AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene069122

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene069122.t1 MTR_5g031860 90.196 306 24 2 12 311 169 474 0.0 553
MS.gene069122.t1 MTR_5g031840 81.579 304 52 2 12 311 163 466 0.0 521
MS.gene069122.t1 MTR_5g031830 81.759 307 49 2 12 311 169 475 0.0 512
MS.gene069122.t1 MTR_7g011470 40.453 309 177 5 4 306 158 465 1.08e-76 242
MS.gene069122.t1 MTR_7g011470 41.077 297 168 5 16 306 166 461 2.61e-75 238
MS.gene069122.t1 MTR_5g464810 43.894 303 157 8 10 303 176 474 6.73e-73 233
MS.gene069122.t1 MTR_5g064240 43.894 303 157 8 10 303 176 474 6.73e-73 233
MS.gene069122.t1 MTR_6g014200 39.394 297 173 5 16 306 181 476 1.60e-72 231
MS.gene069122.t1 MTR_0036s0220 44.291 289 148 8 23 302 189 473 9.30e-71 227
MS.gene069122.t1 MTR_6g014050 37.037 297 180 5 16 306 185 480 2.20e-70 226
MS.gene069122.t1 MTR_6g013900 38.538 301 178 5 10 304 177 476 4.53e-70 225
MS.gene069122.t1 MTR_6g013960 39.344 305 174 6 10 306 178 479 1.41e-69 224
MS.gene069122.t1 MTR_6g014150 38.721 297 175 5 16 306 181 476 2.93e-69 223
MS.gene069122.t1 MTR_5g464760 42.053 302 160 9 16 306 182 479 3.48e-69 223
MS.gene069122.t1 MTR_5g058320 38.926 298 171 6 17 306 170 464 6.15e-69 222
MS.gene069122.t1 MTR_6g013920 40.138 289 164 6 23 304 190 476 8.66e-69 222
MS.gene069122.t1 MTR_6g014310 38.095 294 175 5 16 303 185 477 1.14e-68 221
MS.gene069122.t1 MTR_6g014040 39.394 297 173 5 16 306 185 480 3.18e-68 220
MS.gene069122.t1 MTR_6g013450 38.305 295 165 6 23 306 192 480 5.54e-68 220
MS.gene069122.t1 MTR_0891s0010 38.516 283 165 4 30 303 4 286 9.82e-68 213
MS.gene069122.t1 MTR_6g014187 37.459 307 175 6 11 306 179 479 1.08e-67 219
MS.gene069122.t1 MTR_6g014220 38.832 291 170 5 23 306 188 477 1.21e-67 219
MS.gene069122.t1 MTR_3g479610 36.275 306 185 5 10 306 8 312 1.51e-67 214
MS.gene069122.t1 MTR_6g014190 37.102 283 172 4 30 306 4 286 2.37e-67 213
MS.gene069122.t1 MTR_6g013990 37.294 303 175 6 11 304 179 475 7.04e-67 217
MS.gene069122.t1 MTR_2g008210 39.414 307 175 6 10 306 171 476 7.25e-67 217
MS.gene069122.t1 MTR_3g479520 37.582 306 181 5 10 306 178 482 1.38e-66 216
MS.gene069122.t1 MTR_3g008010 38.062 289 171 5 23 304 188 475 2.02e-66 216
MS.gene069122.t1 MTR_6g014020 37.710 297 178 5 16 306 184 479 2.49e-66 216
MS.gene069122.t1 MTR_6g011340 37.710 297 178 5 16 306 184 479 2.95e-66 215
MS.gene069122.t1 MTR_6g014270 37.037 297 180 5 16 306 183 478 7.70e-66 214
MS.gene069122.t1 MTR_6g013440 36.364 297 182 5 16 306 185 480 7.87e-66 214
MS.gene069122.t1 MTR_3g479470 39.414 307 169 7 10 304 176 477 1.19e-65 214
MS.gene069122.t1 MTR_6g014250 38.144 291 172 5 23 306 188 477 1.33e-65 214
MS.gene069122.t1 MTR_3g069710 38.689 305 170 7 11 308 159 453 1.58e-65 213
MS.gene069122.t1 MTR_6g014290 37.716 289 172 5 23 304 188 475 1.98e-65 213
MS.gene069122.t1 MTR_3g079480 36.513 304 183 5 10 304 184 486 6.03e-65 212
MS.gene069122.t1 MTR_0288s0020 37.162 296 161 5 16 306 185 460 6.28e-65 211
MS.gene069122.t1 MTR_8g059425 36.177 293 180 5 20 306 186 477 8.56e-64 209
MS.gene069122.t1 MTR_4g094220 38.384 297 161 7 23 303 185 475 4.99e-63 207
MS.gene069122.t1 MTR_6g014300 36.364 297 166 6 16 306 186 465 6.80e-63 206
MS.gene069122.t1 MTR_3g479490 34.405 311 193 6 10 310 169 478 4.12e-61 202
MS.gene069122.t1 MTR_6g014240 36.237 287 166 5 23 306 174 446 2.35e-58 194
MS.gene069122.t1 MTR_0477s0010 33.441 311 162 6 7 306 40 316 6.26e-57 186
MS.gene069122.t1 MTR_4g064987 38.851 296 158 9 23 308 163 445 7.97e-56 187
MS.gene069122.t1 MTR_4g064987 38.851 296 158 9 23 308 169 451 1.15e-55 187
MS.gene069122.t1 MTR_3g069690 38.112 286 167 5 30 308 169 451 1.16e-54 184
MS.gene069122.t1 MTR_6g014170 39.167 240 142 3 71 306 222 461 1.48e-54 184
MS.gene069122.t1 MTR_8g007585 41.584 202 116 2 107 306 190 391 6.21e-53 178
MS.gene069122.t1 MTR_8g043470 33.106 293 157 5 16 303 116 374 1.37e-52 177
MS.gene069122.t1 MTR_8g088560 37.124 299 173 9 22 309 166 460 5.99e-51 175
MS.gene069122.t1 MTR_5g035580 35.714 308 178 9 16 310 157 457 1.49e-48 168
MS.gene069122.t1 MTR_7g080950 33.451 284 175 6 30 303 165 444 1.01e-46 163
MS.gene069122.t1 MTR_1g107380 36.789 299 174 8 23 310 182 476 1.96e-46 163
MS.gene069122.t1 MTR_5g035560 36.735 294 167 9 30 310 168 455 1.57e-45 161
MS.gene069122.t1 MTR_4g485630 32.154 311 189 9 19 310 170 477 2.31e-45 160
MS.gene069122.t1 MTR_6g038230 35.616 292 171 9 23 303 166 451 5.56e-45 159
MS.gene069122.t1 MTR_8g083290 33.224 304 178 9 23 304 161 461 1.85e-44 157
MS.gene069122.t1 MTR_6g014160 31.333 300 134 6 11 306 161 392 3.63e-44 155
MS.gene069122.t1 MTR_6g033725 33.775 302 168 10 11 295 163 449 1.72e-43 155
MS.gene069122.t1 MTR_7g080940 34.386 285 170 8 34 308 174 451 1.87e-43 155
MS.gene069122.t1 MTR_6g038240 34.932 292 173 9 23 303 166 451 2.71e-43 154
MS.gene069122.t1 MTR_7g080900 31.142 289 182 7 30 308 173 454 2.86e-43 154
MS.gene069122.t1 MTR_8g006710 33.981 309 172 10 22 308 169 467 6.71e-43 154
MS.gene069122.t1 MTR_6g013680 32.203 295 145 7 16 306 131 374 8.72e-43 151
MS.gene069122.t1 MTR_6g038300 34.589 292 175 8 23 303 166 452 9.23e-43 153
MS.gene069122.t1 MTR_7g013240 34.263 251 145 5 59 305 204 438 1.03e-42 152
MS.gene069122.t1 MTR_6g033625 31.894 301 173 7 23 304 175 462 1.71e-42 152
MS.gene069122.t1 MTR_8g064870 31.438 299 183 9 29 308 180 475 2.32e-42 152
MS.gene069122.t1 MTR_5g070090 32.797 311 185 8 13 310 166 465 2.53e-42 152
MS.gene069122.t1 MTR_8g066610 33.442 308 187 7 20 310 175 481 4.90e-42 152
MS.gene069122.t1 MTR_3g084530 33.951 324 158 10 22 306 166 472 5.33e-42 151
