AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene067395

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene067395.t1 MTR_2g103730 98.888 809 9 0 1 809 1 809 0.0 1666
MS.gene067395.t1 MTR_4g010650 86.279 809 110 1 1 809 1 808 0.0 1485
MS.gene067395.t1 MTR_3g107320 64.234 836 255 11 5 809 4 826 0.0 1079
MS.gene067395.t1 MTR_3g107360 63.164 828 273 11 5 809 4 822 0.0 1063
MS.gene067395.t1 MTR_7g075910 46.368 826 392 16 4 797 297 1103 0.0 734
MS.gene067395.t1 MTR_5g011050 45.738 833 388 17 4 797 36 843 0.0 731
MS.gene067395.t1 MTR_8g033080 45.933 836 392 17 1 797 224 1038 0.0 731
MS.gene067395.t1 MTR_5g011060 45.134 822 403 17 4 797 36 837 0.0 714
MS.gene067395.t1 MTR_5g023050 46.278 806 368 14 50 809 86 872 0.0 712
MS.gene067395.t1 MTR_8g088690 45.476 851 398 20 4 809 13 842 0.0 703
MS.gene067395.t1 MTR_3g114840 44.406 858 412 18 2 809 9 851 0.0 699
MS.gene067395.t1 MTR_2g100250 44.760 811 384 19 5 809 4 756 0.0 651
MS.gene067395.t1 MTR_3g114840 42.911 797 382 18 2 739 9 791 0.0 608
MS.gene067395.t1 MTR_8g016160 41.892 814 389 23 5 809 7 745 0.0 586
MS.gene067395.t1 MTR_8g033080 44.984 618 297 12 1 590 224 826 4.39e-174 523
MS.gene067395.t1 MTR_1g083620 33.054 239 123 9 498 726 477 688 3.77e-23 105
MS.gene067395.t1 MTR_1g083620 28.696 230 119 9 211 427 127 324 6.64e-15 79.3
MS.gene067395.t1 MTR_1g083620 33.054 239 123 9 498 726 737 948 4.48e-23 106
MS.gene067395.t1 MTR_1g083620 28.696 230 119 9 211 427 387 584 4.58e-15 80.1
MS.gene067395.t1 MTR_2g435560 30.242 248 135 8 457 693 600 820 2.40e-18 90.9
MS.gene067395.t1 MTR_2g435560 26.641 259 135 11 211 449 253 476 2.29e-14 77.8
MS.gene067395.t1 MTR_2g435560 30.924 249 132 10 457 693 735 955 2.54e-18 90.9
MS.gene067395.t1 MTR_2g435560 26.641 259 135 11 211 449 388 611 2.04e-14 78.2
MS.gene067395.t1 MTR_5g023040 51.389 72 31 1 324 395 806 873 3.72e-18 90.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene067395.t1 AT3G15730 80.812 813 149 2 1 809 1 810 0.0 1400
MS.gene067395.t1 AT1G52570 79.285 811 165 3 1 809 1 810 0.0 1364
MS.gene067395.t1 AT1G52570 79.285 811 165 3 1 809 1 810 0.0 1364
MS.gene067395.t1 AT1G52570 79.285 811 165 3 1 809 1 810 0.0 1364
MS.gene067395.t1 AT5G25370 62.228 826 284 10 3 809 4 820 0.0 1038
MS.gene067395.t1 AT5G25370 62.228 826 284 10 3 809 4 820 0.0 1038
MS.gene067395.t1 AT5G25370 62.228 826 284 10 3 809 4 820 0.0 1038
MS.gene067395.t1 AT5G25370 65.323 744 249 6 72 809 5 745 0.0 1006
MS.gene067395.t1 AT2G42010 45.742 822 400 16 4 797 269 1072 0.0 738
MS.gene067395.t1 AT2G42010 44.668 844 402 16 4 797 269 1097 0.0 730
MS.gene067395.t1 AT4G00240 45.910 819 403 16 4 797 113 916 0.0 726
MS.gene067395.t1 AT4G00240 47.416 774 373 14 44 797 122 881 0.0 723
MS.gene067395.t1 AT4G00240 47.416 774 373 14 44 797 5 764 0.0 723
MS.gene067395.t1 AT4G11830 45.048 828 405 18 5 797 33 845 0.0 713
MS.gene067395.t1 AT4G11830 46.410 780 377 17 44 797 49 813 0.0 707
MS.gene067395.t1 AT4G11840 44.565 828 409 17 5 797 43 855 0.0 706
MS.gene067395.t1 AT4G11850 44.782 824 409 16 5 797 39 847 0.0 704
MS.gene067395.t1 AT4G11840 44.256 827 383 17 5 797 43 825 0.0 691
MS.gene067395.t1 AT4G35790 45.330 803 379 18 46 809 76 857 0.0 672
MS.gene067395.t1 AT4G35790 44.963 814 377 19 46 809 76 868 0.0 667
MS.gene067395.t1 AT1G55180 40.465 818 408 19 6 809 10 762 0.0 587
MS.gene067395.t1 AT1G55180 41.505 771 391 17 50 809 19 740 0.0 586
MS.gene067395.t1 AT4G35790 45.219 617 290 13 46 627 76 679 7.77e-173 515
MS.gene067395.t1 AT4G11830 44.007 609 304 12 5 590 33 627 2.27e-168 501
MS.gene067395.t1 AT4G11830 43.740 599 300 12 5 580 33 617 3.11e-164 491
MS.gene067395.t1 AT3G05630 27.036 614 289 27 208 725 372 922 8.23e-31 130
MS.gene067395.t1 AT3G16785 34.483 203 99 8 497 693 756 930 9.50e-19 92.0
MS.gene067395.t1 AT3G16785 30.045 223 105 8 221 427 390 577 5.86e-15 79.7
MS.gene067395.t1 AT3G16785 34.483 203 99 8 497 693 756 930 9.50e-19 92.0
MS.gene067395.t1 AT3G16785 30.045 223 105 8 221 427 390 577 5.86e-15 79.7
MS.gene067395.t1 AT3G16785 34.483 203 99 8 497 693 756 930 9.50e-19 92.0
MS.gene067395.t1 AT3G16785 28.514 249 123 9 221 449 390 603 5.74e-15 80.1
MS.gene067395.t1 AT3G16785 34.483 203 99 8 497 693 756 930 9.50e-19 92.0
MS.gene067395.t1 AT3G16785 28.514 249 123 9 221 449 390 603 5.74e-15 80.1
MS.gene067395.t1 AT3G16785 34.483 203 99 8 497 693 756 930 9.90e-19 92.0
MS.gene067395.t1 AT3G16785 28.514 249 123 9 221 449 390 603 5.59e-15 80.1
MS.gene067395.t1 AT3G16785 34.483 203 99 8 497 693 756 930 1.03e-18 92.0
MS.gene067395.t1 AT3G16785 28.514 249 123 9 221 449 390 603 5.31e-15 80.1

Find 247 sgRNAs with CRISPR-Local

Find 375 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTAATGCATTCTTCACTTTC+TGG 0.019872 2.4:+1785057 None:intergenic
GCCTGAACTGATGCACTTTC+TGG 0.110790 2.4:+1785991 None:intergenic
CCTATTGGGGCAACCTTAAT+TGG 0.143828 2.4:-1787428 MS.gene067395:CDS
GAATCAGGTTCTGGTCTTTC+AGG 0.151953 2.4:+1785814 None:intergenic
TACTCATCATCAGAAAATTT+TGG 0.198426 2.4:-1786739 MS.gene067395:CDS
ATCTTAAGTGAAAGCTCTTT+TGG 0.217956 2.4:+1786084 None:intergenic
TTGACGGTGGAGCAGCTTTC+GGG 0.225952 2.4:-1786317 MS.gene067395:CDS
CCTGGTGCTTCAATAGAAAA+AGG 0.253077 2.4:-1786552 MS.gene067395:CDS
GACACCAAGGCTCGTGTTCT+TGG 0.259989 2.4:-1784886 MS.gene067395:CDS
ACCTCCTGCAAGTTGTATAT+TGG 0.269725 2.4:+1787139 None:intergenic
ACCTTCTCCGCTATCCCATT+GGG 0.270807 2.4:-1784960 MS.gene067395:CDS
TAAGGAACTCCAGGAAATTT+AGG 0.271707 2.4:+1787236 None:intergenic
ATGAAACTAAGTAGTAAGTA+TGG 0.272402 2.4:+1784840 None:intergenic
ATCTTTGAATTTCCATGAAT+TGG 0.275511 2.4:+1787323 None:intergenic
ACCAGATTGCTGACAAATAT+TGG 0.280067 2.4:-1785026 MS.gene067395:CDS
TTAGGGTATTAATGCTTGTT+TGG 0.281535 2.4:-1786929 MS.gene067395:CDS
AGATAGGTGGGTTGAAATAT+TGG 0.293912 2.4:-1787360 MS.gene067395:CDS
ATGTTTCAAAAGACCGCAAC+TGG 0.294096 2.4:-1787277 MS.gene067395:CDS
ATTGACGGTGGAGCAGCTTT+CGG 0.298826 2.4:-1786318 MS.gene067395:CDS
TAGCACCATCCATTGATCTT+TGG 0.299079 2.4:+1785217 None:intergenic
TGGTGCCAATTTCTATATTC+TGG 0.302016 2.4:+1786766 None:intergenic
CCATGAATCTGACCCCTTGC+AGG 0.320797 2.4:+1785138 None:intergenic
TAATGCATTCTTCACTTTCT+GGG 0.323254 2.4:+1785058 None:intergenic
GTGAAAGATGATAATCCTAT+TGG 0.323636 2.4:-1787443 MS.gene067395:CDS
ATCAATGGTTGCATAAAGTT+TGG 0.323808 2.4:+1787583 None:intergenic
CCTCCTGCAAGTTGTATATT+GGG 0.327612 2.4:+1787140 None:intergenic
CCAATTAAGGTTGCCCCAAT+AGG 0.334639 2.4:+1787428 None:intergenic
TTTCATCAGCCTAACTTTCC+TGG 0.335279 2.4:-1786570 MS.gene067395:CDS
CCAGCTTTAGCAGCATCTTC+AGG 0.337228 2.4:+1786282 None:intergenic
TTATTTAATCCCACTTCATT+TGG 0.342886 2.4:+1786699 None:intergenic
TTCCATGTCTCTTGATCATC+AGG 0.343259 2.4:+1786360 None:intergenic
GTCCCCAATATACAACTTGC+AGG 0.343312 2.4:-1787143 MS.gene067395:CDS
AACCCTATCATTTAGCTAAT+AGG 0.346495 2.4:-1785164 MS.gene067395:CDS
TGATCATCAGGGAAAGTTAC+TGG 0.348678 2.4:+1786372 None:intergenic
CCCAATATTTGTCAGCAATC+TGG 0.350230 2.4:+1785025 None:intergenic
