Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068775.t1 | XP_003598026.1 | 97 | 197 | 6 | 0 | 1 | 197 | 1 | 197 | 4.50E-102 | 380.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068775.t1 | Q9FLF0 | 88.3 | 197 | 23 | 0 | 1 | 197 | 1 | 197 | 2.1e-95 | 349.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068775.t1 | B7FMD4 | 97.0 | 197 | 6 | 0 | 1 | 197 | 1 | 197 | 3.3e-102 | 380.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049306 | MS.gene068775 | 0.8161 | 6.58E-52 | -1.69E-46 |
| MS.gene051927 | MS.gene068775 | 0.809867 | 1.53E-50 | -1.69E-46 |
| MS.gene05491 | MS.gene068775 | 0.847933 | 8.45E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene05867 | MS.gene068775 | PPI |
| MS.gene66593 | MS.gene068775 | PPI |
| MS.gene068775 | MS.gene015811 | PPI |
| MS.gene049071 | MS.gene068775 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068775.t1 | MTR_4g021290 | 96.954 | 197 | 6 | 0 | 1 | 197 | 1 | 197 | 3.00e-142 | 394 |
| MS.gene068775.t1 | MTR_3g005450 | 96.954 | 197 | 6 | 0 | 1 | 197 | 1 | 197 | 3.00e-142 | 394 |
| MS.gene068775.t1 | MTR_3g005430 | 96.954 | 197 | 6 | 0 | 1 | 197 | 1 | 197 | 3.00e-142 | 394 |
| MS.gene068775.t1 | MTR_7g067490 | 95.722 | 187 | 8 | 0 | 1 | 187 | 1 | 187 | 3.31e-126 | 353 |
| MS.gene068775.t1 | MTR_1g068965 | 94.972 | 179 | 9 | 0 | 1 | 179 | 28 | 206 | 9.56e-125 | 351 |
| MS.gene068775.t1 | MTR_4g108310 | 93.043 | 115 | 8 | 0 | 1 | 115 | 1 | 115 | 1.30e-75 | 223 |
| MS.gene068775.t1 | MTR_4g108305 | 100.000 | 38 | 0 | 0 | 138 | 175 | 21 | 58 | 3.07e-22 | 85.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene068775.t1 | AT5G39850 | 88.770 | 187 | 21 | 0 | 1 | 187 | 1 | 187 | 5.15e-122 | 343 |
| MS.gene068775.t1 | AT5G15200 | 82.828 | 198 | 33 | 1 | 1 | 197 | 1 | 198 | 2.03e-115 | 327 |
| MS.gene068775.t1 | AT5G15200 | 86.861 | 137 | 18 | 0 | 1 | 137 | 1 | 137 | 4.16e-84 | 246 |
Find 63 sgRNAs with CRISPR-Local
Find 103 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCCCATAGTTTCGGTAAAA+TGG | 0.192500 | 2.3:+18274284 | None:intergenic |
| CCCTTTGGTGGTGGTCTTCC+TGG | 0.197404 | 2.3:-18273243 | MS.gene068775:CDS |
| ATCACCACCAGAAGCCTTCT+TGG | 0.255696 | 2.3:+18273188 | None:intergenic |
| CAGACTCTTGTCTTCAAATC+TGG | 0.288805 | 2.3:-18273963 | MS.gene068775:CDS |
| TTGAAGCTGGTCGGAGAGTA+TGG | 0.314070 | 2.3:-18274209 | MS.gene068775:CDS |
| CCTTCTTGGCTGCAGCCTTA+AGG | 0.354248 | 2.3:+18273202 | None:intergenic |
