Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06954.t1 | XP_003602215.1 | 99.4 | 358 | 2 | 0 | 1 | 358 | 1 | 358 | 2.90E-208 | 734.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06954.t1 | Q94BN2 | 80.0 | 350 | 68 | 2 | 8 | 356 | 8 | 356 | 2.4e-166 | 586.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06954.t1 | G7J6T4 | 99.4 | 358 | 2 | 0 | 1 | 358 | 1 | 358 | 2.1e-208 | 734.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052224 | MS.gene06954 | 0.807161 | 5.79E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene06954 | MS.gene058418 | PPI |
| MS.gene42684 | MS.gene06954 | PPI |
| MS.gene06954 | MS.gene016160 | PPI |
| MS.gene42624 | MS.gene06954 | PPI |
| MS.gene014976 | MS.gene06954 | PPI |
| MS.gene32768 | MS.gene06954 | PPI |
| MS.gene051552 | MS.gene06954 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06954.t1 | MTR_3g091090 | 99.441 | 358 | 2 | 0 | 1 | 358 | 1 | 358 | 0.0 | 738 |
| MS.gene06954.t1 | MTR_1g028360 | 80.352 | 341 | 63 | 2 | 17 | 357 | 25 | 361 | 0.0 | 546 |
| MS.gene06954.t1 | MTR_5g034470 | 68.167 | 311 | 82 | 4 | 44 | 353 | 44 | 338 | 1.50e-159 | 451 |
| MS.gene06954.t1 | MTR_8g063940 | 65.696 | 309 | 91 | 3 | 45 | 353 | 44 | 337 | 2.45e-154 | 437 |
| MS.gene06954.t1 | MTR_5g034470 | 68.243 | 296 | 77 | 3 | 44 | 338 | 44 | 323 | 9.55e-152 | 431 |
| MS.gene06954.t1 | MTR_3g078190 | 58.719 | 281 | 92 | 4 | 75 | 350 | 50 | 311 | 4.75e-112 | 329 |
| MS.gene06954.t1 | MTR_5g006140 | 33.178 | 214 | 135 | 6 | 95 | 303 | 51 | 261 | 8.05e-33 | 125 |
| MS.gene06954.t1 | MTR_5g006140 | 33.019 | 212 | 134 | 6 | 95 | 301 | 51 | 259 | 1.65e-32 | 122 |
| MS.gene06954.t1 | MTR_1g015300 | 29.078 | 282 | 189 | 8 | 83 | 358 | 46 | 322 | 1.29e-29 | 116 |
| MS.gene06954.t1 | MTR_3g104960 | 28.704 | 216 | 137 | 7 | 95 | 305 | 60 | 263 | 1.10e-19 | 89.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06954.t1 | AT5G53120 | 80.000 | 350 | 68 | 2 | 8 | 356 | 8 | 356 | 0.0 | 558 |
| MS.gene06954.t1 | AT5G53120 | 80.000 | 350 | 68 | 2 | 8 | 356 | 8 | 356 | 0.0 | 558 |
| MS.gene06954.t1 | AT5G53120 | 80.000 | 350 | 68 | 2 | 8 | 356 | 8 | 356 | 0.0 | 558 |
| MS.gene06954.t1 | AT5G53120 | 80.000 | 350 | 68 | 2 | 8 | 356 | 8 | 356 | 0.0 | 558 |
| MS.gene06954.t1 | AT5G53120 | 80.000 | 350 | 68 | 2 | 8 | 356 | 8 | 356 | 0.0 | 558 |
| MS.gene06954.t1 | AT5G53120 | 80.000 | 350 | 68 | 2 | 8 | 356 | 25 | 373 | 0.0 | 558 |
| MS.gene06954.t1 | AT5G53120 | 72.149 | 377 | 76 | 4 | 8 | 356 | 8 | 383 | 0.0 | 549 |
| MS.gene06954.t1 | AT1G23820 | 66.775 | 307 | 86 | 2 | 44 | 350 | 36 | 326 | 4.97e-158 | 446 |
| MS.gene06954.t1 | AT1G70310 | 65.472 | 307 | 92 | 2 | 44 | 350 | 40 | 332 | 4.00e-154 | 437 |
| MS.gene06954.t1 | AT1G23820 | 60.839 | 286 | 92 | 2 | 14 | 293 | 44 | 315 | 1.28e-128 | 372 |
| MS.gene06954.t1 | AT5G19530 | 29.365 | 252 | 170 | 6 | 57 | 303 | 14 | 262 | 6.84e-33 | 125 |
| MS.gene06954.t1 | AT5G19530 | 29.365 | 252 | 170 | 6 | 57 | 303 | 21 | 269 | 9.24e-33 | 125 |
Find 97 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTCACTCTACCGTTGTTTC+GGG | 0.194129 | 3.1:-73088052 | MS.gene06954:CDS |
| GTGGAGATGGTGGGGTTCTA+AGG | 0.243049 | 3.1:-73086749 | MS.gene06954:CDS |
| ATTTGTCGAGAAACATTTAA+AGG | 0.261361 | 3.1:-73085104 | MS.gene06954:CDS |
| TTGTCACTCTACCGTTGTTT+CGG | 0.279338 | 3.1:-73088053 | MS.gene06954:CDS |
| CGGTGGAGTTCTTTGTAATA+TGG | 0.303405 | 3.1:-73085174 | MS.gene06954:CDS |
| TCTTCTCTACTTTGATTGAA+TGG | 0.326205 | 3.1:+73087430 | None:intergenic |
| CCTTCCCATCCATAGTCTTC+TGG | 0.342826 | 3.1:+73088158 | None:intergenic |
| ATGGTTTCTCTACAAGTTCC+TGG | 0.346919 | 3.1:+73085228 | None:intergenic |
| CTTCTCTACTTTGATTGAAT+GGG | 0.348057 | 3.1:+73087431 | None:intergenic |
| TGGAGAGCATGTCTTGAATA+AGG | 0.362663 | 3.1:+73085126 | None:intergenic |
| TTAGTTGTTGGTGGTGGAGA+TGG | 0.363986 | 3.1:-73086762 | MS.gene06954:CDS |
| ATAAGCATCGGAGGAATCTT+AGG | 0.367711 | 3.1:-73084303 | MS.gene06954:CDS |
| TTTAAATGTTTCTCGACAAA+TGG | 0.372736 | 3.1:+73085106 | None:intergenic |
| TGACAATTGGCCTCCAACTC+AGG | 0.374602 | 3.1:+73088070 | None:intergenic |
| GGGAAAGTTCTTGTACTTGA+TGG | 0.375756 | 3.1:-73087266 | MS.gene06954:CDS |
| TTGGTATGCAGTGGTGTGAT+AGG | 0.380687 | 3.1:-73084406 | MS.gene06954:intron |
| GTTGTTGGTGGTGGAGATGG+TGG | 0.389147 | 3.1:-73086759 | MS.gene06954:CDS |
| TTGTTGGTGGTGGAGATGGT+GGG | 0.396225 | 3.1:-73086758 | MS.gene06954:CDS |
| GGCTTCAGCCCCTGAGTTGG+AGG | 0.399000 | 3.1:-73088080 | MS.gene06954:CDS |
| AATCCCATTGAAAAGTTAGA+AGG | 0.400616 | 3.1:-73084331 | MS.gene06954:CDS |
| TGGATGGGAAGGCGAGTAAC+AGG | 0.416616 | 3.1:-73088147 | MS.gene06954:CDS |