MS.gene069122.t1 MTR_6g014185 34.800 250 130 7 58 304 123 342 7.67e-42 149
MS.gene069122.t1 MTR_7g013220 30.556 324 185 9 1 307 151 451 1.06e-41 150
MS.gene069122.t1 MTR_3g084520 33.876 307 181 6 22 306 166 472 1.38e-41 150
MS.gene069122.t1 MTR_7g013260 34.074 270 152 8 46 305 186 439 1.63e-41 149
MS.gene069122.t1 MTR_8g083280 34.333 300 168 8 23 306 175 461 1.68e-41 150
MS.gene069122.t1 MTR_3g049970 33.591 259 157 5 62 308 216 471 1.94e-41 150
MS.gene069122.t1 MTR_7g080935 33.562 292 180 7 30 311 170 457 2.18e-41 149
MS.gene069122.t1 MTR_6g038200 33.444 302 164 9 23 303 166 451 2.47e-41 149
MS.gene069122.t1 MTR_4g094920 34.538 249 151 5 66 303 229 476 4.14e-41 149
MS.gene069122.t1 MTR_7g013200 32.714 269 156 9 46 305 186 438 4.44e-41 148
MS.gene069122.t1 MTR_1g107315 34.363 259 155 5 62 308 215 470 7.66e-41 148
MS.gene069122.t1 MTR_4g095008 31.677 322 188 10 3 303 151 461 1.41e-40 149
MS.gene069122.t1 MTR_1g107365 32.941 255 153 6 62 307 247 492 1.93e-40 147
MS.gene069122.t1 MTR_1g107360 33.074 257 157 5 58 306 212 461 2.01e-40 147
MS.gene069122.t1 MTR_7g102450 32.975 279 161 7 52 306 195 471 2.37e-40 147
MS.gene069122.t1 MTR_4g031800 31.353 303 174 8 30 308 182 474 2.41e-40 147
MS.gene069122.t1 MTR_1g107350 31.715 309 190 10 2 295 155 457 4.23e-40 146
MS.gene069122.t1 MTR_6g033660 29.703 303 172 8 23 302 175 459 4.93e-40 146
MS.gene069122.t1 MTR_3g084540 31.646 316 185 8 22 310 166 477 5.31e-40 146
MS.gene069122.t1 MTR_6g014186 30.303 297 162 6 16 306 181 438 6.14e-40 145
MS.gene069122.t1 MTR_8g006260 32.686 309 166 9 23 303 172 466 7.42e-40 145
MS.gene069122.t1 MTR_6g488280 31.596 307 171 10 22 303 169 461 1.28e-39 145
MS.gene069122.t1 MTR_0428s0010 31.596 307 171 10 22 303 169 461 1.28e-39 145
MS.gene069122.t1 MTR_1g032490 33.080 263 153 5 61 307 216 471 1.85e-39 144
MS.gene069122.t1 MTR_4g485620 33.746 323 181 11 9 308 144 456 3.48e-39 144
MS.gene069122.t1 MTR_6g038220 33.221 298 170 10 23 303 165 450 3.79e-39 143
MS.gene069122.t1 MTR_7g102560 35.145 276 151 10 61 310 214 487 4.81e-39 144
MS.gene069122.t1 MTR_8g006730 31.908 304 175 10 22 303 170 463 6.75e-39 143
MS.gene069122.t1 MTR_5g016660 29.907 321 199 9 12 308 167 485 7.14e-39 143
MS.gene069122.t1 MTR_5g090670 32.915 319 164 12 23 306 173 476 8.25e-39 143
MS.gene069122.t1 MTR_8g012650 31.894 301 168 10 30 302 176 467 8.28e-39 142
MS.gene069122.t1 MTR_4g108250 34.074 270 152 8 63 308 222 489 9.23e-39 143
MS.gene069122.t1 MTR_5g016480 32.759 290 177 8 20 295 174 459 1.16e-38 142
MS.gene069122.t1 MTR_7g070610 30.892 314 185 11 23 308 179 488 1.46e-38 142
MS.gene069122.t1 MTR_1g062380 34.191 272 156 6 58 306 222 493 1.53e-38 142
MS.gene069122.t1 MTR_1g107375 30.830 253 162 5 62 307 208 454 2.08e-38 141
MS.gene069122.t1 MTR_5g066390 41.250 160 84 4 153 306 59 214 3.11e-38 135
MS.gene069122.t1 MTR_7g070940 30.405 296 174 8 35 308 189 474 3.16e-38 141
MS.gene069122.t1 MTR_4g485640 30.492 305 185 9 23 304 364 664 3.57e-38 143
MS.gene069122.t1 MTR_0536s0020 30.449 312 184 9 23 307 175 480 3.60e-38 141
MS.gene069122.t1 MTR_6g033675 32.759 290 167 9 23 295 174 452 3.78e-38 141
MS.gene069122.t1 MTR_6g023665 30.592 304 178 9 22 303 176 468 4.49e-38 140
MS.gene069122.t1 MTR_7g071040 33.456 272 151 8 63 308 225 492 5.25e-38 141
MS.gene069122.t1 MTR_2086s0010 37.427 171 104 2 139 306 1 171 5.62e-38 133
MS.gene069122.t1 MTR_1996s0010 37.427 171 104 2 139 306 1 171 5.62e-38 133
MS.gene069122.t1 MTR_8g008990 34.351 262 138 8 59 295 205 457 6.19e-38 140
MS.gene069122.t1 MTR_7g070800 34.201 269 149 8 63 308 214 477 6.48e-38 140
MS.gene069122.t1 MTR_8g090095 34.701 268 146 10 60 306 220 479 1.33e-37 139
MS.gene069122.t1 MTR_7g102550 33.091 275 162 5 52 304 209 483 1.44e-37 139
MS.gene069122.t1 MTR_8g009055 34.231 260 139 8 59 295 205 455 1.71e-37 139
MS.gene069122.t1 MTR_6g033615 30.952 294 171 7 30 304 168 448 2.50e-37 138
MS.gene069122.t1 MTR_7g070660 30.990 313 181 11 23 308 177 481 2.74e-37 139
MS.gene069122.t1 MTR_8g009050 33.582 268 146 8 59 303 205 463 2.97e-37 138
MS.gene069122.t1 MTR_5g090700 30.794 315 174 11 23 306 175 476 3.09e-37 139
MS.gene069122.t1 MTR_5g070040 34.000 300 167 11 23 303 176 463 3.60e-37 138
MS.gene069122.t1 MTR_2g046750 30.233 301 183 7 23 304 171 463 3.64e-37 138
MS.gene069122.t1 MTR_7g070860 33.459 266 141 7 63 308 215 464 4.64e-37 138
MS.gene069122.t1 MTR_5g004940 34.783 207 118 3 108 310 188 381 5.43e-37 136
MS.gene069122.t1 MTR_5g072810 30.519 308 187 8 14 308 162 455 5.90e-37 137
MS.gene069122.t1 MTR_2g040530 30.921 304 181 10 23 304 166 462 9.86e-37 137
MS.gene069122.t1 MTR_5g045970 33.574 277 154 8 61 311 225 497 1.00e-36 137
MS.gene069122.t1 MTR_7g102490 32.028 281 161 10 52 306 210 486 1.04e-36 137
MS.gene069122.t1 MTR_4g117960 32.734 278 159 8 57 307 205 481 1.08e-36 137
MS.gene069122.t1 MTR_7g013180 31.837 245 148 5 59 299 211 440 1.21e-36 136
MS.gene069122.t1 MTR_4g117980 31.915 282 165 7 52 307 202 482 1.24e-36 137
MS.gene069122.t1 MTR_6g035295 31.293 294 182 6 35 308 193 486 1.26e-36 137
MS.gene069122.t1 MTR_2g046820 30.693 303 183 7 23 304 164 460 1.33e-36 136
MS.gene069122.t1 MTR_8g077590 31.454 337 185 15 3 310 151 470 1.59e-36 136
MS.gene069122.t1 MTR_5g098930 34.155 284 138 12 58 306 198 467 2.01e-36 136
MS.gene069122.t1 MTR_7g070810 36.239 218 118 5 112 308 260 477 2.17e-36 136
MS.gene069122.t1 MTR_6g005600 32.669 251 130 6 59 283 206 443 2.60e-36 136
MS.gene069122.t1 MTR_8g027885 32.039 309 166 12 22 303 178 469 2.65e-36 136
MS.gene069122.t1 MTR_5g090580 32.014 278 148 8 59 306 208 474 2.76e-36 136
