Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06736.t1 | XP_003602215.1 | 99.7 | 358 | 1 | 0 | 1 | 358 | 1 | 358 | 1.70E-208 | 734.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06736.t1 | Q94BN2 | 80.3 | 350 | 67 | 2 | 8 | 356 | 8 | 356 | 1.1e-166 | 587.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06736.t1 | G7J6T4 | 99.7 | 358 | 1 | 0 | 1 | 358 | 1 | 358 | 1.2e-208 | 734.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052224 | MS.gene06736 | 0.833167 | 6.23E-56 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene06736 | MS.gene016160 | PPI |
| MS.gene051552 | MS.gene06736 | PPI |
| MS.gene42684 | MS.gene06736 | PPI |
| MS.gene42624 | MS.gene06736 | PPI |
| MS.gene014976 | MS.gene06736 | PPI |
| MS.gene06736 | MS.gene058418 | PPI |
| MS.gene32768 | MS.gene06736 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06736.t1 | MTR_3g091090 | 99.721 | 358 | 1 | 0 | 1 | 358 | 1 | 358 | 0.0 | 739 |
| MS.gene06736.t1 | MTR_1g028360 | 80.645 | 341 | 62 | 2 | 17 | 357 | 25 | 361 | 0.0 | 547 |
| MS.gene06736.t1 | MTR_5g034470 | 68.167 | 311 | 82 | 4 | 44 | 353 | 44 | 338 | 8.98e-160 | 451 |
| MS.gene06736.t1 | MTR_8g063940 | 66.019 | 309 | 90 | 3 | 45 | 353 | 44 | 337 | 7.13e-155 | 439 |
| MS.gene06736.t1 | MTR_5g034470 | 68.243 | 296 | 77 | 3 | 44 | 338 | 44 | 323 | 5.18e-152 | 432 |
| MS.gene06736.t1 | MTR_3g078190 | 58.719 | 281 | 92 | 4 | 75 | 350 | 50 | 311 | 2.88e-112 | 330 |
| MS.gene06736.t1 | MTR_5g006140 | 33.178 | 214 | 135 | 6 | 95 | 303 | 51 | 261 | 1.12e-32 | 124 |
| MS.gene06736.t1 | MTR_5g006140 | 33.019 | 212 | 134 | 6 | 95 | 301 | 51 | 259 | 1.81e-32 | 122 |
| MS.gene06736.t1 | MTR_1g015300 | 29.078 | 282 | 189 | 8 | 83 | 358 | 46 | 322 | 1.33e-29 | 116 |
| MS.gene06736.t1 | MTR_3g104960 | 28.704 | 216 | 137 | 7 | 95 | 305 | 60 | 263 | 1.22e-19 | 89.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06736.t1 | AT5G53120 | 80.286 | 350 | 67 | 2 | 8 | 356 | 8 | 356 | 0.0 | 559 |
| MS.gene06736.t1 | AT5G53120 | 80.286 | 350 | 67 | 2 | 8 | 356 | 8 | 356 | 0.0 | 559 |
| MS.gene06736.t1 | AT5G53120 | 80.286 | 350 | 67 | 2 | 8 | 356 | 8 | 356 | 0.0 | 559 |
| MS.gene06736.t1 | AT5G53120 | 80.286 | 350 | 67 | 2 | 8 | 356 | 8 | 356 | 0.0 | 559 |
| MS.gene06736.t1 | AT5G53120 | 80.286 | 350 | 67 | 2 | 8 | 356 | 8 | 356 | 0.0 | 559 |
| MS.gene06736.t1 | AT5G53120 | 80.286 | 350 | 67 | 2 | 8 | 356 | 25 | 373 | 0.0 | 558 |
| MS.gene06736.t1 | AT5G53120 | 72.414 | 377 | 75 | 4 | 8 | 356 | 8 | 383 | 0.0 | 550 |
| MS.gene06736.t1 | AT1G23820 | 66.775 | 307 | 86 | 2 | 44 | 350 | 36 | 326 | 2.55e-158 | 447 |
| MS.gene06736.t1 | AT1G70310 | 65.472 | 307 | 92 | 2 | 44 | 350 | 40 | 332 | 5.15e-154 | 437 |
| MS.gene06736.t1 | AT1G23820 | 60.839 | 286 | 92 | 2 | 14 | 293 | 44 | 315 | 6.66e-129 | 372 |
| MS.gene06736.t1 | AT5G19530 | 29.365 | 252 | 170 | 6 | 57 | 303 | 14 | 262 | 6.98e-33 | 125 |
| MS.gene06736.t1 | AT5G19530 | 29.365 | 252 | 170 | 6 | 57 | 303 | 21 | 269 | 1.01e-32 | 125 |
Find 97 sgRNAs with CRISPR-Local
Find 290 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTCACTCTACCGTTGTTTC+GGG | 0.194129 | 3.3:-76044717 | MS.gene06736:CDS |
| GTGGAGATGGTGGGGTTCTA+AGG | 0.243049 | 3.3:-76043413 | MS.gene06736:CDS |
| ATTTGTCGAGAAACATTTAA+AGG | 0.261361 | 3.3:-76041734 | MS.gene06736:CDS |
| TTGTCACTCTACCGTTGTTT+CGG | 0.279338 | 3.3:-76044718 | MS.gene06736:CDS |
| CGGTGGAGTTCTTTGTAATA+TGG | 0.303405 | 3.3:-76041804 | MS.gene06736:CDS |
| TCTTCTCTACTTTGATTGAA+TGG | 0.326205 | 3.3:+76044094 | None:intergenic |
| CCTTCCCATCCATAGTCTTC+TGG | 0.342826 | 3.3:+76044823 | None:intergenic |
| ATGGTTTCTCTACAAGTTCC+TGG | 0.346919 | 3.3:+76041858 | None:intergenic |
| CTTCTCTACTTTGATTGAAT+GGG | 0.348057 | 3.3:+76044095 | None:intergenic |
| TGGAGAGCATGTCTTGAATA+AGG | 0.362663 | 3.3:+76041756 | None:intergenic |
| TTAGTTGTTGGTGGTGGAGA+TGG | 0.363986 | 3.3:-76043426 | MS.gene06736:CDS |
| ATAAGCATCGGAGGAATCTT+AGG | 0.367711 | 3.3:-76040933 | MS.gene06736:CDS |
| TTTAAATGTTTCTCGACAAA+TGG | 0.372736 | 3.3:+76041736 | None:intergenic |
| TGACAATTGGCCTCCAACTC+AGG | 0.374602 | 3.3:+76044735 | None:intergenic |
| GGGAAAGTTCTTGTACTTGA+TGG | 0.375756 | 3.3:-76043930 | MS.gene06736:CDS |
| TTGGTATGCAGTGGTGTGAT+AGG | 0.380687 | 3.3:-76041036 | MS.gene06736:intron |
| GTTGTTGGTGGTGGAGATGG+TGG | 0.389147 | 3.3:-76043423 | MS.gene06736:CDS |
| TTGTTGGTGGTGGAGATGGT+GGG | 0.396225 | 3.3:-76043422 | MS.gene06736:CDS |
| GGCTTCAGCCCCTGAGTTGG+AGG | 0.399000 | 3.3:-76044745 | MS.gene06736:CDS |
| AATCCCATTGAAAAGTTAGA+AGG | 0.400616 | 3.3:-76040961 | MS.gene06736:CDS |
| TGGATGGGAAGGCGAGTAAC+AGG | 0.416616 | 3.3:-76044812 | MS.gene06736:CDS |
| ACGGCGTCATACCTCCCTTC+AGG | 0.420015 | 3.3:+76043025 | None:intergenic |
| GTCACTGTACCAAGAGGTCT+TGG | 0.430881 | 3.3:-76044055 | MS.gene06736:CDS |
| AACAGTCACCTGGCCACATT+GGG | 0.439358 | 3.3:+76044527 | None:intergenic |
| TTTGGAATGCCAGAAGACTA+TGG | 0.441748 | 3.3:-76044832 | MS.gene06736:CDS |
