG | + | 32567:13354-13373 | None:intergenic | 30.0% | |
| TTTAAACATGTTTGAGGGAA+TGG | - | 32567:11518-11537 | MS.gene066363:CDS | 30.0% | |
| ! | CCACTTATAAACTCATTTTC+AGG | + | 32567:11816-11835 | None:intergenic | 30.0% |
| ! | CTTTACTAAGTCTTATGAGA+AGG | - | 32567:12860-12879 | MS.gene066363:intron | 30.0% |
| ! | GCTTTCTATTCTTTTTGTAG+GGG | - | 32567:13031-13050 | MS.gene066363:CDS | 30.0% |
| ! | TTACTAAGTCTTATGAGAAG+GGG | - | 32567:12862-12881 | MS.gene066363:intron | 30.0% |
| !! | CTTCTTTTGGGTAAAATTTC+AGG | - | 32567:12032-12051 | MS.gene066363:intron | 30.0% |
| !! | GTTAATTTGCATACATGACA+AGG | + | 32567:13503-13522 | None:intergenic | 30.0% |
| !! | TCAATTTTGCTGTCAAGAAA+GGG | - | 32567:12358-12377 | MS.gene066363:intron | 30.0% |
| !! | TGCATTCATTTTTACCTAAG+GGG | + | 32567:12504-12523 | None:intergenic | 30.0% |
| !! | TTCTGCTTTCAGGTTAATAT+TGG | - | 32567:14310-14329 | MS.gene066363:CDS | 30.0% |
| !! | TTTTGGGTAAAATTTCAGGT+TGG | - | 32567:12036-12055 | MS.gene066363:intron | 30.0% |
| !!! | TGATTCTTTTTTCTGCTTTC+AGG | - | 32567:14300-14319 | MS.gene066363:CDS | 30.0% |
| AAATCATGGTGAGGTTAAAC+AGG | - | 32567:13447-13466 | MS.gene066363:intron | 35.0% | |
| ACAAATATCGGATCAGAATC+AGG | + | 32567:12141-12160 | None:intergenic | 35.0% | |
| ACGGTAGGCTAATTTGATAT+AGG | - | 32567:13679-13698 | MS.gene066363:intron | 35.0% | |
| AGATAACAAGTTAAGTTCCG+AGG | - | 32567:13908-13927 | MS.gene066363:intron | 35.0% | |
| AGATAGGCCGAATATGATAA+GGG | + | 32567:12645-12664 | None:intergenic | 35.0% | |
| AGTTCTACAACTGAGAGTAA+AGG | + | 32567:12968-12987 | None:intergenic | 35.0% | |
| ATAAATGAAGTCTGTGGAAC+TGG | - | 32567:12303-12322 | MS.gene066363:CDS | 35.0% | |
| ATAATTGTTGAGAAGGAGAG+GGG | - | 32567:11911-11930 | MS.gene066363:intron | 35.0% | |
| ATCGCCTGTATGGTTATTTA+TGG | - | 32567:13828-13847 | MS.gene066363:intron | 35.0% | |
| CAGAATGTGAACTTCTCAAA+TGG | - | 32567:11087-11106 | MS.gene066363:intron | 35.0% | |
| CATCAGCAATACTACTTAAG+AGG | - | 32567:11706-11725 | MS.gene066363:intron | 35.0% | |
| CCTAGATTCTGATATTGGAA+AGG | - | 32567:12215-12234 | MS.gene066363:CDS | 35.0% | |
| CCTTTCCAATATCAGAATCT+AGG | + | 32567:12218-12237 | None:intergenic | 35.0% | |
| CTCTTAAGTAGTATTGCTGA+TGG | + | 32567:11708-11727 | None:intergenic | 35.0% | |
| CTTGGATCTCAAATATCTAG+GGG | - | 32567:11949-11968 | MS.gene066363:intron | 35.0% | |
| GAATAATTGTTGAGAAGGAG+AGG | - | 32567:11909-11928 | MS.gene066363:intron | 35.0% | |
| GATATAGGTTCACACAACAT+TGG | - | 32567:13694-13713 | MS.gene066363:intron | 35.0% | |
| GATGATTGCTGAATCTATGT+TGG | - | 32567:14217-14236 | MS.gene066363:intron | 35.0% | |