MS.gene069122.t1 MTR_4g117950 31.655 278 160 7 56 307 190 463 2.98e-36 135
MS.gene069122.t1 MTR_0184s0030 31.250 256 133 6 59 283 208 451 4.53e-36 135
MS.gene069122.t1 MTR_1g019510 32.776 299 163 11 30 303 175 460 5.77e-36 135
MS.gene069122.t1 MTR_1g107285 31.250 256 159 4 62 307 216 464 6.42e-36 135
MS.gene069122.t1 MTR_4g118000 31.915 282 162 7 52 307 190 467 9.03e-36 134
MS.gene069122.t1 MTR_8g012635 31.056 322 183 13 3 295 149 460 9.38e-36 134
MS.gene069122.t1 MTR_8g027870 32.830 265 148 8 59 303 215 469 9.55e-36 134
MS.gene069122.t1 MTR_2g035040 30.686 277 165 6 57 307 112 387 9.91e-36 133
MS.gene069122.t1 MTR_8g012730 36.500 200 106 5 118 296 98 297 9.98e-36 131
MS.gene069122.t1 MTR_6g035265 30.892 314 179 10 19 304 168 471 1.03e-35 134
MS.gene069122.t1 MTR_4g008630 34.733 262 145 7 63 306 209 462 1.36e-35 134
MS.gene069122.t1 MTR_7g055710 30.195 308 186 9 23 304 177 481 1.56e-35 134
MS.gene069122.t1 MTR_8g009073 36.986 219 112 9 60 262 77 285 1.66e-35 131
MS.gene069122.t1 MTR_5g040030 30.216 278 173 7 52 308 212 489 1.91e-35 134
MS.gene069122.t1 MTR_8g064880 30.827 266 163 9 29 276 182 444 2.18e-35 134
MS.gene069122.t1 MTR_1g029540 32.836 268 149 7 60 306 202 459 2.75e-35 133
MS.gene069122.t1 MTR_8g012630 37.624 202 104 6 116 295 203 404 3.38e-35 132
MS.gene069122.t1 MTR_5g090600 31.203 266 149 9 59 306 204 453 3.63e-35 132
MS.gene069122.t1 MTR_8g465670 34.201 269 140 10 60 303 211 467 4.06e-35 132
MS.gene069122.t1 MTR_5g072860 29.907 321 171 11 11 306 174 465 4.08e-35 132
MS.gene069122.t1 MTR_7g117405 31.868 273 157 7 57 306 214 480 4.11e-35 133
MS.gene069122.t1 MTR_7g117170 33.333 270 146 10 58 303 213 472 7.85e-35 132
MS.gene069122.t1 MTR_5g090630 30.284 317 175 12 22 306 163 465 7.93e-35 132
MS.gene069122.t1 MTR_8g012745 32.184 261 143 10 59 295 207 457 9.40e-35 132
MS.gene069122.t1 MTR_7g070780 37.619 210 110 7 119 308 277 485 9.91e-35 132
MS.gene069122.t1 MTR_5g090610 32.014 278 150 9 59 307 194 461 1.06e-34 131
MS.gene069122.t1 MTR_8g009073 36.986 219 112 9 60 262 206 414 1.33e-34 131
MS.gene069122.t1 MTR_3g009510 29.508 305 163 9 33 304 189 474 1.44e-34 131
MS.gene069122.t1 MTR_8g009067 36.530 219 113 8 60 262 88 296 1.56e-34 129
MS.gene069122.t1 MTR_4g082820 34.201 269 143 10 58 303 203 460 1.98e-34 130
MS.gene069122.t1 MTR_5g090660 30.915 317 171 13 23 306 171 472 2.24e-34 132
MS.gene069122.t1 MTR_4g024020 29.930 284 163 7 52 304 211 489 2.27e-34 131
MS.gene069122.t1 MTR_0536s0010 32.374 278 158 7 56 307 204 477 2.63e-34 130
MS.gene069122.t1 MTR_7g070740 33.333 270 153 9 63 308 219 485 2.63e-34 130
MS.gene069122.t1 MTR_8g044140 32.927 246 143 7 84 308 206 450 2.93e-34 130
MS.gene069122.t1 MTR_2g034990 31.408 277 163 6 57 307 207 482 3.23e-34 130
MS.gene069122.t1 MTR_7g102460 31.769 277 166 8 52 306 209 484 3.61e-34 130
MS.gene069122.t1 MTR_0184s0040 32.463 268 146 8 60 303 221 477 4.67e-34 130
MS.gene069122.t1 MTR_0078s0190 32.463 268 146 8 60 303 221 477 4.67e-34 130
MS.gene069122.t1 MTR_8g009063 31.410 312 179 12 15 302 169 469 4.69e-34 130
MS.gene069122.t1 MTR_7g102520 33.721 258 140 6 79 309 238 491 5.20e-34 130
MS.gene069122.t1 MTR_5g045960 30.175 285 163 9 52 305 209 488 5.88e-34 130
MS.gene069122.t1 MTR_4g128690 28.254 315 200 10 3 308 157 454 6.42e-34 129
MS.gene069122.t1 MTR_2g059240 30.597 268 168 7 48 306 210 468 6.47e-34 129
MS.gene069122.t1 MTR_8g008970 36.937 222 114 7 85 289 234 446 6.56e-34 131
MS.gene069122.t1 MTR_8g008970 34.783 230 124 9 83 302 571 784 6.70e-28 114
MS.gene069122.t1 MTR_8g009067 40.314 191 91 7 85 262 234 414 7.81e-34 129
MS.gene069122.t1 MTR_5g075440 31.801 261 148 7 58 303 207 452 7.95e-34 129
MS.gene069122.t1 MTR_7g070930 32.463 268 159 8 63 308 222 489 7.98e-34 129
MS.gene069122.t1 MTR_5g090620 30.496 282 151 11 58 306 206 475 8.21e-34 129
MS.gene069122.t1 MTR_7g012120 29.530 298 181 7 37 307 189 484 8.27e-34 129
MS.gene069122.t1 MTR_4g082810 37.850 214 100 9 41 240 201 395 9.40e-34 128
MS.gene069122.t1 MTR_6g013435 30.033 303 162 9 10 306 48 306 1.34e-33 125
MS.gene069122.t1 MTR_5g072830 30.132 302 184 8 20 308 163 450 1.52e-33 128
MS.gene069122.t1 MTR_8g006220 37.209 215 100 8 60 251 210 412 2.95e-33 127
MS.gene069122.t1 MTR_7g047030 32.895 228 125 6 60 267 206 425 3.69e-33 127
MS.gene069122.t1 MTR_7g047270 32.895 228 125 6 60 267 206 425 3.69e-33 127
MS.gene069122.t1 MTR_3g031450 31.293 294 169 8 30 306 174 451 4.36e-33 127
MS.gene069122.t1 MTR_2g035020 30.824 279 166 7 57 309 207 484 5.64e-33 127
MS.gene069122.t1 MTR_1g040310 32.245 245 144 7 84 308 243 485 6.69e-33 127
MS.gene069122.t1 MTR_5g019580 29.483 329 181 12 10 299 155 471 8.58e-33 126
MS.gene069122.t1 MTR_5g067170 31.068 309 176 9 27 307 181 480 1.53e-32 125
MS.gene069122.t1 MTR_8g006270 30.000 270 151 7 60 303 203 460 1.85e-32 125
MS.gene069122.t1 MTR_4g117890 30.389 283 169 7 52 307 194 475 1.93e-32 125
MS.gene069122.t1 MTR_4g128720 28.254 315 200 10 3 308 160 457 2.06e-32 125
MS.gene069122.t1 MTR_6g035185 29.483 329 185 11 13 307 168 483 3.12e-32 125
MS.gene069122.t1 MTR_5g098960 34.804 204 122 5 62 263 212 406 3.31e-32 124
MS.gene069122.t1 MTR_7g070910 32.222 270 157 8 63 308 219 486 4.52e-32 124
MS.gene069122.t1 MTR_7g039550 33.745 243 143 5 84 308 21 263 4.86e-32 120
MS.gene069122.t1 MTR_7g046490 29.755 326 191 12 3 303 148 460 5.50e-32 124
MS.gene069122.t1 MTR_4g485590 32.618 233 153 4 19 248 148 379 5.95e-32 123
MS.gene069122.t1 MTR_5g072820 32.714 269 144 7 58 308 201 450 6.69e-32 123
MS.gene069122.t1 MTR_6g014000 40.299 134 79 1 173 305 21 154 1.01e-31 123
MS.gene069122.t1 MTR_0078s0010 31.579 228 128 6 60 267 206 425 1.33e-31 123