| GGCGAGTAACAGGAATGGTT+TGG | 0.443384 | 3.3:-76044802 | MS.gene06736:CDS |
| TTCTCTACAAGTTCCTGGGC+AGG | 0.463913 | 3.3:+76041863 | None:intergenic |
| GGAAAGTTCTTGTACTTGAT+GGG | 0.470422 | 3.3:-76043929 | MS.gene06736:CDS |
| TCAGCATCTCAAACTTGCTC+TGG | 0.472000 | 3.3:-76044687 | MS.gene06736:intron |
| TTCAACAACCCAATGTGGCC+AGG | 0.474309 | 3.3:-76044535 | MS.gene06736:intron |
| ACCTCATTCTTCAGAAATGC+AGG | 0.477276 | 3.3:+76040729 | None:intergenic |
| TGTTGGTGGTGGAGATGGTG+GGG | 0.479762 | 3.3:-76043421 | MS.gene06736:CDS |
| GGACGCCGTAGAAAGAGGTT+TGG | 0.482254 | 3.3:-76044850 | MS.gene06736:CDS |
| ATCTGAGGAATCAACAATTA+CGG | 0.484857 | 3.3:+76043006 | None:intergenic |
| TATTTGTGAGATAGATAAGA+TGG | 0.498631 | 3.3:-76043355 | MS.gene06736:CDS |
| GCATTCCAAACCTCTTTCTA+CGG | 0.502649 | 3.3:+76044845 | None:intergenic |
| AAGGTTCTGTACATTATGCA+TGG | 0.503330 | 3.3:-76041715 | MS.gene06736:CDS |
| GTAATATGGCAGAAAGTATG+TGG | 0.507464 | 3.3:-76041790 | MS.gene06736:CDS |
| CAACTCAGGGGCTGAAGCCA+TGG | 0.509823 | 3.3:+76044749 | None:intergenic |
| TTCATGTTGTTTGAAAGCCA+TGG | 0.510589 | 3.3:-76044766 | MS.gene06736:CDS |
| TGGAGATGGTGGGGTTCTAA+GGG | 0.514791 | 3.3:-76043412 | MS.gene06736:CDS |
| TGGTATGCAGTGGTGTGATA+GGG | 0.519393 | 3.3:-76041035 | MS.gene06736:intron |
| AAACTCTACCTTGGATATGT+TGG | 0.521419 | 3.3:+76041683 | None:intergenic |
| GAATGCCAGAAGACTATGGA+TGG | 0.522599 | 3.3:-76044828 | MS.gene06736:CDS |
| TAACAGTCACCTGGCCACAT+TGG | 0.523868 | 3.3:+76044526 | None:intergenic |
| AACAACGGTAGAGTGACAAT+TGG | 0.525820 | 3.3:+76044722 | None:intergenic |
| AAAGGATGAATGTGCTTACC+AGG | 0.527996 | 3.3:-76043889 | MS.gene06736:CDS |
| TTTCTTAAACGTGCACCTGA+AGG | 0.534171 | 3.3:-76043040 | MS.gene06736:CDS |
| GACAATTGGCCTCCAACTCA+GGG | 0.536122 | 3.3:+76044736 | None:intergenic |
| GGAGATGAGCTATCATCTCC+TGG | 0.549717 | 3.3:+76043871 | None:intergenic |
| TTCTTAAACGTGCACCTGAA+GGG | 0.550495 | 3.3:-76043039 | MS.gene06736:CDS |
| TGGTTTCTCTACAAGTTCCT+GGG | 0.552051 | 3.3:+76041859 | None:intergenic |
| TTTCTTCTATGCTCAACAGA+GGG | 0.553053 | 3.3:-76041012 | MS.gene06736:CDS |
| TCAAACCCAACAGCTAACTC+TGG | 0.559364 | 3.3:+76043234 | None:intergenic |
| CATGGCTTCAGCCCCTGAGT+TGG | 0.564808 | 3.3:-76044748 | MS.gene06736:CDS |
| TGTTGATTCCTCAGATCCTG+TGG | 0.566155 | 3.3:-76042999 | MS.gene06736:CDS |
| GGGACGGAATGGAACAGAGG+GGG | 0.567127 | 3.3:+76043850 | None:intergenic |
| CATATTACAAAGAACTCCAC+CGG | 0.568035 | 3.3:+76041805 | None:intergenic |
| TATGCTCCACAGAGCTGTGG+CGG | 0.569419 | 3.3:+76043382 | None:intergenic |
| AGGTTCTGTACATTATGCAT+GGG | 0.569562 | 3.3:-76041714 | MS.gene06736:CDS |
| TTGTAATTTAGGTCCTGCCC+AGG | 0.572216 | 3.3:-76041876 | MS.gene06736:intron |
| ATGCTCCACAGAGCTGTGGC+GGG | 0.576101 | 3.3:+76043383 | None:intergenic |
| CCAGAAGACTATGGATGGGA+AGG | 0.584299 | 3.3:-76044823 | MS.gene06736:CDS |
| TAACAGGAATGGTTTGGAGA+AGG | 0.585433 | 3.3:-76044796 | MS.gene06736:CDS |
| GATTGTTCAGTTGACTGAAA+AGG | 0.585805 | 3.3:-76043907 | MS.gene06736:CDS |
| TTACTCACCCACAGGATCTG+AGG | 0.608698 | 3.3:+76042991 | None:intergenic |
| TAGAAGGTGCTGATAAGCAT+CGG | 0.610775 | 3.3:-76040945 | MS.gene06736:CDS |
| ACTCTACCGTTGTTTCGGGG+TGG | 0.610888 | 3.3:-76044713 | MS.gene06736:CDS |
| GTACACTTGCATGTTGGTGA+TGG | 0.618204 | 3.3:-76043201 | MS.gene06736:intron |
| GTCACTCTACCGTTGTTTCG+GGG | 0.620935 | 3.3:-76044716 | MS.gene06736:CDS |
| GCCTGCATTTCTGAAGAATG+AGG | 0.621479 | 3.3:-76040730 | MS.gene06736:CDS |
| ATGGCTTTCAAACAACATGA+AGG | 0.623348 | 3.3:+76044768 | None:intergenic |
| CAAGCAAGCATTGCTACTGA+CGG | 0.624255 | 3.3:+76040697 | None:intergenic |
| TTTATTTCAACAACCCAATG+TGG | 0.626443 | 3.3:-76044540 | MS.gene06736:CDS |
| CAAGTGTTCCAACATATCCA+AGG | 0.643163 | 3.3:-76041691 | MS.gene06736:intron |
| CAATATGCTCCACAGAGCTG+TGG | 0.644313 | 3.3:+76043379 | None:intergenic |
| TTCTTCTATGCTCAACAGAG+GGG | 0.645049 | 3.3:-76041011 | MS.gene06736:CDS |
| GTTTCTTCTATGCTCAACAG+AGG | 0.646189 | 3.3:-76041013 | MS.gene06736:CDS |
| TTAAACGTGCACCTGAAGGG+AGG | 0.651100 | 3.3:-76043036 | MS.gene06736:CDS |
| TCTTATGCAGATACATACAG+CGG | 0.652959 | 3.3:-76040763 | MS.gene06736:intron |
| AGTATCCCGCCACAGCTCTG+TGG | 0.654087 | 3.3:-76043388 | MS.gene06736:CDS |
| GGGAAGGCGAGTAACAGGAA+TGG | 0.657558 | 3.3:-76044807 | MS.gene06736:CDS |
| GGGTTCACAAAATCAACATG+CGG | 0.658739 | 3.3:+76040988 | None:intergenic |
| ATATCTAAGGCATTAAGACC+CGG | 0.667528 | 3.3:-76041824 | MS.gene06736:CDS |
| CCTCGTGTACACTTGCATGT+TGG | 0.668273 | 3.3:-76043207 | MS.gene06736:CDS |
| AGAAAAGTCACTGTACCAAG+AGG | 0.670694 | 3.3:-76044061 | MS.gene06736:CDS |
| AATGCCAGAAGACTATGGAT+GGG | 0.672149 | 3.3:-76044827 | MS.gene06736:CDS |
| CCAACATGCAAGTGTACACG+AGG | 0.673468 | 3.3:+76043207 | None:intergenic |
| TGAGAACCACCCCGAAACAA+CGG | 0.682894 | 3.3:+76044707 | None:intergenic |
| GTTGATTCCTCAGATCCTGT+GGG | 0.684990 | 3.3:-76042998 | MS.gene06736:intron |
