Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05867.t1 | XP_003630714.1 | 99.5 | 182 | 1 | 0 | 1 | 182 | 1 | 182 | 6.90E-97 | 363.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05867.t1 | P32899 | 56.1 | 180 | 78 | 1 | 1 | 179 | 2 | 181 | 2.8e-54 | 213.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05867.t1 | B7FMK3 | 99.5 | 182 | 1 | 0 | 1 | 182 | 1 | 182 | 5.0e-97 | 363.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05867.t1 | MTR_8g102530 | 99.451 | 182 | 1 | 0 | 1 | 182 | 1 | 182 | 2.99e-135 | 375 |
| MS.gene05867.t1 | MTR_8g102530 | 95.055 | 182 | 0 | 1 | 1 | 182 | 1 | 173 | 1.70e-125 | 350 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene05867.t1 | AT5G15750 | 80.110 | 181 | 36 | 0 | 1 | 181 | 1 | 181 | 2.02e-110 | 313 |
Find 36 sgRNAs with CRISPR-Local
Find 133 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTGGGTCTGTAATTGTATT+TGG | 0.229997 | 4.4:+3489382 | None:intergenic |
| TGATATGACTGATAAGCTTT+TGG | 0.287922 | 4.4:-3491174 | MS.gene05867:CDS |
| AAGCACCTTTCTCTTTATCT+TGG | 0.381545 | 4.4:+3489309 | None:intergenic |
| ACGTAGGCTCTCAACTGTTT+TGG | 0.388493 | 4.4:-3489476 | MS.gene05867:CDS |
| CTTCCATGTTTCTAGTTACA+AGG | 0.421817 | 4.4:+3489356 | None:intergenic |
| TTTCATGACAGTTACAATAT+GGG | 0.424343 | 4.4:-3490559 | MS.gene05867:intron |
| ATCAACTCGAAAAGGATCCT+TGG | 0.424814 | 4.4:+3491193 | None:intergenic |
| TTTCTAGTTACAAGGTAAGC+TGG | 0.444914 | 4.4:+3489364 | None:intergenic |
| ACATAGTGTGATGCTTTGCC+TGG | 0.454332 | 4.4:+3490525 | None:intergenic |
| ATGCCGGATGGTTCAAAAGT+TGG | 0.484865 | 4.4:-3491240 | MS.gene05867:CDS |
| TCAACTCGAAAAGGATCCTT+GGG | 0.487619 | 4.4:+3491194 | None:intergenic |
| TAACCGTGTCAGCCTTCTGC+AGG | 0.495522 | 4.4:-3490495 | MS.gene05867:intron |
| AATCGTCCCGTCCGGTAACA+TGG | 0.517679 | 4.4:+3491403 | None:intergenic |
| ACATGGAAGACTTGATTACA+TGG | 0.518432 | 4.4:-3489342 | MS.gene05867:CDS |
| ATGCAGCGCTACCATGTTAC+CGG | 0.520504 | 4.4:-3491414 | MS.gene05867:CDS |
| TCAGTCATATCAACTCGAAA+AGG | 0.520506 | 4.4:+3491185 | None:intergenic |
| TTCTAGTTACAAGGTAAGCT+GGG | 0.525625 | 4.4:+3489365 | None:intergenic |
| AGTGTGATGCTTTGCCTGGT+TGG | 0.526362 | 4.4:+3490529 | None:intergenic |
| TTCTTCCAAGATAAAGAGAA+AGG | 0.564085 | 4.4:-3489314 | MS.gene05867:CDS |
| TTGGAATGGAAGAGAGAAGG+GGG | 0.573733 | 4.4:-3491456 | MS.gene05867:CDS |