| ACGGCGTCATACCTCCCTTC+AGG | 0.420015 | 3.1:+73086361 | None:intergenic |
| GTCACTGTACCAAGAGGTCT+TGG | 0.430881 | 3.1:-73087391 | MS.gene06954:CDS |
| AACAGTCACCTGGCCACATT+GGG | 0.439358 | 3.1:+73087863 | None:intergenic |
| TTTGGAATGCCAGAAGACTA+TGG | 0.441748 | 3.1:-73088167 | MS.gene06954:CDS |
| GGCGAGTAACAGGAATGGTT+TGG | 0.443384 | 3.1:-73088137 | MS.gene06954:CDS |
| TTCTCTACAAGTTCCTGGGC+AGG | 0.463913 | 3.1:+73085233 | None:intergenic |
| GGAAAGTTCTTGTACTTGAT+GGG | 0.470422 | 3.1:-73087265 | MS.gene06954:CDS |
| TCAGCATCTCAAACTTGCTC+TGG | 0.472000 | 3.1:-73088022 | MS.gene06954:intron |
| TTCAACAACCCAATGTGGCC+AGG | 0.474309 | 3.1:-73087871 | MS.gene06954:intron |
| ACCTCATTCTTCAGAAATGC+AGG | 0.477276 | 3.1:+73084099 | None:intergenic |
| TGTTGGTGGTGGAGATGGTG+GGG | 0.479762 | 3.1:-73086757 | MS.gene06954:CDS |
| GGACGCCGTAGAAAGAGGTT+TGG | 0.482254 | 3.1:-73088185 | MS.gene06954:CDS |
| ATCTGAGGAATCAACAATTA+CGG | 0.484857 | 3.1:+73086342 | None:intergenic |
| TATTTGTGAGATAGATAAGA+TGG | 0.498631 | 3.1:-73086691 | MS.gene06954:CDS |
| GCATTCCAAACCTCTTTCTA+CGG | 0.502649 | 3.1:+73088180 | None:intergenic |
| AAGGTTCTGTACATTATGCA+TGG | 0.503330 | 3.1:-73085085 | MS.gene06954:CDS |
| GTAATATGGCAGAAAGTATG+TGG | 0.507464 | 3.1:-73085160 | MS.gene06954:CDS |
| CAACTCAGGGGCTGAAGCCA+TGG | 0.509823 | 3.1:+73088084 | None:intergenic |
| TTCATGTTGTTTGAAAGCCA+TGG | 0.510589 | 3.1:-73088101 | MS.gene06954:CDS |
| TGGAGATGGTGGGGTTCTAA+GGG | 0.514791 | 3.1:-73086748 | MS.gene06954:CDS |
| TGGTATGCAGTGGTGTGATA+GGG | 0.519393 | 3.1:-73084405 | MS.gene06954:intron |
| AAACTCTACCTTGGATATGT+TGG | 0.521419 | 3.1:+73085053 | None:intergenic |
| GAATGCCAGAAGACTATGGA+TGG | 0.522599 | 3.1:-73088163 | MS.gene06954:CDS |
| TAACAGTCACCTGGCCACAT+TGG | 0.523868 | 3.1:+73087862 | None:intergenic |
| AACAACGGTAGAGTGACAAT+TGG | 0.525820 | 3.1:+73088057 | None:intergenic |
| AAAGGATGAATGTGCTTACC+AGG | 0.527996 | 3.1:-73087225 | MS.gene06954:CDS |
| TTTCTTAAACGTGCACCTGA+AGG | 0.534171 | 3.1:-73086376 | MS.gene06954:CDS |
| GACAATTGGCCTCCAACTCA+GGG | 0.536122 | 3.1:+73088071 | None:intergenic |
| GGAGATGAGCTATCATCTCC+TGG | 0.549717 | 3.1:+73087207 | None:intergenic |
| TTCTTAAACGTGCACCTGAA+GGG | 0.550495 | 3.1:-73086375 | MS.gene06954:CDS |
| TGGTTTCTCTACAAGTTCCT+GGG | 0.552051 | 3.1:+73085229 | None:intergenic |
| TTTCTTCTATGCTCAACAGA+GGG | 0.553053 | 3.1:-73084382 | MS.gene06954:CDS |
| CATGGCTTCAGCCCCTGAGT+TGG | 0.564808 | 3.1:-73088083 | MS.gene06954:CDS |
| TGTTGATTCCTCAGATCCTG+TGG | 0.566155 | 3.1:-73086335 | MS.gene06954:CDS |
| GGGACGGAATGGAACAGAGG+GGG | 0.567127 | 3.1:+73087186 | None:intergenic |
| CATATTACAAAGAACTCCAC+CGG | 0.568035 | 3.1:+73085175 | None:intergenic |
| TATGCTCCACAGAGCTGTGG+CGG | 0.569419 | 3.1:+73086718 | None:intergenic |
| AGGTTCTGTACATTATGCAT+GGG | 0.569562 | 3.1:-73085084 | MS.gene06954:CDS |
| TTGTAATTTAGGTCCTGCCC+AGG | 0.572216 | 3.1:-73085246 | MS.gene06954:intron |
| ATGCTCCACAGAGCTGTGGC+GGG | 0.576101 | 3.1:+73086719 | None:intergenic |
| CCAGAAGACTATGGATGGGA+AGG | 0.584299 | 3.1:-73088158 | MS.gene06954:CDS |
| TAACAGGAATGGTTTGGAGA+AGG | 0.585433 | 3.1:-73088131 | MS.gene06954:CDS |
| GATTGTTCAGTTGACTGAAA+AGG | 0.585805 | 3.1:-73087243 | MS.gene06954:CDS |
| TTACTCACCCACAGGATCTG+AGG | 0.608698 | 3.1:+73086327 | None:intergenic |
| TAGAAGGTGCTGATAAGCAT+CGG | 0.610775 | 3.1:-73084315 | MS.gene06954:CDS |
| ACTCTACCGTTGTTTCGGGG+TGG | 0.610888 | 3.1:-73088048 | MS.gene06954:CDS |
| GTACACTTGCATGTTGGTGA+TGG | 0.618204 | 3.1:-73086537 | MS.gene06954:intron |
| GTCACTCTACCGTTGTTTCG+GGG | 0.620935 | 3.1:-73088051 | MS.gene06954:CDS |
| GCCTGCATTTCTGAAGAATG+AGG | 0.621479 | 3.1:-73084100 | MS.gene06954:CDS |
| ATGGCTTTCAAACAACATGA+AGG | 0.623348 | 3.1:+73088103 | None:intergenic |
| CAAGCAAGCATTGCTACTGA+CGG | 0.624255 | 3.1:+73084067 | None:intergenic |
| TTTATTTCAACAACCCAATG+TGG | 0.626443 | 3.1:-73087876 | MS.gene06954:CDS |
| CAAGTGTTCCAACATATCCA+AGG | 0.643163 | 3.1:-73085061 | MS.gene06954:intron |
| CAATATGCTCCACAGAGCTG+TGG | 0.644313 | 3.1:+73086715 | None:intergenic |
| TTCTTCTATGCTCAACAGAG+GGG | 0.645049 | 3.1:-73084381 | MS.gene06954:CDS |
| GTTTCTTCTATGCTCAACAG+AGG | 0.646189 | 3.1:-73084383 | MS.gene06954:CDS |
| TTAAACGTGCACCTGAAGGG+AGG | 0.651100 | 3.1:-73086372 | MS.gene06954:CDS |
| TCTTATGCAGATACATACAG+CGG | 0.652959 | 3.1:-73084133 | MS.gene06954:intron |
| AGTATCCCGCCACAGCTCTG+TGG | 0.654087 | 3.1:-73086724 | MS.gene06954:CDS |
| GGGAAGGCGAGTAACAGGAA+TGG | 0.657558 | 3.1:-73088142 | MS.gene06954:CDS |
| GGGTTCACAAAATCAACATG+CGG | 0.658739 | 3.1:+73084358 | None:intergenic |
| ATATCTAAGGCATTAAGACC+CGG | 0.667528 | 3.1:-73085194 | MS.gene06954:CDS |