| ATATTACAAAGAACTCCACC+GGG | 0.685339 | 3.3:+76041806 | None:intergenic |
| GGGGACGGAATGGAACAGAG+GGG | 0.690224 | 3.3:+76043849 | None:intergenic |
| AAGGTGCTGATAAGCATCGG+AGG | 0.691606 | 3.3:-76040942 | MS.gene06736:CDS |
| TCTTAGGTTCTATAACTCAG+AGG | 0.692345 | 3.3:-76040917 | MS.gene06736:intron |
| ACAATTGGCCTCCAACTCAG+GGG | 0.704373 | 3.3:+76044737 | None:intergenic |
| TCTAAGGCATTAAGACCCGG+TGG | 0.707720 | 3.3:-76041821 | MS.gene06736:CDS |
| CATTTCTGAAGAATGAGGTG+AGG | 0.708001 | 3.3:-76040725 | MS.gene06736:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAGTAAATACAATATA+TGG | + | chr3.3:76044686-76044705 | None:intergenic | 10.0% |
| !!! | TAGTTCAATATAAATATTTT+AGG | + | chr3.3:76043558-76043577 | None:intergenic | 10.0% |
| !! | AAAATATTAAAGAATAGAGT+AGG | + | chr3.3:76041936-76041955 | None:intergenic | 15.0% |
| !! | TCTGATTTATCTATTTATTT+AGG | + | chr3.3:76042983-76043002 | None:intergenic | 15.0% |
| !! | TGAGTAATTTAAATTCAAAA+TGG | - | chr3.3:76042590-76042609 | MS.gene06736:intron | 15.0% |
| !!! | AATTTTTATGATGTTATTTC+AGG | - | chr3.3:76042114-76042133 | MS.gene06736:intron | 15.0% |
| !!! | ATATCTTTGAAAATAACTTT+TGG | - | chr3.3:76041285-76041304 | MS.gene06736:intron | 15.0% |
| !!! | CTTTGTTATAATTGAATTTT+TGG | - | chr3.3:76044349-76044368 | MS.gene06736:intron | 15.0% |
| !!! | TAATTTTTATGTGTATATGA+CGG | - | chr3.3:76041408-76041427 | MS.gene06736:intron | 15.0% |
| !!! | TTCTTTAAAAGTAAAATCAA+AGG | + | chr3.3:76043957-76043976 | None:intergenic | 15.0% |
| !! | AAACAATATGAAAGAAATCA+CGG | + | chr3.3:76043418-76043437 | None:intergenic | 20.0% |
| !! | ACACATAAAAATTACATACT+TGG | + | chr3.3:76041402-76041421 | None:intergenic | 20.0% |
| !! | CATAAAAATTATTTAGCAGA+CGG | + | chr3.3:76042104-76042123 | None:intergenic | 20.0% |
| !! | CATTACATGAAATTAATAAG+TGG | + | chr3.3:76043604-76043623 | None:intergenic | 20.0% |
| !! | GAATAAAAAGAGAACAATAT+AGG | + | chr3.3:76041559-76041578 | None:intergenic | 20.0% |
| !! | TTAGATATAGTCTCAAAAAA+TGG | + | chr3.3:76043729-76043748 | None:intergenic | 20.0% |
| !!! | AAATTTTGCAACAAAATATC+AGG | - | chr3.3:76044724-76044743 | MS.gene06736:CDS | 20.0% |
| !!! | ACTAAACATGATTGTAATTT+TGG | - | chr3.3:76044457-76044476 | MS.gene06736:intron | 20.0% |
| !!! | ATCAAAAGACTTTACATTTT+TGG | + | chr3.3:76041741-76041760 | None:intergenic | 20.0% |
| !!! | ATTGAATTTTTGGTTTAAGA+AGG | - | chr3.3:76044359-76044378 | MS.gene06736:intron | 20.0% |
| !!! | ATTTTAGGAACAAAAATTCA+GGG | + | chr3.3:76043543-76043562 | None:intergenic | 20.0% |
| !!! | ATTTTTTGAGACTATATCTA+AGG | - | chr3.3:76043728-76043747 | MS.gene06736:intron | 20.0% |
| !!! | CAATATCACTTTTGTAATTT+AGG | - | chr3.3:76043678-76043697 | MS.gene06736:intron | 20.0% |
| !!! | TATTTTAGGAACAAAAATTC+AGG | + | chr3.3:76043544-76043563 | None:intergenic | 20.0% |
| !!! | TCAAAAGACTTTACATTTTT+GGG | + | chr3.3:76041740-76041759 | None:intergenic | 20.0% |
| !!! | TTTCTTTCATATTGTTTTGT+TGG | - | chr3.3:76043421-76043440 | MS.gene06736:CDS | 20.0% |
| !!! | TTTTACAGTCATTAACATAT+GGG | - | chr3.3:76041615-76041634 | MS.gene06736:intron | 20.0% |
| !!! | TTTTTACAGTCATTAACATA+TGG | - | chr3.3:76041614-76041633 | MS.gene06736:intron | 20.0% |
| !!! | TTTTTTTACAGAAAAATCAG+AGG | - | chr3.3:76040996-76041015 | MS.gene06736:CDS | 20.0% |
| ! | AAATTGCTTAACTAGATCAT+TGG | - | chr3.3:76042792-76042811 | MS.gene06736:intron | 25.0% |
| ! | AACAAAAATTCAGGGAAAAT+CGG | + | chr3.3:76043535-76043554 | None:intergenic | 25.0% |
| ! | ACAAAATATTGAAGTAACGT+TGG | - | chr3.3:76041810-76041829 | MS.gene06736:CDS | 25.0% |
| ! | ACAAAATTTGTGATTATGGT+TGG | - | chr3.3:76044102-76044121 | MS.gene06736:CDS | 25.0% |
| ! | ATCAAACTTACTACATATTG+AGG | - | chr3.3:76041343-76041362 | MS.gene06736:intron | 25.0% |
| ! | ATGAAATGAACTTATTGCAA+TGG | - | chr3.3:76042279-76042298 | MS.gene06736:intron | 25.0% |
| ! | ATGACTTTAGATTGTTTCAT+TGG | - | chr3.3:76043340-76043359 | MS.gene06736:intron | 25.0% |
| ! | ATGGTTATTGATGTAAGTTA+TGG | - | chr3.3:76042229-76042248 | MS.gene06736:intron | 25.0% |
| ! | ATTTGTCGAGAAACATTTAA+AGG | - | chr3.3:76043831-76043850 | MS.gene06736:intron | 25.0% |
| ! | CAGTAAATAATGCACATTAT+TGG | - | chr3.3:76042628-76042647 | MS.gene06736:intron | 25.0% |
| ! | CTGAAATTTCTCATAAATGA+AGG | + | chr3.3:76043318-76043337 | None:intergenic | 25.0% |
| ! | GAGATACTATTAGATATTGA+AGG | - | chr3.3:76043119-76043138 | MS.gene06736:intron | 25.0% |
| ! | GATACTCGAAAATTATAAAG+TGG | - | chr3.3:76043059-76043078 | MS.gene06736:intron | 25.0% |
| ! | GTTAATCACTTCTCATTTAT+AGG | + | chr3.3:76041584-76041603 | None:intergenic | 25.0% |
| ! | GTTTACACTATTCAAATTAC+TGG | - | chr3.3:76043901-76043920 | MS.gene06736:CDS | 25.0% |
| ! | TAAAAATAACCAACCAGAAA+AGG | + | chr3.3:76043647-76043666 | None:intergenic | 25.0% |
| ! | TATGTATCTGCATAAGAAAA+GGG | + | chr3.3:76044799-76044818 | None:intergenic | 25.0% |