| GATGGTAAAATCAATGTCTC+TGG | - | 32567:13066-13085 | MS.gene066363:CDS | 35.0% | |
| GCCACAATGATGTGTTTATA+TGG | - | 32567:11664-11683 | MS.gene066363:CDS | 35.0% | |
| GCCATATAAACACATCATTG+TGG | + | 32567:11668-11687 | None:intergenic | 35.0% | |
| GTCTTGGATCTCAAATATCT+AGG | - | 32567:11947-11966 | MS.gene066363:intron | 35.0% | |
| TAAAATCTTGTCATGGATGG+AGG | - | 32567:12668-12687 | MS.gene066363:intron | 35.0% | |
| TAAATATGATAGGCCTTCTG+AGG | - | 32567:12467-12486 | MS.gene066363:intron | 35.0% | |
| TAGATAGGCCGAATATGATA+AGG | + | 32567:12646-12665 | None:intergenic | 35.0% | |
| TCTCAAATGGTATGTTCAAG+AGG | - | 32567:11100-11119 | MS.gene066363:intron | 35.0% | |
| TGAAGTCATTCTCAAAGGTT+TGG | - | 32567:13282-13301 | MS.gene066363:CDS | 35.0% | |
| TGTTCAGTCTCTTTCCATAT+TGG | - | 32567:13765-13784 | MS.gene066363:intron | 35.0% | |
| TTAAGTAGTATTGCTGATGG+CGG | + | 32567:11705-11724 | None:intergenic | 35.0% | |
| TTAAGTTCCGAGGATATATG+TGG | - | 32567:13918-13937 | MS.gene066363:intron | 35.0% | |
| TTAGTAAAGGGTCTGTTTGA+TGG | + | 32567:12849-12868 | None:intergenic | 35.0% | |
| TTCAGCAATCATCTATAAGG+CGG | + | 32567:14210-14229 | None:intergenic | 35.0% | |
| TTGAGTAACATTGGAGCAAT+TGG | - | 32567:13954-13973 | MS.gene066363:intron | 35.0% | |
| TTGTAAGCTAACCTCCAATA+TGG | + | 32567:13782-13801 | None:intergenic | 35.0% | |
| ! | GCATTTGAAGTCATTCTCAA+AGG | - | 32567:13277-13296 | MS.gene066363:CDS | 35.0% |
| ! | GTTTGGTTCGTCTACATAAT+TGG | - | 32567:13299-13318 | MS.gene066363:CDS | 35.0% |
| ! | TACATGAATTTGAAGCCACT+CGG | - | 32567:12524-12543 | MS.gene066363:intron | 35.0% |
| ! | TTGATTTTACCATCGCTCTT+TGG | + | 32567:13060-13079 | None:intergenic | 35.0% |
| ! | TTTTTCTGCTCAACCTGTTT+TGG | - | 32567:11007-11026 | MS.gene066363:CDS | 35.0% |
| !! | CGGTTTTGTAATGTTGAGTT+AGG | - | 32567:11859-11878 | MS.gene066363:intron | 35.0% |
| !! | CTCAATTTTGCTGTCAAGAA+AGG | - | 32567:12357-12376 | MS.gene066363:intron | 35.0% |
| !! | CTTAAGAGGGTTAGTTAGTT+AGG | - | 32567:11720-11739 | MS.gene066363:intron | 35.0% |
| AAACACATCATTGTGGCCTA+TGG | + | 32567:11661-11680 | None:intergenic | 40.0% | |
| AAATGCAACACGAGTAACTC+TGG | + | 32567:14409-14428 | None:intergenic | 40.0% | |
| AACTTTCTGAATTCGTCCCA+TGG | + | 32567:14030-14049 | None:intergenic | 40.0% | |
| ACACAACATTGGAATTGCGA+TGG | - | 32567:13705-13724 | MS.gene066363:intron | 40.0% | |
| AGATAACCAAAGAGCTAGCA+AGG | - | 32567:13868-13887 | MS.gene066363:intron | 40.0% | |
| AGTAACATTGGAGCAATTGG+TGG | - | 32567:13957-13976 | MS.gene066363:intron | 40.0% | |
| AGTTAACCTTCTCATGACCA+AGG | + | 32567:13004-13023 | None:intergenic | 40.0% | |
| ATATATGCACATCGCCTGTA+TGG | - | 32567:13818-13837 | MS.gene066363:intron | 40.0% | |