TGAAAGATGATAATCCTATT+GGG 0.352247 2.4:-1787442 MS.gene067395:CDS
CTGCCTATTAGCTAAATGAT+AGG 0.357619 2.4:+1785161 None:intergenic
TACTGGGGATGGGGTAATAA+TGG 0.358885 2.4:+1786389 None:intergenic
TCACATTTACTGTGCCCATT+TGG 0.361006 2.4:-1787486 MS.gene067395:CDS
CATTCCTGTTGAGGAGGTAT+TGG 0.363727 2.4:-1787396 MS.gene067395:CDS
CACCTTCTCCGCTATCCCAT+TGG 0.367992 2.4:-1784961 MS.gene067395:CDS
CCTGCAAGGGGTCAGATTCA+TGG 0.370010 2.4:-1785138 MS.gene067395:CDS
AGGCACTTAATATACATTAC+AGG 0.372424 2.4:-1787059 MS.gene067395:CDS
ATTGTCCAGAATATAGAAAT+TGG 0.374763 2.4:-1786771 MS.gene067395:CDS
AATGTACGCCCTTCCAATTA+AGG 0.374946 2.4:+1787415 None:intergenic
CCTGAACTGATGCACTTTCT+GGG 0.377490 2.4:+1785992 None:intergenic
ATTCCTGTTGAGGAGGTATT+GGG 0.378380 2.4:-1787395 MS.gene067395:CDS
ATGCAAAGCACCAATGTCTT+CGG 0.382460 2.4:+1786113 None:intergenic
TAGGGTATTAATGCTTGTTT+GGG 0.385598 2.4:-1786928 MS.gene067395:CDS
CTCTGTCACGCTTCCTTCAC+TGG 0.390332 2.4:+1784933 None:intergenic
CCCAGAAAGTGCATCAGTTC+AGG 0.391340 2.4:-1785992 MS.gene067395:CDS
CACACAAAGACAAGGTTGTA+AGG 0.391884 2.4:-1787204 MS.gene067395:CDS
GCTAAAGCTGGGCTTATTAG+TGG 0.392386 2.4:-1786270 MS.gene067395:CDS
ATTAGAAGTCCTAAATTTCC+TGG 0.394374 2.4:-1787245 MS.gene067395:CDS
GTGATGTCTCCTCCTGGCTT+TGG 0.396802 2.4:+1786990 None:intergenic
AGAACACGAGCCTTGGTGTC+AGG 0.406228 2.4:+1784889 None:intergenic
GGCTTGAAGGTCCCATTGCT+TGG 0.410425 2.4:-1786494 MS.gene067395:CDS
CAGAAAGTGAAGAATGCATT+AGG 0.410724 2.4:-1785056 MS.gene067395:CDS
TGCAAAGCACCAATGTCTTC+GGG 0.417253 2.4:+1786114 None:intergenic
GTGAATAAAGAACCAATTCA+TGG 0.418317 2.4:-1787335 MS.gene067395:CDS
CCAGATTGCTGACAAATATT+GGG 0.419715 2.4:-1785025 MS.gene067395:CDS
CCTGAAGATGCTGCTAAAGC+TGG 0.422903 2.4:-1786282 MS.gene067395:CDS
TCTTCATGCTACAATCTTTG+AGG 0.430433 2.4:-1789428 MS.gene067395:CDS
TGTCTTATGCCCTCGCAATC+CGG 0.432330 2.4:-1786808 MS.gene067395:CDS
TTACTTACCTATCATCATCT+TGG 0.432761 2.4:+1785741 None:intergenic
TTCGGAAAAGTGAATGAAAC+GGG 0.434688 2.4:+1786619 None:intergenic
TTTGAGGAGACAGTTGGATT+CGG 0.439825 2.4:-1787617 MS.gene067395:CDS
CTTTGTGTGTAGAAAGCATA+AGG 0.440268 2.4:+1787218 None:intergenic
ATACTGAGATTTCCTTGGTA+AGG 0.443762 2.4:-1787025 MS.gene067395:CDS
ATTGAAGCACCAGGAAAGTT+AGG 0.444896 2.4:+1786561 None:intergenic
ATATAATCTGAATCAGGTTC+TGG 0.445716 2.4:+1785805 None:intergenic
TCGTGCTTTCTCTAAATCAA+TGG 0.446591 2.4:+1787568 None:intergenic
ATTGAAAATCAATATTTCCT+TGG 0.448120 2.4:-1786171 MS.gene067395:CDS
TTTCCTTGGTAAGGGATTCA+AGG 0.448128 2.4:-1787016 MS.gene067395:CDS
GGAAGGATAACATAATAGAT+AGG 0.450815 2.4:-1786248 MS.gene067395:CDS
GTTCATGCCAAGATGATGAT+AGG 0.452461 2.4:-1785748 MS.gene067395:intron
ATTGTTAGCAAGATTGAAGC+TGG 0.453049 2.4:-1786063 MS.gene067395:CDS
CAAAACTTTGAGGAGACAGT+TGG 0.453252 2.4:-1787623 MS.gene067395:CDS
TTAGATAAGACAAAACTTTG+AGG 0.453476 2.4:-1787633 MS.gene067395:intron
GATATCCACTCAAGGCTTGA+AGG 0.460473 2.4:-1786507 MS.gene067395:CDS
AGCAGCATCTTCAGGAGTCT+CGG 0.461063 2.4:+1786290 None:intergenic
CCACCCAATACCTCCTCAAC+AGG 0.461488 2.4:+1787392 None:intergenic
GCAGCATCTTCAGGAGTCTC+GGG 0.461536 2.4:+1786291 None:intergenic
GCTTGAAGGTCCCATTGCTT+GGG 0.466265 2.4:-1786493 MS.gene067395:CDS
TGTTTATACTGAGATTTCCT+TGG 0.470042 2.4:-1787030 MS.gene067395:CDS
CATTGATCTTTGGTTGATGT+TGG 0.471677 2.4:+1785227 None:intergenic
TCCGCCAAGAACACGAGCCT+TGG 0.472706 2.4:+1784882 None:intergenic
GCTCGCATATAATCTGAATC+AGG 0.474750 2.4:+1785799 None:intergenic
GGATAGCGGAGAAGGTGGCC+AGG 0.478302 2.4:+1784967 None:intergenic
TATTTGACGTTCTTCTGCCT+TGG 0.479379 2.4:-1785874 MS.gene067395:CDS
CCCATTGGGGTTTCCAGTGA+AGG 0.480016 2.4:-1784946 MS.gene067395:CDS
ATATTGGGGACAAAATTGTC+TGG 0.480142 2.4:+1787155 None:intergenic
CAGGGAAAGTTACTGGGGAT+GGG 0.481757 2.4:+1786379 None:intergenic
TACTGAGATTTCCTTGGTAA+GGG 0.486700 2.4:-1787024 MS.gene067395:CDS
GCACTTTCTGGGACACCCTC+AGG 0.486846 2.4:+1786003 None:intergenic
ATATGATATCCGATGCCAAA+TGG 0.487948 2.4:+1787471 None:intergenic
AGCTAATAGGCAGCCTGCAA+GGG 0.491417 2.4:-1785151 MS.gene067395:CDS
TATGATATCCGATGCCAAAT+GGG 0.492675 2.4:+1787472 None:intergenic
AGGAGCATGTTAATCCTCAA+TGG 0.492749 2.4:-1787520 MS.gene067395:CDS
AGATTATATGCGAGCTCAAG+AGG 0.493595 2.4:-1785791 MS.gene067395:CDS
AGGATCTTCCTCAATTCCCT+TGG 0.495088 2.4:+1785903 None:intergenic
AACAAAACATCCCAAGCAAT+GGG 0.497488 2.4:+1786483 None:intergenic
AAAGACCGCAACTGGGCTCT+AGG 0.498162 2.4:-1787269 MS.gene067395:CDS
CCCCAATGGGATAGCGGAGA+AGG 0.498169 2.4:+1784959 None:intergenic
GAGACAGTTGGATTCGGAAA+AGG 0.499116 2.4:-1787611 MS.gene067395:CDS
TGTTTAACTTTGAGCAGAGA+TGG 0.499268 2.4:-1786464 MS.gene067395:CDS
GATCATCAGGGAAAGTTACT+GGG 0.499638 2.4:+1786373 None:intergenic
TCAGGGAAAGTTACTGGGGA+TGG 0.501750 2.4:+1786378 None:intergenic
CTTACCAGCCTCATAGATGT+TGG 0.502263 2.4:-1787112 MS.gene067395:CDS
CCAAGTGTGATGTCTCCTCC+TGG 0.503968 2.4:+1786984 None:intergenic
CAGCTATTTAGATCTATTGA+CGG 0.506424 2.4:-1786333 MS.gene067395:CDS
TCCTTCACTGGAAACCCCAA+TGG 0.508775 2.4:+1784945 None:intergenic
TAGCTAATAGGCAGCCTGCA+AGG 0.513603 2.4:-1785152 MS.gene067395:CDS
TTCACTTTCTGGGTGAAGGA+AGG 0.516269 2.4:+1785068 None:intergenic
AGAGACTCTGAAATTGCAAT+GGG 0.517579 2.4:-1785195 MS.gene067395:CDS
AGGGAAAGTTACTGGGGATG+GGG 0.517899 2.4:+1786380 None:intergenic
GATAAACTCAAGAATATTAG+TGG 0.518555 2.4:-1789403 MS.gene067395:CDS
TTACCAGCCTCATAGATGTT+GGG 0.519232 2.4:-1787111 MS.gene067395:CDS
GATTCAAGGAGGCCAAAGCC+AGG 0.523097 2.4:-1787002 MS.gene067395:CDS
TCAGGGAAGAATTCAAATCC+TGG 0.524099 2.4:+1784907 None:intergenic
TAGAAAGCATAAGGAACTCC+AGG 0.524275 2.4:+1787227 None:intergenic
ACAATGCTTCCACCATCATC+CGG 0.527676 2.4:+1786789 None:intergenic
ATGGAGGAAGCAAGGTGGAA+AGG 0.528791 2.4:-1786445 MS.gene067395:CDS
ACTCAATGCCAAGGGAATTG+AGG 0.529142 2.4:-1785911 MS.gene067395:CDS
TGGTGGTAACATTCTTTCCA+AGG 0.530172 2.4:-1789383 MS.gene067395:intron
TGCCCTCGCAATCCGGATGA+TGG 0.530747 2.4:-1786801 MS.gene067395:CDS
ATTCTTCACTTTCTGGGTGA+AGG 0.535092 2.4:+1785064 None:intergenic
AAGGACCAGAATCATAGAAA+AGG 0.535661 2.4:-1787540 MS.gene067395:CDS
TTGGGGCAACCTTAATTGGA+AGG 0.538056 2.4:-1787424 MS.gene067395:CDS
AACATAAATCATGAAACGCC+TGG 0.540335 2.4:+1785768 None:intergenic
CCTCCCAACATCTATGAGGC+TGG 0.541750 2.4:+1787108 None:intergenic
ACCAAGGCTCGTGTTCTTGG+CGG 0.542154 2.4:-1784883 MS.gene067395:CDS
ACATCCTCCCAACATCTATG+AGG 0.542285 2.4:+1787104 None:intergenic
CAACATCAACCAAAGATCAA+TGG 0.542537 2.4:-1785226 MS.gene067395:CDS
ACTCTTGAGCATGATCTCCC+TGG 0.542825 2.4:-1784985 MS.gene067395:CDS
AACTAAGTAGTAAGTATGGG+TGG 0.545943 2.4:+1784844 None:intergenic
CCACCATCATCCGGATTGCG+AGG 0.547386 2.4:+1786798 None:intergenic
CTAAAGCTGGGCTTATTAGT+GGG 0.547451 2.4:-1786269 MS.gene067395:CDS
ATATGCGAGCTCAAGAGGCC+AGG 0.547877 2.4:-1785786 MS.gene067395:CDS
CACAGTGCACTTCAGAGCCT+CGG 0.549999 2.4:+1786829 None:intergenic
GAACACGAGCCTTGGTGTCA+GGG 0.550469 2.4:+1784890 None:intergenic
GTGGTTCCCATGTGGCCTGA+GGG 0.550831 2.4:-1786018 MS.gene067395:CDS