MS.gene069122.t1 MTR_1g019520 34.783 207 116 5 116 303 3 209 2.80e-31 117
MS.gene069122.t1 MTR_5g019580 29.766 299 164 11 35 299 209 495 2.85e-31 122
MS.gene069122.t1 MTR_7g070870 36.816 201 116 5 112 308 267 460 3.33e-31 122
MS.gene069122.t1 MTR_5g039900 28.707 317 203 9 13 308 171 485 3.59e-31 122
MS.gene069122.t1 MTR_0078s0060 30.451 266 154 9 60 303 206 462 3.65e-31 122
MS.gene069122.t1 MTR_5g072840 30.795 302 182 8 20 308 163 450 3.71e-31 121
MS.gene069122.t1 MTR_0009s0240 32.819 259 152 8 61 307 211 459 1.23e-30 120
MS.gene069122.t1 MTR_8g032950 30.824 279 165 7 58 309 206 483 1.78e-30 120
MS.gene069122.t1 MTR_3g031400 30.921 304 184 8 14 306 161 449 2.59e-30 119
MS.gene069122.t1 MTR_7g470610 36.788 193 114 6 63 248 76 267 4.84e-30 115
MS.gene069122.t1 MTR_7g070583 36.788 193 114 6 63 248 76 267 4.84e-30 115
MS.gene069122.t1 MTR_5g072850 30.976 297 169 12 14 303 111 378 8.94e-30 117
MS.gene069122.t1 MTR_5g087620 32.588 313 179 13 23 306 184 493 1.32e-29 117
MS.gene069122.t1 MTR_8g071070 30.651 261 156 8 61 307 220 469 1.71e-29 117
MS.gene069122.t1 MTR_5g029800 28.053 303 180 9 37 307 182 478 6.08e-29 115
MS.gene069122.t1 MTR_8g074550 27.797 295 156 9 58 306 205 488 1.27e-28 115
MS.gene069122.t1 MTR_7g071050 36.082 194 111 5 119 301 233 424 1.79e-28 114
MS.gene069122.t1 MTR_6g078320 27.148 291 184 9 23 294 186 467 2.45e-27 111
MS.gene069122.t1 MTR_7g080960 31.606 193 85 4 116 308 324 469 1.18e-26 109
MS.gene069122.t1 MTR_5g027210 29.044 272 164 8 61 304 212 482 3.84e-26 108
MS.gene069122.t1 MTR_2g098430 29.565 230 138 6 29 242 181 402 4.05e-26 108
MS.gene069122.t1 MTR_8g056740 37.888 161 96 3 116 273 167 326 1.48e-25 105
MS.gene069122.t1 MTR_8g009840 36.316 190 97 7 141 308 340 527 1.83e-25 106
MS.gene069122.t1 MTR_6g013890 27.490 251 122 7 23 268 40 235 6.79e-25 101
MS.gene069122.t1 MTR_7g070760 32.701 211 112 6 44 250 17 201 1.48e-24 99.0
MS.gene069122.t1 MTR_8g068360 39.844 128 73 2 119 242 271 398 2.88e-22 97.1
MS.gene069122.t1 MTR_1g107325 34.641 153 93 1 162 307 201 353 3.05e-22 95.9
MS.gene069122.t1 MTR_3g009490 32.609 184 102 6 143 304 3 186 3.24e-22 92.4
MS.gene069122.t1 MTR_0536s0030 36.076 158 84 4 168 308 196 353 1.38e-21 94.0
MS.gene069122.t1 MTR_7g067330 34.409 186 95 7 115 298 239 399 1.82e-21 94.4
MS.gene069122.t1 MTR_8g068330 38.281 128 75 2 119 242 268 395 2.81e-21 94.0
MS.gene069122.t1 MTR_8g466240 31.383 188 117 5 61 240 202 385 4.34e-21 93.6
MS.gene069122.t1 MTR_7g067120 33.714 175 105 6 115 284 239 407 4.96e-21 93.2
MS.gene069122.t1 MTR_8g068340 37.333 150 88 4 119 263 272 420 8.43e-21 92.8
MS.gene069122.t1 MTR_7g070995 36.054 147 66 5 184 308 6 146 8.58e-21 87.4
MS.gene069122.t1 MTR_5g090690 34.161 161 82 5 73 218 154 305 4.83e-20 89.7
MS.gene069122.t1 MTR_5g066410 37.405 131 78 3 114 240 241 371 4.95e-20 90.5
MS.gene069122.t1 MTR_8g007565 35.115 131 81 3 114 240 265 395 9.34e-20 89.7
MS.gene069122.t1 MTR_8g007650 35.115 131 81 3 114 240 265 395 2.05e-19 88.6
MS.gene069122.t1 MTR_3g435310 35.714 126 79 2 118 242 227 351 6.07e-18 84.0
MS.gene069122.t1 MTR_8g006230 33.929 168 94 7 14 176 104 259 1.59e-17 81.3
MS.gene069122.t1 MTR_4g123553 28.421 190 121 6 59 242 212 392 3.03e-17 82.4
MS.gene069122.t1 MTR_2g008226 30.682 176 107 6 118 283 277 447 3.64e-17 82.0
MS.gene069122.t1 MTR_6g042310 28.977 176 116 5 118 286 271 444 2.57e-16 79.3
MS.gene069122.t1 MTR_6g036650 34.400 125 80 2 119 242 279 402 8.60e-16 77.8
MS.gene069122.t1 MTR_2g008220 35.200 125 79 2 119 242 273 396 1.07e-15 77.8
MS.gene069122.t1 MTR_2g046620 33.333 126 82 2 118 242 269 393 1.16e-15 77.4
MS.gene069122.t1 MTR_2g008225 35.200 125 79 2 119 242 274 397 1.29e-15 77.4
MS.gene069122.t1 MTR_4g059370 29.710 138 91 3 119 250 190 327 4.04e-15 75.5
MS.gene069122.t1 MTR_4g077960 32.540 126 83 2 118 242 245 369 1.05e-14 74.7
MS.gene069122.t1 MTR_2g014900 29.091 165 107 4 117 272 256 419 1.21e-14 74.3
MS.gene069122.t1 MTR_4g079270 24.907 269 181 8 15 273 162 419 1.90e-14 73.9
MS.gene069122.t1 MTR_4g079250 25.926 243 157 7 42 272 190 421 2.41e-14 73.6
MS.gene069122.t1 MTR_1g090270 28.986 138 92 3 119 250 263 400 2.50e-14 73.6
MS.gene069122.t1 MTR_0475s0030 44.444 63 35 0 202 264 13 75 1.73e-13 65.9
MS.gene069122.t1 MTR_6g015160 49.020 51 25 1 202 251 30 80 1.71e-11 60.1
MS.gene069122.t1 MTR_8g028755 33.898 118 60 5 111 227 94 194 2.14e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene069122.t1 AT1G22400 37.838 296 174 6 17 303 184 478 1.30e-65 214
MS.gene069122.t1 AT1G22380 37.748 302 178 6 14 306 180 480 3.07e-65 213
MS.gene069122.t1 AT3G11340 39.298 285 160 5 30 308 169 446 2.23e-64 209
MS.gene069122.t1 AT1G22360 37.338 308 179 7 10 306 173 477 1.04e-63 209
MS.gene069122.t1 AT1G22370 38.667 300 174 6 16 306 7 305 4.92e-63 202
MS.gene069122.t1 AT5G05900 41.696 283 146 7 30 306 178 447 4.96e-63 206
MS.gene069122.t1 AT1G22370 38.889 306 176 7 11 306 171 475 6.12e-61 201
MS.gene069122.t1 AT1G22360 37.013 308 168 8 10 306 173 465 1.44e-60 200
MS.gene069122.t1 AT1G78270 37.954 303 171 8 23 309 188 489 2.69e-60 200
MS.gene069122.t1 AT1G22340 35.831 307 186 6 10 306 176 481 4.24e-60 199
MS.gene069122.t1 AT5G59590 38.762 307 165 9 5 303 155 446 2.90e-59 196
MS.gene069122.t1 AT5G05890 36.513 304 176 6 11 308 162 454 1.19e-58 195
MS.gene069122.t1 AT3G46670 39.373 287 155 7 30 308 175 450 2.79e-58 194
MS.gene069122.t1 AT5G05880 37.500 304 173 6 11 308 158 450 5.33e-58 193
MS.gene069122.t1 AT5G59580 37.966 295 163 8 21 307 166 448 9.06e-57 190
MS.gene069122.t1 AT3G46660 39.236 288 155 7 30 308 181 457 1.02e-56 190