| CCTCGTGTACACTTGCATGT+TGG | 0.668273 | 3.1:-73086543 | MS.gene06954:CDS |
| AGAAAAGTCACTGTACCAAG+AGG | 0.670694 | 3.1:-73087397 | MS.gene06954:CDS |
| AATGCCAGAAGACTATGGAT+GGG | 0.672149 | 3.1:-73088162 | MS.gene06954:CDS |
| CCAACATGCAAGTGTACACG+AGG | 0.673468 | 3.1:+73086543 | None:intergenic |
| TGAGAACCACCCCGAAACAA+CGG | 0.682894 | 3.1:+73088042 | None:intergenic |
| GTTGATTCCTCAGATCCTGT+GGG | 0.684990 | 3.1:-73086334 | MS.gene06954:intron |
| ATATTACAAAGAACTCCACC+GGG | 0.685339 | 3.1:+73085176 | None:intergenic |
| GGGGACGGAATGGAACAGAG+GGG | 0.690224 | 3.1:+73087185 | None:intergenic |
| TCAAACCCAACAGCTAACTG+TGG | 0.690553 | 3.1:+73086570 | None:intergenic |
| AAGGTGCTGATAAGCATCGG+AGG | 0.691606 | 3.1:-73084312 | MS.gene06954:CDS |
| TCTTAGGTTCTATAACTCAG+AGG | 0.692345 | 3.1:-73084287 | MS.gene06954:intron |
| ACAATTGGCCTCCAACTCAG+GGG | 0.704373 | 3.1:+73088072 | None:intergenic |
| TCTAAGGCATTAAGACCCGG+TGG | 0.707720 | 3.1:-73085191 | MS.gene06954:CDS |
| CATTTCTGAAGAATGAGGTG+AGG | 0.708001 | 3.1:-73084095 | MS.gene06954:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATAAGTAAATACAATATA+TGG | + | chr3.1:73088021-73088040 | None:intergenic | 10.0% |
| !!! | ACTTATTTAACTTTATTTAT+TGG | - | chr3.1:73088033-73088052 | MS.gene06954:CDS | 10.0% |
| !!! | TAGTTCAATATAAATATTTT+AGG | + | chr3.1:73086893-73086912 | None:intergenic | 10.0% |
| !! | AAAATATTAAAGAATAGAGT+AGG | + | chr3.1:73085305-73085324 | None:intergenic | 15.0% |
| !! | TCTGATTTATCTATTTATTT+AGG | + | chr3.1:73086352-73086371 | None:intergenic | 15.0% |
| !! | TGAGTAATTTAAATTCAAAA+TGG | - | chr3.1:73085959-73085978 | MS.gene06954:intron | 15.0% |
| !!! | AATTTTTATGTTGTTAATTC+AGG | - | chr3.1:73085483-73085502 | MS.gene06954:intron | 15.0% |
| !!! | ATATCTTTGAAAATAACTTT+TGG | - | chr3.1:73084654-73084673 | MS.gene06954:intron | 15.0% |
| !!! | CTTTGTTATAATTGAATTTT+TGG | - | chr3.1:73087684-73087703 | MS.gene06954:intron | 15.0% |
| !!! | TAATTTTTATGTGTATATGA+CGG | - | chr3.1:73084777-73084796 | MS.gene06954:intron | 15.0% |
| !!! | TTCTTTAAAAGTAAAATCAA+AGG | + | chr3.1:73087292-73087311 | None:intergenic | 15.0% |
| !! | AAACAATATGAAAGAAATCA+CGG | + | chr3.1:73086753-73086772 | None:intergenic | 20.0% |
| !! | ACACATAAAAATTACATACT+TGG | + | chr3.1:73084771-73084790 | None:intergenic | 20.0% |
| !! | CATAAAAATTATTTAGCAGA+CGG | + | chr3.1:73085473-73085492 | None:intergenic | 20.0% |
| !! | CATTACATGAAATTAATAAG+TGG | + | chr3.1:73086939-73086958 | None:intergenic | 20.0% |
| !! | GAATAAAAAGAGAACAATAT+AGG | + | chr3.1:73084928-73084947 | None:intergenic | 20.0% |
| !! | TTAGATATAGTCTCAAAAAA+TGG | + | chr3.1:73087064-73087083 | None:intergenic | 20.0% |
| !!! | ACTAAACATGATTGTAATTT+TGG | - | chr3.1:73087792-73087811 | MS.gene06954:intron | 20.0% |
| !!! | ATCAAAAGACTTTACATTTT+TGG | + | chr3.1:73085110-73085129 | None:intergenic | 20.0% |
| !!! | ATTGAATTTTTGGTTTAAGA+AGG | - | chr3.1:73087694-73087713 | MS.gene06954:intron | 20.0% |
| !!! | ATTTTAGGAACAAAAATTCA+GGG | + | chr3.1:73086878-73086897 | None:intergenic | 20.0% |
| !!! | ATTTTTTACAGAAAAATCAG+AGG | - | chr3.1:73084365-73084384 | MS.gene06954:CDS | 20.0% |
| !!! | ATTTTTTGAGACTATATCTA+AGG | - | chr3.1:73087063-73087082 | MS.gene06954:intron | 20.0% |
| !!! | CAATATCACTTTTGTAATTT+AGG | - | chr3.1:73087013-73087032 | MS.gene06954:intron | 20.0% |
| !!! | TATTTTAGGAACAAAAATTC+AGG | + | chr3.1:73086879-73086898 | None:intergenic | 20.0% |
| !!! | TCAAAAGACTTTACATTTTT+GGG | + | chr3.1:73085109-73085128 | None:intergenic | 20.0% |
| !!! | TTTATAACATTTTCAACAAG+TGG | + | chr3.1:73087544-73087563 | None:intergenic | 20.0% |
| !!! | TTTCTTTCATATTGTTTTGT+TGG | - | chr3.1:73086756-73086775 | MS.gene06954:CDS | 20.0% |
| !!! | TTTTACAGTCATTAACATAT+GGG | - | chr3.1:73084984-73085003 | MS.gene06954:intron | 20.0% |
| !!! | TTTTTACAGTCATTAACATA+TGG | - | chr3.1:73084983-73085002 | MS.gene06954:intron | 20.0% |
| ! | AAATTGCTTAACTAGATCAT+TGG | - | chr3.1:73086161-73086180 | MS.gene06954:intron | 25.0% |
| ! | AACAAAAATTCAGGGAAAAT+CGG | + | chr3.1:73086870-73086889 | None:intergenic | 25.0% |
| ! | ACAAAATATTGAAGTAACGT+TGG | - | chr3.1:73085179-73085198 | MS.gene06954:CDS | 25.0% |
| ! | ACAAAATTTGTGATTATGGT+TGG | - | chr3.1:73087437-73087456 | MS.gene06954:CDS | 25.0% |
| ! | ATCAAACTTACTACATATTG+TGG | - | chr3.1:73084712-73084731 | MS.gene06954:intron | 25.0% |
| ! | ATGAAATGAACTTATTGCAA+TGG | - | chr3.1:73085648-73085667 | MS.gene06954:intron | 25.0% |
| ! | ATGACTTTAGATTGTTTCAT+TGG | - | chr3.1:73086709-73086728 | MS.gene06954:CDS | 25.0% |
| ! | ATGGTTATTGATGTAAGTTA+TGG | - | chr3.1:73085598-73085617 | MS.gene06954:intron | 25.0% |