| ! | TATTTGTGAGATAGATAAGA+TGG | - | chr3.3:76042210-76042229 | MS.gene06736:intron | 25.0% |
| ! | TTATCATCTTGACAATGTAT+TGG | - | chr3.3:76041963-76041982 | MS.gene06736:intron | 25.0% |
| ! | TTTAAATGTTTCTCGACAAA+TGG | + | chr3.3:76043832-76043851 | None:intergenic | 25.0% |
| !! | AAACAAAAGATTGTTGTTAG+TGG | + | chr3.3:76040962-76040981 | None:intergenic | 25.0% |
| !! | AACCATAATCACAAATTTTG+TGG | + | chr3.3:76044103-76044122 | None:intergenic | 25.0% |
| !! | ACCATAATCACAAATTTTGT+GGG | + | chr3.3:76044102-76044121 | None:intergenic | 25.0% |
| !! | AGTTAGTTATGTTAGTTTCA+GGG | + | chr3.3:76043168-76043187 | None:intergenic | 25.0% |
| !! | CAAAAGACTTTACATTTTTG+GGG | + | chr3.3:76041739-76041758 | None:intergenic | 25.0% |
| !! | TAGTTAGTTATGTTAGTTTC+AGG | + | chr3.3:76043169-76043188 | None:intergenic | 25.0% |
| !! | TCTATATTTTCTCACTAGTA+TGG | - | chr3.3:76042769-76042788 | MS.gene06736:intron | 25.0% |
| !! | TTACTGGTTACAAACTATTA+AGG | - | chr3.3:76042447-76042466 | MS.gene06736:intron | 25.0% |
| !! | TTTGTAACATTTTCAACAAG+TGG | + | chr3.3:76044172-76044191 | None:intergenic | 25.0% |
| !!! | AAAAGACTTTACATTTTTGG+GGG | + | chr3.3:76041738-76041757 | None:intergenic | 25.0% |
| !!! | AAGGGTAATTTTTTTACAGT+GGG | - | chr3.3:76044019-76044038 | MS.gene06736:intron | 25.0% |
| !!! | AGATACTGATTCATATTTGT+AGG | - | chr3.3:76042940-76042959 | MS.gene06736:intron | 25.0% |
| !!! | AGTATCTTTTTTGTCTTTGA+TGG | + | chr3.3:76043212-76043231 | None:intergenic | 25.0% |
| !!! | GATACTGATTCATATTTGTA+GGG | - | chr3.3:76042941-76042960 | MS.gene06736:intron | 25.0% |
| !!! | GTATCTTTTTTGTCTTTGAT+GGG | + | chr3.3:76043211-76043230 | None:intergenic | 25.0% |
| !!! | TAAGGGTAATTTTTTTACAG+TGG | - | chr3.3:76044018-76044037 | MS.gene06736:intron | 25.0% |
| !!! | TATTGCAATGGTTATTTTGT+AGG | - | chr3.3:76042291-76042310 | MS.gene06736:intron | 25.0% |
| !!! | TGTGGGTTTTAGATAAAAAA+AGG | - | chr3.3:76042855-76042874 | MS.gene06736:intron | 25.0% |
| !!! | TTATTTCAGGTTTTAGTTGT+TGG | - | chr3.3:76042127-76042146 | MS.gene06736:intron | 25.0% |
| AAAAATTATTTAGCAGACGG+TGG | + | chr3.3:76042101-76042120 | None:intergenic | 30.0% | |
| AATCATGTTTAGTAACTGTC+AGG | + | chr3.3:76044450-76044469 | None:intergenic | 30.0% | |
| AATCCCATTGAAAAGTTAGA+AGG | - | chr3.3:76044604-76044623 | MS.gene06736:intron | 30.0% | |
| AATTCAATAGCTGGCAAAAA+TGG | + | chr3.3:76042507-76042526 | None:intergenic | 30.0% | |
| AATTTAAATTACTCACCCAC+AGG | + | chr3.3:76042585-76042604 | None:intergenic | 30.0% | |
| ACAGTTCTCTATTATCACTT+AGG | - | chr3.3:76041848-76041867 | MS.gene06736:CDS | 30.0% | |
| ACATGTAGAAACAGAAAACT+TGG | + | chr3.3:76043990-76044009 | None:intergenic | 30.0% | |
| AGTTCTCTATTATCACTTAG+GGG | - | chr3.3:76041850-76041869 | MS.gene06736:CDS | 30.0% | |
| ATAACTCAGAGGTAAGTATA+TGG | - | chr3.3:76044659-76044678 | MS.gene06736:intron | 30.0% | |
| ATATTGAAGGAGTTTGAAAG+AGG | - | chr3.3:76043132-76043151 | MS.gene06736:intron | 30.0% | |
| ATCATGTTTAGTAACTGTCA+GGG | + | chr3.3:76044449-76044468 | None:intergenic | 30.0% | |
| ATCTGAGGAATCAACAATTA+CGG | + | chr3.3:76042562-76042581 | None:intergenic | 30.0% | |
| ATTCAATAGCTGGCAAAAAT+GGG | + | chr3.3:76042506-76042525 | None:intergenic | 30.0% | |
| CAGTAAATTAAAGCCATAGT+TGG | + | chr3.3:76042433-76042452 | None:intergenic | 30.0% | |
| CAGTTCTCTATTATCACTTA+GGG | - | chr3.3:76041849-76041868 | MS.gene06736:CDS | 30.0% | |
| CGTTTAAGAAATTCAATAGC+TGG | + | chr3.3:76042516-76042535 | None:intergenic | 30.0% | |
| CTTCTCTACTTTGATTGAAT+GGG | + | chr3.3:76041473-76041492 | None:intergenic | 30.0% | |
| GAAAGGAAATGGGAAATATA+TGG | + | chr3.3:76040935-76040954 | None:intergenic | 30.0% | |
| GAGACTGACTAAAATTTGAA+AGG | - | chr3.3:76042029-76042048 | MS.gene06736:intron | 30.0% | |
| GTATGTATCTGCATAAGAAA+AGG | + | chr3.3:76044800-76044819 | None:intergenic | 30.0% | |
| TCCCACAAAATTTGTGATTA+TGG | - | chr3.3:76044098-76044117 | MS.gene06736:CDS | 30.0% | |
| TCTTCTCTACTTTGATTGAA+TGG | + | chr3.3:76041474-76041493 | None:intergenic | 30.0% | |
| TGCTTATTGTATTCCTTTCT+TGG | - | chr3.3:76044510-76044529 | MS.gene06736:intron | 30.0% | |
| TGGTCTAATGAGATAAACTA+AGG | - | chr3.3:76043079-76043098 | MS.gene06736:intron | 30.0% | |
| TGTGTTAGATTGAGATACAA+GGG | + | chr3.3:76042824-76042843 | None:intergenic | 30.0% | |
| TTCATGTATACTTGCAACTT+TGG | - | chr3.3:76041086-76041105 | MS.gene06736:intron | 30.0% | |
| TTTATTTCAACAACCCAATG+TGG | - | chr3.3:76041025-76041044 | MS.gene06736:CDS | 30.0% | |
| ! | AAAGATTGTTGTTAGTGGAA+TGG | + | chr3.3:76040957-76040976 | None:intergenic | 30.0% |
| ! | AACATTTAGTTTATCCTCCT+TGG | + | chr3.3:76041311-76041330 | None:intergenic | 30.0% |
| ! | AACTTTTCAATGGGATTGAT+GGG | + | chr3.3:76044601-76044620 | None:intergenic | 30.0% |
| ! | AGATTTTTACTTGCCTAGTT+TGG | - | chr3.3:76044386-76044405 | MS.gene06736:intron | 30.0% |
| ! | ATGAAAAAAGTCGTGTTTTG+AGG | - | chr3.3:76042742-76042761 | MS.gene06736:intron | 30.0% |