| ACCATGCTAGGGTTCTTATC+AGG | 0.369101 | 2.3:-18273923 | MS.gene068775:CDS |
| TGGACGACGGGGCTTCTTGA+AGG | 0.391435 | 2.3:+18274259 | None:intergenic |
| CTCCTTCTCGTATGGACGAC+GGG | 0.404289 | 2.3:+18274247 | None:intergenic |
| GCTGCAGCCAAGAAGGCTTC+TGG | 0.408125 | 2.3:-18273195 | MS.gene068775:CDS |
| TCCATACGAGAAGGAGCGTT+TGG | 0.432310 | 2.3:-18274240 | MS.gene068775:CDS |
| TCTTCTCATCCAATGTCAAA+AGG | 0.436967 | 2.3:+18274117 | None:intergenic |
| TCCCTCACCAGTCCCTTTGG+TGG | 0.444838 | 2.3:-18273255 | MS.gene068775:CDS |
| TTATCAGGCAGAGACACATT+AGG | 0.445935 | 2.3:-18273908 | MS.gene068775:intron |
| CCTAGCATGGTGAATGGACT+TGG | 0.448468 | 2.3:+18273935 | None:intergenic |
| TTCTTTCGCTTCACGCGACC+AGG | 0.452567 | 2.3:+18273225 | None:intergenic |
| TTCTAGCATTGTTACGGATA+CGG | 0.467109 | 2.3:+18274141 | None:intergenic |
| CTCACCAGTCCCTTTGGTGG+TGG | 0.469552 | 2.3:-18273252 | MS.gene068775:CDS |
| ACCAGGAAGACCACCACCAA+AGG | 0.473047 | 2.3:+18273242 | None:intergenic |
| AAAGGGTTCTAGCATTGTTA+CGG | 0.475438 | 2.3:+18274135 | None:intergenic |
| AGTGAACATCCCATCCTTCA+TGG | 0.476720 | 2.3:-18273310 | MS.gene068775:CDS |
| GAACCCTCGTCGGATCTTTG+AGG | 0.484508 | 2.3:-18274096 | MS.gene068775:CDS |
| AAGAAGGCTTCTGGTGGTGA+TGG | 0.495137 | 2.3:-18273186 | MS.gene068775:CDS |
| AACCCTCGTCGGATCTTTGA+GGG | 0.508041 | 2.3:-18274095 | MS.gene068775:CDS |
| CTTCTCATCCAATGTCAAAA+GGG | 0.512873 | 2.3:+18274118 | None:intergenic |
| CCTTAAGGCTGCAGCCAAGA+AGG | 0.517095 | 2.3:-18273202 | MS.gene068775:CDS |
| TCCAAACGCTCCTTCTCGTA+TGG | 0.519540 | 2.3:+18274239 | None:intergenic |
| CCAAGTCCATTCACCATGCT+AGG | 0.525789 | 2.3:-18273935 | MS.gene068775:CDS |
| TCAACCCTCACCATGAAGGA+TGG | 0.531047 | 2.3:+18273300 | None:intergenic |
| AAGAACCCTAGCATGGTGAA+TGG | 0.539163 | 2.3:+18273929 | None:intergenic |
| CGTGAAGCGAAAGAACCTTA+AGG | 0.541128 | 2.3:-18273217 | MS.gene068775:CDS |
| TGGTCGGAGAGTATGGTCTT+CGG | 0.541482 | 2.3:-18274202 | MS.gene068775:CDS |
| GTTTCGGTAAAATGGAATGT+GGG | 0.544915 | 2.3:+18274292 | None:intergenic |
| TTGAGGAGAATGTTTAAGCA+TGG | 0.560766 | 2.3:-18274062 | MS.gene068775:CDS |
| CAACCCTCACCATGAAGGAT+GGG | 0.569875 | 2.3:+18273301 | None:intergenic |
| AAGACCACCACCAAAGGGAC+TGG | 0.570564 | 2.3:+18273248 | None:intergenic |
| TGAATCAACCCTCACCATGA+AGG | 0.571223 | 2.3:+18273296 | None:intergenic |