| GGAAGACTTGATTACATGGG+TGG | 0.589794 | 4.4:-3489338 | MS.gene05867:CDS |
| AGCTAAAGCATCATGAGCAA+AGG | 0.591441 | 4.4:-3491500 | MS.gene05867:CDS |
| GCGCTACCATGTTACCGGAC+GGG | 0.593016 | 4.4:-3491409 | MS.gene05867:CDS |
| TTACCTGCAGAAGGCTGACA+CGG | 0.596614 | 4.4:+3490492 | None:intergenic |
| GAACAAGGACATGTTCGAGT+TGG | 0.597698 | 4.4:-3489406 | MS.gene05867:CDS |
| GGTAAACACTGTGAAACAGA+TGG | 0.604130 | 4.4:-3491219 | MS.gene05867:CDS |
| GCTTCAGTACAATGACAAGT+TGG | 0.608210 | 4.4:-3489290 | MS.gene05867:CDS |
| ATAGGTATTCGAGTATATGC+CGG | 0.611429 | 4.4:-3491256 | MS.gene05867:intron |
| TGTGAAACAGATGGATCCCA+AGG | 0.635519 | 4.4:-3491210 | MS.gene05867:CDS |
| TTTGGAATGGAAGAGAGAAG+GGG | 0.646764 | 4.4:-3491457 | MS.gene05867:CDS |
| TTACCTTGTAACTAGAAACA+TGG | 0.656200 | 4.4:-3489359 | MS.gene05867:CDS |
| AGCGCTACCATGTTACCGGA+CGG | 0.657895 | 4.4:-3491410 | MS.gene05867:CDS |
| ATATGGGTGTGATTCCAACC+AGG | 0.661105 | 4.4:-3490543 | MS.gene05867:CDS |
| GCTGTAACTTATATTGAACA+AGG | 0.683794 | 4.4:-3489421 | MS.gene05867:CDS |
| GTATTCGAGTATATGCCGGA+TGG | 0.685170 | 4.4:-3491252 | MS.gene05867:CDS |
| CATGGAAGACTTGATTACAT+GGG | 0.687449 | 4.4:-3489341 | MS.gene05867:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATATTTGTTTCATAATTA+TGG | - | chr4.4:3489681-3489700 | MS.gene05867:intron | 10.0% |
| !!! | TATTTTTCTTTTTTTTAGTT+TGG | - | chr4.4:3489443-3489462 | MS.gene05867:CDS | 10.0% |
| !! | AAATTTAATGCATGAAAAAT+AGG | - | chr4.4:3490985-3491004 | MS.gene05867:intron | 15.0% |
| !! | TAAGTTATATAACAAAACTA+TGG | + | chr4.4:3490001-3490020 | None:intergenic | 15.0% |
| !! | GTTTATTCAATCACATAAAA+TGG | + | chr4.4:3490964-3490983 | None:intergenic | 20.0% |
| !! | TAAATTATATACAAGTTGCA+GGG | - | chr4.4:3489888-3489907 | MS.gene05867:intron | 20.0% |
| !! | TACTAAATATTTCGATAGAT+AGG | + | chr4.4:3490552-3490571 | None:intergenic | 20.0% |
| !! | TGATTGAATTACTATGTAAA+TGG | - | chr4.4:3490525-3490544 | MS.gene05867:CDS | 20.0% |
| !! | TTACATATTTATGTCATGAA+TGG | + | chr4.4:3489926-3489945 | None:intergenic | 20.0% |
| ! | CTAATGTTAGATGTTTACTT+CGG | - | chr4.4:3490765-3490784 | MS.gene05867:intron | 25.0% |
| ! | GTAAATTATATACAAGTTGC+AGG | - | chr4.4:3489887-3489906 | MS.gene05867:intron | 25.0% |
| ! | TAATGAGCAAACAAATAAAG+TGG | + | chr4.4:3490355-3490374 | None:intergenic | 25.0% |
| ! | TTAGTATGTCAAAAGAAAGA+TGG | + | chr4.4:3489739-3489758 | None:intergenic | 25.0% |