MS.gene069122.t1 AT3G46680 37.716 289 157 8 26 303 170 446 1.01e-55 187
MS.gene069122.t1 AT5G05860 40.767 287 149 7 30 306 172 447 1.73e-55 186
MS.gene069122.t1 AT5G38010 38.028 284 159 7 30 306 180 453 2.10e-55 186
MS.gene069122.t1 AT3G46700 37.544 285 164 5 30 308 170 446 5.43e-55 185
MS.gene069122.t1 AT5G05870 34.868 304 180 7 11 306 161 454 2.49e-53 181
MS.gene069122.t1 AT5G38040 35.644 303 167 10 14 304 161 447 5.45e-53 180
MS.gene069122.t1 AT3G55710 36.213 301 175 8 16 308 165 456 3.39e-52 178
MS.gene069122.t1 AT3G46720 39.565 230 125 5 80 308 226 442 2.73e-51 175
MS.gene069122.t1 AT3G46690 34.810 316 184 8 1 308 150 451 3.43e-51 175
MS.gene069122.t1 AT4G15480 36.434 258 149 4 58 304 223 476 8.36e-51 175
MS.gene069122.t1 AT3G46650 34.936 312 179 8 4 306 136 432 1.43e-50 173
MS.gene069122.t1 AT3G55700 35.294 306 175 8 11 308 162 452 1.04e-49 171
MS.gene069122.t1 AT2G26480 34.965 286 168 7 30 306 169 445 9.69e-49 169
MS.gene069122.t1 AT5G17040 32.166 314 190 11 3 306 37 337 2.72e-48 165
MS.gene069122.t1 AT5G17050 33.544 316 183 11 3 306 156 456 1.19e-46 163
MS.gene069122.t1 AT5G17040 32.877 292 175 10 23 306 161 439 2.98e-46 162
MS.gene069122.t1 AT4G15490 33.851 322 181 10 3 304 155 464 3.30e-46 162
MS.gene069122.t1 AT5G17030 33.871 310 181 10 6 306 161 455 3.81e-46 162
MS.gene069122.t1 AT1G30530 34.505 313 182 11 3 306 152 450 8.19e-46 161
MS.gene069122.t1 AT1G05675 38.112 286 162 8 29 303 168 449 1.37e-45 160
MS.gene069122.t1 AT2G36970 33.113 302 180 8 19 308 181 472 1.91e-44 158
MS.gene069122.t1 AT3G21560 34.084 311 172 10 13 304 174 470 2.99e-44 157
MS.gene069122.t1 AT2G43840 31.949 313 191 9 8 307 144 447 8.14e-44 155
MS.gene069122.t1 AT1G05680 36.395 294 156 8 29 303 168 449 8.47e-44 155
MS.gene069122.t1 AT4G15500 33.230 322 182 8 3 304 152 460 8.96e-44 156
MS.gene069122.t1 AT2G29710 30.537 298 190 5 22 309 175 465 8.96e-44 156
MS.gene069122.t1 AT2G28080 33.088 272 167 8 10 273 176 440 1.67e-43 155
MS.gene069122.t1 AT2G43840 32.278 316 186 11 8 307 144 447 2.84e-43 154
MS.gene069122.t1 AT2G15490 37.452 259 144 8 61 304 220 475 6.51e-43 154
MS.gene069122.t1 AT5G26310 33.434 332 171 13 3 299 144 460 1.31e-42 153
MS.gene069122.t1 AT3G16520 33.221 298 172 10 22 304 172 457 1.53e-42 152
MS.gene069122.t1 AT2G15490 37.023 262 144 8 61 304 220 478 1.84e-42 152
MS.gene069122.t1 AT2G43820 32.278 316 188 10 8 308 144 448 1.84e-42 152
MS.gene069122.t1 AT2G31750 34.247 292 171 9 30 306 169 454 2.06e-42 152
MS.gene069122.t1 AT3G16520 36.100 241 135 7 22 252 172 403 2.86e-42 151
MS.gene069122.t1 AT3G16520 36.100 241 135 7 22 252 172 403 3.10e-42 151
MS.gene069122.t1 AT2G31750 34.247 292 171 9 30 306 169 454 4.56e-42 152
MS.gene069122.t1 AT4G15550 30.368 326 178 9 10 304 164 471 1.89e-41 150
MS.gene069122.t1 AT4G34138 37.349 249 138 7 61 295 223 467 2.18e-41 150
MS.gene069122.t1 AT4G34131 33.948 271 162 8 52 308 214 481 3.46e-41 149
MS.gene069122.t1 AT2G36760 34.058 276 154 7 61 310 223 496 4.32e-41 149
MS.gene069122.t1 AT2G31790 32.792 308 182 11 13 303 154 453 4.39e-41 148
MS.gene069122.t1 AT2G15480 33.555 301 180 9 19 304 183 478 4.49e-41 149
MS.gene069122.t1 AT2G29730 29.373 303 190 7 22 311 176 467 1.67e-40 147
MS.gene069122.t1 AT2G15480 32.476 311 180 9 19 304 183 488 2.21e-40 147
MS.gene069122.t1 AT3G53160 32.500 280 149 8 61 310 217 486 2.68e-39 144
MS.gene069122.t1 AT3G02100 35.573 253 138 7 62 308 228 461 3.16e-39 144
MS.gene069122.t1 AT4G34135 35.688 269 157 6 54 308 217 483 3.85e-39 144
MS.gene069122.t1 AT5G66690 32.362 309 164 9 23 299 165 460 3.94e-39 144
MS.gene069122.t1 AT1G05560 32.237 304 164 9 30 306 163 451 5.30e-39 143
MS.gene069122.t1 AT4G01070 34.902 255 136 8 53 286 201 446 5.67e-39 143
MS.gene069122.t1 AT1G05560 32.237 304 164 9 30 306 213 501 7.84e-39 143
MS.gene069122.t1 AT2G36780 32.463 268 157 7 61 306 223 488 1.31e-38 142
MS.gene069122.t1 AT4G14090 32.759 290 170 8 29 304 175 453 1.94e-38 141
MS.gene069122.t1 AT2G23250 33.333 312 177 12 14 309 142 438 2.74e-38 140
MS.gene069122.t1 AT1G01420 35.317 252 134 7 58 289 206 448 3.02e-38 141
MS.gene069122.t1 AT1G01420 35.317 252 134 7 58 289 209 451 3.12e-38 141
MS.gene069122.t1 AT3G50740 31.928 332 172 13 13 304 154 471 4.55e-38 141
MS.gene069122.t1 AT1G05530 31.090 312 172 10 22 306 159 454 4.76e-38 140
MS.gene069122.t1 AT2G23260 32.013 303 178 12 14 299 155 446 7.82e-38 140
MS.gene069122.t1 AT2G36750 32.714 269 155 8 61 306 218 483 8.32e-38 140
MS.gene069122.t1 AT2G30140 31.392 309 183 10 14 310 163 454 1.61e-37 139
MS.gene069122.t1 AT2G30140 31.373 306 181 10 17 310 167 455 2.69e-37 138
MS.gene069122.t1 AT2G36770 32.364 275 156 9 61 308 223 494 2.89e-37 139
MS.gene069122.t1 AT1G01390 37.745 204 107 5 53 242 201 398 1.32e-35 134
MS.gene069122.t1 AT2G36800 31.579 285 166 9 45 306 209 487 1.47e-35 134
MS.gene069122.t1 AT1G01390 37.745 204 107 5 53 242 218 415 1.92e-35 134
MS.gene069122.t1 AT1G07250 30.820 305 169 11 12 295 178 461 1.83e-34 131
MS.gene069122.t1 AT1G07240 31.023 303 175 11 12 295 177 464 5.42e-34 130
MS.gene069122.t1 AT3G21790 32.404 287 153 11 50 306 203 478 1.05e-33 129
MS.gene069122.t1 AT1G24100 33.824 272 159 9 50 306 193 458 1.43e-33 128
MS.gene069122.t1 AT2G36790 31.769 277 159 10 61 310 222 495 3.80e-33 127
MS.gene069122.t1 AT4G36770 30.970 268 142 9 52 290 194 447 8.52e-33 126
MS.gene069122.t1 AT4G15260 30.882 272 153 8 58 304 91 352 8.76e-33 124
MS.gene069122.t1 AT1G07260 33.921 227 128 6 83 296 244 461 2.97e-32 125
MS.gene069122.t1 AT3G21760 36.816 201 102 5 53 237 209 400 3.76e-32 125