| ! | ATTTGTCGAGAAACATTTAA+AGG | - | chr3.1:73087166-73087185 | MS.gene06954:intron | 25.0% |
| ! | CAGTAAATAATGCACATTAT+TGG | - | chr3.1:73085997-73086016 | MS.gene06954:intron | 25.0% |
| ! | CTGAAATTTCTCATAAATGA+AGG | + | chr3.1:73086687-73086706 | None:intergenic | 25.0% |
| ! | GAGATACTATTAGATATTGA+AGG | - | chr3.1:73086488-73086507 | MS.gene06954:intron | 25.0% |
| ! | GATACTCGAAAATTATAAAG+TGG | - | chr3.1:73086428-73086447 | MS.gene06954:intron | 25.0% |
| ! | GTTAATCACTTCTCATTTAT+AGG | + | chr3.1:73084953-73084972 | None:intergenic | 25.0% |
| ! | TAAAAATAACCAACCAGAAA+AGG | + | chr3.1:73086982-73087001 | None:intergenic | 25.0% |
| ! | TATGTATCTGCATAAGAAAA+GGG | + | chr3.1:73088134-73088153 | None:intergenic | 25.0% |
| ! | TATTTGTGAGATAGATAAGA+TGG | - | chr3.1:73085579-73085598 | MS.gene06954:intron | 25.0% |
| ! | TTATCATCTTGACAATGTAT+TGG | - | chr3.1:73085332-73085351 | MS.gene06954:intron | 25.0% |
| ! | TTTAAATGTTTCTCGACAAA+TGG | + | chr3.1:73087167-73087186 | None:intergenic | 25.0% |
| !! | AAACAAAAGATTGTTGTTAG+TGG | + | chr3.1:73084332-73084351 | None:intergenic | 25.0% |
| !! | AACATTTAATTTATCCTCCT+TGG | + | chr3.1:73084680-73084699 | None:intergenic | 25.0% |
| !! | AACCATAATCACAAATTTTG+TGG | + | chr3.1:73087438-73087457 | None:intergenic | 25.0% |
| !! | ACCATAATCACAAATTTTGT+GGG | + | chr3.1:73087437-73087456 | None:intergenic | 25.0% |
| !! | AGTTAGTTATGTTAGTTTCA+GGG | + | chr3.1:73086537-73086556 | None:intergenic | 25.0% |
| !! | CAAAAGACTTTACATTTTTG+GGG | + | chr3.1:73085108-73085127 | None:intergenic | 25.0% |
| !! | TAGTTAGTTATGTTAGTTTC+AGG | + | chr3.1:73086538-73086557 | None:intergenic | 25.0% |
| !! | TCTATATTTTCTCACTAGTA+TGG | - | chr3.1:73086138-73086157 | MS.gene06954:intron | 25.0% |
| !! | TTACTGGTTACAAACTATTA+AGG | - | chr3.1:73085816-73085835 | MS.gene06954:intron | 25.0% |
| !! | TTTGTAACATTTTCAACAAG+TGG | + | chr3.1:73087507-73087526 | None:intergenic | 25.0% |
| !!! | AAAAGACTTTACATTTTTGG+GGG | + | chr3.1:73085107-73085126 | None:intergenic | 25.0% |
| !!! | AAGGGTAATTTTTTTACAGT+GGG | - | chr3.1:73087354-73087373 | MS.gene06954:intron | 25.0% |
| !!! | AGATACTGATTCATATTTGT+AGG | - | chr3.1:73086309-73086328 | MS.gene06954:intron | 25.0% |
| !!! | AGTATCTTTTTTGTCTTTGA+TGG | + | chr3.1:73086581-73086600 | None:intergenic | 25.0% |
| !!! | GATACTGATTCATATTTGTA+GGG | - | chr3.1:73086310-73086329 | MS.gene06954:intron | 25.0% |
| !!! | GTATCTTTTTTGTCTTTGAT+GGG | + | chr3.1:73086580-73086599 | None:intergenic | 25.0% |
| !!! | TAAGGGTAATTTTTTTACAG+TGG | - | chr3.1:73087353-73087372 | MS.gene06954:intron | 25.0% |
| !!! | TATTGCAATGGTTATTTTGT+AGG | - | chr3.1:73085660-73085679 | MS.gene06954:intron | 25.0% |
| !!! | TGTGGGTTTTAGATAAAAAA+AGG | - | chr3.1:73086224-73086243 | MS.gene06954:intron | 25.0% |
| !!! | TTAATTCAGGTTTTAGTTGT+TGG | - | chr3.1:73085496-73085515 | MS.gene06954:intron | 25.0% |
| AAAAATTATTTAGCAGACGG+TGG | + | chr3.1:73085470-73085489 | None:intergenic | 30.0% | |
| AATCATGTTTAGTAACTGTC+AGG | + | chr3.1:73087785-73087804 | None:intergenic | 30.0% | |
| AATCCCATTGAAAAGTTAGA+AGG | - | chr3.1:73087939-73087958 | MS.gene06954:intron | 30.0% | |
| AATTCAATAGCTGGCAAAAA+TGG | + | chr3.1:73085876-73085895 | None:intergenic | 30.0% | |
| AATTTAAATTACTCACCCAC+AGG | + | chr3.1:73085954-73085973 | None:intergenic | 30.0% | |
| ACAGTTCTCTATTATCACTT+AGG | - | chr3.1:73085217-73085236 | MS.gene06954:CDS | 30.0% | |
| ACATGTAGAAACAGAAAACT+TGG | + | chr3.1:73087325-73087344 | None:intergenic | 30.0% | |
| AGTTCTCTATTATCACTTAG+GGG | - | chr3.1:73085219-73085238 | MS.gene06954:CDS | 30.0% | |
| ATAACTCAGAGGTAAGTATA+TGG | - | chr3.1:73087994-73088013 | MS.gene06954:intron | 30.0% | |
| ATATTGAAGGAGTTTGAAAG+AGG | - | chr3.1:73086501-73086520 | MS.gene06954:intron | 30.0% | |
| ATCATGTTTAGTAACTGTCA+GGG | + | chr3.1:73087784-73087803 | None:intergenic | 30.0% | |
| ATCTGAGGAATCAACAATTA+CGG | + | chr3.1:73085931-73085950 | None:intergenic | 30.0% | |
| ATTCAATAGCTGGCAAAAAT+GGG | + | chr3.1:73085875-73085894 | None:intergenic | 30.0% | |
| CAGTAAATTAAAGCCATAGT+TGG | + | chr3.1:73085802-73085821 | None:intergenic | 30.0% | |
| CAGTTCTCTATTATCACTTA+GGG | - | chr3.1:73085218-73085237 | MS.gene06954:CDS | 30.0% | |
| CGTTTAAGAAATTCAATAGC+TGG | + | chr3.1:73085885-73085904 | None:intergenic | 30.0% | |
| CTTCTCTACTTTGATTGAAT+GGG | + | chr3.1:73084842-73084861 | None:intergenic | 30.0% | |
| GAAAGGAAATGGGAAATATA+TGG | + | chr3.1:73084305-73084324 | None:intergenic | 30.0% | |
| GAGACTGACTAAAATTTGAA+AGG | - | chr3.1:73085398-73085417 | MS.gene06954:intron | 30.0% | |
| GTATGTATCTGCATAAGAAA+AGG | + | chr3.1:73088135-73088154 | None:intergenic | 30.0% | |