| ! | TTTCAAAATTCAAAGCCATT+TGG | + | chr4.4:3490492-3490511 | None:intergenic | 25.0% |
| ! | TTTCATGACAGTTACAATAT+GGG | - | chr4.4:3490215-3490234 | MS.gene05867:intron | 25.0% |
| !! | AATAGAAGCACAAATAGATT+TGG | + | chr4.4:3489791-3489810 | None:intergenic | 25.0% |
| !! | ATAGAAGCACAAATAGATTT+GGG | + | chr4.4:3489790-3489809 | None:intergenic | 25.0% |
| !! | ATTCATTTTCTTTGTGGAAT+TGG | - | chr4.4:3489476-3489495 | MS.gene05867:CDS | 25.0% |
| !! | TCTTATTTAACTAAGAAGCT+TGG | - | chr4.4:3490462-3490481 | MS.gene05867:intron | 25.0% |
| !! | TTCATTTTCTTTGTGGAATT+GGG | - | chr4.4:3489477-3489496 | MS.gene05867:CDS | 25.0% |
| !! | TTTTATGTTGTTCTTGCATT+TGG | - | chr4.4:3489420-3489439 | MS.gene05867:CDS | 25.0% |
| !! | TTTTCATGACAGTTACAATA+TGG | - | chr4.4:3490214-3490233 | MS.gene05867:intron | 25.0% |
| !!! | AACAATCATCCTTTTTGAAA+TGG | + | chr4.4:3490065-3490084 | None:intergenic | 25.0% |
| !!! | AGTTAATCAAGTTGAAACAT+TGG | - | chr4.4:3491148-3491167 | MS.gene05867:intron | 25.0% |
| !!! | GCTAAGTTATCTAGTTTTAA+GGG | - | chr4.4:3490823-3490842 | MS.gene05867:intron | 25.0% |
| !!! | TGAAGAATTTCATTTTTCAG+TGG | + | chr4.4:3491015-3491034 | None:intergenic | 25.0% |
| !!! | TGCTAAGTTATCTAGTTTTA+AGG | - | chr4.4:3490822-3490841 | MS.gene05867:intron | 25.0% |
| !!! | TTTGAGAAAGGTGAATTTTT+TGG | - | chr4.4:3489299-3489318 | MS.gene05867:CDS | 25.0% |
| AAAACTAACAAGACGAGATT+AGG | + | chr4.4:3491189-3491208 | None:intergenic | 30.0% | |
| AAACTAACAAGACGAGATTA+GGG | + | chr4.4:3491188-3491207 | None:intergenic | 30.0% | |
| AGTGTCTATAGTTATGGATT+TGG | - | chr4.4:3490637-3490656 | MS.gene05867:intron | 30.0% | |
| GCTGTAACTTATATTGAACA+AGG | - | chr4.4:3491353-3491372 | MS.gene05867:intron | 30.0% | |
| GTAAACATCTAACATTAGCA+TGG | + | chr4.4:3490763-3490782 | None:intergenic | 30.0% | |
| GTGGTATATATATTGTAGCA+AGG | - | chr4.4:3490929-3490948 | MS.gene05867:intron | 30.0% | |
| GTGTCTATAGTTATGGATTT+GGG | - | chr4.4:3490638-3490657 | MS.gene05867:intron | 30.0% | |
| TATAACTTACAAGTCTGTCT+AGG | - | chr4.4:3490012-3490031 | MS.gene05867:intron | 30.0% | |
| TGATTTGAACTGAATTGTTG+TGG | - | chr4.4:3489815-3489834 | MS.gene05867:intron | 30.0% | |
| TTACCTTGTAACTAGAAACA+TGG | - | chr4.4:3491415-3491434 | MS.gene05867:CDS | 30.0% | |
| TTACCTTTCTTCTAATGTGA+CGG | - | chr4.4:3491082-3491101 | MS.gene05867:intron | 30.0% | |