| ATCCCTTCACAAATTGCCTA+TGG | + | 32567:11622-11641 | None:intergenic | 40.0% | |
| ATGGCAATAATAGCGACTTC+GGG | + | 32567:14011-14030 | None:intergenic | 40.0% | |
| CACCATAGGCAATTTGTGAA+GGG | - | 32567:11617-11636 | MS.gene066363:intron | 40.0% | |
| CATGGCAATAATAGCGACTT+CGG | + | 32567:14012-14031 | None:intergenic | 40.0% | |
| GAAATTACGAGTCGCTACAA+AGG | - | 32567:11285-11304 | MS.gene066363:intron | 40.0% | |
| GAAGTCGCTATTATTGCCAT+GGG | - | 32567:14011-14030 | MS.gene066363:intron | 40.0% | |
| GATAGGCCGAATATGATAAG+GGG | + | 32567:12644-12663 | None:intergenic | 40.0% | |
| GCATTCTTCACTCTACAAAC+CGG | - | 32567:11839-11858 | MS.gene066363:intron | 40.0% | |
| GGTTTAAAAATCAGCAGGAC+AGG | - | 32567:12698-12717 | MS.gene066363:intron | 40.0% | |
| GTACATACATTGGTGTGAGA+GGG | - | 32567:11434-11453 | MS.gene066363:CDS | 40.0% | |
| GTGTGCTTGACATCTGTATA+AGG | + | 32567:13178-13197 | None:intergenic | 40.0% | |
| TAAAGACCTTGGTCATGAGA+AGG | - | 32567:12995-13014 | MS.gene066363:CDS | 40.0% | |
| TACATACATTGGTGTGAGAG+GGG | - | 32567:11435-11454 | MS.gene066363:CDS | 40.0% | |
| TCACTTTGAACTTCACAGAG+TGG | + | 32567:11252-11271 | None:intergenic | 40.0% | |
| TCAGTCTCTTTCCATATTGG+AGG | - | 32567:13768-13787 | MS.gene066363:intron | 40.0% | |
| TCCTGTCCCCTTATCATATT+CGG | - | 32567:12635-12654 | MS.gene066363:intron | 40.0% | |
| TCTAATATTCTGCATGGTCC+TGG | - | 32567:11315-11334 | MS.gene066363:intron | 40.0% | |
| TGGAACTGGAAAAGATGGAA+GGG | - | 32567:12317-12336 | MS.gene066363:CDS | 40.0% | |
| TTCTATCAACACCTGCTGTA+AGG | - | 32567:12253-12272 | MS.gene066363:CDS | 40.0% | |
| TTGAAGCAACTGTTCACAGA+GGG | + | 32567:13250-13269 | None:intergenic | 40.0% | |
| TTTCCATCATCAGTAAACCG+CGG | + | 32567:14053-14072 | None:intergenic | 40.0% | |
| ! | AGGTCTTATCTCAGCAAATG+TGG | + | 32567:11796-11815 | None:intergenic | 40.0% |
| ! | GAACATAGTTGATGTCCCTT+TGG | - | 32567:11043-11062 | MS.gene066363:CDS | 40.0% |
| ! | GTGTTGTTAAATGGCCACAA+TGG | - | 32567:11554-11573 | MS.gene066363:intron | 40.0% |
| ! | TAAGTCTTATGAGAAGGGGA+TGG | - | 32567:12866-12885 | MS.gene066363:intron | 40.0% |
| ! | TTGCAAGATTTTGCAACGAG+TGG | - | 32567:14365-14384 | MS.gene066363:CDS | 40.0% |
| ! | TTTGAAGCAACTGTTCACAG+AGG | + | 32567:13251-13270 | None:intergenic | 40.0% |
| !! | AGGCTGGTTTAAAAATCAGC+AGG | - | 32567:12693-12712 | MS.gene066363:intron | 40.0% |
| !! | GATTTTGGAGAACAGCTTCA+GGG | - | 32567:12414-12433 | MS.gene066363:intron | 40.0% |
| !! | TCATTAGCCTATTGGCTCTT+TGG | - | 32567:13476-13495 | MS.gene066363:intron | 40.0% |
| !! | TGATTTTGGAGAACAGCTTC+AGG | - | 32567:12413-12432 | MS.gene066363:intron | 40.0% |