MS.gene069122.t1 AT3G22250 34.536 194 119 5 81 271 240 428 4.45e-32 124
MS.gene069122.t1 AT3G21800 37.073 205 107 6 60 251 211 406 1.15e-31 123
MS.gene069122.t1 AT2G29750 29.167 288 179 7 23 296 187 463 1.53e-31 123
MS.gene069122.t1 AT5G14860 36.154 260 142 11 58 304 225 473 2.92e-31 122
MS.gene069122.t1 AT4G15280 28.676 272 160 6 58 304 209 471 4.54e-31 122
MS.gene069122.t1 AT5G37950 34.234 222 129 7 10 225 127 337 5.36e-31 119
MS.gene069122.t1 AT4G15280 28.676 272 160 6 58 304 241 503 6.47e-31 121
MS.gene069122.t1 AT2G29740 28.475 295 175 9 22 296 186 464 8.10e-31 121
MS.gene069122.t1 AT5G37950 35.149 202 115 6 30 225 152 343 2.81e-30 117
MS.gene069122.t1 AT3G21780 30.830 253 148 8 13 251 163 402 7.33e-30 118
MS.gene069122.t1 AT2G18570 31.227 269 141 11 60 299 206 459 7.65e-30 118
MS.gene069122.t1 AT3G53150 35.859 198 114 7 61 248 231 425 2.17e-29 117
MS.gene069122.t1 AT1G73880 27.097 310 205 10 13 308 166 468 3.79e-29 116
MS.gene069122.t1 AT5G03490 32.000 250 149 6 63 304 224 460 8.52e-29 115
MS.gene069122.t1 AT2G30150 27.869 305 192 9 13 306 149 436 9.11e-29 115
MS.gene069122.t1 AT1G10400 32.841 271 153 11 45 303 206 459 1.15e-28 115
MS.gene069122.t1 AT2G30150 27.869 305 192 9 13 306 165 452 1.38e-28 114
MS.gene069122.t1 AT2G18560 30.855 269 142 12 60 299 116 369 3.15e-28 112
MS.gene069122.t1 AT3G21750 31.513 238 135 5 61 280 204 431 1.41e-27 112
MS.gene069122.t1 AT1G51210 32.895 228 132 7 63 282 219 433 8.63e-27 109
MS.gene069122.t1 AT5G12890 36.842 190 99 8 60 237 224 404 7.69e-26 107
MS.gene069122.t1 AT2G16890 28.682 258 161 8 54 299 214 460 9.37e-26 107
MS.gene069122.t1 AT1G06000 28.625 269 169 7 52 303 168 430 1.22e-25 106
MS.gene069122.t1 AT2G16890 31.818 198 121 5 54 248 214 400 1.60e-24 102
MS.gene069122.t1 AT5G49690 34.682 173 97 5 119 283 267 431 1.43e-21 94.7
MS.gene069122.t1 AT5G65550 37.594 133 80 3 119 250 270 400 9.37e-20 89.7
MS.gene069122.t1 AT2G22590 37.500 128 76 2 119 242 274 401 2.73e-16 79.3
MS.gene069122.t1 AT4G01070 35.965 114 61 3 53 163 201 305 6.18e-14 72.0
MS.gene069122.t1 AT5G53990 28.415 183 120 4 119 292 244 424 1.85e-13 70.9
MS.gene069122.t1 AT1G64910 27.941 136 95 3 119 251 244 379 2.08e-12 67.8
MS.gene069122.t1 AT4G27570 23.651 241 154 7 24 250 160 384 3.74e-12 67.0
MS.gene069122.t1 AT5G54010 28.986 138 91 4 119 251 250 385 1.32e-11 65.5
MS.gene069122.t1 AT4G34135 34.821 112 69 3 54 163 217 326 1.49e-11 64.7
MS.gene069122.t1 AT4G27560 26.897 145 99 3 111 250 242 384 2.36e-11 64.7
MS.gene069122.t1 AT4G09500 28.090 178 113 7 126 292 226 399 2.75e-11 64.3
MS.gene069122.t1 AT4G09500 28.090 178 113 7 126 292 251 424 2.95e-11 64.3

Find 78 sgRNAs with CRISPR-Local

Find 92 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTCCAAGTTTCTGTAAAA+TGG 0.190412 5.4:+21761002 MS.gene069122:CDS
CTGACCCAACAATCACTTAA+AGG 0.194273 5.4:+21761054 MS.gene069122:CDS
TGGGGACTTGAAGACGAATT+TGG 0.196816 5.4:-21761128 None:intergenic
ATGATTTCTTCTCTCTTCAT+TGG 0.227915 5.4:-21761312 None:intergenic
AGTGTTCTGGTTAAATTTAT+AGG 0.252054 5.4:+21760913 MS.gene069122:CDS
ATTTGTTGATCAGCAAAATA+AGG 0.280250 5.4:-21761582 None:intergenic
GTGAGTGAGGTTTGGAGAAT+TGG 0.287683 5.4:+21761618 MS.gene069122:CDS
TGATTTCTTCTCTCTTCATT+GGG 0.288337 5.4:-21761311 None:intergenic
AAATACAACCTTGTCTAATA+TGG 0.296217 5.4:-21761031 None:intergenic
AAGATTTGGTTGAGTATATA+AGG 0.297268 5.4:+21761799 MS.gene069122:CDS
CTACAACAACTTCCAAGATT+TGG 0.297458 5.4:+21761785 MS.gene069122:CDS
CCAAACATGGTTCAAGAAAA+AGG 0.304790 5.4:+21761390 MS.gene069122:CDS
TGTAAAATCAGCCATGGATA+TGG 0.329000 5.4:+21761722 MS.gene069122:CDS
GGGCCAATGGTGTAGAGTTT+GGG 0.329587 5.4:-21761147 None:intergenic
AGGGCCAATGGTGTAGAGTT+TGG 0.331795 5.4:-21761148 None:intergenic
GAGAAGAAATCATTGAGATT+TGG 0.337296 5.4:+21761322 MS.gene069122:CDS
GGGGACTTGAAGACGAATTT+GGG 0.347598 5.4:-21761127 None:intergenic
CTGATCAACAAATTAATAGT+AGG 0.360356 5.4:+21761592 MS.gene069122:CDS
TGAGTGAGGTTTGGAGAATT+GGG 0.369652 5.4:+21761619 MS.gene069122:CDS
AATGAGTTATACTAGTGTTC+TGG 0.370515 5.4:+21760900 None:intergenic
GTGTGACAAAACTTCCTCTT+GGG 0.379240 5.4:-21761475 None:intergenic
GTAGGTTTGTGAGTGAGGTT+TGG 0.393510 5.4:+21761610 MS.gene069122:CDS
CAAATCTTGGAAGTTGTTGT+AGG 0.402443 5.4:-21761784 None:intergenic
TAGGAATGTTGTTGAGAATA+TGG 0.403651 5.4:+21761665 MS.gene069122:CDS
CACTTCGAAGAAATTGCTCT+TGG 0.410544 5.4:-21761214 None:intergenic
TTATATACTCAACCAAATCT+TGG 0.416061 5.4:-21761797 None:intergenic
CGTTGCCTTTAAGTGATTGT+TGG 0.430560 5.4:-21761059 None:intergenic
TGTGTGACAAAACTTCCTCT+TGG 0.436898 5.4:-21761476 None:intergenic
ACCACCAGGACTCACACTCT+TGG 0.441655 5.4:-21761757 None:intergenic
AGACGAATTTGGGAGAGTAC+TGG 0.442326 5.4:-21761117 None:intergenic
GAGAATTGGGTTGGATATGA+AGG 0.449432 5.4:+21761632 MS.gene069122:CDS
GACGAATTTGGGAGAGTACT+GGG 0.450146 5.4:-21761116 None:intergenic
ACTTTGGAGAGTGTGATTTG+TGG 0.454735 5.4:+21761540 MS.gene069122:CDS
AAATAAGGCCAACATATCAT+AGG 0.459700 5.4:-21761567 None:intergenic
TGAATGATGTTATGGTGAAT+AGG 0.471178 5.4:+21761688 MS.gene069122:CDS
TAATAGTAGGTTTGTGAGTG+AGG 0.474155 5.4:+21761605 MS.gene069122:CDS
GAATATGGTGAATGATGTTA+TGG 0.476831 5.4:+21761680 MS.gene069122:CDS
ACATATAAAACTGACTTCAA+TGG 0.477177 5.4:-21761270 None:intergenic
GAAAGGAATGATTGTGGGGT+GGG 0.487132 5.4:+21761449 MS.gene069122:CDS
AGCCATGGATATGGCTAAGT+TGG 0.496465 5.4:+21761731 MS.gene069122:CDS
AAAGAGAAAGGAATGATTGT+GGG 0.503138 5.4:+21761444 MS.gene069122:CDS
CAAGAGCAATTTCTTCGAAG+TGG 0.508844 5.4:+21761215 MS.gene069122:CDS
GTTGCCTTTAAGTGATTGTT+GGG 0.509980 5.4:-21761058 None:intergenic