| TTCTTCCAAGATAAAGAGAA+AGG | - | chr4.4:3491460-3491479 | MS.gene05867:CDS | 30.0% | |
| ! | ATTGTGGTGGAAATATGAAT+AGG | - | chr4.4:3489500-3489519 | MS.gene05867:intron | 30.0% |
| ! | GAGGTATTAATGAACATTTC+AGG | - | chr4.4:3490662-3490681 | MS.gene05867:intron | 30.0% |
| ! | TAGAAGCACAAATAGATTTG+GGG | + | chr4.4:3489789-3489808 | None:intergenic | 30.0% |
| ! | TGATATGACTGATAAGCTTT+TGG | - | chr4.4:3489600-3489619 | MS.gene05867:intron | 30.0% |
| ! | TTTATCATCGTTTTGTAGCT+AGG | - | chr4.4:3490877-3490896 | MS.gene05867:intron | 30.0% |
| !! | CAAGAAAGTGTCTATAGTTA+TGG | - | chr4.4:3490631-3490650 | MS.gene05867:intron | 30.0% |
| !! | TAGCTGATTCATTTTCTTTG+TGG | - | chr4.4:3489470-3489489 | MS.gene05867:CDS | 30.0% |
| !! | TCAAGTTGAAACATTGGTTA+TGG | - | chr4.4:3491154-3491173 | MS.gene05867:intron | 30.0% |
| !!! | GAAAGGTGAATTTTTTGGAA+TGG | - | chr4.4:3489304-3489323 | MS.gene05867:CDS | 30.0% |
| AACAAAGTTCGGAGCAAATT+AGG | + | chr4.4:3491265-3491284 | None:intergenic | 35.0% | |
| AACGATGATAAACCATATGC+TGG | + | chr4.4:3490869-3490888 | None:intergenic | 35.0% | |
| AACTAACAAGACGAGATTAG+GGG | + | chr4.4:3491187-3491206 | None:intergenic | 35.0% | |
| AAGCACCTTTCTCTTTATCT+TGG | + | chr4.4:3491468-3491487 | None:intergenic | 35.0% | |
| AAGTCAAAGTCTAGGAACAT+TGG | - | chr4.4:3490716-3490735 | MS.gene05867:intron | 35.0% | |
| ACATGGAAGACTTGATTACA+TGG | - | chr4.4:3491432-3491451 | MS.gene05867:CDS | 35.0% | |
| AGAAACAGAAGTCAAAGTCT+AGG | - | chr4.4:3490708-3490727 | MS.gene05867:intron | 35.0% | |
| AGAAGAAGCAAAAAGAAAGC+AGG | + | chr4.4:3490109-3490128 | None:intergenic | 35.0% | |
| AGTCAAAGTCTAGGAACATT+GGG | - | chr4.4:3490717-3490736 | MS.gene05867:intron | 35.0% | |
| ATAGGTATTCGAGTATATGC+CGG | - | chr4.4:3489518-3489537 | MS.gene05867:intron | 35.0% | |
| ATATATTGTAGCAAGGCCAA+GGG | - | chr4.4:3490936-3490955 | MS.gene05867:intron | 35.0% | |
| ATCTAACATTAGCATGGACA+CGG | + | chr4.4:3490757-3490776 | None:intergenic | 35.0% | |
| ATTATATACAAGTTGCAGGG+TGG | - | chr4.4:3489891-3489910 | MS.gene05867:intron | 35.0% | |
| CATGGAAGACTTGATTACAT+GGG | - | chr4.4:3491433-3491452 | MS.gene05867:CDS | 35.0% | |
| TATAGTTATGGATTTGGGTG+AGG | - | chr4.4:3490643-3490662 | MS.gene05867:intron | 35.0% | |
| TATATATTGTAGCAAGGCCA+AGG | - | chr4.4:3490935-3490954 | MS.gene05867:intron | 35.0% | |