CTGAAGATGCTGCTAAAGCT+GGG 0.551525 2.4:-1786281 MS.gene067395:CDS
TGTCTGGGATATGAGAATCT+TGG 0.552039 2.4:+1787171 None:intergenic
GGTATTAAGCCCGAAGACAT+TGG 0.552107 2.4:-1786123 MS.gene067395:CDS
TCAGGTTCTGGTCTTTCAGG+AGG 0.552348 2.4:+1785817 None:intergenic
AAAAGCACAAGAAGGTGTTA+GGG 0.552796 2.4:-1786946 MS.gene067395:CDS
CAGTTCAGGCAATATTAGAC+TGG 0.553731 2.4:-1785978 MS.gene067395:CDS
ATGGCGCAAATTCTGCTACA+TGG 0.553894 2.4:-1789454 MS.gene067395:CDS
CCTTCACTGGAAACCCCAAT+GGG 0.554387 2.4:+1784946 None:intergenic
TGAAAAGACTCATTCCATTG+AGG 0.555517 2.4:+1787506 None:intergenic
TTACTGTGCCCATTTGGCAT+CGG 0.556368 2.4:-1787480 MS.gene067395:CDS
AAGGTGGTCCTAGGGAACCT+TGG 0.556879 2.4:-1786533 MS.gene067395:CDS
GTTCGGAAAAGTGAATGAAA+CGG 0.557902 2.4:+1786618 None:intergenic
TGAAACTAAGTAGTAAGTAT+GGG 0.559004 2.4:+1784841 None:intergenic
AAACAAAACATCCCAAGCAA+TGG 0.559086 2.4:+1786482 None:intergenic
TATTGAAGCACTCAATGCCA+AGG 0.561553 2.4:-1785920 MS.gene067395:CDS
GCAAGATTGAAGCTGGGGAA+AGG 0.562968 2.4:-1786056 MS.gene067395:CDS
TGCCTATTAGCTAAATGATA+GGG 0.565055 2.4:+1785162 None:intergenic
ATATCATGCCAAGGTTCCCT+AGG 0.565440 2.4:+1786525 None:intergenic
TGGTGAGGAAATAGATAGGT+GGG 0.565449 2.4:-1787372 MS.gene067395:CDS
TCCTTGGAAGTTGCTATGCG+TGG 0.566885 2.4:-1786155 MS.gene067395:CDS
GATGTGCTGTGTCCAGAGTT+CGG 0.567045 2.4:+1786601 None:intergenic
TTGTTAGCAAGATTGAAGCT+GGG 0.569020 2.4:-1786062 MS.gene067395:CDS
TAGAGAAAGCACGAGTTGGA+AGG 0.569104 2.4:-1787559 MS.gene067395:CDS
GATTTAGAGAAAGCACGAGT+TGG 0.572450 2.4:-1787563 MS.gene067395:CDS
AGCTGGGCTTATTAGTGGGA+AGG 0.572547 2.4:-1786265 MS.gene067395:CDS
GGAAGCGTGACAGAGCTGCC+AGG 0.573645 2.4:-1784925 MS.gene067395:CDS
GAGCAGAGATGGAGGAAGCA+AGG 0.573687 2.4:-1786453 MS.gene067395:CDS
CACCATCATCCGGATTGCGA+GGG 0.575824 2.4:+1786799 None:intergenic
TAGAGACTCTGAAATTGCAA+TGG 0.576832 2.4:-1785196 MS.gene067395:CDS
AGGCAATATTAGACTGGCAG+AGG 0.578738 2.4:-1785972 MS.gene067395:CDS
CAATATTAGACTGGCAGAGG+AGG 0.580334 2.4:-1785969 MS.gene067395:CDS
CCTTCTCCGCTATCCCATTG+GGG 0.580634 2.4:-1784959 MS.gene067395:CDS
TGGGACACCCTCAGGCCACA+TGG 0.580916 2.4:+1786011 None:intergenic
CCAGGAGGAGACATCACACT+TGG 0.582493 2.4:-1786984 MS.gene067395:CDS
TATTGGGGACAAAATTGTCT+GGG 0.586684 2.4:+1787156 None:intergenic
TTGATGCAATCACAAAAGCA+AGG 0.590614 2.4:-1787079 MS.gene067395:CDS
TGGGGCAACCTTAATTGGAA+GGG 0.592393 2.4:-1787423 MS.gene067395:CDS
TGCTATGCGTGGAGTGCTGA+TGG 0.592466 2.4:-1786144 MS.gene067395:CDS
AAGGGCGTACATTCCTGTTG+AGG 0.595296 2.4:-1787405 MS.gene067395:CDS
GATGATGAATACATAATCGT+CGG 0.596091 2.4:-1785255 MS.gene067395:CDS
ACTAAGTAGTAAGTATGGGT+GGG 0.596722 2.4:+1784845 None:intergenic
GATAGCGGAGAAGGTGGCCA+GGG 0.597233 2.4:+1784968 None:intergenic
TGGGTGGTGAGGAAATAGAT+AGG 0.598716 2.4:-1787376 MS.gene067395:CDS
CAGTGAGTTGCCAAATGAAG+TGG 0.600965 2.4:-1786709 MS.gene067395:CDS
TGGGACCTTCAAGCCTTGAG+TGG 0.600994 2.4:+1786502 None:intergenic
CTGCCTTGGCAATCGTGAGG+TGG 0.601677 2.4:-1785860 MS.gene067395:CDS
CAATGGGATAGCGGAGAAGG+TGG 0.603242 2.4:+1784962 None:intergenic
AAGTGAAGAATGCATTAGGA+AGG 0.603278 2.4:-1785052 MS.gene067395:CDS
TGTTAGCAAGATTGAAGCTG+GGG 0.605624 2.4:-1786061 MS.gene067395:CDS
TGTGGTTCCCATGTGGCCTG+AGG 0.610251 2.4:-1786019 MS.gene067395:CDS
TCCCTGATGATCAAGAGACA+TGG 0.611192 2.4:-1786362 MS.gene067395:CDS
AATCGTGAGGTGGTAAAACA+AGG 0.614433 2.4:-1785850 MS.gene067395:CDS
AAGTAGTAAGTATGGGTGGG+AGG 0.614752 2.4:+1784848 None:intergenic
CTCCTGCAAGTTGTATATTG+GGG 0.614898 2.4:+1787141 None:intergenic
AGGTTTCTTGAAGCATGCCA+AGG 0.615494 2.4:+1785088 None:intergenic
GAAAGATGATAATCCTATTG+GGG 0.615615 2.4:-1787441 MS.gene067395:CDS
TGAGGAGGTATTGGGTGGTG+AGG 0.615634 2.4:-1787387 MS.gene067395:CDS
CAGAGATGGAGGAAGCAAGG+TGG 0.616614 2.4:-1786450 MS.gene067395:CDS
GGCGTACATTCCTGTTGAGG+AGG 0.617287 2.4:-1787402 MS.gene067395:CDS
TCCACGCATAGCAACTTCCA+AGG 0.620565 2.4:+1786154 None:intergenic
GGAGGCATTGATCTCTGTGA+TGG 0.621298 2.4:-1786654 MS.gene067395:CDS
CTTCTGCCTTGGCAATCGTG+AGG 0.622625 2.4:-1785863 MS.gene067395:CDS
GGGACACCCTCAGGCCACAT+GGG 0.624478 2.4:+1786012 None:intergenic
GCTTTCTACACACAAAGACA+AGG 0.625992 2.4:-1787212 MS.gene067395:CDS
GGCACTTAATATACATTACA+GGG 0.626213 2.4:-1787058 MS.gene067395:CDS
TACTCATGATCAAGAAACTG+AGG 0.627462 2.4:-1786859 MS.gene067395:CDS
TGAATTCTTCCCTGACACCA+AGG 0.627778 2.4:-1784899 MS.gene067395:CDS
AGGGAATTGAGGAAGATCCT+CGG 0.629175 2.4:-1785900 MS.gene067395:CDS
TGGAAACCCCAATGGGATAG+CGG 0.631998 2.4:+1784953 None:intergenic
CTTGGCATGATATCCACTCA+AGG 0.633068 2.4:-1786515 MS.gene067395:CDS
ATGGTTTCCGCATGTCGTTG+TGG 0.633145 2.4:-1785119 MS.gene067395:CDS
GCTAATAGGCAGCCTGCAAG+GGG 0.633258 2.4:-1785150 MS.gene067395:CDS
AGTGAGTTGCCAAATGAAGT+GGG 0.635597 2.4:-1786708 MS.gene067395:CDS
AAACTCAAGAATATTAGTGG+TGG 0.636100 2.4:-1789400 MS.gene067395:CDS
CTATTTAGATCTATTGACGG+TGG 0.636765 2.4:-1786330 MS.gene067395:CDS
TTACCACCTCACGATTGCCA+AGG 0.638073 2.4:+1785857 None:intergenic
ATTGAAGCACTCAATGCCAA+GGG 0.639765 2.4:-1785919 MS.gene067395:CDS
ATCAACCAAAGATCAATGGA+TGG 0.639768 2.4:-1785222 MS.gene067395:CDS
AAGGTTCACTGTGTATGTTG+TGG 0.644280 2.4:-1786037 MS.gene067395:CDS
TAATGCCTAGAGCCCAGTTG+CGG 0.646642 2.4:+1787264 None:intergenic
CCTCGCAATCCGGATGATGG+TGG 0.647794 2.4:-1786798 MS.gene067395:CDS
TGTTTGGGATGATAGAACGT+CGG 0.648160 2.4:-1786913 MS.gene067395:CDS
CCTCCTTGAATCCCTTACCA+AGG 0.648283 2.4:+1787013 None:intergenic
GTGGTGAGGAAATAGATAGG+TGG 0.648470 2.4:-1787373 MS.gene067395:CDS
GCTCATACCACAACGACATG+CGG 0.651651 2.4:+1785112 None:intergenic
CAGCATCTTCAGGAGTCTCG+GGG 0.656506 2.4:+1786292 None:intergenic
TGTTTCAAAAGACCGCAACT+GGG 0.657307 2.4:-1787276 MS.gene067395:CDS
CCAGCCTCATAGATGTTGGG+AGG 0.659901 2.4:-1787108 MS.gene067395:CDS
CCTTGGTAAGGGATTCAAGG+AGG 0.659944 2.4:-1787013 MS.gene067395:CDS
GAAACTGAGGAATTCTTCCG+AGG 0.663978 2.4:-1786846 MS.gene067395:CDS
CTTGAGTGGATATCATGCCA+AGG 0.664717 2.4:+1786516 None:intergenic
CCTGTTGAGGAGGTATTGGG+TGG 0.671652 2.4:-1787392 MS.gene067395:CDS
TTAACTTTGAGCAGAGATGG+AGG 0.672683 2.4:-1786461 MS.gene067395:CDS
ATCATCAGGGAAAGTTACTG+GGG 0.676162 2.4:+1786374 None:intergenic
TCCATGTCTCTTGATCATCA+GGG 0.682272 2.4:+1786361 None:intergenic
GCATCTTCAAGCTCTCTCAG+AGG 0.687558 2.4:+1786411 None:intergenic
AGACTGGCAGAGGAGGACAA+TGG 0.689150 2.4:-1785962 MS.gene067395:CDS
AAGAACGTCAAATAGTTCCG+AGG 0.694365 2.4:+1785883 None:intergenic
CCCAATATACAACTTGCAGG+AGG 0.700952 2.4:-1787140 MS.gene067395:CDS
TCAAGGAGGCCAAAGCCAGG+AGG 0.704971 2.4:-1786999 MS.gene067395:CDS
TTTCTGATGATGAGTAAACA+TGG 0.707021 2.4:+1786746 None:intergenic
TGTATGTTGTGGTTCCCATG+TGG 0.707881 2.4:-1786026 MS.gene067395:CDS
TCGTTGTGGTATGAGCACCT+TGG 0.762594 2.4:-1785105 MS.gene067395:CDS
ACTTAATATACATTACAGGG+TGG 0.764594 2.4:-1787055 MS.gene067395:CDS
TCGGAAAAGTGAATGAAACG+GGG 0.795326 2.4:+1786620 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAATAAAAATCAAATCTT+CGG + chr2.4:1785550-1785569 None:intergenic 10.0%