| !!! | GCTGTTTTGCATGCTGATTT+TGG | - | 32567:12399-12418 | MS.gene066363:intron | 40.0% |
| AAAGTCGTTGAAGGACATGC+AGG | + | 32567:12093-12112 | None:intergenic | 45.0% | |
| ACAAGGACCAAAGAGCCAAT+AGG | + | 32567:13486-13505 | None:intergenic | 45.0% | |
| ACTTCGGGCAGATTAAGAAG+TGG | + | 32567:13996-14015 | None:intergenic | 45.0% | |
| AGTTCCGAGGATATATGTGG+TGG | - | 32567:13921-13940 | MS.gene066363:intron | 45.0% | |
| ATTGGAAAGGGGAAACAAGC+AGG | - | 32567:12228-12247 | MS.gene066363:CDS | 45.0% | |
| CCACCATAGGCAATTTGTGA+AGG | - | 32567:11616-11635 | MS.gene066363:intron | 45.0% | |
| CCTTCACAAATTGCCTATGG+TGG | + | 32567:11619-11638 | None:intergenic | 45.0% | |
| CGAAGTCGCTATTATTGCCA+TGG | - | 32567:14010-14029 | MS.gene066363:intron | 45.0% | |
| CGAGATAAATTGTGATGCCC+TGG | - | 32567:13120-13139 | MS.gene066363:CDS | 45.0% | |
| CTTACAGTCATGAGTGATGC+AGG | + | 32567:14083-14102 | None:intergenic | 45.0% | |
| CTTCGGGCAGATTAAGAAGT+GGG | + | 32567:13995-14014 | None:intergenic | 45.0% | |
| GACGAATTCAGAAAGTTCCG+CGG | - | 32567:14033-14052 | MS.gene066363:intron | 45.0% | |
| GAGTCACCAAAAGTCGTTGA+AGG | + | 32567:12102-12121 | None:intergenic | 45.0% | |
| GATAAATTGTGATGCCCTGG+TGG | - | 32567:13123-13142 | MS.gene066363:CDS | 45.0% | |
| GCTAGCAAGGTTGCAACAAT+TGG | - | 32567:13881-13900 | MS.gene066363:intron | 45.0% | |
| GGAGCAATTGGTGGAAAGTT+TGG | - | 32567:13966-13985 | MS.gene066363:intron | 45.0% | |
| GGGTTCATTTGGTAGAGTCT+TGG | - | 32567:11931-11950 | MS.gene066363:intron | 45.0% | |
| GGTACATACATTGGTGTGAG+AGG | - | 32567:11433-11452 | MS.gene066363:CDS | 45.0% | |
| GTCTGTGGAACTGGAAAAGA+TGG | - | 32567:12312-12331 | MS.gene066363:CDS | 45.0% | |
| GTGGAACTGGAAAAGATGGA+AGG | - | 32567:12316-12335 | MS.gene066363:CDS | 45.0% | |
| GTTCCGAGGATATATGTGGT+GGG | - | 32567:13922-13941 | MS.gene066363:intron | 45.0% | |
| TCAGCATGCAAAACAGCAGA+TGG | + | 32567:12396-12415 | None:intergenic | 45.0% | |
| TGAAGCAACTGTTCACAGAG+GGG | + | 32567:13249-13268 | None:intergenic | 45.0% | |
| TGCTGTAAGGAGTCTAGCAA+AGG | - | 32567:12266-12285 | MS.gene066363:CDS | 45.0% | |
| TGTCCCACCACATATATCCT+CGG | + | 32567:13928-13947 | None:intergenic | 45.0% | |
| TTCGGGCAGATTAAGAAGTG+GGG | + | 32567:13994-14013 | None:intergenic | 45.0% | |
| TTTGCTAGACTCCTTACAGC+AGG | + | 32567:12267-12286 | None:intergenic | 45.0% | |
| ! | GCATGTCCTTCAACGACTTT+TGG | - | 32567:12093-12112 | MS.gene066363:intron | 45.0% |
| ! | GCTTTTCTGTCAACCACCAT+AGG | - | 32567:11603-11622 | MS.gene066363:intron | 45.0% |
| ! | GGTTGCACTCATTAGCCTAT+TGG | - | 32567:13468-13487 | MS.gene066363:intron | 45.0% |