| TCAGTCATATCAACTCGAAA+AGG | + | chr4.4:3489592-3489611 | None:intergenic | 35.0% | |
| ! | GCATGATAGTGAACAAAGTT+CGG | + | chr4.4:3491276-3491295 | None:intergenic | 35.0% |
| ! | GCTTTCTTTTTGCTTCTTCT+TGG | - | chr4.4:3490109-3490128 | MS.gene05867:intron | 35.0% |
| ! | GGATACGACACTATGATTTT+TGG | - | chr4.4:3489836-3489855 | MS.gene05867:intron | 35.0% |
| ! | TTACCAACTTTTGAACCATC+CGG | + | chr4.4:3489540-3489559 | None:intergenic | 35.0% |
| ! | TTAGACCTGCCATTTCAAAA+AGG | - | chr4.4:3490053-3490072 | MS.gene05867:intron | 35.0% |
| ! | TTCTAGTTACAAGGTAAGCT+GGG | + | chr4.4:3491412-3491431 | None:intergenic | 35.0% |
| !! | ATACCACTTTTCATACGACT+CGG | + | chr4.4:3490916-3490935 | None:intergenic | 35.0% |
| !! | CTTCCATGTTTCTAGTTACA+AGG | + | chr4.4:3491421-3491440 | None:intergenic | 35.0% |
| !! | TTCTGTTTCTAGACTGTTCA+TGG | + | chr4.4:3490698-3490717 | None:intergenic | 35.0% |
| !! | TTTCTAGTTACAAGGTAAGC+TGG | + | chr4.4:3491413-3491432 | None:intergenic | 35.0% |
| !! | TTTTTAGCCCAAAACTTAGC+TGG | + | chr4.4:3491108-3491127 | None:intergenic | 35.0% |
| !!! | ATCATCCTTTTTGAAATGGC+AGG | + | chr4.4:3490061-3490080 | None:intergenic | 35.0% |
| !!! | CGGTTGTTTTAATACAGTTG+AGG | - | chr4.4:3490785-3490804 | MS.gene05867:intron | 35.0% |
| !!! | GCTAAGTTTTGGGCTAAAAA+TGG | - | chr4.4:3491108-3491127 | MS.gene05867:intron | 35.0% |
| !!! | TTTTGGAATGGAAGAGAGAA+GGG | - | chr4.4:3489316-3489335 | MS.gene05867:CDS | 35.0% |
| !!! | TTTTTGGAATGGAAGAGAGA+AGG | - | chr4.4:3489315-3489334 | MS.gene05867:CDS | 35.0% |
| AATAGTTGAACTGACTGCGA+TGG | - | chr4.4:3489950-3489969 | MS.gene05867:intron | 40.0% | |
| AGACTGTTCATGGACTTTGA+AGG | + | chr4.4:3490688-3490707 | None:intergenic | 40.0% | |
| ATCAACTCGAAAAGGATCCT+TGG | + | chr4.4:3489584-3489603 | None:intergenic | 40.0% | |
| ATCACATAAAATGGCACCCT+TGG | + | chr4.4:3490955-3490974 | None:intergenic | 40.0% | |
| CAAATAGATTTGGGGAGTCA+TGG | + | chr4.4:3489781-3489800 | None:intergenic | 40.0% | |
| CAACTTTACCAACATGTGGT+TGG | - | chr4.4:3490411-3490430 | MS.gene05867:intron | 40.0% | |
| GACGATGTAATGCAAAGTTG+TGG | + | chr4.4:3491243-3491262 | None:intergenic | 40.0% | |
| GCTGGGTCTGTAATTGTATT+TGG | + | chr4.4:3491395-3491414 | None:intergenic | 40.0% | |
| GCTTCAACTTTACCAACATG+TGG | - | chr4.4:3490407-3490426 | MS.gene05867:intron | 40.0% | |