!! ATATATTCATTTAGATTATT+AGG - chr2.4:1785978-1785997 MS.gene067395:CDS 10.0%
!! TATATTCATTTAGATTATTA+GGG - chr2.4:1785979-1785998 MS.gene067395:CDS 10.0%
!! AATAAAAGCCAAAAAAAAAA+AGG + chr2.4:1784956-1784975 None:intergenic 15.0%
!! AATTATTCATTTAGATAAGT+TGG - chr2.4:1788851-1788870 MS.gene067395:intron 15.0%
!! TAAAAAAAGTAAATCACTTT+AGG - chr2.4:1785794-1785813 MS.gene067395:CDS 15.0%
!!! AAACAAAAATATTTTCATCA+GGG + chr2.4:1786525-1786544 None:intergenic 15.0%
!!! ATTTTTTGTGAAAAAGAAAA+AGG - chr2.4:1785572-1785591 MS.gene067395:intron 15.0%
!!! TTGATTTTAAAGTTATTTGT+AGG - chr2.4:1788801-1788820 MS.gene067395:intron 15.0%
!!! TTTTTTGTGAAAAAGAAAAA+GGG - chr2.4:1785573-1785592 MS.gene067395:intron 15.0%
!! AAAAGAACATTAAATGTGAT+TGG + chr2.4:1785706-1785725 None:intergenic 20.0%
!! AAAGTTATTTGTAGGATAAA+AGG - chr2.4:1788809-1788828 MS.gene067395:intron 20.0%
!! AAGGAATGTTATACAAAATA+TGG + chr2.4:1788598-1788617 None:intergenic 20.0%
!! AGATTCAAATGAACAAATTA+AGG + chr2.4:1786116-1786135 None:intergenic 20.0%
!! AGATTGTAAGAATGAAAAAA+GGG - chr2.4:1785604-1785623 MS.gene067395:intron 20.0%
!! ATCAAAAGAATAGATTGTTA+AGG + chr2.4:1786390-1786409 None:intergenic 20.0%
!! ATTGAAAATCAATATTTCCT+TGG - chr2.4:1788129-1788148 MS.gene067395:intron 20.0%
!! CTTCAAAAAAAAATTGTGAA+GGG - chr2.4:1786067-1786086 MS.gene067395:CDS 20.0%
!! TAAACTCATAAATGTTTGAA+TGG - chr2.4:1785466-1785485 MS.gene067395:intron 20.0%
!! TAGATTGTAAGAATGAAAAA+AGG - chr2.4:1785603-1785622 MS.gene067395:intron 20.0%
!! TCTTCAAAAAAAAATTGTGA+AGG - chr2.4:1786066-1786085 MS.gene067395:CDS 20.0%
!!! ATGTTTGATTTTAATTGTGA+AGG - chr2.4:1786034-1786053 MS.gene067395:CDS 20.0%
!!! ATTCAATCTGAAATTTTGTT+AGG - chr2.4:1785271-1785290 MS.gene067395:intron 20.0%
!!! CTCAATCATAAAAAAAGTAT+TGG + chr2.4:1788635-1788654 None:intergenic 20.0%
!!! CTTTTCTTCCTTTTTTTTTT+TGG - chr2.4:1784945-1784964 MS.gene067395:CDS 20.0%
!!! GAAACAAAAATATTTTCATC+AGG + chr2.4:1786526-1786545 None:intergenic 20.0%
!!! GTTAGGTTAATTGTAATTTT+TGG - chr2.4:1785288-1785307 MS.gene067395:intron 20.0%
!!! TGTTTGATTTTAATTGTGAA+GGG - chr2.4:1786035-1786054 MS.gene067395:CDS 20.0%
! ATCTTTGAATTTCCATGAAT+TGG + chr2.4:1786980-1786999 None:intergenic 25.0%
! ATTGTCCAGAATATAGAAAT+TGG - chr2.4:1787529-1787548 MS.gene067395:CDS 25.0%
! GATAAACTCAAGAATATTAG+TGG - chr2.4:1784897-1784916 MS.gene067395:CDS 25.0%
! TACTGTTGTAAATTTCTAAC+TGG - chr2.4:1785917-1785936 MS.gene067395:CDS 25.0%
! TGAAAGATGATAATCCTATT+GGG - chr2.4:1786858-1786877 MS.gene067395:CDS 25.0%
! TGAGATTAATAAAAGAAAGC+TGG - chr2.4:1788928-1788947 MS.gene067395:intron 25.0%
! TTAGATAAGACAAAACTTTG+AGG - chr2.4:1786667-1786686 MS.gene067395:CDS 25.0%
! TTATAATATCGCCAATTGTA+TGG - chr2.4:1785859-1785878 MS.gene067395:CDS 25.0%
! TTATTTAATCCCACTTCATT+TGG + chr2.4:1787604-1787623 None:intergenic 25.0%
! TTCCTCTGTTAAAAAAAGAT+GGG - chr2.4:1787410-1787429 MS.gene067395:CDS 25.0%
! TTTGTACCTTTATTACATGA+TGG - chr2.4:1786549-1786568 MS.gene067395:CDS 25.0%
!! GAAGGATAATTTTTCACTTT+TGG - chr2.4:1786571-1786590 MS.gene067395:CDS 25.0%
!! TACTCATCATCAGAAAATTT+TGG - chr2.4:1787561-1787580 MS.gene067395:CDS 25.0%
!!! AGAATTTTTTTGTCCAAATG+TGG + chr2.4:1788878-1788897 None:intergenic 25.0%
!!! CATATGTGTTCATGTTTTTT+GGG + chr2.4:1786257-1786276 None:intergenic 25.0%
!!! GATGGGATATTTTTAAGAAT+GGG - chr2.4:1786351-1786370 MS.gene067395:CDS 25.0%
!!! TCATATGTGTTCATGTTTTT+TGG + chr2.4:1786258-1786277 None:intergenic 25.0%
!!! TCTGTTATTTGTTTGTTGTA+CGG - chr2.4:1785031-1785050 MS.gene067395:CDS 25.0%
!!! TGATGGGATATTTTTAAGAA+TGG - chr2.4:1786350-1786369 MS.gene067395:CDS 25.0%
AAACTCAAGAATATTAGTGG+TGG - chr2.4:1784900-1784919 MS.gene067395:CDS 30.0%
AACCCTATCATTTAGCTAAT+AGG - chr2.4:1789136-1789155 MS.gene067395:intron 30.0%
ACCAAGAAAATATCCTTTGA+TGG - chr2.4:1788978-1788997 MS.gene067395:intron 30.0%
ACTTAATATACATTACAGGG+TGG - chr2.4:1787245-1787264 MS.gene067395:CDS 30.0%
AGGCACTTAATATACATTAC+AGG - chr2.4:1787241-1787260 MS.gene067395:CDS 30.0%
AGGTTTGAGTAAAATTCATG+TGG + chr2.4:1788718-1788737 None:intergenic 30.0%
ATATAATCTGAATCAGGTTC+TGG + chr2.4:1788498-1788517 None:intergenic 30.0%
ATCAATGGTTGCATAAAGTT+TGG + chr2.4:1786720-1786739 None:intergenic 30.0%
ATCCTTCCATCATGTAATAA+AGG + chr2.4:1786558-1786577 None:intergenic 30.0%
ATGAACACATATGAACTCAA+AGG - chr2.4:1786264-1786283 MS.gene067395:CDS 30.0%
ATTAGAAGTCCTAAATTTCC+TGG - chr2.4:1787055-1787074 MS.gene067395:CDS 30.0%
ATTTGCCCAAAAACTTCTAA+AGG + chr2.4:1785820-1785839 None:intergenic 30.0%
CAGCTATTTAGATCTATTGA+CGG - chr2.4:1787967-1787986 MS.gene067395:intron 30.0%
GAAAGATGATAATCCTATTG+GGG - chr2.4:1786859-1786878 MS.gene067395:CDS 30.0%
GATGATGAATACATAATCGT+CGG - chr2.4:1789045-1789064 MS.gene067395:intron 30.0%
GGAAGGATAACATAATAGAT+AGG - chr2.4:1788052-1788071 MS.gene067395:intron 30.0%
GGCACTTAATATACATTACA+GGG - chr2.4:1787242-1787261 MS.gene067395:CDS 30.0%
GGCGATATTATAAAAATCCA+AGG + chr2.4:1785852-1785871 None:intergenic 30.0%
GGTTTGAGTAAAATTCATGT+GGG + chr2.4:1788717-1788736 None:intergenic 30.0%
GTGAAAGATGATAATCCTAT+TGG - chr2.4:1786857-1786876 MS.gene067395:CDS 30.0%
GTGAATAAAGAACCAATTCA+TGG - chr2.4:1786965-1786984 MS.gene067395:CDS 30.0%
GTTCCTCTGTTAAAAAAAGA+TGG - chr2.4:1787409-1787428 MS.gene067395:CDS 30.0%
TAATGCATTCTTCACTTTCT+GGG + chr2.4:1789245-1789264 None:intergenic 30.0%
TCTTAAAAATATCCCATCAG+AGG + chr2.4:1786349-1786368 None:intergenic 30.0%
TGCCTATTAGCTAAATGATA+GGG + chr2.4:1789141-1789160 None:intergenic 30.0%
TGTTTATACTGAGATTTCCT+TGG - chr2.4:1787270-1787289 MS.gene067395:CDS 30.0%
TTACTTACCTATCATCATCT+TGG + chr2.4:1788562-1788581 None:intergenic 30.0%
! AAAGGATATTTTCTTGGTGA+AGG + chr2.4:1788976-1788995 None:intergenic 30.0%
! AAATGTTTGAATGGTAGTGA+AGG - chr2.4:1785475-1785494 MS.gene067395:intron 30.0%
! ACCATCAAAGGATATTTTCT+TGG + chr2.4:1788982-1789001 None:intergenic 30.0%
! AGAAAATATCCTTTGATGGT+AGG - chr2.4:1788982-1789001 MS.gene067395:intron 30.0%
! ATCTTAACCTTGTTCGTTTT+AGG - chr2.4:1786408-1786427 MS.gene067395:CDS 30.0%
! ATCTTAAGTGAAAGCTCTTT+TGG + chr2.4:1788219-1788238 None:intergenic 30.0%
! ATTTTCTTGGTGAAGGAAAA+GGG + chr2.4:1788969-1788988 None:intergenic 30.0%
! GAGATTTGTTCTTTCAAACA+TGG - chr2.4:1785370-1785389 MS.gene067395:intron 30.0%
! TACCTTTATTACATGATGGA+AGG - chr2.4:1786553-1786572 MS.gene067395:CDS 30.0%
! TAGGGTATTAATGCTTGTTT+GGG - chr2.4:1787372-1787391 MS.gene067395:CDS 30.0%
! TATTTTCTTGGTGAAGGAAA+AGG + chr2.4:1788970-1788989 None:intergenic 30.0%
! TCATCATCAGAAAATTTTGG+TGG - chr2.4:1787564-1787583 MS.gene067395:CDS 30.0%
! TCTTAACCTTGTTCGTTTTA+GGG - chr2.4:1786409-1786428 MS.gene067395:CDS 30.0%
! TCTTAAGTGAAAGCTCTTTT+GGG + chr2.4:1788218-1788237 None:intergenic 30.0%
! TTAGGGTATTAATGCTTGTT+TGG - chr2.4:1787371-1787390 MS.gene067395:CDS 30.0%
! TTTCTGATGATGAGTAAACA+TGG + chr2.4:1787557-1787576 None:intergenic 30.0%
!! ATTGGAAAGAAAGTGTTAGA+AGG + chr2.4:1788617-1788636 None:intergenic 30.0%