| ! | GTTAGTTATGTTAGTTTCAG+GGG | + | chr3.3:76043167-76043186 | None:intergenic | 30.0% |
| ! | TAACTTTTCAATGGGATTGA+TGG | + | chr3.3:76044602-76044621 | None:intergenic | 30.0% |
| ! | TTGAAAATAACTTTTGGCCA+AGG | - | chr3.3:76041291-76041310 | MS.gene06736:intron | 30.0% |
| ! | TTGGTTCATCTTGATAGTAT+TGG | - | chr3.3:76044476-76044495 | MS.gene06736:intron | 30.0% |
| !! | CAACTATGGCTTTAATTTAC+TGG | - | chr3.3:76042431-76042450 | MS.gene06736:intron | 30.0% |
| !! | TCTTGACAATGTATTGGTTA+TGG | - | chr3.3:76041969-76041988 | MS.gene06736:intron | 30.0% |
| !! | TGGTTATTTTGTAGGTTTCT+AGG | - | chr3.3:76042299-76042318 | MS.gene06736:intron | 30.0% |
| !! | TTTCATATTGTTTTGTTGGC+TGG | - | chr3.3:76043425-76043444 | MS.gene06736:CDS | 30.0% |
| AAACTCTACCTTGGATATGT+TGG | + | chr3.3:76043885-76043904 | None:intergenic | 35.0% | |
| AACAGAGCTGATATGAATAG+TGG | + | chr3.3:76043274-76043293 | None:intergenic | 35.0% | |
| AAGGTTCTGTACATTATGCA+TGG | - | chr3.3:76043850-76043869 | MS.gene06736:CDS | 35.0% | |
| AATTACTGAAGATCCATCAG+TGG | + | chr3.3:76044073-76044092 | None:intergenic | 35.0% | |
| ACTAGGCAAGTAAAAATCTC+AGG | + | chr3.3:76044385-76044404 | None:intergenic | 35.0% | |
| AGGTTCTGTACATTATGCAT+GGG | - | chr3.3:76043851-76043870 | MS.gene06736:CDS | 35.0% | |
| ATATTACAAAGAACTCCACC+GGG | + | chr3.3:76043762-76043781 | None:intergenic | 35.0% | |
| ATATTCATCCTTCTCCATGA+AGG | + | chr3.3:76041232-76041251 | None:intergenic | 35.0% | |
| ATGCTCTTATATGTGTATGG+AGG | - | chr3.3:76041997-76042016 | MS.gene06736:intron | 35.0% | |
| ATGGCTTTCAAACAACATGA+AGG | + | chr3.3:76040800-76040819 | None:intergenic | 35.0% | |
| ATTACTGAAGATCCATCAGT+GGG | + | chr3.3:76044072-76044091 | None:intergenic | 35.0% | |
| CATATTACAAAGAACTCCAC+CGG | + | chr3.3:76043763-76043782 | None:intergenic | 35.0% | |
| CCAATGCTCTTATATGTGTA+TGG | - | chr3.3:76041994-76042013 | MS.gene06736:intron | 35.0% | |
| GAATAGTGTAAACTCTACCT+TGG | + | chr3.3:76043894-76043913 | None:intergenic | 35.0% | |
| GATCTGATCATCAGTGTATT+GGG | - | chr3.3:76041758-76041777 | MS.gene06736:CDS | 35.0% | |
| GATGGATCTTCAGTAATTGT+TGG | - | chr3.3:76044075-76044094 | MS.gene06736:CDS | 35.0% | |
| GATTGTTCAGTTGACTGAAA+AGG | - | chr3.3:76041658-76041677 | MS.gene06736:intron | 35.0% | |
| GGAAAGTTCTTGTACTTGAT+GGG | - | chr3.3:76041636-76041655 | MS.gene06736:intron | 35.0% | |
| GTGTGTTAGATTGAGATACA+AGG | + | chr3.3:76042825-76042844 | None:intergenic | 35.0% | |
| TAGATTGAGATACAAGGGTT+GGG | + | chr3.3:76042819-76042838 | None:intergenic | 35.0% | |
| TAGTGGAATGGAAAGGAAAT+GGG | + | chr3.3:76040945-76040964 | None:intergenic | 35.0% | |
| TATGCAAAATAACAGTCACC+TGG | + | chr3.3:76041051-76041070 | None:intergenic | 35.0% | |
| TCATGGAGAAGGATGAATAT+GGG | - | chr3.3:76041232-76041251 | MS.gene06736:intron | 35.0% | |
| TCTACATGTTGTGAGAGTAA+GGG | - | chr3.3:76044001-76044020 | MS.gene06736:intron | 35.0% | |
| TCTTAGGTTCTATAACTCAG+AGG | - | chr3.3:76044648-76044667 | MS.gene06736:intron | 35.0% | |
| TCTTATGCAGATACATACAG+CGG | - | chr3.3:76044802-76044821 | MS.gene06736:CDS | 35.0% | |
| TGATCTGATCATCAGTGTAT+TGG | - | chr3.3:76041757-76041776 | MS.gene06736:CDS | 35.0% | |
| TGGAAACAGTATGGGAAAAA+AGG | + | chr3.3:76042081-76042100 | None:intergenic | 35.0% | |
| TTAGATTGAGATACAAGGGT+TGG | + | chr3.3:76042820-76042839 | None:intergenic | 35.0% | |
| TTAGTGGAATGGAAAGGAAA+TGG | + | chr3.3:76040946-76040965 | None:intergenic | 35.0% | |
| TTCATGGAGAAGGATGAATA+TGG | - | chr3.3:76041231-76041250 | MS.gene06736:intron | 35.0% | |
| TTCTACATGTTGTGAGAGTA+AGG | - | chr3.3:76044000-76044019 | MS.gene06736:intron | 35.0% | |
| TTGAGACTGCTGAATATCAA+AGG | + | chr3.3:76041902-76041921 | None:intergenic | 35.0% | |
| TTTCACATTACCTTCTTGAG+AGG | - | chr3.3:76044321-76044340 | MS.gene06736:intron | 35.0% | |
| TTTCTTCTATGCTCAACAGA+GGG | - | chr3.3:76044553-76044572 | MS.gene06736:CDS | 35.0% | |
| ! | AAAATAACTTTTGGCCAAGG+AGG | - | chr3.3:76041294-76041313 | MS.gene06736:intron | 35.0% |
| ! | AACACACTTTTCGAAGTTGT+GGG | - | chr3.3:76042838-76042857 | MS.gene06736:intron | 35.0% |
| ! | ACTTTTCAATGGGATTGATG+GGG | + | chr3.3:76044600-76044619 | None:intergenic | 35.0% |
| ! | AGCACCTTCTAACTTTTCAA+TGG | + | chr3.3:76044611-76044630 | None:intergenic | 35.0% |
| ! | ATATCTAAGGCATTAAGACC+CGG | - | chr3.3:76043741-76043760 | MS.gene06736:intron | 35.0% |
| ! | CCATACACATATAAGAGCAT+TGG | + | chr3.3:76041997-76042016 | None:intergenic | 35.0% |
| ! | GAGTTAGATTCTTCCTTTTC+TGG | - | chr3.3:76043631-76043650 | MS.gene06736:intron | 35.0% |
| ! | GCACCTTCTAACTTTTCAAT+GGG | + | chr3.3:76044610-76044629 | None:intergenic | 35.0% |
| ! | GTAATATGGCAGAAAGTATG+TGG | - | chr3.3:76043775-76043794 | MS.gene06736:intron | 35.0% |
| ! | GTGTTGCTGGAAAAATTCAT+AGG | - | chr3.3:76044126-76044145 | MS.gene06736:intron | 35.0% |
| ! | TAACACACTTTTCGAAGTTG+TGG | - | chr3.3:76042837-76042856 | MS.gene06736:intron | 35.0% |