| GCTTCAGTACAATGACAAGT+TGG | - | chr4.4:3491484-3491503 | MS.gene05867:CDS | 40.0% | |
| GGTAAACACTGTGAAACAGA+TGG | - | chr4.4:3489555-3489574 | MS.gene05867:intron | 40.0% | |
| GTATTCAAACAAGTGAAGCC+TGG | - | chr4.4:3490569-3490588 | MS.gene05867:intron | 40.0% | |
| TCAACTCGAAAAGGATCCTT+GGG | + | chr4.4:3489583-3489602 | None:intergenic | 40.0% | |
| TCTTTGTGGAATTGGGATTG+TGG | - | chr4.4:3489484-3489503 | MS.gene05867:intron | 40.0% | |
| ! | AAGAAGCTTGGTCTTCCAAA+TGG | - | chr4.4:3490474-3490493 | MS.gene05867:intron | 40.0% |
| ! | AGCTAAAGCATCATGAGCAA+AGG | - | chr4.4:3489274-3489293 | MS.gene05867:CDS | 40.0% |
| ! | GAAGCCTGGCTAGTTAAATA+AGG | - | chr4.4:3490583-3490602 | MS.gene05867:intron | 40.0% |
| ! | GGGCAAATTTTGTCACATGA+AGG | - | chr4.4:3490843-3490862 | MS.gene05867:intron | 40.0% |
| ! | TTTGGAATGGAAGAGAGAAG+GGG | - | chr4.4:3489317-3489336 | MS.gene05867:CDS | 40.0% |
| !! | CTTGCCTTATTTAACTAGCC+AGG | + | chr4.4:3490590-3490609 | None:intergenic | 40.0% |
| !! | TGAGCAAAGGCTTTTGAGAA+AGG | - | chr4.4:3489287-3489306 | MS.gene05867:CDS | 40.0% |
| AACTGACTGCGATGGTTCTT+CGG | - | chr4.4:3489958-3489977 | MS.gene05867:intron | 45.0% | |
| ACATAGTGTGATGCTTTGCC+TGG | + | chr4.4:3490252-3490271 | None:intergenic | 45.0% | |
| ATATGGGTGTGATTCCAACC+AGG | - | chr4.4:3490231-3490250 | MS.gene05867:intron | 45.0% | |
| ATGCCGGATGGTTCAAAAGT+TGG | - | chr4.4:3489534-3489553 | MS.gene05867:intron | 45.0% | |
| CTTCCGAGTCGTATGAAAAG+TGG | - | chr4.4:3490910-3490929 | MS.gene05867:intron | 45.0% | |
| GAACAAGGACATGTTCGAGT+TGG | - | chr4.4:3491368-3491387 | MS.gene05867:intron | 45.0% | |
| GGAAGACTTGATTACATGGG+TGG | - | chr4.4:3491436-3491455 | MS.gene05867:CDS | 45.0% | |
| GTATTCGAGTATATGCCGGA+TGG | - | chr4.4:3489522-3489541 | MS.gene05867:intron | 45.0% | |
| GTTCACTATCATGCAGACGT+AGG | - | chr4.4:3491282-3491301 | MS.gene05867:intron | 45.0% | |
| TGGCCGTCACATTAGAAGAA+AGG | + | chr4.4:3491088-3491107 | None:intergenic | 45.0% | |
| TGTCTGAGTGCTAAGAAGCT+TGG | - | chr4.4:3490436-3490455 | MS.gene05867:intron | 45.0% | |
| TGTGAAACAGATGGATCCCA+AGG | - | chr4.4:3489564-3489583 | MS.gene05867:intron | 45.0% | |
| TTGGAATGGAAGAGAGAAGG+GGG | - | chr4.4:3489318-3489337 | MS.gene05867:CDS | 45.0% | |
| TTGTGGAATTGGGATTGTGG+TGG | - | chr4.4:3489487-3489506 | MS.gene05867:intron | 45.0% | |
| ! | ACGTAGGCTCTCAACTGTTT+TGG | - | chr4.4:3491298-3491317 | MS.gene05867:intron | 45.0% |