| ACCACCAAAGGGACTGGTGA+GGG | 0.576930 | 2.3:+18273254 | None:intergenic |
| GAACAAGCTCGATTATGTGT+TGG | 0.578338 | 2.3:-18274021 | MS.gene068775:CDS |
| TTTGGATGCTGAGTTGAAGC+TGG | 0.579570 | 2.3:-18274222 | MS.gene068775:CDS |
| CCAGGAAGACCACCACCAAA+GGG | 0.581024 | 2.3:+18273243 | None:intergenic |
| GGTGTAAGAGAGAGCTGTGG+AGG | 0.589621 | 2.3:-18274181 | MS.gene068775:CDS |
| TTCTGGTGGTGATGGAGATG+AGG | 0.590267 | 2.3:-18273178 | MS.gene068775:CDS |
| AGTTTCGGTAAAATGGAATG+TGG | 0.592077 | 2.3:+18274291 | None:intergenic |
| CATCCCATCCTTCATGGTGA+GGG | 0.593258 | 2.3:-18273304 | MS.gene068775:CDS |
| TCTTGTCTTCAAATCTGGCA+TGG | 0.593384 | 2.3:-18273958 | MS.gene068775:CDS |
| CAAGTCCATTCACCATGCTA+GGG | 0.599707 | 2.3:-18273934 | MS.gene068775:CDS |
| GCAGCCAAGAAGGCTTCTGG+TGG | 0.599775 | 2.3:-18273192 | MS.gene068775:CDS |
| ACATCCCATCCTTCATGGTG+AGG | 0.616704 | 2.3:-18273305 | MS.gene068775:CDS |
| GCCCCGTCGTCCATACGAGA+AGG | 0.617765 | 2.3:-18274249 | MS.gene068775:CDS |
| TGAAGACAAGAGTCTGAAGA+CGG | 0.630423 | 2.3:+18273970 | None:intergenic |
| TTTCGGTAAAATGGAATGTG+GGG | 0.638887 | 2.3:+18274293 | None:intergenic |
| GATGCTGAGTTGAAGCTGGT+CGG | 0.640820 | 2.3:-18274218 | MS.gene068775:CDS |
| GCCTGATAAGAACCCTAGCA+TGG | 0.650504 | 2.3:+18273922 | None:intergenic |
| CACCACCAAAGGGACTGGTG+AGG | 0.654247 | 2.3:+18273253 | None:intergenic |
| GCTCCTTCTCGTATGGACGA+CGG | 0.657592 | 2.3:+18274246 | None:intergenic |
| TGGTGGTGATGGAGATGAGG+AGG | 0.657794 | 2.3:-18273175 | MS.gene068775:CDS |
| GTGTAAGAGAGAGCTGTGGA+GGG | 0.669438 | 2.3:-18274180 | MS.gene068775:CDS |
| TTCGGTGTAAGAGAGAGCTG+TGG | 0.694839 | 2.3:-18274184 | MS.gene068775:CDS |
| TGGATGAGAAGAACCCTCGT+CGG | 0.698285 | 2.3:-18274106 | MS.gene068775:CDS |
| TCCTTCTCGTATGGACGACG+GGG | 0.706036 | 2.3:+18274248 | None:intergenic |
| CACCCTCAAAGATCCGACGA+GGG | 0.706490 | 2.3:+18274093 | None:intergenic |
| TCACCCTCAAAGATCCGACG+AGG | 0.715310 | 2.3:+18274092 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATTTAATAATTAATGTATT+TGG | - | chr2.3:18273795-18273814 | MS.gene068775:intron | 10.0% |
| !! | TATTTATTTAATTGTAAGTT+TGG | - | chr2.3:18273598-18273617 | MS.gene068775:intron | 10.0% |
| !!! | ATATCATTTTTTGTTTTCAT+AGG | - | chr2.3:18274113-18274132 | MS.gene068775:CDS | 15.0% |
| !!! | TATCATTTTTTGTTTTCATA+GGG | - | chr2.3:18274114-18274133 | MS.gene068775:CDS | 15.0% |
| !!! | GAGAATCTTTTCTTATATAT+AGG | - | chr2.3:18273864-18273883 | MS.gene068775:intron | 20.0% |