!! CAAAAGGTCATTTTAATGTC+AGG + chr2.4:1786155-1786174 None:intergenic 30.0%
!! GTTAAAAAAAGATGGGTTGA+TGG - chr2.4:1787417-1787436 MS.gene067395:CDS 30.0%
!! TTAGGCCTTTAGAAGTTTTT+GGG - chr2.4:1785812-1785831 MS.gene067395:CDS 30.0%
!! TTTAGGCCTTTAGAAGTTTT+TGG - chr2.4:1785811-1785830 MS.gene067395:CDS 30.0%
!!! AACCCATCTTTTTTTAACAG+AGG + chr2.4:1787415-1787434 None:intergenic 30.0%
AAACAAAACATCCCAAGCAA+TGG + chr2.4:1787821-1787840 None:intergenic 35.0%
AACAAAACATCCCAAGCAAT+GGG + chr2.4:1787820-1787839 None:intergenic 35.0%
AACAAACCTGGATCTTTGTT+AGG - chr2.4:1786288-1786307 MS.gene067395:CDS 35.0%
AACATAAATCATGAAACGCC+TGG + chr2.4:1788535-1788554 None:intergenic 35.0%
AAGGACCAGAATCATAGAAA+AGG - chr2.4:1786760-1786779 MS.gene067395:CDS 35.0%
AAGTGAAGAATGCATTAGGA+AGG - chr2.4:1789248-1789267 MS.gene067395:intron 35.0%
AATAGAAAAAGGTGGTCCTA+GGG - chr2.4:1787759-1787778 MS.gene067395:intron 35.0%
ACATAGCATATGCAGGATAA+AGG + chr2.4:1786229-1786248 None:intergenic 35.0%
ACCAGATTGCTGACAAATAT+TGG - chr2.4:1789274-1789293 MS.gene067395:intron 35.0%
AGACCAGCTTAATGAACAAA+AGG + chr2.4:1786171-1786190 None:intergenic 35.0%
ATACTGAGATTTCCTTGGTA+AGG - chr2.4:1787275-1787294 MS.gene067395:CDS 35.0%
ATATGATATCCGATGCCAAA+TGG + chr2.4:1786832-1786851 None:intergenic 35.0%
ATATTGGGGACAAAATTGTC+TGG + chr2.4:1787148-1787167 None:intergenic 35.0%
ATCAACCAAAGATCAATGGA+TGG - chr2.4:1789078-1789097 MS.gene067395:intron 35.0%
ATGAACTTCTGTCTTATCCA+TGG + chr2.4:1785661-1785680 None:intergenic 35.0%
ATGATTGAGCAATGTTCACA+TGG - chr2.4:1788646-1788665 MS.gene067395:intron 35.0%
ATGCACTTATGCTAAAACGA+AGG + chr2.4:1786455-1786474 None:intergenic 35.0%
ATTGTTAGCAAGATTGAAGC+TGG - chr2.4:1788237-1788256 MS.gene067395:intron 35.0%
CAAAAAATTGCAGCTTCACA+TGG + chr2.4:1787003-1787022 None:intergenic 35.0%
CAACATCAACCAAAGATCAA+TGG - chr2.4:1789074-1789093 MS.gene067395:intron 35.0%
CAGAAAGTGAAGAATGCATT+AGG - chr2.4:1789244-1789263 MS.gene067395:intron 35.0%
CAGTTCAAGTCTTTCTGATA+AGG + chr2.4:1785445-1785464 None:intergenic 35.0%
CCAGATTGCTGACAAATATT+GGG - chr2.4:1789275-1789294 MS.gene067395:intron 35.0%
CTAACGCATGTAAACATAAG+TGG + chr2.4:1786500-1786519 None:intergenic 35.0%
CTAATGCATTCTTCACTTTC+TGG + chr2.4:1789246-1789265 None:intergenic 35.0%
CTAGTTAGTTGGAAGGATAA+AGG - chr2.4:1785499-1785518 MS.gene067395:intron 35.0%
CTATTTAGATCTATTGACGG+TGG - chr2.4:1787970-1787989 MS.gene067395:intron 35.0%
CTGCCTATTAGCTAAATGAT+AGG + chr2.4:1789142-1789161 None:intergenic 35.0%
GAAAAGGAGACCTACTAAAT+AGG + chr2.4:1788681-1788700 None:intergenic 35.0%
GATAAGACAGAAGTTCATCA+AGG - chr2.4:1785663-1785682 MS.gene067395:intron 35.0%
GGATAAAACATAGCATATGC+AGG + chr2.4:1786236-1786255 None:intergenic 35.0%
GTTCGGAAAAGTGAATGAAA+CGG + chr2.4:1787685-1787704 None:intergenic 35.0%
TAAGGAACTCCAGGAAATTT+AGG + chr2.4:1787067-1787086 None:intergenic 35.0%
TACTCATGATCAAGAAACTG+AGG - chr2.4:1787441-1787460 MS.gene067395:CDS 35.0%
TACTGAGATTTCCTTGGTAA+GGG - chr2.4:1787276-1787295 MS.gene067395:CDS 35.0%
TATGATATCCGATGCCAAAT+GGG + chr2.4:1786831-1786850 None:intergenic 35.0%
TATTGGGGACAAAATTGTCT+GGG + chr2.4:1787147-1787166 None:intergenic 35.0%
TCGTGCTTTCTCTAAATCAA+TGG + chr2.4:1786735-1786754 None:intergenic 35.0%
TCTTCATGCTACAATCTTTG+AGG - chr2.4:1784872-1784891 MS.gene067395:CDS 35.0%
TGAAAAGACTCATTCCATTG+AGG + chr2.4:1786797-1786816 None:intergenic 35.0%
TGAATCTATTTGTCACCTGT+CGG - chr2.4:1786129-1786148 MS.gene067395:CDS 35.0%
TGATTGAGCAATGTTCACAT+GGG - chr2.4:1788647-1788666 MS.gene067395:intron 35.0%
TGCACTTATGCTAAAACGAA+GGG + chr2.4:1786454-1786473 None:intergenic 35.0%
TTCGGAAAAGTGAATGAAAC+GGG + chr2.4:1787684-1787703 None:intergenic 35.0%
TTGATGCAATCACAAAAGCA+AGG - chr2.4:1787221-1787240 MS.gene067395:CDS 35.0%
TTGTTAGCAAGATTGAAGCT+GGG - chr2.4:1788238-1788257 MS.gene067395:intron 35.0%
! AAAGGGAAAGTGTAAAGAGA+TGG - chr2.4:1785621-1785640 MS.gene067395:intron 35.0%
! ACGCATTCAATCAGAAGTAT+CGG - chr2.4:1785155-1785174 MS.gene067395:CDS 35.0%
! ATGCTCCTTTTCTATGATTC+TGG + chr2.4:1786768-1786787 None:intergenic 35.0%
! CATTGATCTTTGGTTGATGT+TGG + chr2.4:1789076-1789095 None:intergenic 35.0%
! CTCAAGAAAAAAGCACAAGA+AGG - chr2.4:1787346-1787365 MS.gene067395:CDS 35.0%
! CTTTGTGTGTAGAAAGCATA+AGG + chr2.4:1787085-1787104 None:intergenic 35.0%
! TGACCTTTTGTTCATTAAGC+TGG - chr2.4:1786165-1786184 MS.gene067395:CDS 35.0%
! TGGTGCCAATTTCTATATTC+TGG + chr2.4:1787537-1787556 None:intergenic 35.0%
! TGTTTAACTTTGAGCAGAGA+TGG - chr2.4:1787836-1787855 MS.gene067395:intron 35.0%
!! AAAAAGCACAAGAAGGTGTT+AGG - chr2.4:1787353-1787372 MS.gene067395:CDS 35.0%
!! AAAAGCACAAGAAGGTGTTA+GGG - chr2.4:1787354-1787373 MS.gene067395:CDS 35.0%
!! AGAATTGTGAGTTTTGTAGG+AGG - chr2.4:1787628-1787647 MS.gene067395:CDS 35.0%
!! AGAGACTCTGAAATTGCAAT+GGG - chr2.4:1789105-1789124 MS.gene067395:intron 35.0%
!! AGATAGGTGGGTTGAAATAT+TGG - chr2.4:1786940-1786959 MS.gene067395:CDS 35.0%
!! CGAAGAATTGTGAGTTTTGT+AGG - chr2.4:1787625-1787644 MS.gene067395:CDS 35.0%
!! GGGTCTCAATCATTTTGAAA+AGG + chr2.4:1788697-1788716 None:intergenic 35.0%
!! TAGAGACTCTGAAATTGCAA+TGG - chr2.4:1789104-1789123 MS.gene067395:intron 35.0%
!! TAGATAAGTTGGTCCACATT+TGG - chr2.4:1788862-1788881 MS.gene067395:intron 35.0%
!! TCATCAGAAAATTTTGGTGG+TGG - chr2.4:1787567-1787586 MS.gene067395:CDS 35.0%
!!! ATTGTTTTTGCTCTCTGTGT+TGG - chr2.4:1785741-1785760 MS.gene067395:intron 35.0%
!!! TTTTAGGGTAGACTTTTGCT+TGG - chr2.4:1786424-1786443 MS.gene067395:CDS 35.0%
AAGAACGTCAAATAGTTCCG+AGG + chr2.4:1788420-1788439 None:intergenic 40.0%
AAGGTTCACTGTGTATGTTG+TGG - chr2.4:1788263-1788282 MS.gene067395:intron 40.0%
AATCGTGAGGTGGTAAAACA+AGG - chr2.4:1788450-1788469 MS.gene067395:intron 40.0%
AATGTACGCCCTTCCAATTA+AGG + chr2.4:1786888-1786907 None:intergenic 40.0%
ACAATCAACAACGACGTACA+TGG + chr2.4:1786608-1786627 None:intergenic 40.0%
ACCTCCTGCAAGTTGTATAT+TGG + chr2.4:1787164-1787183 None:intergenic 40.0%
ACGACGTACATGGGAAATAA+AGG + chr2.4:1786598-1786617 None:intergenic 40.0%
AGATTATATGCGAGCTCAAG+AGG - chr2.4:1788509-1788528 MS.gene067395:intron 40.0%
AGTCTACCCTAAAACGAACA+AGG + chr2.4:1786418-1786437 None:intergenic 40.0%
AGTGAGTTGCCAAATGAAGT+GGG - chr2.4:1787592-1787611 MS.gene067395:CDS 40.0%
ATATCGCCAATTGTATGGCT+AGG - chr2.4:1785864-1785883 MS.gene067395:CDS 40.0%
ATCATCAGGGAAAGTTACTG+GGG + chr2.4:1787929-1787948 None:intergenic 40.0%
ATGTTTCAAAAGACCGCAAC+TGG - chr2.4:1787023-1787042 MS.gene067395:CDS 40.0%
ATTCTTCACTTTCTGGGTGA+AGG + chr2.4:1789239-1789258 None:intergenic 40.0%
CAATAGAAAAAGGTGGTCCT+AGG - chr2.4:1787758-1787777 MS.gene067395:intron 40.0%
CAATCAACAACGACGTACAT+GGG + chr2.4:1786607-1786626 None:intergenic 40.0%
CACAAACCTAACAAAGATCC+AGG + chr2.4:1786297-1786316 None:intergenic 40.0%
CACACAAAGACAAGGTTGTA+AGG - chr2.4:1787096-1787115 MS.gene067395:CDS 40.0%
CAGTTCAGGCAATATTAGAC+TGG - chr2.4:1788322-1788341 MS.gene067395:intron 40.0%
CCCAATATTTGTCAGCAATC+TGG + chr2.4:1789278-1789297 None:intergenic 40.0%