TGAGGTTTGGAGAATTGGGT+TGG 0.516327 5.4:+21761623 MS.gene069122:CDS
ATATGAAGGATGTTTGTGAT+AGG 0.519622 5.4:+21761646 MS.gene069122:CDS
CATAAGAAACGTGCCAGGCA+TGG 0.531082 5.4:+21760957 MS.gene069122:CDS
GTCCCCAAACTCTACACCAT+TGG 0.531566 5.4:+21761144 MS.gene069122:CDS
GATTTCTTCTCTCTTCATTG+GGG 0.540894 5.4:-21761310 None:intergenic
TAGTGGGTGGAACTCTACTT+TGG 0.543912 5.4:+21761524 MS.gene069122:CDS
GAAGGGACTACAAAAGAGAA+AGG 0.545265 5.4:+21761432 MS.gene069122:CDS
GCATCCAAGAGTGTGAGTCC+TGG 0.552305 5.4:+21761753 MS.gene069122:CDS
GTGGAGTGCCTATGATATGT+TGG 0.555355 5.4:+21761559 MS.gene069122:CDS
CTATTGAAGGAGCTTGAGGA+AGG 0.558458 5.4:+21761414 MS.gene069122:CDS
GGTTAAATTTATAGGAGATG+AGG 0.559641 5.4:+21760921 MS.gene069122:CDS
AAAAGAGAAAGGAATGATTG+TGG 0.560272 5.4:+21761443 MS.gene069122:CDS
CGCATCATAAGAAACGTGCC+AGG 0.561151 5.4:+21760952 MS.gene069122:CDS
GTGGGTGATTAGGCCAAACA+TGG 0.567713 5.4:+21761377 MS.gene069122:CDS
GTGGTGGTGAAGAGGGCCAA+TGG 0.570422 5.4:-21761160 None:intergenic
AGGACTATTGAAGGAGCTTG+AGG 0.572112 5.4:+21761410 MS.gene069122:CDS
AGAAAGGAATGATTGTGGGG+TGG 0.582068 5.4:+21761448 MS.gene069122:CDS
TCCAAGAGTGTGAGTCCTGG+TGG 0.586272 5.4:+21761756 MS.gene069122:CDS
CGAAGTGGATAGAACTTGCA+TGG 0.587606 5.4:+21761230 MS.gene069122:CDS
GGAATTTGTAAAATCAGCCA+TGG 0.587876 5.4:+21761716 MS.gene069122:CDS
TATTGAGGTGGTGGTGAAGA+GGG 0.591385 5.4:-21761167 None:intergenic
GTATTGAGGTGGTGGTGAAG+AGG 0.603611 5.4:-21761168 None:intergenic
TGCCAACTTAGCCATATCCA+TGG 0.606456 5.4:-21761733 None:intergenic
TGTGACAAAACTTCCTCTTG+GGG 0.606724 5.4:-21761474 None:intergenic
GAAATCATTGAGATTTGGCA+CGG 0.614016 5.4:+21761327 MS.gene069122:CDS
TATTGAAGGAGCTTGAGGAA+GGG 0.618899 5.4:+21761415 MS.gene069122:CDS
GGCCAATGGTGTAGAGTTTG+GGG 0.619371 5.4:-21761146 None:intergenic
ACGAATTTGGGAGAGTACTG+GGG 0.634682 5.4:-21761115 None:intergenic
ATTTATAGGAGATGAGGACA+TGG 0.638183 5.4:+21760927 MS.gene069122:CDS
TGTGGGGTGGGTTCCCCAAG+AGG 0.646579 5.4:+21761461 MS.gene069122:CDS
TGTTATGGTGAATAGGAATG+AGG 0.655361 5.4:+21761695 MS.gene069122:CDS
AAGAGAAAGGAATGATTGTG+GGG 0.662428 5.4:+21761445 MS.gene069122:CDS
TGGATAGAACTTGCATGGTG+TGG 0.668370 5.4:+21761235 MS.gene069122:CDS
TTGTTGTAGGAAGAACCACC+AGG 0.680627 5.4:-21761771 None:intergenic
GGAAGATACCATATTAGACA+AGG 0.691986 5.4:+21761023 MS.gene069122:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATGATTTTTTTGTTGTATTG+AGG - chr5.4:21761185-21761204 None:intergenic 20.0%
! AAATACAACCTTGTCTAATA+TGG - chr5.4:21761034-21761053 None:intergenic 25.0%
! CTGATCAACAAATTAATAGT+AGG + chr5.4:21761592-21761611 MS.gene069122:CDS 25.0%
! TTATATACTCAACCAAATCT+TGG - chr5.4:21761800-21761819 None:intergenic 25.0%
!! AAGATTTGGTTGAGTATATA+AGG + chr5.4:21761799-21761818 MS.gene069122:CDS 25.0%
!! ACATATAAAACTGACTTCAA+TGG - chr5.4:21761273-21761292 None:intergenic 25.0%
!! AGTGTTCTGGTTAAATTTAT+AGG + chr5.4:21760913-21760932 MS.gene069122:CDS 25.0%
!! ATAGCAAAAAACGATTTTTG+TGG + chr5.4:21761358-21761377 MS.gene069122:CDS 25.0%
!! ATTTGTTGATCAGCAAAATA+AGG - chr5.4:21761585-21761604 None:intergenic 25.0%
!! TAGCAAAAAACGATTTTTGT+GGG + chr5.4:21761359-21761378 MS.gene069122:CDS 25.0%
!!! ATTTTTTTGTTGTATTGAGG+TGG - chr5.4:21761182-21761201 None:intergenic 25.0%
!!! TCAGTTTTATATGTTAGCTT+TGG + chr5.4:21761279-21761298 MS.gene069122:CDS 25.0%
AAAAGAGAAAGGAATGATTG+TGG + chr5.4:21761443-21761462 MS.gene069122:CDS 30.0%
AAAGAGAAAGGAATGATTGT+GGG + chr5.4:21761444-21761463 MS.gene069122:CDS 30.0%
AAATAAGGCCAACATATCAT+AGG - chr5.4:21761570-21761589 None:intergenic 30.0%
ATATGAAGGATGTTTGTGAT+AGG + chr5.4:21761646-21761665 MS.gene069122:CDS 30.0%
ATGATTTCTTCTCTCTTCAT+TGG - chr5.4:21761315-21761334 None:intergenic 30.0%
GAATATGGTGAATGATGTTA+TGG + chr5.4:21761680-21761699 MS.gene069122:CDS 30.0%
GAGAAGAAATCATTGAGATT+TGG + chr5.4:21761322-21761341 MS.gene069122:CDS 30.0%
GGTTAAATTTATAGGAGATG+AGG + chr5.4:21760921-21760940 MS.gene069122:CDS 30.0%
TAGGAATGTTGTTGAGAATA+TGG + chr5.4:21761665-21761684 MS.gene069122:CDS 30.0%
TCAAGAAAAAGGACTATTGA+AGG + chr5.4:21761401-21761420 MS.gene069122:CDS 30.0%
TCTTCCAAGTTTCTGTAAAA+TGG + chr5.4:21761002-21761021 MS.gene069122:CDS 30.0%
TGAATGATGTTATGGTGAAT+AGG + chr5.4:21761688-21761707 MS.gene069122:CDS 30.0%
TGATTTCTTCTCTCTTCATT+GGG - chr5.4:21761314-21761333 None:intergenic 30.0%
! TCTTCCATTTTACAGAAACT+TGG - chr5.4:21761009-21761028 None:intergenic 30.0%
AAGAGAAAGGAATGATTGTG+GGG + chr5.4:21761445-21761464 MS.gene069122:CDS 35.0%
ATTTATAGGAGATGAGGACA+TGG + chr5.4:21760927-21760946 MS.gene069122:CDS 35.0%
CAAATCTTGGAAGTTGTTGT+AGG - chr5.4:21761787-21761806 None:intergenic 35.0%
CCAAACATGGTTCAAGAAAA+AGG + chr5.4:21761390-21761409 MS.gene069122:CDS 35.0%
CTACAACAACTTCCAAGATT+TGG + chr5.4:21761785-21761804 MS.gene069122:CDS 35.0%
GAAATCATTGAGATTTGGCA+CGG + chr5.4:21761327-21761346 MS.gene069122:CDS 35.0%
GATTTCTTCTCTCTTCATTG+GGG - chr5.4:21761313-21761332 None:intergenic 35.0%
GGAAGATACCATATTAGACA+AGG + chr5.4:21761023-21761042 MS.gene069122:CDS 35.0%
GGAATTTGTAAAATCAGCCA+TGG + chr5.4:21761716-21761735 MS.gene069122:CDS 35.0%
GTTGCCTTTAAGTGATTGTT+GGG - chr5.4:21761061-21761080 None:intergenic 35.0%
TAATAGTAGGTTTGTGAGTG+AGG + chr5.4:21761605-21761624 MS.gene069122:CDS 35.0%
TGTAAAATCAGCCATGGATA+TGG + chr5.4:21761722-21761741 MS.gene069122:CDS 35.0%
TGTTATGGTGAATAGGAATG+AGG + chr5.4:21761695-21761714 MS.gene069122:CDS 35.0%
! AACGATTTTTGTGGGTGATT+AGG + chr5.4:21761367-21761386 MS.gene069122:CDS 35.0%
! CCTTTTTCTTGAACCATGTT+TGG - chr5.4:21761393-21761412 None:intergenic 35.0%
! GTTTTGTCACACAAAGCAAT+TGG + chr5.4:21761486-21761505 MS.gene069122:CDS 35.0%