| !!! | TGTATAAAGAATCTTTTAAC+CGG | + | chr2.3:18273777-18273796 | None:intergenic | 20.0% |
| ! | AGAAAACCCAATCAAATAAA+AGG | + | chr2.3:18274050-18274069 | None:intergenic | 25.0% |
| ! | TAAAAGGCAGAAATAAACAA+AGG | + | chr2.3:18274034-18274053 | None:intergenic | 25.0% |
| !! | ACAAAGGTTTAAGCAAATTT+TGG | + | chr2.3:18274018-18274037 | None:intergenic | 25.0% |
| !! | ATGTCAATAGAACTTACTTT+TGG | - | chr2.3:18273689-18273708 | MS.gene068775:intron | 25.0% |
| !! | TCTTTTCTTATATATAGGAC+CGG | - | chr2.3:18273869-18273888 | MS.gene068775:intron | 25.0% |
| !!! | ATTTCTGCCTTTTATTTGAT+TGG | - | chr2.3:18274040-18274059 | MS.gene068775:CDS | 25.0% |
| !!! | ATTTTTTGTTTTCATAGGGT+TGG | - | chr2.3:18274118-18274137 | MS.gene068775:CDS | 25.0% |
| !!! | TGTCAATAGAACTTACTTTT+GGG | - | chr2.3:18273690-18273709 | MS.gene068775:intron | 25.0% |
| !!! | TTTCTGCCTTTTATTTGATT+GGG | - | chr2.3:18274041-18274060 | MS.gene068775:CDS | 25.0% |
| !!! | TTTTTTGTTTTCATAGGGTT+GGG | - | chr2.3:18274119-18274138 | MS.gene068775:CDS | 25.0% |
| AAACACAAAATTGTGCAAAC+AGG | + | chr2.3:18273734-18273753 | None:intergenic | 30.0% | |
| AACACAAAATTGTGCAAACA+GGG | + | chr2.3:18273733-18273752 | None:intergenic | 30.0% | |
| ! | ATAAAGAATCTTTTAACCGG+AGG | + | chr2.3:18273774-18273793 | None:intergenic | 30.0% |
| ! | ATCTGAGAGTTCGAATTTTT+GGG | - | chr2.3:18273642-18273661 | MS.gene068775:intron | 30.0% |
| ! | ATTCCATTTTACCGAAACTA+TGG | - | chr2.3:18273173-18273192 | MS.gene068775:CDS | 30.0% |
| ! | TAAAGAATCTTTTAACCGGA+GGG | + | chr2.3:18273773-18273792 | None:intergenic | 30.0% |
| ! | TTCCATTTTACCGAAACTAT+GGG | - | chr2.3:18273174-18273193 | MS.gene068775:CDS | 30.0% |
| !! | GTTTAAGCAAATTTTGGCAA+TGG | + | chr2.3:18274012-18274031 | None:intergenic | 30.0% |
| AAAATCTTGTATACTCGCTC+CGG | + | chr2.3:18273891-18273910 | None:intergenic | 35.0% | |
| ACTATAGACACGTAAAGACT+TGG | + | chr2.3:18273954-18273973 | None:intergenic | 35.0% | |
| AGTCTTTACGTGTCTATAGT+TGG | - | chr2.3:18273954-18273973 | MS.gene068775:CDS | 35.0% | |
| AGTTTCGGTAAAATGGAATG+TGG | + | chr2.3:18273172-18273191 | None:intergenic | 35.0% | |
| CAATGGCAACAAAACATGTA+AGG | + | chr2.3:18273995-18274014 | None:intergenic | 35.0% | |
| CTTCTCATCCAATGTCAAAA+GGG | + | chr2.3:18273345-18273364 | None:intergenic | 35.0% | |
| GTTTCGGTAAAATGGAATGT+GGG | + | chr2.3:18273171-18273190 | None:intergenic | 35.0% | |