CCTCCTGCAAGTTGTATATT+GGG + chr2.4:1787163-1787182 None:intergenic 40.0%
CCTGGTGCTTCAATAGAAAA+AGG - chr2.4:1787748-1787767 MS.gene067395:intron 40.0%
CTAAAGCTGGGCTTATTAGT+GGG - chr2.4:1788031-1788050 MS.gene067395:intron 40.0%
CTATGAACTCCTACCATCAA+AGG + chr2.4:1788994-1789013 None:intergenic 40.0%
CTCCTGCAAGTTGTATATTG+GGG + chr2.4:1787162-1787181 None:intergenic 40.0%
GAACTCAAAGGAAACAAACC+TGG - chr2.4:1786276-1786295 MS.gene067395:CDS 40.0%
GATCATCAGGGAAAGTTACT+GGG + chr2.4:1787930-1787949 None:intergenic 40.0%
GCTCGCATATAATCTGAATC+AGG + chr2.4:1788504-1788523 None:intergenic 40.0%
GCTTTCTACACACAAAGACA+AGG - chr2.4:1787088-1787107 MS.gene067395:CDS 40.0%
GGAGACCTACTAAATAGGAA+AGG + chr2.4:1788676-1788695 None:intergenic 40.0%
GGTCTCCTTTCCTATTTAGT+AGG - chr2.4:1788668-1788687 MS.gene067395:intron 40.0%
GGTGCTTCAATAGAAAAAGG+TGG - chr2.4:1787751-1787770 MS.gene067395:intron 40.0%
GTTCATGCCAAGATGATGAT+AGG - chr2.4:1788552-1788571 MS.gene067395:intron 40.0%
TACTATATGATGAGCGAGTG+AGG + chr2.4:1788738-1788757 None:intergenic 40.0%
TAGAAGCCTAGCCATACAAT+TGG + chr2.4:1785873-1785892 None:intergenic 40.0%
TAGAGATGAAGCCAAAACAG+TGG + chr2.4:1785324-1785343 None:intergenic 40.0%
TAGCACCATCCATTGATCTT+TGG + chr2.4:1789086-1789105 None:intergenic 40.0%
TATTTGACGTTCTTCTGCCT+TGG - chr2.4:1788426-1788445 MS.gene067395:intron 40.0%
TCACATTTACTGTGCCCATT+TGG - chr2.4:1786814-1786833 MS.gene067395:CDS 40.0%
TCAGGGAAGAATTCAAATCC+TGG + chr2.4:1789396-1789415 None:intergenic 40.0%
TCCATGTCTCTTGATCATCA+GGG + chr2.4:1787942-1787961 None:intergenic 40.0%
TCGGAAAAGTGAATGAAACG+GGG + chr2.4:1787683-1787702 None:intergenic 40.0%
TGATCATCAGGGAAAGTTAC+TGG + chr2.4:1787931-1787950 None:intergenic 40.0%
TGGTGAGGAAATAGATAGGT+GGG - chr2.4:1786928-1786947 MS.gene067395:CDS 40.0%
TGGTGGTAACATTCTTTCCA+AGG - chr2.4:1784917-1784936 MS.gene067395:CDS 40.0%
TGTTAGCAAGATTGAAGCTG+GGG - chr2.4:1788239-1788258 MS.gene067395:intron 40.0%
TGTTTCAAAAGACCGCAACT+GGG - chr2.4:1787024-1787043 MS.gene067395:CDS 40.0%
TTAACTTTGAGCAGAGATGG+AGG - chr2.4:1787839-1787858 MS.gene067395:intron 40.0%
TTACCAGCCTCATAGATGTT+GGG - chr2.4:1787189-1787208 MS.gene067395:CDS 40.0%
TTCCATGTCTCTTGATCATC+AGG + chr2.4:1787943-1787962 None:intergenic 40.0%
TTTCATCAGCCTAACTTTCC+TGG - chr2.4:1787730-1787749 MS.gene067395:intron 40.0%
TTTCCTTGGTAAGGGATTCA+AGG - chr2.4:1787284-1787303 MS.gene067395:CDS 40.0%
TTTGAGGAGACAGTTGGATT+CGG - chr2.4:1786683-1786702 MS.gene067395:CDS 40.0%
! AAGTGTAAAGAGATGGTGGT+TGG - chr2.4:1785628-1785647 MS.gene067395:intron 40.0%
! AGGAGCATGTTAATCCTCAA+TGG - chr2.4:1786780-1786799 MS.gene067395:CDS 40.0%
! AGTGTAAAGAGATGGTGGTT+GGG - chr2.4:1785629-1785648 MS.gene067395:intron 40.0%
! ATGCAAAGCACCAATGTCTT+CGG + chr2.4:1788190-1788209 None:intergenic 40.0%
! ATTGAAGCACCAGGAAAGTT+AGG + chr2.4:1787742-1787761 None:intergenic 40.0%
! ATTGAAGCACTCAATGCCAA+GGG - chr2.4:1788381-1788400 MS.gene067395:intron 40.0%
! CAAAACTTTGAGGAGACAGT+TGG - chr2.4:1786677-1786696 MS.gene067395:CDS 40.0%
! GATTTAGAGAAAGCACGAGT+TGG - chr2.4:1786737-1786756 MS.gene067395:CDS 40.0%
! GTAGAGTTTTGCCACTGTTT+TGG - chr2.4:1785310-1785329 MS.gene067395:intron 40.0%
! TAGAAAGCATAAGGAACTCC+AGG + chr2.4:1787076-1787095 None:intergenic 40.0%
! TATTGAAGCACTCAATGCCA+AGG - chr2.4:1788380-1788399 MS.gene067395:intron 40.0%
! TGTCTGGGATATGAGAATCT+TGG + chr2.4:1787132-1787151 None:intergenic 40.0%
! TGTTTGGGATGATAGAACGT+CGG - chr2.4:1787387-1787406 MS.gene067395:CDS 40.0%
!! AAGGAAGAAAAGAAGCACCT+TGG + chr2.4:1784937-1784956 None:intergenic 40.0%
!! ATTCCTGTTGAGGAGGTATT+GGG - chr2.4:1786905-1786924 MS.gene067395:CDS 40.0%
!! CCTTTTTCTATTGAAGCACC+AGG + chr2.4:1787751-1787770 None:intergenic 40.0%
!! GTAGTGAAGGACTAGTTAGT+TGG - chr2.4:1785488-1785507 MS.gene067395:intron 40.0%
!! TCATTCACTTTTCCGAACTC+TGG - chr2.4:1787687-1787706 MS.gene067395:intron 40.0%
!! TGAAGGACTAGTTAGTTGGA+AGG - chr2.4:1785492-1785511 MS.gene067395:intron 40.0%
AAGTAGTAAGTATGGGTGGG+AGG + chr2.4:1789455-1789474 None:intergenic 45.0%
ACAATGCTTCCACCATCATC+CGG + chr2.4:1787514-1787533 None:intergenic 45.0%
ACATCCTCCCAACATCTATG+AGG + chr2.4:1787199-1787218 None:intergenic 45.0%
ACTCAATGCCAAGGGAATTG+AGG - chr2.4:1788389-1788408 MS.gene067395:intron 45.0%
AGGATCTTCCTCAATTCCCT+TGG + chr2.4:1788400-1788419 None:intergenic 45.0%
AGGCAATATTAGACTGGCAG+AGG - chr2.4:1788328-1788347 MS.gene067395:intron 45.0%
AGGGAATTGAGGAAGATCCT+CGG - chr2.4:1788400-1788419 MS.gene067395:intron 45.0%
AGGTTTCTTGAAGCATGCCA+AGG + chr2.4:1789215-1789234 None:intergenic 45.0%
ATATCATGCCAAGGTTCCCT+AGG + chr2.4:1787778-1787797 None:intergenic 45.0%
ATCCTTATCGAAGCCTCTGA+TGG - chr2.4:1786333-1786352 MS.gene067395:CDS 45.0%
ATGGCGCAAATTCTGCTACA+TGG - chr2.4:1784846-1784865 MS.gene067395:CDS 45.0%
CAATATTAGACTGGCAGAGG+AGG - chr2.4:1788331-1788350 MS.gene067395:intron 45.0%
CAGTGAGTTGCCAAATGAAG+TGG - chr2.4:1787591-1787610 MS.gene067395:CDS 45.0%
CCAATTAAGGTTGCCCCAAT+AGG + chr2.4:1786875-1786894 None:intergenic 45.0%
CCCAATATACAACTTGCAGG+AGG - chr2.4:1787160-1787179 MS.gene067395:CDS 45.0%
CCTATTGGGGCAACCTTAAT+TGG - chr2.4:1786872-1786891 MS.gene067395:CDS 45.0%
CCTGAACTGATGCACTTTCT+GGG + chr2.4:1788311-1788330 None:intergenic 45.0%
CTGAAGATGCTGCTAAAGCT+GGG - chr2.4:1788019-1788038 MS.gene067395:intron 45.0%
CTTACCAGCCTCATAGATGT+TGG - chr2.4:1787188-1787207 MS.gene067395:CDS 45.0%
CTTGAGTGGATATCATGCCA+AGG + chr2.4:1787787-1787806 None:intergenic 45.0%
CTTGGCATGATATCCACTCA+AGG - chr2.4:1787785-1787804 MS.gene067395:intron 45.0%
GAAACTGAGGAATTCTTCCG+AGG - chr2.4:1787454-1787473 MS.gene067395:CDS 45.0%
GAGACAGTTGGATTCGGAAA+AGG - chr2.4:1786689-1786708 MS.gene067395:CDS 45.0%
GATATCCACTCAAGGCTTGA+AGG - chr2.4:1787793-1787812 MS.gene067395:intron 45.0%
GATGGTAGGAGTTCATAGTG+TGG - chr2.4:1788996-1789015 MS.gene067395:intron 45.0%
GCTAAAGCTGGGCTTATTAG+TGG - chr2.4:1788030-1788049 MS.gene067395:intron 45.0%
GGGCAAATGATTCATCACCT+TGG - chr2.4:1785832-1785851 MS.gene067395:CDS 45.0%
GGTATTAAGCCCGAAGACAT+TGG - chr2.4:1788177-1788196 MS.gene067395:intron 45.0%
GTCCCCAATATACAACTTGC+AGG - chr2.4:1787157-1787176 MS.gene067395:CDS 45.0%
GTGGTGAGGAAATAGATAGG+TGG - chr2.4:1786927-1786946 MS.gene067395:CDS 45.0%
TACTGGGGATGGGGTAATAA+TGG + chr2.4:1787914-1787933 None:intergenic 45.0%
TCCCTGATGATCAAGAGACA+TGG - chr2.4:1787938-1787957 MS.gene067395:intron 45.0%
TCCTTATCGAAGCCTCTGAT+GGG - chr2.4:1786334-1786353 MS.gene067395:CDS 45.0%
TGAATTCTTCCCTGACACCA+AGG - chr2.4:1789401-1789420 MS.gene067395:CDS 45.0%
TGGGGCAACCTTAATTGGAA+GGG - chr2.4:1786877-1786896 MS.gene067395:CDS 45.0%
TGGGTGGTGAGGAAATAGAT+AGG - chr2.4:1786924-1786943 MS.gene067395:CDS 45.0%
TGTATGTTGTGGTTCCCATG+TGG - chr2.4:1788274-1788293 MS.gene067395:intron 45.0%
TTACTGTGCCCATTTGGCAT+CGG - chr2.4:1786820-1786839 MS.gene067395:CDS 45.0%
TTCACTTTCTGGGTGAAGGA+AGG + chr2.4:1789235-1789254 None:intergenic 45.0%