| ! | TTCATGTTGTTTGAAAGCCA+TGG | - | chr3.3:76040799-76040818 | MS.gene06736:intron | 35.0% |
| ! | TTGTTGTTAGTGGAATGGAA+AGG | + | chr3.3:76040952-76040971 | None:intergenic | 35.0% |
| ! | TTTGGTGTGTGTCTATCATT+AGG | - | chr3.3:76041442-76041461 | MS.gene06736:intron | 35.0% |
| ! | TTTTTCCAGAGTTAGCTGTT+GGG | - | chr3.3:76042326-76042345 | MS.gene06736:intron | 35.0% |
| !! | CAATCTTTTGTTTCATCGTG+TGG | - | chr3.3:76040969-76040988 | MS.gene06736:CDS | 35.0% |
| !! | GTTTGTTATCATGCCAACTA+TGG | - | chr3.3:76042417-76042436 | MS.gene06736:intron | 35.0% |
| !! | TAGATTCTTCCTTTTCTGGT+TGG | - | chr3.3:76043635-76043654 | MS.gene06736:intron | 35.0% |
| !!! | AAAAAAGTCGTGTTTTGAGG+AGG | - | chr3.3:76042745-76042764 | MS.gene06736:intron | 35.0% |
| !!! | GGTGACTGTTATTTTGCATA+TGG | - | chr3.3:76041051-76041070 | MS.gene06736:intron | 35.0% |
| !!! | TGGCATTTTGGAACAGTATA+GGG | - | chr3.3:76044406-76044425 | MS.gene06736:intron | 35.0% |
| !!! | TTGGCATTTTGGAACAGTAT+AGG | - | chr3.3:76044405-76044424 | MS.gene06736:intron | 35.0% |
| !!! | TTTCAGGTTTTAGTTGTTGG+TGG | - | chr3.3:76042130-76042149 | MS.gene06736:intron | 35.0% |
| !!! | TTTTTTCCAGAGTTAGCTGT+TGG | - | chr3.3:76042325-76042344 | MS.gene06736:intron | 35.0% |
| AAAGGATGAATGTGCTTACC+AGG | - | chr3.3:76041676-76041695 | MS.gene06736:intron | 40.0% | |
| AACAACGGTAGAGTGACAAT+TGG | + | chr3.3:76040846-76040865 | None:intergenic | 40.0% | |
| AATAGCTGGCAAAAATGGGT+GGG | + | chr3.3:76042502-76042521 | None:intergenic | 40.0% | |
| AATGCCAGAAGACTATGGAT+GGG | - | chr3.3:76040738-76040757 | MS.gene06736:CDS | 40.0% | |
| ACCTCATTCTTCAGAAATGC+AGG | + | chr3.3:76044839-76044858 | None:intergenic | 40.0% | |
| AGAAAAGTCACTGTACCAAG+AGG | - | chr3.3:76041504-76041523 | MS.gene06736:intron | 40.0% | |
| AGATTGAGATACAAGGGTTG+GGG | + | chr3.3:76042818-76042837 | None:intergenic | 40.0% | |
| ATGAGTGTGCTTAAAGGTTG+TGG | - | chr3.3:76044293-76044312 | MS.gene06736:intron | 40.0% | |
| ATGGAGAAGGATGAATATGG+GGG | - | chr3.3:76041234-76041253 | MS.gene06736:intron | 40.0% | |
| ATGGTTTCTCTACAAGTTCC+TGG | + | chr3.3:76043710-76043729 | None:intergenic | 40.0% | |
| ATTCCTTTCTTGGTATGCAG+TGG | - | chr3.3:76044520-76044539 | MS.gene06736:intron | 40.0% | |
| CAAAGTGAATCCTCTCAAGA+AGG | + | chr3.3:76044334-76044353 | None:intergenic | 40.0% | |
| CAAGTGTTCCAACATATCCA+AGG | - | chr3.3:76043874-76043893 | MS.gene06736:CDS | 40.0% | |
| CATGGAGAAGGATGAATATG+GGG | - | chr3.3:76041233-76041252 | MS.gene06736:intron | 40.0% | |
| CGGTGGAGTTCTTTGTAATA+TGG | - | chr3.3:76043761-76043780 | MS.gene06736:intron | 40.0% | |
| CTGTTCCAAAATGCCAAACT+AGG | + | chr3.3:76044402-76044421 | None:intergenic | 40.0% | |
| GCATTCCAAACCTCTTTCTA+CGG | + | chr3.3:76040723-76040742 | None:intergenic | 40.0% | |
| GGGAAAGTTCTTGTACTTGA+TGG | - | chr3.3:76041635-76041654 | MS.gene06736:intron | 40.0% | |
| GGGTTCACAAAATCAACATG+CGG | + | chr3.3:76044580-76044599 | None:intergenic | 40.0% | |
| GTAAGATCTTTCTTGCATGC+AGG | + | chr3.3:76044774-76044793 | None:intergenic | 40.0% | |
| GTGGGATCAACTTTATCATG+AGG | + | chr3.3:76044054-76044073 | None:intergenic | 40.0% | |
| GTTTCTTCTATGCTCAACAG+AGG | - | chr3.3:76044552-76044571 | MS.gene06736:CDS | 40.0% | |
| TGCAACGTGACAAACCAAAA+AGG | + | chr3.3:76044274-76044293 | None:intergenic | 40.0% | |
| TGGTTTCTCTACAAGTTCCT+GGG | + | chr3.3:76043709-76043728 | None:intergenic | 40.0% | |
| TTCTTAAACGTGCACCTGAA+GGG | - | chr3.3:76042526-76042545 | MS.gene06736:intron | 40.0% | |
| TTCTTCTATGCTCAACAGAG+GGG | - | chr3.3:76044554-76044573 | MS.gene06736:CDS | 40.0% | |
| TTGAAGGAGTTTGAAAGAGG+AGG | - | chr3.3:76043135-76043154 | MS.gene06736:intron | 40.0% | |
| TTGTCACTCTACCGTTGTTT+CGG | - | chr3.3:76040847-76040866 | MS.gene06736:intron | 40.0% | |
| TTTCTTAAACGTGCACCTGA+AGG | - | chr3.3:76042525-76042544 | MS.gene06736:intron | 40.0% | |
| ! | ACTTGCCTAGTTTGGCATTT+TGG | - | chr3.3:76044394-76044413 | MS.gene06736:intron | 40.0% |
| ! | CATTTCTGAAGAATGAGGTG+AGG | - | chr3.3:76044840-76044859 | MS.gene06736:CDS | 40.0% |
| ! | CTTGGTACAGTGACTTTTCT+TGG | + | chr3.3:76041504-76041523 | None:intergenic | 40.0% |
| ! | GATAAAGTTGATCCCACTGA+TGG | - | chr3.3:76044057-76044076 | MS.gene06736:CDS | 40.0% |
| ! | TAACAGGAATGGTTTGGAGA+AGG | - | chr3.3:76040769-76040788 | MS.gene06736:intron | 40.0% |
| ! | TGGAGAGCATGTCTTGAATA+AGG | + | chr3.3:76043812-76043831 | None:intergenic | 40.0% |
| ! | TTTGGAATGCCAGAAGACTA+TGG | - | chr3.3:76040733-76040752 | MS.gene06736:CDS | 40.0% |
| !! | ATAAGCATCGGAGGAATCTT+AGG | - | chr3.3:76044632-76044651 | MS.gene06736:intron | 40.0% |
| !! | CATATTGTTTTGTTGGCTGG+TGG | - | chr3.3:76043428-76043447 | MS.gene06736:CDS | 40.0% |
| !! | GACTTTACATTTTTGGGGGA+CGG | + | chr3.3:76041734-76041753 | None:intergenic | 40.0% |
| !! | TAGAAGGTGCTGATAAGCAT+CGG | - | chr3.3:76044620-76044639 | MS.gene06736:intron | 40.0% |