| TCATCGTTGTGAAACATGTT+TGG | - | chr2.3:18274078-18274097 | MS.gene068775:CDS | 35.0% | |
| TCTTCTCATCCAATGTCAAA+AGG | + | chr2.3:18273346-18273365 | None:intergenic | 35.0% | |
| TTCCCATAGTTTCGGTAAAA+TGG | + | chr2.3:18273179-18273198 | None:intergenic | 35.0% | |
| TTCTAGCATTGTTACGGATA+CGG | + | chr2.3:18273322-18273341 | None:intergenic | 35.0% | |
| TTGAGGAGAATGTTTAAGCA+TGG | - | chr2.3:18273398-18273417 | MS.gene068775:intron | 35.0% | |
| TTTCGGTAAAATGGAATGTG+GGG | + | chr2.3:18273170-18273189 | None:intergenic | 35.0% | |
| ! | AAAGGGTTCTAGCATTGTTA+CGG | + | chr2.3:18273328-18273347 | None:intergenic | 35.0% |
| ! | CATCTGAGAGTTCGAATTTT+TGG | - | chr2.3:18273641-18273660 | MS.gene068775:intron | 35.0% |
| ! | TCCAAGACAAAAAGTATGCT+TGG | - | chr2.3:18273920-18273939 | MS.gene068775:CDS | 35.0% |
| ! | TGAAGGTTTTCCCATAGTTT+CGG | + | chr2.3:18273187-18273206 | None:intergenic | 35.0% |
| !! | ACCAAGCATACTTTTTGTCT+TGG | + | chr2.3:18273924-18273943 | None:intergenic | 35.0% |
| CAGACTCTTGTCTTCAAATC+TGG | - | chr2.3:18273497-18273516 | MS.gene068775:intron | 40.0% | |
| GAACAAGCTCGATTATGTGT+TGG | - | chr2.3:18273439-18273458 | MS.gene068775:intron | 40.0% | |
| GGCAACAAAACATGTAAGGA+AGG | + | chr2.3:18273991-18274010 | None:intergenic | 40.0% | |
| TCTTGTCTTCAAATCTGGCA+TGG | - | chr2.3:18273502-18273521 | MS.gene068775:intron | 40.0% | |
| TGAAGACAAGAGTCTGAAGA+CGG | + | chr2.3:18273493-18273512 | None:intergenic | 40.0% | |
| TTATCAGGCAGAGACACATT+AGG | - | chr2.3:18273552-18273571 | MS.gene068775:intron | 40.0% | |
| ! | TGCTAGAACCCTTTTGACAT+TGG | - | chr2.3:18273334-18273353 | MS.gene068775:intron | 40.0% |
| !! | GTCTTATTTACTACTCCCTC+CGG | - | chr2.3:18273755-18273774 | MS.gene068775:intron | 40.0% |
| !! | TTTGTTTTCATAGGGTTGGG+AGG | - | chr2.3:18274122-18274141 | MS.gene068775:CDS | 40.0% |
| AAGAACCCTAGCATGGTGAA+TGG | + | chr2.3:18273534-18273553 | None:intergenic | 45.0% | |
| ACCATGCTAGGGTTCTTATC+AGG | - | chr2.3:18273537-18273556 | MS.gene068775:intron | 45.0% | |
| AGTGAACATCCCATCCTTCA+TGG | - | chr2.3:18274150-18274169 | MS.gene068775:CDS | 45.0% | |
| CAAGTCCATTCACCATGCTA+GGG | - | chr2.3:18273526-18273545 | MS.gene068775:intron | 45.0% | |
| CGTGAAGCGAAAGAACCTTA+AGG | - | chr2.3:18274243-18274262 | MS.gene068775:CDS | 45.0% | |
| TGAATCAACCCTCACCATGA+AGG | + | chr2.3:18274167-18274186 | None:intergenic | 45.0% | |