| GTTTACACTATTCAAATTGC+TGG | - | chr3.1:73087236-73087255 | MS.gene06954:CDS | 30.0% | |
| TCCCACAAAATTTGTGATTA+TGG | - | chr3.1:73087433-73087452 | MS.gene06954:CDS | 30.0% | |
| TCTTCTCTACTTTGATTGAA+TGG | + | chr3.1:73084843-73084862 | None:intergenic | 30.0% | |
| TGCTTATTGTATTCCTTTCT+TGG | - | chr3.1:73087845-73087864 | MS.gene06954:intron | 30.0% | |
| TGGTCTAATGAGATAAACTA+AGG | - | chr3.1:73086448-73086467 | MS.gene06954:intron | 30.0% | |
| TGTGTTAGATTGAGATACAA+GGG | + | chr3.1:73086193-73086212 | None:intergenic | 30.0% | |
| TTCATGTATACTTGCAACTT+TGG | - | chr3.1:73084455-73084474 | MS.gene06954:intron | 30.0% | |
| TTTATTTCAACAACCCAATG+TGG | - | chr3.1:73084394-73084413 | MS.gene06954:CDS | 30.0% | |
| ! | AAAGATTGTTGTTAGTGGAA+TGG | + | chr3.1:73084327-73084346 | None:intergenic | 30.0% |
| ! | AACTTTTCAATGGGATTGAT+GGG | + | chr3.1:73087936-73087955 | None:intergenic | 30.0% |
| ! | AGATTTTTACTTGCCTAGTT+TGG | - | chr3.1:73087721-73087740 | MS.gene06954:intron | 30.0% |
| ! | ATGAAAAAAGTCGTGTTTTG+AGG | - | chr3.1:73086111-73086130 | MS.gene06954:intron | 30.0% |
| ! | GTTAGTTATGTTAGTTTCAG+GGG | + | chr3.1:73086536-73086555 | None:intergenic | 30.0% |
| ! | TAACTTTTCAATGGGATTGA+TGG | + | chr3.1:73087937-73087956 | None:intergenic | 30.0% |
| ! | TTGAAAATAACTTTTGGCCA+AGG | - | chr3.1:73084660-73084679 | MS.gene06954:intron | 30.0% |
| ! | TTGGTTCATCTTGATAGTAT+TGG | - | chr3.1:73087811-73087830 | MS.gene06954:intron | 30.0% |
| !! | CAACTATGGCTTTAATTTAC+TGG | - | chr3.1:73085800-73085819 | MS.gene06954:intron | 30.0% |
| !! | TCTTGACAATGTATTGGTTA+TGG | - | chr3.1:73085338-73085357 | MS.gene06954:intron | 30.0% |
| !! | TGGTTATTTTGTAGGTTTCT+AGG | - | chr3.1:73085668-73085687 | MS.gene06954:intron | 30.0% |
| AAACTCTACCTTGGATATGT+TGG | + | chr3.1:73087220-73087239 | None:intergenic | 35.0% | |
| AACAGAGCTGATATGAATAG+TGG | + | chr3.1:73086643-73086662 | None:intergenic | 35.0% | |
| AAGGTTCTGTACATTATGCA+TGG | - | chr3.1:73087185-73087204 | MS.gene06954:CDS | 35.0% | |
| AATTACTGAAGATCCATCAG+TGG | + | chr3.1:73087408-73087427 | None:intergenic | 35.0% | |
| ACTAGGCAAGTAAAAATCTC+AGG | + | chr3.1:73087720-73087739 | None:intergenic | 35.0% | |
| AGGTTCTGTACATTATGCAT+GGG | - | chr3.1:73087186-73087205 | MS.gene06954:CDS | 35.0% | |
| ATATTACAAAGAACTCCACC+GGG | + | chr3.1:73087097-73087116 | None:intergenic | 35.0% | |
| ATATTCATCCTTCTCCATGA+AGG | + | chr3.1:73084601-73084620 | None:intergenic | 35.0% | |
| ATGCTCTTATATGTGTATGG+AGG | - | chr3.1:73085366-73085385 | MS.gene06954:intron | 35.0% | |
| ATGGCTTTCAAACAACATGA+AGG | + | chr3.1:73084170-73084189 | None:intergenic | 35.0% | |
| ATTACTGAAGATCCATCAGT+GGG | + | chr3.1:73087407-73087426 | None:intergenic | 35.0% | |
| ATTAGTGTGCTTAAAGGTTG+TGG | - | chr3.1:73087628-73087647 | MS.gene06954:intron | 35.0% | |
| CATATTACAAAGAACTCCAC+CGG | + | chr3.1:73087098-73087117 | None:intergenic | 35.0% | |
| CCAATGCTCTTATATGTGTA+TGG | - | chr3.1:73085363-73085382 | MS.gene06954:intron | 35.0% | |
| GAATAGTGTAAACTCTACCT+TGG | + | chr3.1:73087229-73087248 | None:intergenic | 35.0% | |
| GATCTGATCATCAGTGTATT+GGG | - | chr3.1:73085127-73085146 | MS.gene06954:CDS | 35.0% | |
| GATGGATCTTCAGTAATTGT+TGG | - | chr3.1:73087410-73087429 | MS.gene06954:CDS | 35.0% | |
| GATTGTTCAGTTGACTGAAA+AGG | - | chr3.1:73085027-73085046 | MS.gene06954:intron | 35.0% | |
| GGAAAGTTCTTGTACTTGAT+GGG | - | chr3.1:73085005-73085024 | MS.gene06954:intron | 35.0% | |
| GTGTGTTAGATTGAGATACA+AGG | + | chr3.1:73086194-73086213 | None:intergenic | 35.0% | |
| TAGATTGAGATACAAGGGTT+GGG | + | chr3.1:73086188-73086207 | None:intergenic | 35.0% | |
| TAGTGGAATGGAAAGGAAAT+GGG | + | chr3.1:73084315-73084334 | None:intergenic | 35.0% | |
| TATGCAAAATAACAGTCACC+TGG | + | chr3.1:73084420-73084439 | None:intergenic | 35.0% | |
| TCATGGAGAAGGATGAATAT+GGG | - | chr3.1:73084601-73084620 | MS.gene06954:intron | 35.0% | |
| TCTACATGTTGTGAGAGTAA+GGG | - | chr3.1:73087336-73087355 | MS.gene06954:intron | 35.0% | |
| TCTTAGGTTCTATAACTCAG+AGG | - | chr3.1:73087983-73088002 | MS.gene06954:intron | 35.0% | |
| TCTTATGCAGATACATACAG+CGG | - | chr3.1:73088137-73088156 | MS.gene06954:CDS | 35.0% | |
| TGATCTGATCATCAGTGTAT+TGG | - | chr3.1:73085126-73085145 | MS.gene06954:CDS | 35.0% | |
| TGGAAACAGTATGGGAAAAA+AGG | + | chr3.1:73085450-73085469 | None:intergenic | 35.0% | |
| TTAGATTGAGATACAAGGGT+TGG | + | chr3.1:73086189-73086208 | None:intergenic | 35.0% | |
| TTAGTGGAATGGAAAGGAAA+TGG | + | chr3.1:73084316-73084335 | None:intergenic | 35.0% | |
| TTCATGGAGAAGGATGAATA+TGG | - | chr3.1:73084600-73084619 | MS.gene06954:intron | 35.0% | |