| ! | CTTTTTGTAATCGTCCCGTC+CGG | + | chr4.4:3489382-3489401 | None:intergenic | 45.0% |
| ! | GTGTTCCTTTTACCTGCAGA+AGG | + | chr4.4:3490294-3490313 | None:intergenic | 45.0% |
| AGTGTGATGCTTTGCCTGGT+TGG | + | chr4.4:3490248-3490267 | None:intergenic | 50.0% | |
| ATGCAGCGCTACCATGTTAC+CGG | - | chr4.4:3489360-3489379 | MS.gene05867:CDS | 50.0% | |
| CAGACAGACCAACCACATGT+TGG | + | chr4.4:3490422-3490441 | None:intergenic | 50.0% | |
| GTCACATGAAGGCCAGCATA+TGG | - | chr4.4:3490854-3490873 | MS.gene05867:intron | 50.0% | |
| GTCAGCCTTCTGCAGGTAAA+AGG | - | chr4.4:3490286-3490305 | MS.gene05867:intron | 50.0% | |
| TTACCTGCAGAAGGCTGACA+CGG | + | chr4.4:3490285-3490304 | None:intergenic | 50.0% | |
| ! | GTGACGGCCAGCTAAGTTTT+GGG | - | chr4.4:3491098-3491117 | MS.gene05867:intron | 50.0% |
| ! | TGTGACGGCCAGCTAAGTTT+TGG | - | chr4.4:3491097-3491116 | MS.gene05867:intron | 50.0% |
| AATCGTCCCGTCCGGTAACA+TGG | + | chr4.4:3489374-3489393 | None:intergenic | 55.0% | |
| AGCGCTACCATGTTACCGGA+CGG | - | chr4.4:3489364-3489383 | MS.gene05867:CDS | 55.0% | |
| AGGGGGTCACAGAGAGAACA+TGG | - | chr4.4:3489335-3489354 | MS.gene05867:CDS | 55.0% | |
| TAACCGTGTCAGCCTTCTGC+AGG | - | chr4.4:3490279-3490298 | MS.gene05867:intron | 55.0% | |
| GCGCTACCATGTTACCGGAC+GGG | - | chr4.4:3489365-3489384 | MS.gene05867:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.4 | gene | 3489267 | 3491529 | 3489267 | ID=MS.gene05867 |
| chr4.4 | mRNA | 3489267 | 3491529 | 3489267 | ID=MS.gene05867.t1;Parent=MS.gene05867 |
| chr4.4 | exon | 3491396 | 3491529 | 3491396 | ID=MS.gene05867.t1.exon1;Parent=MS.gene05867.t1 |
| chr4.4 | CDS | 3491396 | 3491529 | 3491396 | ID=cds.MS.gene05867.t1;Parent=MS.gene05867.t1 |
| chr4.4 | exon | 3491167 | 3491274 | 3491167 | ID=MS.gene05867.t1.exon2;Parent=MS.gene05867.t1 |
| chr4.4 | CDS | 3491167 | 3491274 | 3491167 | ID=cds.MS.gene05867.t1;Parent=MS.gene05867.t1 |
| chr4.4 | exon | 3490496 | 3490570 | 3490496 | ID=MS.gene05867.t1.exon3;Parent=MS.gene05867.t1 |
| chr4.4 | CDS | 3490496 | 3490570 | 3490496 | ID=cds.MS.gene05867.t1;Parent=MS.gene05867.t1 |
| chr4.4 | exon | 3489267 | 3489498 | 3489267 | ID=MS.gene05867.t1.exon4;Parent=MS.gene05867.t1 |
| chr4.4 | CDS | 3489267 | 3489498 | 3489267 | ID=cds.MS.gene05867.t1;Parent=MS.gene05867.t1 |
| Gene Sequence |
| Protein sequence |