| ! | TTGCAACCTTGCTAGCTCTT+TGG | + | 32567:13877-13896 | None:intergenic | 45.0% |
| !! | ACCTGTTTTGGACATTCCTG+CGG | - | 32567:11019-11038 | MS.gene066363:CDS | 45.0% |
| ACATCAACTATGTTCCCCGC+AGG | + | 32567:11038-11057 | None:intergenic | 50.0% | |
| ACATTGGTGTGAGAGGGGTT+GGG | - | 32567:11440-11459 | MS.gene066363:CDS | 50.0% | |
| AGGACACGATACTTCCCCTT+AGG | - | 32567:12487-12506 | MS.gene066363:intron | 50.0% | |
| AGGAGTCTAGCAAAGGAGCA+TGG | - | 32567:12273-12292 | MS.gene066363:CDS | 50.0% | |
| ATTGCGATGGCAACACCACA+TGG | - | 32567:13718-13737 | MS.gene066363:intron | 50.0% | |
| CTGACCTTTACAATGTCGCC+AGG | + | 32567:11336-11355 | None:intergenic | 50.0% | |
| CTTCACCAGTCTGTGCCAAA+GGG | + | 32567:11061-11080 | None:intergenic | 50.0% | |
| GAACAGCTTCAGGGAGAAGA+AGG | - | 32567:12423-12442 | MS.gene066363:intron | 50.0% | |
| GAGAAGGAGAGGGGTTCATT+TGG | - | 32567:11920-11939 | MS.gene066363:intron | 50.0% | |
| GCAGATCACAGAGTCTTGGA+CGG | - | 32567:14334-14353 | MS.gene066363:CDS | 50.0% | |
| GCCGAATATGATAAGGGGAC+AGG | + | 32567:12639-12658 | None:intergenic | 50.0% | |
| GGCAATTTGTGAAGGGATGC+TGG | - | 32567:11624-11643 | MS.gene066363:CDS | 50.0% | |
| GTTCCGCGGTTTACTGATGA+TGG | - | 32567:14047-14066 | MS.gene066363:intron | 50.0% | |
| TACATTGGTGTGAGAGGGGT+TGG | - | 32567:11439-11458 | MS.gene066363:CDS | 50.0% | |
| TAGGGGATTCCAAAGAGCGA+TGG | - | 32567:13048-13067 | MS.gene066363:CDS | 50.0% | |
| TCTTGTCATGGATGGAGGTG+AGG | - | 32567:12673-12692 | MS.gene066363:intron | 50.0% | |
| TGGTCCTGGCGACATTGTAA+AGG | - | 32567:11329-11348 | MS.gene066363:CDS | 50.0% | |
| TGGTGCAGATCACAGAGTCT+TGG | - | 32567:14330-14349 | MS.gene066363:CDS | 50.0% | |
| TTCGGCACAACTAGACCATG+TGG | + | 32567:13736-13755 | None:intergenic | 50.0% | |
| ! | ATTTGAAGCCACTCGGTAGC+AGG | - | 32567:12531-12550 | MS.gene066363:intron | 50.0% |
| ! | TTTGAAGCCACTCGGTAGCA+GGG | - | 32567:12532-12551 | MS.gene066363:intron | 50.0% |
| !! | ACGACGTTTTAAGCTCCACC+AGG | + | 32567:13141-13160 | None:intergenic | 50.0% |
| !! | AGTAGTATTGCTGATGGCGG+AGG | + | 32567:11702-11721 | None:intergenic | 50.0% |
| !! | CCTGTTTTGGACATTCCTGC+GGG | - | 32567:11020-11039 | MS.gene066363:CDS | 50.0% |
| !! | CGACGTTTTAAGCTCCACCA+GGG | + | 32567:13140-13159 | None:intergenic | 50.0% |
| !! | CTGTTTTGGACATTCCTGCG+GGG | - | 32567:11021-11040 | MS.gene066363:CDS | 50.0% |
| !! | GGAAGTATCGTGTCCTCAGA+AGG | + | 32567:12483-12502 | None:intergenic | 50.0% |
| CCCGCAGGAATGTCCAAAAC+AGG | + | 32567:11023-11042 | None:intergenic | 55.0% | |
| CCTTCACCAGTCTGTGCCAA+AGG | + | 32567:11062-11081 | None:intergenic | 55.0% | |
| CCTTTGGCACAGACTGGTGA+AGG | - | 32567:11059-11078 | MS.gene066363:CDS | 55.0% | |