| !!! | AGGTCTTGGTTTTTGAGGTA+TGG | - | chr3.3:76041524-76041543 | MS.gene06736:intron | 40.0% |
| !!! | GGCATTTTGGAACAGTATAG+GGG | - | chr3.3:76044407-76044426 | MS.gene06736:intron | 40.0% |
| ACACCACTGCATACCAAGAA+AGG | + | chr3.3:76044526-76044545 | None:intergenic | 45.0% | |
| AGAAGGATGAATATGGGGGT+GGG | - | chr3.3:76041238-76041257 | MS.gene06736:intron | 45.0% | |
| CAATAGCTGGCAAAAATGGG+TGG | + | chr3.3:76042503-76042522 | None:intergenic | 45.0% | |
| CCTCAAAAACCAAGACCTCT+TGG | + | chr3.3:76041522-76041541 | None:intergenic | 45.0% | |
| CGTGACAAACCAAAAAGGCT+AGG | + | chr3.3:76044269-76044288 | None:intergenic | 45.0% | |
| CGTTGCATGAGTGTGCTTAA+AGG | - | chr3.3:76044287-76044306 | MS.gene06736:intron | 45.0% | |
| GAATGCCAGAAGACTATGGA+TGG | - | chr3.3:76040737-76040756 | MS.gene06736:CDS | 45.0% | |
| GGAAAATCGGAGCAAAACGA+AGG | + | chr3.3:76043522-76043541 | None:intergenic | 45.0% | |
| GTGTATATGACGGTTGCTGA+TGG | - | chr3.3:76041418-76041437 | MS.gene06736:intron | 45.0% | |
| GTGTGCTTAAAGGTTGTGGT+AGG | - | chr3.3:76044297-76044316 | MS.gene06736:intron | 45.0% | |
| GTTTAGTAACTGTCAGGGCA+CGG | + | chr3.3:76044444-76044463 | None:intergenic | 45.0% | |
| TCAAACCCAACAGCTAACTC+TGG | + | chr3.3:76042334-76042353 | None:intergenic | 45.0% | |
| TGGGCAAATGTTAGCAGTGT+TGG | + | chr3.3:76043192-76043211 | None:intergenic | 45.0% | |
| TGGTATGCAGTGGTGTGATA+GGG | - | chr3.3:76044530-76044549 | MS.gene06736:intron | 45.0% | |
| TTGATACAACCGAGCCTTCA+TGG | - | chr3.3:76041215-76041234 | MS.gene06736:intron | 45.0% | |
| TTGGTATGCAGTGGTGTGAT+AGG | - | chr3.3:76044529-76044548 | MS.gene06736:intron | 45.0% | |
| TTGTAATTTAGGTCCTGCCC+AGG | - | chr3.3:76043689-76043708 | MS.gene06736:intron | 45.0% | |
| ! | ATGACGGTTGCTGATGGTTT+TGG | - | chr3.3:76041424-76041443 | MS.gene06736:intron | 45.0% |
| ! | GATTATGGTTGGTGTGTTGC+TGG | - | chr3.3:76044113-76044132 | MS.gene06736:intron | 45.0% |
| ! | GCCTGCATTTCTGAAGAATG+AGG | - | chr3.3:76044835-76044854 | MS.gene06736:CDS | 45.0% |
| ! | GTACACTTGCATGTTGGTGA+TGG | - | chr3.3:76042364-76042383 | MS.gene06736:intron | 45.0% |
| ! | GTTGATTCCTCAGATCCTGT+GGG | - | chr3.3:76042567-76042586 | MS.gene06736:intron | 45.0% |
| ! | TCAGCATCTCAAACTTGCTC+TGG | - | chr3.3:76040878-76040897 | MS.gene06736:intron | 45.0% |
| ! | TGTCACTCTACCGTTGTTTC+GGG | - | chr3.3:76040848-76040867 | MS.gene06736:intron | 45.0% |
| !! | CCAAGAGGTCTTGGTTTTTG+AGG | - | chr3.3:76041519-76041538 | MS.gene06736:intron | 45.0% |
| !! | GCAGTTGATCCTAGCCTTTT+TGG | - | chr3.3:76044257-76044276 | MS.gene06736:intron | 45.0% |
| !! | TACATTTTTGGGGGACGGAA+TGG | + | chr3.3:76041729-76041748 | None:intergenic | 45.0% |
| !! | TGTTGATTCCTCAGATCCTG+TGG | - | chr3.3:76042566-76042585 | MS.gene06736:intron | 45.0% |
| !! | TTAGTTGTTGGTGGTGGAGA+TGG | - | chr3.3:76042139-76042158 | MS.gene06736:intron | 45.0% |
| !!! | CAGGTTTTAGTTGTTGGTGG+TGG | - | chr3.3:76042133-76042152 | MS.gene06736:intron | 45.0% |
| !! | TATAAAAAAGTTAAAAATTT+AGG | - | chr3.3:76044235-76044254 | MS.gene06736:intron | 5.0% |
| AACAGTCACCTGGCCACATT+GGG | + | chr3.3:76041041-76041060 | None:intergenic | 50.0% | |
| AAGGATGAATATGGGGGTGG+GGG | - | chr3.3:76041240-76041259 | MS.gene06736:intron | 50.0% | |
| AGCAGACGGTGGAAACAGTA+TGG | + | chr3.3:76042090-76042109 | None:intergenic | 50.0% | |
| CAATATGCTCCACAGAGCTG+TGG | + | chr3.3:76042189-76042208 | None:intergenic | 50.0% | |
| CATCCTTCTCCATGAAGGCT+CGG | + | chr3.3:76041227-76041246 | None:intergenic | 50.0% | |
| CCAACATGCAAGTGTACACG+AGG | + | chr3.3:76042361-76042380 | None:intergenic | 50.0% | |
| CCAGAAGACTATGGATGGGA+AGG | - | chr3.3:76040742-76040761 | MS.gene06736:CDS | 50.0% | |
| CCTCGTGTACACTTGCATGT+TGG | - | chr3.3:76042358-76042377 | MS.gene06736:intron | 50.0% | |
| CCTTCCCATCCATAGTCTTC+TGG | + | chr3.3:76040745-76040764 | None:intergenic | 50.0% | |
| GAAGGATGAATATGGGGGTG+GGG | - | chr3.3:76041239-76041258 | MS.gene06736:intron | 50.0% | |
| GAGAAGGATGAATATGGGGG+TGG | - | chr3.3:76041237-76041256 | MS.gene06736:intron | 50.0% | |
| GCAGACGGTGGAAACAGTAT+GGG | + | chr3.3:76042089-76042108 | None:intergenic | 50.0% | |
| GGAGATGAGCTATCATCTCC+TGG | + | chr3.3:76041697-76041716 | None:intergenic | 50.0% | |
| GGCGAGTAACAGGAATGGTT+TGG | - | chr3.3:76040763-76040782 | MS.gene06736:intron | 50.0% | |
| GTCACTGTACCAAGAGGTCT+TGG | - | chr3.3:76041510-76041529 | MS.gene06736:intron | 50.0% | |
| TAACAGTCACCTGGCCACAT+TGG | + | chr3.3:76041042-76041061 | None:intergenic | 50.0% | |
| TGAGAACCACCCCGAAACAA+CGG | + | chr3.3:76040861-76040880 | None:intergenic | 50.0% | |
| TTAAACGTGCACCTGAAGGG+AGG | - | chr3.3:76042529-76042548 | MS.gene06736:intron | 50.0% | |
| TTACTCACCCACAGGATCTG+AGG | + | chr3.3:76042577-76042596 | None:intergenic | 50.0% | |
| TTCAACAACCCAATGTGGCC+AGG | - | chr3.3:76041030-76041049 | MS.gene06736:intron | 50.0% | |
| TTCTCTACAAGTTCCTGGGC+AGG | + | chr3.3:76043705-76043724 | None:intergenic | 50.0% | |