TTGGGGCAACCTTAATTGGA+AGG - chr2.4:1786876-1786895 MS.gene067395:CDS 45.0%
! AAAGAGATGGTGGTTGGGAT+TGG - chr2.4:1785634-1785653 MS.gene067395:intron 45.0%
! CATTCCTGTTGAGGAGGTAT+TGG - chr2.4:1786904-1786923 MS.gene067395:CDS 45.0%
! GAATCAGGTTCTGGTCTTTC+AGG + chr2.4:1788489-1788508 None:intergenic 45.0%
! GGGAAAGTGTAAAGAGATGG+TGG - chr2.4:1785624-1785643 MS.gene067395:intron 45.0%
! TAGAGAAAGCACGAGTTGGA+AGG - chr2.4:1786741-1786760 MS.gene067395:CDS 45.0%
! TGCAAAGCACCAATGTCTTC+GGG + chr2.4:1788189-1788208 None:intergenic 45.0%
!! CATTTTAATGTCAGGCCGAC+AGG + chr2.4:1786147-1786166 None:intergenic 45.0%
ACCTTCTCCGCTATCCCATT+GGG - chr2.4:1789340-1789359 MS.gene067395:intron 50.0%
ACTCTTGAGCATGATCTCCC+TGG - chr2.4:1789315-1789334 MS.gene067395:intron 50.0%
AGCAGCATCTTCAGGAGTCT+CGG + chr2.4:1788013-1788032 None:intergenic 50.0%
AGCTAATAGGCAGCCTGCAA+GGG - chr2.4:1789149-1789168 MS.gene067395:intron 50.0%
AGCTGGGCTTATTAGTGGGA+AGG - chr2.4:1788035-1788054 MS.gene067395:intron 50.0%
AGGGAAAGTTACTGGGGATG+GGG + chr2.4:1787923-1787942 None:intergenic 50.0%
ATGGAGGAAGCAAGGTGGAA+AGG - chr2.4:1787855-1787874 MS.gene067395:intron 50.0%
ATGGTTTCCGCATGTCGTTG+TGG - chr2.4:1789181-1789200 MS.gene067395:intron 50.0%
ATTGACGGTGGAGCAGCTTT+CGG - chr2.4:1787982-1788001 MS.gene067395:intron 50.0%
CAGGGAAAGTTACTGGGGAT+GGG + chr2.4:1787924-1787943 None:intergenic 50.0%
CCTCCTTGAATCCCTTACCA+AGG + chr2.4:1787290-1787309 None:intergenic 50.0%
CCTGAAGATGCTGCTAAAGC+TGG - chr2.4:1788018-1788037 MS.gene067395:intron 50.0%
CCTTCACTGGAAACCCCAAT+GGG + chr2.4:1789357-1789376 None:intergenic 50.0%
CCTTGGTAAGGGATTCAAGG+AGG - chr2.4:1787287-1787306 MS.gene067395:CDS 50.0%
GATGTGCTGTGTCCAGAGTT+CGG + chr2.4:1787702-1787721 None:intergenic 50.0%
GCAAGATTGAAGCTGGGGAA+AGG - chr2.4:1788244-1788263 MS.gene067395:intron 50.0%
GCATCTTCAAGCTCTCTCAG+AGG + chr2.4:1787892-1787911 None:intergenic 50.0%
GCCTGAACTGATGCACTTTC+TGG + chr2.4:1788312-1788331 None:intergenic 50.0%
GCTCATACCACAACGACATG+CGG + chr2.4:1789191-1789210 None:intergenic 50.0%
GCTTGAAGGTCCCATTGCTT+GGG - chr2.4:1787807-1787826 MS.gene067395:intron 50.0%
TAATGCCTAGAGCCCAGTTG+CGG + chr2.4:1787039-1787058 None:intergenic 50.0%
TAGCTAATAGGCAGCCTGCA+AGG - chr2.4:1789148-1789167 MS.gene067395:intron 50.0%
TCAGGGAAAGTTACTGGGGA+TGG + chr2.4:1787925-1787944 None:intergenic 50.0%
TCCACGCATAGCAACTTCCA+AGG + chr2.4:1788149-1788168 None:intergenic 50.0%
TCCCATCAGAGGCTTCGATA+AGG + chr2.4:1786338-1786357 None:intergenic 50.0%
TCCTTCACTGGAAACCCCAA+TGG + chr2.4:1789358-1789377 None:intergenic 50.0%
TCCTTGGAAGTTGCTATGCG+TGG - chr2.4:1788145-1788164 MS.gene067395:intron 50.0%
TCGTTGTGGTATGAGCACCT+TGG - chr2.4:1789195-1789214 MS.gene067395:intron 50.0%
TGGAAACCCCAATGGGATAG+CGG + chr2.4:1789350-1789369 None:intergenic 50.0%
TGTCTTATGCCCTCGCAATC+CGG - chr2.4:1787492-1787511 MS.gene067395:CDS 50.0%
TTACCACCTCACGATTGCCA+AGG + chr2.4:1788446-1788465 None:intergenic 50.0%
! AAGGGCGTACATTCCTGTTG+AGG - chr2.4:1786895-1786914 MS.gene067395:CDS 50.0%
! CCAGCTTTAGCAGCATCTTC+AGG + chr2.4:1788021-1788040 None:intergenic 50.0%
! CCCAGAAAGTGCATCAGTTC+AGG - chr2.4:1788308-1788327 MS.gene067395:intron 50.0%
! TCAGGTTCTGGTCTTTCAGG+AGG + chr2.4:1788486-1788505 None:intergenic 50.0%
!! GGAGGCATTGATCTCTGTGA+TGG - chr2.4:1787646-1787665 MS.gene067395:intron 50.0%
!! TGAAGCACTGACACAGACAC+CGG - chr2.4:1785063-1785082 MS.gene067395:CDS 50.0%
AAAGACCGCAACTGGGCTCT+AGG - chr2.4:1787031-1787050 MS.gene067395:CDS 55.0%
AAGGTGGTCCTAGGGAACCT+TGG - chr2.4:1787767-1787786 MS.gene067395:intron 55.0%
ACCAAGGCTCGTGTTCTTGG+CGG - chr2.4:1789417-1789436 MS.gene067395:CDS 55.0%
AGACTGGCAGAGGAGGACAA+TGG - chr2.4:1788338-1788357 MS.gene067395:intron 55.0%
ATATGCGAGCTCAAGAGGCC+AGG - chr2.4:1788514-1788533 MS.gene067395:intron 55.0%
CACAGTGCACTTCAGAGCCT+CGG + chr2.4:1787474-1787493 None:intergenic 55.0%
CACCATCATCCGGATTGCGA+GGG + chr2.4:1787504-1787523 None:intergenic 55.0%
CACCTTCTCCGCTATCCCAT+TGG - chr2.4:1789339-1789358 MS.gene067395:intron 55.0%
CAGAGATGGAGGAAGCAAGG+TGG - chr2.4:1787850-1787869 MS.gene067395:intron 55.0%
CAGCATCTTCAGGAGTCTCG+GGG + chr2.4:1788011-1788030 None:intergenic 55.0%
CCAAGTGTGATGTCTCCTCC+TGG + chr2.4:1787319-1787338 None:intergenic 55.0%
CCACCCAATACCTCCTCAAC+AGG + chr2.4:1786911-1786930 None:intergenic 55.0%
CCAGCCTCATAGATGTTGGG+AGG - chr2.4:1787192-1787211 MS.gene067395:CDS 55.0%
CCAGGAGGAGACATCACACT+TGG - chr2.4:1787316-1787335 MS.gene067395:CDS 55.0%
CCATGAATCTGACCCCTTGC+AGG + chr2.4:1789165-1789184 None:intergenic 55.0%
CCCATTGGGGTTTCCAGTGA+AGG - chr2.4:1789354-1789373 MS.gene067395:intron 55.0%
CCTCCCAACATCTATGAGGC+TGG + chr2.4:1787195-1787214 None:intergenic 55.0%
CCTGCAAGGGGTCAGATTCA+TGG - chr2.4:1789162-1789181 MS.gene067395:intron 55.0%
CCTTCTCCGCTATCCCATTG+GGG - chr2.4:1789341-1789360 MS.gene067395:intron 55.0%
CTCTGTCACGCTTCCTTCAC+TGG + chr2.4:1789370-1789389 None:intergenic 55.0%
CTTCTGCCTTGGCAATCGTG+AGG - chr2.4:1788437-1788456 MS.gene067395:intron 55.0%
GACACCAAGGCTCGTGTTCT+TGG - chr2.4:1789414-1789433 MS.gene067395:CDS 55.0%
GAGCAGAGATGGAGGAAGCA+AGG - chr2.4:1787847-1787866 MS.gene067395:intron 55.0%
GATTCAAGGAGGCCAAAGCC+AGG - chr2.4:1787298-1787317 MS.gene067395:CDS 55.0%
GCAGCATCTTCAGGAGTCTC+GGG + chr2.4:1788012-1788031 None:intergenic 55.0%
GCTAATAGGCAGCCTGCAAG+GGG - chr2.4:1789150-1789169 MS.gene067395:intron 55.0%
GGCGTACATTCCTGTTGAGG+AGG - chr2.4:1786898-1786917 MS.gene067395:CDS 55.0%
GGCTTGAAGGTCCCATTGCT+TGG - chr2.4:1787806-1787825 MS.gene067395:intron 55.0%
GTGATGTCTCCTCCTGGCTT+TGG + chr2.4:1787313-1787332 None:intergenic 55.0%
TGGGACCTTCAAGCCTTGAG+TGG + chr2.4:1787801-1787820 None:intergenic 55.0%
TTGACGGTGGAGCAGCTTTC+GGG - chr2.4:1787983-1788002 MS.gene067395:intron 55.0%
!! AGAACACGAGCCTTGGTGTC+AGG + chr2.4:1789414-1789433 None:intergenic 55.0%
!! CAATGGGATAGCGGAGAAGG+TGG + chr2.4:1789341-1789360 None:intergenic 55.0%
!! CCTGTTGAGGAGGTATTGGG+TGG - chr2.4:1786908-1786927 MS.gene067395:CDS 55.0%
!! GAACACGAGCCTTGGTGTCA+GGG + chr2.4:1789413-1789432 None:intergenic 55.0%
!! TGAGGAGGTATTGGGTGGTG+AGG - chr2.4:1786913-1786932 MS.gene067395:CDS 55.0%
!! TGCTATGCGTGGAGTGCTGA+TGG - chr2.4:1788156-1788175 MS.gene067395:intron 55.0%
!! TGGTGGTTGGGATTGGTCCA+TGG - chr2.4:1785641-1785660 MS.gene067395:intron 55.0%
CCACCATCATCCGGATTGCG+AGG + chr2.4:1787505-1787524 None:intergenic 60.0%
CTGCCTTGGCAATCGTGAGG+TGG - chr2.4:1788440-1788459 MS.gene067395:intron 60.0%
GTGGTTCCCATGTGGCCTGA+GGG - chr2.4:1788282-1788301 MS.gene067395:intron 60.0%
TCAAGGAGGCCAAAGCCAGG+AGG - chr2.4:1787301-1787320 MS.gene067395:CDS 60.0%
TCCGCCAAGAACACGAGCCT+TGG + chr2.4:1789421-1789440 None:intergenic 60.0%
TGACACAGACACCGGACGGA+TGG - chr2.4:1785071-1785090 MS.gene067395:CDS 60.0%
TGCCCTCGCAATCCGGATGA+TGG - chr2.4:1787499-1787518 MS.gene067395:CDS 60.0%
TGCTGACGTGTCCATCCGTC+CGG + chr2.4:1785085-1785104 None:intergenic 60.0%
TGTGGTTCCCATGTGGCCTG+AGG - chr2.4:1788281-1788300 MS.gene067395:intron 60.0%