!! TTTTTGTTGTATTGAGGTGG+TGG - chr5.4:21761179-21761198 None:intergenic 35.0%
!!! GTGCTTTTTTGACACATAGT+GGG + chr5.4:21761508-21761527 MS.gene069122:CDS 35.0%
CAAGAGCAATTTCTTCGAAG+TGG + chr5.4:21761215-21761234 MS.gene069122:CDS 40.0%
CACTTCGAAGAAATTGCTCT+TGG - chr5.4:21761217-21761236 None:intergenic 40.0%
CGTTGCCTTTAAGTGATTGT+TGG - chr5.4:21761062-21761081 None:intergenic 40.0%
CTGACCCAACAATCACTTAA+AGG + chr5.4:21761054-21761073 MS.gene069122:CDS 40.0%
GAAGGGACTACAAAAGAGAA+AGG + chr5.4:21761432-21761451 MS.gene069122:CDS 40.0%
GTGTGACAAAACTTCCTCTT+GGG - chr5.4:21761478-21761497 None:intergenic 40.0%
TATTGAAGGAGCTTGAGGAA+GGG + chr5.4:21761415-21761434 MS.gene069122:CDS 40.0%
TGAGTGAGGTTTGGAGAATT+GGG + chr5.4:21761619-21761638 MS.gene069122:CDS 40.0%
TGTGACAAAACTTCCTCTTG+GGG - chr5.4:21761477-21761496 None:intergenic 40.0%
TGTGTGACAAAACTTCCTCT+TGG - chr5.4:21761479-21761498 None:intergenic 40.0%
! ACTTTGGAGAGTGTGATTTG+TGG + chr5.4:21761540-21761559 MS.gene069122:CDS 40.0%
!! GAGAATTGGGTTGGATATGA+AGG + chr5.4:21761632-21761651 MS.gene069122:CDS 40.0%
!!! CTTTTTTGACACATAGTGGG+TGG + chr5.4:21761511-21761530 MS.gene069122:CDS 40.0%
!!! GGTGCTTTTTTGACACATAG+TGG + chr5.4:21761507-21761526 MS.gene069122:CDS 40.0%
AGAAAGGAATGATTGTGGGG+TGG + chr5.4:21761448-21761467 MS.gene069122:CDS 45.0%
AGCCATGGATATGGCTAAGT+TGG + chr5.4:21761731-21761750 MS.gene069122:CDS 45.0%
AGGACTATTGAAGGAGCTTG+AGG + chr5.4:21761410-21761429 MS.gene069122:CDS 45.0%
CGAAGTGGATAGAACTTGCA+TGG + chr5.4:21761230-21761249 MS.gene069122:CDS 45.0%
CTATTGAAGGAGCTTGAGGA+AGG + chr5.4:21761414-21761433 MS.gene069122:CDS 45.0%
GAAAGGAATGATTGTGGGGT+GGG + chr5.4:21761449-21761468 MS.gene069122:CDS 45.0%
GGGGACTTGAAGACGAATTT+GGG - chr5.4:21761130-21761149 None:intergenic 45.0%
GTAGGTTTGTGAGTGAGGTT+TGG + chr5.4:21761610-21761629 MS.gene069122:CDS 45.0%
GTGAGTGAGGTTTGGAGAAT+TGG + chr5.4:21761618-21761637 MS.gene069122:CDS 45.0%
TGAGGTTTGGAGAATTGGGT+TGG + chr5.4:21761623-21761642 MS.gene069122:CDS 45.0%
TGCCAACTTAGCCATATCCA+TGG - chr5.4:21761736-21761755 None:intergenic 45.0%
TGGATAGAACTTGCATGGTG+TGG + chr5.4:21761235-21761254 MS.gene069122:CDS 45.0%
TGGGGACTTGAAGACGAATT+TGG - chr5.4:21761131-21761150 None:intergenic 45.0%
TTGTTGTAGGAAGAACCACC+AGG - chr5.4:21761774-21761793 None:intergenic 45.0%
! AGACGAATTTGGGAGAGTAC+TGG - chr5.4:21761120-21761139 None:intergenic 45.0%
! CGAAGCAAATTTTCCATGCC+TGG - chr5.4:21760973-21760992 None:intergenic 45.0%
! GTGGAGTGCCTATGATATGT+TGG + chr5.4:21761559-21761578 MS.gene069122:CDS 45.0%
! TAGTGGGTGGAACTCTACTT+TGG + chr5.4:21761524-21761543 MS.gene069122:CDS 45.0%
! TATTGAGGTGGTGGTGAAGA+GGG - chr5.4:21761170-21761189 None:intergenic 45.0%
!! ACGAATTTGGGAGAGTACTG+GGG - chr5.4:21761118-21761137 None:intergenic 45.0%
!! GACGAATTTGGGAGAGTACT+GGG - chr5.4:21761119-21761138 None:intergenic 45.0%
AGGGCCAATGGTGTAGAGTT+TGG - chr5.4:21761151-21761170 None:intergenic 50.0%
CATAAGAAACGTGCCAGGCA+TGG + chr5.4:21760957-21760976 MS.gene069122:CDS 50.0%
CGCATCATAAGAAACGTGCC+AGG + chr5.4:21760952-21760971 MS.gene069122:CDS 50.0%
GGCCAATGGTGTAGAGTTTG+GGG - chr5.4:21761149-21761168 None:intergenic 50.0%
GGGCCAATGGTGTAGAGTTT+GGG - chr5.4:21761150-21761169 None:intergenic 50.0%
GTCCCCAAACTCTACACCAT+TGG + chr5.4:21761144-21761163 MS.gene069122:CDS 50.0%
GTGGGTGATTAGGCCAAACA+TGG + chr5.4:21761377-21761396 MS.gene069122:CDS 50.0%
! GTATTGAGGTGGTGGTGAAG+AGG - chr5.4:21761171-21761190 None:intergenic 50.0%
ACCACCAGGACTCACACTCT+TGG - chr5.4:21761760-21761779 None:intergenic 55.0%
! GCATCCAAGAGTGTGAGTCC+TGG + chr5.4:21761753-21761772 MS.gene069122:CDS 55.0%
! TCCAAGAGTGTGAGTCCTGG+TGG + chr5.4:21761756-21761775 MS.gene069122:CDS 55.0%
! GTGGTGGTGAAGAGGGCCAA+TGG - chr5.4:21761163-21761182 None:intergenic 60.0%
! TGTGGGGTGGGTTCCCCAAG+AGG + chr5.4:21761461-21761480 MS.gene069122:CDS 65.0%


Chromosome Type Strat End Strand Name
chr5.4 gene 21760901 21761836 21760901 ID=MS.gene069122
chr5.4 mRNA 21760901 21761836 21760901 ID=MS.gene069122.t1;Parent=MS.gene069122
chr5.4 exon 21760901 21761836 21760901 ID=MS.gene069122.t1.exon1;Parent=MS.gene069122.t1
chr5.4 CDS 21760901 21761836 21760901 ID=cds.MS.gene069122.t1;Parent=MS.gene069122.t1
Gene Sequence

>MS.gene069122

ATGAGTTATACTAGTGTTCTGGTTAAATTTATAGGAGATGAGGACATGGATCGCATCATAAGAAACGTGCCAGGCATGGAAAATTTGCTTCGATGTAGAGATCTTCCAAGTTTCTGTAAAATGGAAGATACCATATTAGACAAGGTTGTATTTCTGACCCAACAATCACTTAAAGGCAACGCATTAATACTCAACACGTTCGAGAATCTAGAATCCCCAGTACTCTCCCAAATTCGTCTTCAAGTCCCCAAACTCTACACCATTGGCCCTCTTCACCACCACCTCAATACAACAAAAAAATCATCATCATCATCCAAGAGCAATTTCTTCGAAGTGGATAGAACTTGCATGGTGTGGCTCGAATCTCAACCATTGAAGTCAGTTTTATATGTTAGCTTTGGTAGCATCACCCCAATGAAGAGAGAAGAAATCATTGAGATTTGGCACGGTTTATTGAATAGCAAAAAACGATTTTTGTGGGTGATTAGGCCAAACATGGTTCAAGAAAAAGGACTATTGAAGGAGCTTGAGGAAGGGACTACAAAAGAGAAAGGAATGATTGTGGGGTGGGTTCCCCAAGAGGAAGTTTTGTCACACAAAGCAATTGGTGCTTTTTTGACACATAGTGGGTGGAACTCTACTTTGGAGAGTGTGATTTGTGGAGTGCCTATGATATGTTGGCCTTATTTTGCTGATCAACAAATTAATAGTAGGTTTGTGAGTGAGGTTTGGAGAATTGGGTTGGATATGAAGGATGTTTGTGATAGGAATGTTGTTGAGAATATGGTGAATGATGTTATGGTGAATAGGAATGAGGAATTTGTAAAATCAGCCATGGATATGGCTAAGTTGGCATCCAAGAGTGTGAGTCCTGGTGGTTCTTCCTACAACAACTTCCAAGATTTGGTTGAGTATATAAGGTCTACTAGCCCATAA
Protein sequence

>MS.gene069122.t1

MSYTSVLVKFIGDEDMDRIIRNVPGMENLLRCRDLPSFCKMEDTILDKVVFLTQQSLKGNALILNTFENLESPVLSQIRLQVPKLYTIGPLHHHLNTTKKSSSSSKSNFFEVDRTCMVWLESQPLKSVLYVSFGSITPMKREEIIEIWHGLLNSKKRFLWVIRPNMVQEKGLLKELEEGTTKEKGMIVGWVPQEEVLSHKAIGAFLTHSGWNSTLESVICGVPMICWPYFADQQINSRFVSEVWRIGLDMKDVCDRNVVENMVNDVMVNRNEEFVKSAMDMAKLASKSVSPGGSSYNNFQDLVEYIRSTSP