| TTCTACATGTTGTGAGAGTA+AGG | - | chr3.1:73087335-73087354 | MS.gene06954:intron | 35.0% | |
| TTGAGACTGCTGAATATCAA+AGG | + | chr3.1:73085271-73085290 | None:intergenic | 35.0% | |
| TTTCACATTACCTTCTTGAG+AGG | - | chr3.1:73087656-73087675 | MS.gene06954:intron | 35.0% | |
| TTTCTTCTATGCTCAACAGA+GGG | - | chr3.1:73087888-73087907 | MS.gene06954:CDS | 35.0% | |
| ! | AAAATAACTTTTGGCCAAGG+AGG | - | chr3.1:73084663-73084682 | MS.gene06954:intron | 35.0% |
| ! | AACACACTTTTCGAAGTTGT+GGG | - | chr3.1:73086207-73086226 | MS.gene06954:intron | 35.0% |
| ! | ACTTTTCAATGGGATTGATG+GGG | + | chr3.1:73087935-73087954 | None:intergenic | 35.0% |
| ! | AGCACCTTCTAACTTTTCAA+TGG | + | chr3.1:73087946-73087965 | None:intergenic | 35.0% |
| ! | ATATCTAAGGCATTAAGACC+CGG | - | chr3.1:73087076-73087095 | MS.gene06954:intron | 35.0% |
| ! | CCATACACATATAAGAGCAT+TGG | + | chr3.1:73085366-73085385 | None:intergenic | 35.0% |
| ! | GAGTTAGATTCTTCCTTTTC+TGG | - | chr3.1:73086966-73086985 | MS.gene06954:intron | 35.0% |
| ! | GCACCTTCTAACTTTTCAAT+GGG | + | chr3.1:73087945-73087964 | None:intergenic | 35.0% |
| ! | GTAATATGGCAGAAAGTATG+TGG | - | chr3.1:73087110-73087129 | MS.gene06954:intron | 35.0% |
| ! | GTGTTGCTGGAAAAATTCAT+AGG | - | chr3.1:73087461-73087480 | MS.gene06954:intron | 35.0% |
| ! | TAACACACTTTTCGAAGTTG+TGG | - | chr3.1:73086206-73086225 | MS.gene06954:intron | 35.0% |
| ! | TTCATGTTGTTTGAAAGCCA+TGG | - | chr3.1:73084169-73084188 | MS.gene06954:intron | 35.0% |
| ! | TTGTTGTTAGTGGAATGGAA+AGG | + | chr3.1:73084322-73084341 | None:intergenic | 35.0% |
| ! | TTTGGTGTGTGTCTATCATT+AGG | - | chr3.1:73084811-73084830 | MS.gene06954:intron | 35.0% |
| ! | TTTTTCCACAGTTAGCTGTT+GGG | - | chr3.1:73085695-73085714 | MS.gene06954:intron | 35.0% |
| !! | CAATCTTTTGTTTCATCGTG+TGG | - | chr3.1:73084339-73084358 | MS.gene06954:CDS | 35.0% |
| !! | GTTTGTTATCATGCCAACTA+TGG | - | chr3.1:73085786-73085805 | MS.gene06954:intron | 35.0% |
| !! | TAGATTCTTCCTTTTCTGGT+TGG | - | chr3.1:73086970-73086989 | MS.gene06954:intron | 35.0% |
| !!! | AAAAAAGTCGTGTTTTGAGG+AGG | - | chr3.1:73086114-73086133 | MS.gene06954:intron | 35.0% |
| !!! | ATTCAGGTTTTAGTTGTTGG+TGG | - | chr3.1:73085499-73085518 | MS.gene06954:intron | 35.0% |
| !!! | GGTGACTGTTATTTTGCATA+TGG | - | chr3.1:73084420-73084439 | MS.gene06954:intron | 35.0% |
| !!! | TGGCATTTTGGAACAGTATA+GGG | - | chr3.1:73087741-73087760 | MS.gene06954:intron | 35.0% |
| !!! | TTGGCATTTTGGAACAGTAT+AGG | - | chr3.1:73087740-73087759 | MS.gene06954:intron | 35.0% |
| !!! | TTTTTTCCACAGTTAGCTGT+TGG | - | chr3.1:73085694-73085713 | MS.gene06954:intron | 35.0% |
| AAAGGATGAATGTGCTTACC+AGG | - | chr3.1:73085045-73085064 | MS.gene06954:intron | 40.0% | |
| AACAACGGTAGAGTGACAAT+TGG | + | chr3.1:73084216-73084235 | None:intergenic | 40.0% | |
| AATAGCTGGCAAAAATGGGT+GGG | + | chr3.1:73085871-73085890 | None:intergenic | 40.0% | |
| AATGCCAGAAGACTATGGAT+GGG | - | chr3.1:73084108-73084127 | MS.gene06954:CDS | 40.0% | |
| ACCTCATTCTTCAGAAATGC+AGG | + | chr3.1:73088174-73088193 | None:intergenic | 40.0% | |
| AGAAAAGTCACTGTACCAAG+AGG | - | chr3.1:73084873-73084892 | MS.gene06954:intron | 40.0% | |
| AGATTGAGATACAAGGGTTG+GGG | + | chr3.1:73086187-73086206 | None:intergenic | 40.0% | |
| ATGGAGAAGGATGAATATGG+GGG | - | chr3.1:73084603-73084622 | MS.gene06954:intron | 40.0% | |
| ATGGTTTCTCTACAAGTTCC+TGG | + | chr3.1:73087045-73087064 | None:intergenic | 40.0% | |
| ATTCCTTTCTTGGTATGCAG+TGG | - | chr3.1:73087855-73087874 | MS.gene06954:intron | 40.0% | |
| CAAAGTGAATCCTCTCAAGA+AGG | + | chr3.1:73087669-73087688 | None:intergenic | 40.0% | |
| CAAGTGTTCCAACATATCCA+AGG | - | chr3.1:73087209-73087228 | MS.gene06954:CDS | 40.0% | |
| CATGGAGAAGGATGAATATG+GGG | - | chr3.1:73084602-73084621 | MS.gene06954:intron | 40.0% | |
| CGGTGGAGTTCTTTGTAATA+TGG | - | chr3.1:73087096-73087115 | MS.gene06954:intron | 40.0% | |
| CGTTGCATTAGTGTGCTTAA+AGG | - | chr3.1:73087622-73087641 | MS.gene06954:intron | 40.0% | |
| CTGTTCCAAAATGCCAAACT+AGG | + | chr3.1:73087737-73087756 | None:intergenic | 40.0% | |
| GCATTCCAAACCTCTTTCTA+CGG | + | chr3.1:73084093-73084112 | None:intergenic | 40.0% | |
| GGGAAAGTTCTTGTACTTGA+TGG | - | chr3.1:73085004-73085023 | MS.gene06954:intron | 40.0% | |
| GGGTTCACAAAATCAACATG+CGG | + | chr3.1:73087915-73087934 | None:intergenic | 40.0% | |
| GTAAGATCTTTCTTGCATGC+AGG | + | chr3.1:73088109-73088128 | None:intergenic | 40.0% | |
| GTGGGATCAACTTTATCATG+AGG | + | chr3.1:73087389-73087408 | None:intergenic | 40.0% | |
| GTTTCTTCTATGCTCAACAG+AGG | - | chr3.1:73087887-73087906 | MS.gene06954:CDS | 40.0% | |