! CCTCGCAATCCGGATGATGG+TGG - chr2.4:1787502-1787521 MS.gene067395:CDS 60.0%
! GCACTGACACAGACACCGGA+CGG - chr2.4:1785067-1785086 MS.gene067395:CDS 60.0%
!! CCCCAATGGGATAGCGGAGA+AGG + chr2.4:1789344-1789363 None:intergenic 60.0%
!! GATAGCGGAGAAGGTGGCCA+GGG + chr2.4:1789335-1789354 None:intergenic 60.0%
!! GCACTTTCTGGGACACCCTC+AGG + chr2.4:1788300-1788319 None:intergenic 60.0%
GGGACACCCTCAGGCCACAT+GGG + chr2.4:1788291-1788310 None:intergenic 65.0%
TGGGACACCCTCAGGCCACA+TGG + chr2.4:1788292-1788311 None:intergenic 65.0%
! GGAAGCGTGACAGAGCTGCC+AGG - chr2.4:1789375-1789394 MS.gene067395:intron 65.0%
!! GGATAGCGGAGAAGGTGGCC+AGG + chr2.4:1789336-1789355 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr2.4 gene 1784846 1789476 1784846 ID=MS.gene067395
chr2.4 mRNA 1784846 1789476 1784846 ID=MS.gene067395.t1;Parent=MS.gene067395
chr2.4 exon 1789384 1789476 1789384 ID=MS.gene067395.t1.exon1;Parent=MS.gene067395.t1
chr2.4 CDS 1789384 1789476 1789384 ID=cds.MS.gene067395.t1;Parent=MS.gene067395.t1
chr2.4 exon 1785749 1787651 1785749 ID=MS.gene067395.t1.exon2;Parent=MS.gene067395.t1
chr2.4 CDS 1785749 1787651 1785749 ID=cds.MS.gene067395.t1;Parent=MS.gene067395.t1
chr2.4 exon 1784846 1785279 1784846 ID=MS.gene067395.t1.exon3;Parent=MS.gene067395.t1
chr2.4 CDS 1784846 1785279 1784846 ID=cds.MS.gene067395.t1;Parent=MS.gene067395.t1
Gene Sequence

>MS.gene067395

ATGGCGCAAATTCTGCTACATGGAACTCTTCATGCTACAATCTTTGAGGTCGATAAACTCAAGAATATTAGTGGTGGTAACATTCTTTCCAAGGTGCTTCTTTTCTTCCTTTTTTTTTTTGGCTTTTATTATCATTTTTTCAACTACTTGCTAACTGTTTTTTTACTTAACTTAGTTCTTATGTTTCTGTTATTTGTTTGTTGTACGGTTAGATCTATGAAGCACTGACACAGACACCGGACGGATGGACACGTCAGCACTGATAATATAAATTAATTGAATGTAATCACTAGTGTCTGTCGCGCACACACGCATTCAATCAGAAGTATCGGTGCTACTGAGATTAGATCATATAATTTAACAAAATTAGTGCAGTAGTTTGTTGTTAATCTCATCAATTTGTGATTCAGATTTCATGATCAATAATTCAATCTGAAATTTTGTTAGGTTAATTGTAATTTTTGGTAGAGTTTTGCCACTGTTTTGGCTTCATCTCTAATCTTCAAATCTGTGATCAGCTTGATGAGATTTGTTCTTTCAAACATGGAGATTGAATTTTCTTTGATCTTTGACTTGTAGCTTGTTGACTTTTCACGCCTTATCAGAAAGACTTGAACTGATAAACTCATAAATGTTTGAATGGTAGTGAAGGACTAGTTAGTTGGAAGGATAAAGGATTAATTTTTTTTTTCTTTCTAAGTCCGAAGATTTGATTTTTATTTTTTTATTTTTTGTGAAAAAGAAAAAGGGAAAAAATTAGATTGTAAGAATGAAAAAAGGGAAAGTGTAAAGAGATGGTGGTTGGGATTGGTCCATGGATAAGACAGAAGTTCATCAAGGCAAGAATATGTTTCTTACCAATCACATTTAATGTTCTTTTGTACTCAGAATCTTGATTGTTTTTGCTCTCTGTGTTGGTGAAATAATTGTTAGAAGAAAATAATAAGCTAAAAAAAGTAAATCACTTTAGGCCTTTAGAAGTTTTTGGGCAAATGATTCATCACCTTGGATTTTTATAATATCGCCAATTGTATGGCTAGGCTTCTAATAACAATATTTTAACGTCATTATTACTGTTGTAAATTTCTAACTGGATTGTAGAGTTTGCTAGCTATTATGTTTCAGACAGTTTATATATTCATTTAGATTATTAGGGATCACATAATGTTTTGCTACTTCAAATGTTTAATGTTTGATTTTAATTGTGAAGGGAAAGTTCTTCTTCAAAAAAAAATTGTGAAGGGAAAGTTTTTACAATGTTCTGCTTCCTTAATTTGTTCATTTGAATCTATTTGTCACCTGTCGGCCTGACATTAAAATGACCTTTTGTTCATTAAGCTGGTCTTTCAACTCAATAACTTCAAATTTTATCATACTTATCCTTTATCCTGCATATGCTATGTTTTATCCCAAAAAACATGAACACATATGAACTCAAAGGAAACAAACCTGGATCTTTGTTAGGTTTGTGTTAGTAGCTTGACTTCATCCTTATCGAAGCCTCTGATGGGATATTTTTAAGAATGGGTTCGAATGCTTTACCTTAACAATCTATTCTTTTGATCTTAACCTTGTTCGTTTTAGGGTAGACTTTTGCTTGGAGCTCCCTTCGTTTTAGCATAAGTGCATGCATATTTTTACTGAAGATCATCCACTTATGTTTACATGCGTTAGTGCCCTGATGAAAATATTTTTGTTTCACTTTTGTACCTTTATTACATGATGGAAGGATAATTTTTCACTTTTGGACCTTTATTTCCCATGTACGTCGTTGTTGATTGTTGATTTATGTGTTGCTAATTACATTCACTTATTCTTTTTTTAGATAAGACAAAACTTTGAGGAGACAGTTGGATTCGGAAAAGGAACTACCAAACTTTATGCAACCATTGATTTAGAGAAAGCACGAGTTGGAAGGACCAGAATCATAGAAAAGGAGCATGTTAATCCTCAATGGAATGAGTCTTTTCACATTTACTGTGCCCATTTGGCATCGGATATCATATTCACTGTGAAAGATGATAATCCTATTGGGGCAACCTTAATTGGAAGGGCGTACATTCCTGTTGAGGAGGTATTGGGTGGTGAGGAAATAGATAGGTGGGTTGAAATATTGGATGTGAATAAAGAACCAATTCATGGAAATTCAAAGATCCATGTGAAGCTGCAATTTTTTGATGTTTCAAAAGACCGCAACTGGGCTCTAGGCATTAGAAGTCCTAAATTTCCTGGAGTTCCTTATGCTTTCTACACACAAAGACAAGGTTGTAAGGTTTCTCTGTACCAAGATTCTCATATCCCAGACAATTTTGTCCCCAATATACAACTTGCAGGAGGTCAGACTTACCAGCCTCATAGATGTTGGGAGGATGTTTTTGATGCAATCACAAAAGCAAGGCACTTAATATACATTACAGGGTGGTCTGTTTATACTGAGATTTCCTTGGTAAGGGATTCAAGGAGGCCAAAGCCAGGAGGAGACATCACACTTGGTGAGCTTCTCAAGAAAAAAGCACAAGAAGGTGTTAGGGTATTAATGCTTGTTTGGGATGATAGAACGTCGGTTCCTCTGTTAAAAAAAGATGGGTTGATGGCTACTCATGATCAAGAAACTGAGGAATTCTTCCGAGGCTCTGAAGTGCACTGTGTCTTATGCCCTCGCAATCCGGATGATGGTGGAAGCATTGTCCAGAATATAGAAATTGGCACCATGTTTACTCATCATCAGAAAATTTTGGTGGTGGACAGTGAGTTGCCAAATGAAGTGGGATTAAATAAACGAAGAATTGTGAGTTTTGTAGGAGGCATTGATCTCTGTGATGGAAGATATGATACCCCGTTTCATTCACTTTTCCGAACTCTGGACACAGCACATCATGATGACTTTCATCAGCCTAACTTTCCTGGTGCTTCAATAGAAAAAGGTGGTCCTAGGGAACCTTGGCATGATATCCACTCAAGGCTTGAAGGTCCCATTGCTTGGGATGTTTTGTTTAACTTTGAGCAGAGATGGAGGAAGCAAGGTGGAAAGGACTTGCTTGTTCCTCTGAGAGAGCTTGAAGATGCCATTATTACCCCATCCCCAGTAACTTTCCCTGATGATCAAGAGACATGGAATGTTCAGCTATTTAGATCTATTGACGGTGGAGCAGCTTTCGGGTTCCCCGAGACTCCTGAAGATGCTGCTAAAGCTGGGCTTATTAGTGGGAAGGATAACATAATAGATAGGAGTATTCAAGATGCTTATATCAATGCTATTCGACGCGCAAAGAATTTCATCTACATTGAAAATCAATATTTCCTTGGAAGTTGCTATGCGTGGAGTGCTGATGGTATTAAGCCCGAAGACATTGGTGCTTTGCATCTGATCCCAAAAGAGCTTTCACTTAAGATTGTTAGCAAGATTGAAGCTGGGGAAAGGTTCACTGTGTATGTTGTGGTTCCCATGTGGCCTGAGGGTGTCCCAGAAAGTGCATCAGTTCAGGCAATATTAGACTGGCAGAGGAGGACAATGGATATGATGTACAAAGATATTATTGAAGCACTCAATGCCAAGGGAATTGAGGAAGATCCTCGGAACTATTTGACGTTCTTCTGCCTTGGCAATCGTGAGGTGGTAAAACAAGGAGAGTACGAGCCTCCTGAAAGACCAGAACCTGATTCAGATTATATGCGAGCTCAAGAGGCCAGGCGTTTCATGATTTATGTTCATGCCAAGATGATGATAGGTAAGTAAAAACATTAAGCTGCCATATTTTGTATAACATTCCTTCTAACACTTTCTTTCCAATACTTTTTTTATGATTGAGCAATGTTCACATGGGTCTCCTTTCCTATTTAGTAGGTCTCCTTTTCAAAATGATTGAGACCCACATGAATTTTACTCAAACCTCACTCGCTCATCATATAGTAGTCAAGAGCAATTCTGCAAGCTACACAATTCTCACGCAGAATTTTGATTTTAAAGTTATTTGTAGGATAAAAGGAAAAAAATTACTTTATTCTAATTATTCATTTAGATAAGTTGGTCCACATTTGGACAAAAAAATTCTTGAGAAGTTTTTTTACTCTTTCAACAAATTTGAGATTAATAAAAGAAAGCTGGTAAGTGTTACAATATCCCTTTTCCTTCACCAAGAAAATATCCTTTGATGGTAGGAGTTCATAGTGTGGTAAAACTAAGTTTGTTGTTTGCAGTTGATGATGAATACATAATCGTCGGATCTGCCAACATCAACCAAAGATCAATGGATGGTGCTAGAGACTCTGAAATTGCAATGGGAGCTTATCAACCCTATCATTTAGCTAATAGGCAGCCTGCAAGGGGTCAGATTCATGGTTTCCGCATGTCGTTGTGGTATGAGCACCTTGGCATGCTTCAAGAAACCTTCCTTCACCCAGAAAGTGAAGAATGCATTAGGAAGGTGAACCAGATTGCTGACAAATATTGGGATCTCTATTCTAGCGAGACTCTTGAGCATGATCTCCCTGGCCACCTTCTCCGCTATCCCATTGGGGTTTCCAGTGAAGGAAGCGTGACAGAGCTGCCAGGATTTGAATTCTTCCCTGACACCAAGGCTCGTGTTCTTGGCGGAAAAGTTGATTACCTCCCACCCATACTTACTACTTAG
Protein sequence

>MS.gene067395.t1

MAQILLHGTLHATIFEVDKLKNISGGNILSKIRQNFEETVGFGKGTTKLYATIDLEKARVGRTRIIEKEHVNPQWNESFHIYCAHLASDIIFTVKDDNPIGATLIGRAYIPVEEVLGGEEIDRWVEILDVNKEPIHGNSKIHVKLQFFDVSKDRNWALGIRSPKFPGVPYAFYTQRQGCKVSLYQDSHIPDNFVPNIQLAGGQTYQPHRCWEDVFDAITKARHLIYITGWSVYTEISLVRDSRRPKPGGDITLGELLKKKAQEGVRVLMLVWDDRTSVPLLKKDGLMATHDQETEEFFRGSEVHCVLCPRNPDDGGSIVQNIEIGTMFTHHQKILVVDSELPNEVGLNKRRIVSFVGGIDLCDGRYDTPFHSLFRTLDTAHHDDFHQPNFPGASIEKGGPREPWHDIHSRLEGPIAWDVLFNFEQRWRKQGGKDLLVPLRELEDAIITPSPVTFPDDQETWNVQLFRSIDGGAAFGFPETPEDAAKAGLISGKDNIIDRSIQDAYINAIRRAKNFIYIENQYFLGSCYAWSADGIKPEDIGALHLIPKELSLKIVSKIEAGERFTVYVVVPMWPEGVPESASVQAILDWQRRTMDMMYKDIIEALNAKGIEEDPRNYLTFFCLGNREVVKQGEYEPPERPEPDSDYMRAQEARRFMIYVHAKMMIVDDEYIIVGSANINQRSMDGARDSEIAMGAYQPYHLANRQPARGQIHGFRMSLWYEHLGMLQETFLHPESEECIRKVNQIADKYWDLYSSETLEHDLPGHLLRYPIGVSSEGSVTELPGFEFFPDTKARVLGGKVDYLPPILTT