| ! | TTTGGATGCTGAGTTGAAGC+TGG | - | chr2.3:18273238-18273257 | MS.gene068775:CDS | 45.0% |
| AACCCTCGTCGGATCTTTGA+GGG | - | chr2.3:18273365-18273384 | MS.gene068775:intron | 50.0% | |
| ACATCCCATCCTTCATGGTG+AGG | - | chr2.3:18274155-18274174 | MS.gene068775:CDS | 50.0% | |
| ATCACCACCAGAAGCCTTCT+TGG | + | chr2.3:18274275-18274294 | None:intergenic | 50.0% | |
| CAACCCTCACCATGAAGGAT+GGG | + | chr2.3:18274162-18274181 | None:intergenic | 50.0% | |
| CATCCCATCCTTCATGGTGA+GGG | - | chr2.3:18274156-18274175 | MS.gene068775:CDS | 50.0% | |
| CCAAGTCCATTCACCATGCT+AGG | - | chr2.3:18273525-18273544 | MS.gene068775:intron | 50.0% | |
| GCCTGATAAGAACCCTAGCA+TGG | + | chr2.3:18273541-18273560 | None:intergenic | 50.0% | |
| GTGTAAGAGAGAGCTGTGGA+GGG | - | chr2.3:18273280-18273299 | MS.gene068775:CDS | 50.0% | |
| TCAACCCTCACCATGAAGGA+TGG | + | chr2.3:18274163-18274182 | None:intergenic | 50.0% | |
| TCCAAACGCTCCTTCTCGTA+TGG | + | chr2.3:18273224-18273243 | None:intergenic | 50.0% | |
| TGGATGAGAAGAACCCTCGT+CGG | - | chr2.3:18273354-18273373 | MS.gene068775:intron | 50.0% | |
| TTGAAGCTGGTCGGAGAGTA+TGG | - | chr2.3:18273251-18273270 | MS.gene068775:CDS | 50.0% | |
| ! | AAGAAGGCTTCTGGTGGTGA+TGG | - | chr2.3:18274274-18274293 | MS.gene068775:CDS | 50.0% |
| ! | CCTAGCATGGTGAATGGACT+TGG | + | chr2.3:18273528-18273547 | None:intergenic | 50.0% |
| ! | GATGCTGAGTTGAAGCTGGT+CGG | - | chr2.3:18273242-18273261 | MS.gene068775:CDS | 50.0% |
| ! | TGGTCGGAGAGTATGGTCTT+CGG | - | chr2.3:18273258-18273277 | MS.gene068775:CDS | 50.0% |
| ! | TTCGGTGTAAGAGAGAGCTG+TGG | - | chr2.3:18273276-18273295 | MS.gene068775:CDS | 50.0% |
| ! | TTGAGGGTGACGCACTTTTG+AGG | - | chr2.3:18273381-18273400 | MS.gene068775:intron | 50.0% |
| ! | TTTTCATAGGGTTGGGAGGC+AGG | - | chr2.3:18274126-18274145 | MS.gene068775:CDS | 50.0% |
| ! | TTTTCCCTCACCAGTCCCTT+TGG | - | chr2.3:18274202-18274221 | MS.gene068775:CDS | 50.0% |
| !! | TCCATACGAGAAGGAGCGTT+TGG | - | chr2.3:18273220-18273239 | MS.gene068775:CDS | 50.0% |
| !! | TTCTGGTGGTGATGGAGATG+AGG | - | chr2.3:18274282-18274301 | MS.gene068775:CDS | 50.0% |
| AAGACCACCACCAAAGGGAC+TGG | + | chr2.3:18274215-18274234 | None:intergenic | 55.0% | |
| ACCAGGAAGACCACCACCAA+AGG | + | chr2.3:18274221-18274240 | None:intergenic | 55.0% | |
| CACCCTCAAAGATCCGACGA+GGG | + | chr2.3:18273370-18273389 | None:intergenic | 55.0% | |