| TGCAACGTGACAAACCAAAA+AGG | + | chr3.1:73087609-73087628 | None:intergenic | 40.0% | |
| TGGTTTCTCTACAAGTTCCT+GGG | + | chr3.1:73087044-73087063 | None:intergenic | 40.0% | |
| TTCTTAAACGTGCACCTGAA+GGG | - | chr3.1:73085895-73085914 | MS.gene06954:intron | 40.0% | |
| TTCTTCTATGCTCAACAGAG+GGG | - | chr3.1:73087889-73087908 | MS.gene06954:CDS | 40.0% | |
| TTGAAGGAGTTTGAAAGAGG+AGG | - | chr3.1:73086504-73086523 | MS.gene06954:intron | 40.0% | |
| TTGTCACTCTACCGTTGTTT+CGG | - | chr3.1:73084217-73084236 | MS.gene06954:intron | 40.0% | |
| TTTCTTAAACGTGCACCTGA+AGG | - | chr3.1:73085894-73085913 | MS.gene06954:intron | 40.0% | |
| ! | ACTTGCCTAGTTTGGCATTT+TGG | - | chr3.1:73087729-73087748 | MS.gene06954:intron | 40.0% |
| ! | CATTTCTGAAGAATGAGGTG+AGG | - | chr3.1:73088175-73088194 | MS.gene06954:CDS | 40.0% |
| ! | CTTGGTACAGTGACTTTTCT+TGG | + | chr3.1:73084873-73084892 | None:intergenic | 40.0% |
| ! | GATAAAGTTGATCCCACTGA+TGG | - | chr3.1:73087392-73087411 | MS.gene06954:CDS | 40.0% |
| ! | TAACAGGAATGGTTTGGAGA+AGG | - | chr3.1:73084139-73084158 | MS.gene06954:intron | 40.0% |
| ! | TGGAGAGCATGTCTTGAATA+AGG | + | chr3.1:73087147-73087166 | None:intergenic | 40.0% |
| ! | TTTGGAATGCCAGAAGACTA+TGG | - | chr3.1:73084103-73084122 | MS.gene06954:CDS | 40.0% |
| !! | ATAAGCATCGGAGGAATCTT+AGG | - | chr3.1:73087967-73087986 | MS.gene06954:intron | 40.0% |
| !! | CATATTGTTTTGTTGGCTGC+TGG | - | chr3.1:73086763-73086782 | MS.gene06954:CDS | 40.0% |
| !! | GACTTTACATTTTTGGGGGA+CGG | + | chr3.1:73085103-73085122 | None:intergenic | 40.0% |
| !! | TAGAAGGTGCTGATAAGCAT+CGG | - | chr3.1:73087955-73087974 | MS.gene06954:intron | 40.0% |
| !!! | AGGTCTTGGTTTTTGAGGTA+TGG | - | chr3.1:73084893-73084912 | MS.gene06954:intron | 40.0% |
| !!! | GGCATTTTGGAACAGTATAG+GGG | - | chr3.1:73087742-73087761 | MS.gene06954:intron | 40.0% |
| ACACCACTGCATACCAAGAA+AGG | + | chr3.1:73087861-73087880 | None:intergenic | 45.0% | |
| AGAAGGATGAATATGGGGGT+GGG | - | chr3.1:73084607-73084626 | MS.gene06954:intron | 45.0% | |
| CAATAGCTGGCAAAAATGGG+TGG | + | chr3.1:73085872-73085891 | None:intergenic | 45.0% | |
| CCTCAAAAACCAAGACCTCT+TGG | + | chr3.1:73084891-73084910 | None:intergenic | 45.0% | |
| CGTGACAAACCAAAAAGGCT+AGG | + | chr3.1:73087604-73087623 | None:intergenic | 45.0% | |
| GAATGCCAGAAGACTATGGA+TGG | - | chr3.1:73084107-73084126 | MS.gene06954:CDS | 45.0% | |
| GGAAAATCGGAGCAAAACGA+AGG | + | chr3.1:73086857-73086876 | None:intergenic | 45.0% | |
| GTGTATATGACGGTTGCTGA+TGG | - | chr3.1:73084787-73084806 | MS.gene06954:intron | 45.0% | |
| GTGTGCTTAAAGGTTGTGGT+AGG | - | chr3.1:73087632-73087651 | MS.gene06954:intron | 45.0% | |
| GTTTAGTAACTGTCAGGGCA+CGG | + | chr3.1:73087779-73087798 | None:intergenic | 45.0% | |
| TCAAACCCAACAGCTAACTG+TGG | + | chr3.1:73085703-73085722 | None:intergenic | 45.0% | |
| TGGGCAAATGTTAGCAGTGT+TGG | + | chr3.1:73086561-73086580 | None:intergenic | 45.0% | |
| TGGTATGCAGTGGTGTGATA+GGG | - | chr3.1:73087865-73087884 | MS.gene06954:intron | 45.0% | |
| TTGATACAACCGAGCCTTCA+TGG | - | chr3.1:73084584-73084603 | MS.gene06954:intron | 45.0% | |
| TTGGTATGCAGTGGTGTGAT+AGG | - | chr3.1:73087864-73087883 | MS.gene06954:intron | 45.0% | |
| TTGTAATTTAGGTCCTGCCC+AGG | - | chr3.1:73087024-73087043 | MS.gene06954:intron | 45.0% | |
| ! | ATGACGGTTGCTGATGGTTT+TGG | - | chr3.1:73084793-73084812 | MS.gene06954:intron | 45.0% |
| ! | GATTATGGTTGGTGTGTTGC+TGG | - | chr3.1:73087448-73087467 | MS.gene06954:intron | 45.0% |
| ! | GCCTGCATTTCTGAAGAATG+AGG | - | chr3.1:73088170-73088189 | MS.gene06954:CDS | 45.0% |
| ! | GTACACTTGCATGTTGGTGA+TGG | - | chr3.1:73085733-73085752 | MS.gene06954:intron | 45.0% |
| ! | GTTGATTCCTCAGATCCTGT+GGG | - | chr3.1:73085936-73085955 | MS.gene06954:intron | 45.0% |
| ! | TCAGCATCTCAAACTTGCTC+TGG | - | chr3.1:73084248-73084267 | MS.gene06954:intron | 45.0% |
| ! | TGTCACTCTACCGTTGTTTC+GGG | - | chr3.1:73084218-73084237 | MS.gene06954:intron | 45.0% |
| !! | CCAAGAGGTCTTGGTTTTTG+AGG | - | chr3.1:73084888-73084907 | MS.gene06954:intron | 45.0% |
| !! | GCAGTTGATCCTAGCCTTTT+TGG | - | chr3.1:73087592-73087611 | MS.gene06954:intron | 45.0% |
| !! | TACATTTTTGGGGGACGGAA+TGG | + | chr3.1:73085098-73085117 | None:intergenic | 45.0% |
| !! | TGTTGATTCCTCAGATCCTG+TGG | - | chr3.1:73085935-73085954 | MS.gene06954:intron | 45.0% |
| !! | TTAGTTGTTGGTGGTGGAGA+TGG | - | chr3.1:73085508-73085527 | MS.gene06954:intron | 45.0% |
| !!! | CAGGTTTTAGTTGTTGGTGG+TGG | - | chr3.1:73085502-73085521 | MS.gene06954:intron | 45.0% |
| !! | TATAAAAAAGTTAAAAATTT+AGG | - | chr3.1:73087570-73087589 | MS.gene06954:intron | 5.0% |
| AACAGTCACCTGGCCACATT+GGG | + | chr3.1:73084410-73084429 | None:intergenic | 50.0% | |