| ! | ACAATTGGCCTCCAACTCAG+GGG | + | chr3.3:76040831-76040850 | None:intergenic | 50.0% |
| ! | GACAATTGGCCTCCAACTCA+GGG | + | chr3.3:76040832-76040851 | None:intergenic | 50.0% |
| ! | GTCACTCTACCGTTGTTTCG+GGG | - | chr3.3:76040849-76040868 | MS.gene06736:intron | 50.0% |
| ! | TCTAAGGCATTAAGACCCGG+TGG | - | chr3.3:76043744-76043763 | MS.gene06736:intron | 50.0% |
| ! | TGACAATTGGCCTCCAACTC+AGG | + | chr3.3:76040833-76040852 | None:intergenic | 50.0% |
| !! | AAGGTGCTGATAAGCATCGG+AGG | - | chr3.3:76044623-76044642 | MS.gene06736:intron | 50.0% |
| !! | TGGAGATGGTGGGGTTCTAA+GGG | - | chr3.3:76042153-76042172 | MS.gene06736:intron | 50.0% |
| !! | TTGTTGGTGGTGGAGATGGT+GGG | - | chr3.3:76042143-76042162 | MS.gene06736:intron | 50.0% |
| ATGAATATGGGGGTGGGGGA+AGG | - | chr3.3:76041244-76041263 | MS.gene06736:intron | 55.0% | |
| CAACCGAGCCTTCATGGAGA+AGG | - | chr3.3:76041221-76041240 | MS.gene06736:intron | 55.0% | |
| GGACGCCGTAGAAAGAGGTT+TGG | - | chr3.3:76040715-76040734 | MS.gene06736:CDS | 55.0% | |
| GGGAAGGCGAGTAACAGGAA+TGG | - | chr3.3:76040758-76040777 | MS.gene06736:intron | 55.0% | |
| TATGCTCCACAGAGCTGTGG+CGG | + | chr3.3:76042186-76042205 | None:intergenic | 55.0% | |
| TGGATGGGAAGGCGAGTAAC+AGG | - | chr3.3:76040753-76040772 | MS.gene06736:CDS | 55.0% | |
| ! | ACTCTACCGTTGTTTCGGGG+TGG | - | chr3.3:76040852-76040871 | MS.gene06736:intron | 55.0% |
| !! | GTGGAGATGGTGGGGTTCTA+AGG | - | chr3.3:76042152-76042171 | MS.gene06736:intron | 55.0% |
| !! | GTTGTTGGTGGTGGAGATGG+TGG | - | chr3.3:76042142-76042161 | MS.gene06736:intron | 55.0% |
| !! | TGTTGGTGGTGGAGATGGTG+GGG | - | chr3.3:76042144-76042163 | MS.gene06736:intron | 55.0% |
| ACGGCGTCATACCTCCCTTC+AGG | + | chr3.3:76042543-76042562 | None:intergenic | 60.0% | |
| AGTATCCCGCCACAGCTCTG+TGG | - | chr3.3:76042177-76042196 | MS.gene06736:intron | 60.0% | |
| ATGCTCCACAGAGCTGTGGC+GGG | + | chr3.3:76042185-76042204 | None:intergenic | 60.0% | |
| ATGGGGGACGCCGTAGAAAG+AGG | - | chr3.3:76040710-76040729 | MS.gene06736:CDS | 60.0% | |
| CAACTCAGGGGCTGAAGCCA+TGG | + | chr3.3:76040819-76040838 | None:intergenic | 60.0% | |
| CATGGCTTCAGCCCCTGAGT+TGG | - | chr3.3:76040817-76040836 | MS.gene06736:intron | 60.0% | |
| GGGACGGAATGGAACAGAGG+GGG | + | chr3.3:76041718-76041737 | None:intergenic | 60.0% | |
| GGGGACGGAATGGAACAGAG+GGG | + | chr3.3:76041719-76041738 | None:intergenic | 60.0% | |
| GGGGGACGGAATGGAACAGA+GGG | + | chr3.3:76041720-76041739 | None:intergenic | 60.0% | |
| TGGGGGACGGAATGGAACAG+AGG | + | chr3.3:76041721-76041740 | None:intergenic | 60.0% | |
| ! | GGCTTCAGCCCCTGAGTTGG+AGG | - | chr3.3:76040820-76040839 | MS.gene06736:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 76040710 | 76044877 | 76040710 | ID=MS.gene06736 |
| chr3.3 | mRNA | 76040710 | 76044877 | 76040710 | ID=MS.gene06736.t1;Parent=MS.gene06736 |
| chr3.3 | exon | 76044688 | 76044877 | 76044688 | ID=MS.gene06736.t1.exon1;Parent=MS.gene06736.t1 |
| chr3.3 | CDS | 76044688 | 76044877 | 76044688 | ID=cds.MS.gene06736.t1;Parent=MS.gene06736.t1 |
| chr3.3 | exon | 76044536 | 76044580 | 76044536 | ID=MS.gene06736.t1.exon2;Parent=MS.gene06736.t1 |
| chr3.3 | CDS | 76044536 | 76044580 | 76044536 | ID=cds.MS.gene06736.t1;Parent=MS.gene06736.t1 |
| chr3.3 | exon | 76044047 | 76044123 | 76044047 | ID=MS.gene06736.t1.exon3;Parent=MS.gene06736.t1 |
| chr3.3 | CDS | 76044047 | 76044123 | 76044047 | ID=cds.MS.gene06736.t1;Parent=MS.gene06736.t1 |
| chr3.3 | exon | 76043842 | 76043964 | 76043842 | ID=MS.gene06736.t1.exon4;Parent=MS.gene06736.t1 |
| chr3.3 | CDS | 76043842 | 76043964 | 76043842 | ID=cds.MS.gene06736.t1;Parent=MS.gene06736.t1 |
| chr3.3 | exon | 76043347 | 76043451 | 76043347 | ID=MS.gene06736.t1.exon5;Parent=MS.gene06736.t1 |
| chr3.3 | CDS | 76043347 | 76043451 | 76043347 | ID=cds.MS.gene06736.t1;Parent=MS.gene06736.t1 |
| chr3.3 | exon | 76043202 | 76043274 | 76043202 | ID=MS.gene06736.t1.exon6;Parent=MS.gene06736.t1 |
| chr3.3 | CDS | 76043202 | 76043274 | 76043202 | ID=cds.MS.gene06736.t1;Parent=MS.gene06736.t1 |
| chr3.3 | exon | 76042999 | 76043070 | 76042999 | ID=MS.gene06736.t1.exon7;Parent=MS.gene06736.t1 |
| chr3.3 | CDS | 76042999 | 76043070 | 76042999 | ID=cds.MS.gene06736.t1;Parent=MS.gene06736.t1 |
| chr3.3 | exon | 76041692 | 76041887 | 76041692 | ID=MS.gene06736.t1.exon8;Parent=MS.gene06736.t1 |
| chr3.3 | CDS | 76041692 | 76041887 | 76041692 | ID=cds.MS.gene06736.t1;Parent=MS.gene06736.t1 |
| chr3.3 | exon | 76040918 | 76041047 | 76040918 | ID=MS.gene06736.t1.exon9;Parent=MS.gene06736.t1 |
| chr3.3 | CDS | 76040918 | 76041047 | 76040918 | ID=cds.MS.gene06736.t1;Parent=MS.gene06736.t1 |
| chr3.3 | exon | 76040710 | 76040775 | 76040710 | ID=MS.gene06736.t1.exon10;Parent=MS.gene06736.t1 |
| chr3.3 | CDS | 76040710 | 76040775 | 76040710 | ID=cds.MS.gene06736.t1;Parent=MS.gene06736.t1 |
| Gene Sequence |
| Protein sequence |