| CCAGGAAGACCACCACCAAA+GGG | + | chr2.3:18274220-18274239 | None:intergenic | 55.0% | |
| CCTTAAGGCTGCAGCCAAGA+AGG | - | chr2.3:18274258-18274277 | MS.gene068775:CDS | 55.0% | |
| CCTTCTTGGCTGCAGCCTTA+AGG | + | chr2.3:18274261-18274280 | None:intergenic | 55.0% | |
| CTCCTTCTCGTATGGACGAC+GGG | + | chr2.3:18273216-18273235 | None:intergenic | 55.0% | |
| GAACCCTCGTCGGATCTTTG+AGG | - | chr2.3:18273364-18273383 | MS.gene068775:intron | 55.0% | |
| GCTCCTTCTCGTATGGACGA+CGG | + | chr2.3:18273217-18273236 | None:intergenic | 55.0% | |
| GGTGTAAGAGAGAGCTGTGG+AGG | - | chr2.3:18273279-18273298 | MS.gene068775:CDS | 55.0% | |
| TCACCCTCAAAGATCCGACG+AGG | + | chr2.3:18273371-18273390 | None:intergenic | 55.0% | |
| TCCTTCTCGTATGGACGACG+GGG | + | chr2.3:18273215-18273234 | None:intergenic | 55.0% | |
| TTCTTTCGCTTCACGCGACC+AGG | + | chr2.3:18274238-18274257 | None:intergenic | 55.0% | |
| ! | ACCACCAAAGGGACTGGTGA+GGG | + | chr2.3:18274209-18274228 | None:intergenic | 55.0% |
| !! | TGGTGGTGATGGAGATGAGG+AGG | - | chr2.3:18274285-18274304 | MS.gene068775:CDS | 55.0% |
| CTCACCAGTCCCTTTGGTGG+TGG | - | chr2.3:18274208-18274227 | MS.gene068775:CDS | 60.0% | |
| GCAGCCAAGAAGGCTTCTGG+TGG | - | chr2.3:18274268-18274287 | MS.gene068775:CDS | 60.0% | |
| GCTGCAGCCAAGAAGGCTTC+TGG | - | chr2.3:18274265-18274284 | MS.gene068775:CDS | 60.0% | |
| TCCCTCACCAGTCCCTTTGG+TGG | - | chr2.3:18274205-18274224 | MS.gene068775:CDS | 60.0% | |
| TGGACGACGGGGCTTCTTGA+AGG | + | chr2.3:18273204-18273223 | None:intergenic | 60.0% | |
| ! | CACCACCAAAGGGACTGGTG+AGG | + | chr2.3:18274210-18274229 | None:intergenic | 60.0% |
| !! | CCCTTTGGTGGTGGTCTTCC+TGG | - | chr2.3:18274217-18274236 | MS.gene068775:CDS | 60.0% |
| GCCCCGTCGTCCATACGAGA+AGG | - | chr2.3:18273211-18273230 | MS.gene068775:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 18273164 | 18274318 | 18273164 | ID=MS.gene068775 |
| chr2.3 | mRNA | 18273164 | 18274318 | 18273164 | ID=MS.gene068775.t1;Parent=MS.gene068775 |
| chr2.3 | exon | 18273909 | 18274318 | 18273909 | ID=MS.gene068775.t1.exon1;Parent=MS.gene068775.t1 |
| chr2.3 | CDS | 18273909 | 18274318 | 18273909 | ID=cds.MS.gene068775.t1;Parent=MS.gene068775.t1 |
| chr2.3 | exon | 18273164 | 18273347 | 18273164 | ID=MS.gene068775.t1.exon2;Parent=MS.gene068775.t1 |
| chr2.3 | CDS | 18273164 | 18273347 | 18273164 | ID=cds.MS.gene068775.t1;Parent=MS.gene068775.t1 |
| Gene Sequence |
| Protein sequence |