| CTCTTATCCCTGCTACCGAG+TGG | + | 32567:12542-12561 | None:intergenic | 55.0% | |
| GATGTCCCTTTGGCACAGAC+TGG | - | 32567:11053-11072 | MS.gene066363:CDS | 55.0% | |
| GTCACGCCATTCCTCCATAG+CGG | + | 32567:11582-11601 | None:intergenic | 55.0% | |
| TTGTGAAGGGATGCTGGCCA+TGG | - | 32567:11630-11649 | MS.gene066363:CDS | 55.0% | |
| !! | ATGGTGCCGCTATGGAGGAA+TGG | - | 32567:11573-11592 | MS.gene066363:intron | 55.0% |
| CCTCCATAGCGGCACCATTG+TGG | + | 32567:11571-11590 | None:intergenic | 60.0% | |
| GTCATGGATGGAGGTGAGGC+TGG | - | 32567:12677-12696 | MS.gene066363:intron | 60.0% | |
| TGAAGGGATGCTGGCCATGG+TGG | - | 32567:11633-11652 | MS.gene066363:CDS | 60.0% | |
| TTGGTGTGAGAGGGGTTGGG+AGG | - | 32567:11443-11462 | MS.gene066363:CDS | 60.0% | |
| !! | CCACAATGGTGCCGCTATGG+AGG | - | 32567:11568-11587 | MS.gene066363:intron | 60.0% |
| !! | TGGCCACAATGGTGCCGCTA+TGG | - | 32567:11565-11584 | MS.gene066363:intron | 60.0% |
| TGTGGCCTATGGCGCCACCA+TGG | + | 32567:11650-11669 | None:intergenic | 65.0% | |
| ! | GCTGGCCATGGTGGCGCCAT+AGG | - | 32567:11642-11661 | MS.gene066363:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 32567 | gene | 10978 | 14435 | 10978 | ID=MS.gene066363 |
| 32567 | mRNA | 10978 | 14435 | 10978 | ID=MS.gene066363.t1;Parent=MS.gene066363 |
| 32567 | exon | 14292 | 14435 | 14292 | ID=MS.gene066363.t1.exon1;Parent=MS.gene066363.t1 |
| 32567 | CDS | 14292 | 14435 | 14292 | ID=cds.MS.gene066363.t1;Parent=MS.gene066363.t1 |
| 32567 | exon | 14063 | 14188 | 14063 | ID=MS.gene066363.t1.exon2;Parent=MS.gene066363.t1 |
| 32567 | CDS | 14063 | 14188 | 14063 | ID=cds.MS.gene066363.t1;Parent=MS.gene066363.t1 |
| 32567 | exon | 12905 | 13359 | 12905 | ID=MS.gene066363.t1.exon3;Parent=MS.gene066363.t1 |
| 32567 | CDS | 12905 | 13359 | 12905 | ID=cds.MS.gene066363.t1;Parent=MS.gene066363.t1 |
| 32567 | exon | 12115 | 12362 | 12115 | ID=MS.gene066363.t1.exon4;Parent=MS.gene066363.t1 |
| 32567 | CDS | 12115 | 12362 | 12115 | ID=cds.MS.gene066363.t1;Parent=MS.gene066363.t1 |
| 32567 | exon | 11624 | 11712 | 11624 | ID=MS.gene066363.t1.exon5;Parent=MS.gene066363.t1 |
| 32567 | CDS | 11624 | 11712 | 11624 | ID=cds.MS.gene066363.t1;Parent=MS.gene066363.t1 |
| 32567 | exon | 11316 | 11543 | 11316 | ID=MS.gene066363.t1.exon6;Parent=MS.gene066363.t1 |
| 32567 | CDS | 11316 | 11543 | 11316 | ID=cds.MS.gene066363.t1;Parent=MS.gene066363.t1 |
| 32567 | exon | 10978 | 11091 | 10978 | ID=MS.gene066363.t1.exon7;Parent=MS.gene066363.t1 |
| 32567 | CDS | 10978 | 11091 | 10978 | ID=cds.MS.gene066363.t1;Parent=MS.gene066363.t1 |
| Gene Sequence |
| Protein sequence |