| AAGGATGAATATGGGGGTGG+GGG | - | chr3.1:73084609-73084628 | MS.gene06954:intron | 50.0% | |
| AGCAGACGGTGGAAACAGTA+TGG | + | chr3.1:73085459-73085478 | None:intergenic | 50.0% | |
| CAATATGCTCCACAGAGCTG+TGG | + | chr3.1:73085558-73085577 | None:intergenic | 50.0% | |
| CATCCTTCTCCATGAAGGCT+CGG | + | chr3.1:73084596-73084615 | None:intergenic | 50.0% | |
| CCAACATGCAAGTGTACACG+AGG | + | chr3.1:73085730-73085749 | None:intergenic | 50.0% | |
| CCAGAAGACTATGGATGGGA+AGG | - | chr3.1:73084112-73084131 | MS.gene06954:CDS | 50.0% | |
| CCTCGTGTACACTTGCATGT+TGG | - | chr3.1:73085727-73085746 | MS.gene06954:intron | 50.0% | |
| CCTTCCCATCCATAGTCTTC+TGG | + | chr3.1:73084115-73084134 | None:intergenic | 50.0% | |
| GAAGGATGAATATGGGGGTG+GGG | - | chr3.1:73084608-73084627 | MS.gene06954:intron | 50.0% | |
| GAGAAGGATGAATATGGGGG+TGG | - | chr3.1:73084606-73084625 | MS.gene06954:intron | 50.0% | |
| GCAGACGGTGGAAACAGTAT+GGG | + | chr3.1:73085458-73085477 | None:intergenic | 50.0% | |
| GGAGATGAGCTATCATCTCC+TGG | + | chr3.1:73085066-73085085 | None:intergenic | 50.0% | |
| GGCGAGTAACAGGAATGGTT+TGG | - | chr3.1:73084133-73084152 | MS.gene06954:intron | 50.0% | |
| GTCACTGTACCAAGAGGTCT+TGG | - | chr3.1:73084879-73084898 | MS.gene06954:intron | 50.0% | |
| TAACAGTCACCTGGCCACAT+TGG | + | chr3.1:73084411-73084430 | None:intergenic | 50.0% | |
| TGAGAACCACCCCGAAACAA+CGG | + | chr3.1:73084231-73084250 | None:intergenic | 50.0% | |
| TTAAACGTGCACCTGAAGGG+AGG | - | chr3.1:73085898-73085917 | MS.gene06954:intron | 50.0% | |
| TTACTCACCCACAGGATCTG+AGG | + | chr3.1:73085946-73085965 | None:intergenic | 50.0% | |
| TTCAACAACCCAATGTGGCC+AGG | - | chr3.1:73084399-73084418 | MS.gene06954:intron | 50.0% | |
| TTCTCTACAAGTTCCTGGGC+AGG | + | chr3.1:73087040-73087059 | None:intergenic | 50.0% | |
| ! | ACAATTGGCCTCCAACTCAG+GGG | + | chr3.1:73084201-73084220 | None:intergenic | 50.0% |
| ! | GACAATTGGCCTCCAACTCA+GGG | + | chr3.1:73084202-73084221 | None:intergenic | 50.0% |
| ! | GTCACTCTACCGTTGTTTCG+GGG | - | chr3.1:73084219-73084238 | MS.gene06954:intron | 50.0% |
| ! | TCTAAGGCATTAAGACCCGG+TGG | - | chr3.1:73087079-73087098 | MS.gene06954:intron | 50.0% |
| ! | TGACAATTGGCCTCCAACTC+AGG | + | chr3.1:73084203-73084222 | None:intergenic | 50.0% |
| !! | AAGGTGCTGATAAGCATCGG+AGG | - | chr3.1:73087958-73087977 | MS.gene06954:intron | 50.0% |
| !! | TGGAGATGGTGGGGTTCTAA+GGG | - | chr3.1:73085522-73085541 | MS.gene06954:intron | 50.0% |
| !! | TTGTTGGTGGTGGAGATGGT+GGG | - | chr3.1:73085512-73085531 | MS.gene06954:intron | 50.0% |
| ATGAATATGGGGGTGGGGGA+AGG | - | chr3.1:73084613-73084632 | MS.gene06954:intron | 55.0% | |
| CAACCGAGCCTTCATGGAGA+AGG | - | chr3.1:73084590-73084609 | MS.gene06954:intron | 55.0% | |
| GGACGCCGTAGAAAGAGGTT+TGG | - | chr3.1:73084085-73084104 | MS.gene06954:CDS | 55.0% | |
| GGGAAGGCGAGTAACAGGAA+TGG | - | chr3.1:73084128-73084147 | MS.gene06954:intron | 55.0% | |
| GTGAGGTTGCTCCGTCAGTA+GGG | - | chr3.1:73088192-73088211 | MS.gene06954:CDS | 55.0% | |
| TATGCTCCACAGAGCTGTGG+CGG | + | chr3.1:73085555-73085574 | None:intergenic | 55.0% | |
| TGGATGGGAAGGCGAGTAAC+AGG | - | chr3.1:73084123-73084142 | MS.gene06954:CDS | 55.0% | |
| ! | ACTCTACCGTTGTTTCGGGG+TGG | - | chr3.1:73084222-73084241 | MS.gene06954:intron | 55.0% |
| !! | GTGGAGATGGTGGGGTTCTA+AGG | - | chr3.1:73085521-73085540 | MS.gene06954:intron | 55.0% |
| !! | GTTGTTGGTGGTGGAGATGG+TGG | - | chr3.1:73085511-73085530 | MS.gene06954:intron | 55.0% |
| !! | TGTTGGTGGTGGAGATGGTG+GGG | - | chr3.1:73085513-73085532 | MS.gene06954:intron | 55.0% |
| ACGGCGTCATACCTCCCTTC+AGG | + | chr3.1:73085912-73085931 | None:intergenic | 60.0% | |
| AGTATCCCGCCACAGCTCTG+TGG | - | chr3.1:73085546-73085565 | MS.gene06954:intron | 60.0% | |
| ATGCTCCACAGAGCTGTGGC+GGG | + | chr3.1:73085554-73085573 | None:intergenic | 60.0% | |
| ATGGGGGACGCCGTAGAAAG+AGG | - | chr3.1:73084080-73084099 | MS.gene06954:CDS | 60.0% | |
| CAACTCAGGGGCTGAAGCCA+TGG | + | chr3.1:73084189-73084208 | None:intergenic | 60.0% | |
| CATGGCTTCAGCCCCTGAGT+TGG | - | chr3.1:73084187-73084206 | MS.gene06954:intron | 60.0% | |
| GGGACGGAATGGAACAGAGG+GGG | + | chr3.1:73085087-73085106 | None:intergenic | 60.0% | |
| GGGGACGGAATGGAACAGAG+GGG | + | chr3.1:73085088-73085107 | None:intergenic | 60.0% | |
| GGGGGACGGAATGGAACAGA+GGG | + | chr3.1:73085089-73085108 | None:intergenic | 60.0% | |
| GGTGAGGTTGCTCCGTCAGT+AGG | - | chr3.1:73088191-73088210 | MS.gene06954:CDS | 60.0% | |
| TGGGGGACGGAATGGAACAG+AGG | + | chr3.1:73085090-73085109 | None:intergenic | 60.0% | |
| ! | GGCTTCAGCCCCTGAGTTGG+AGG | - | chr3.1:73084190-73084209 | MS.gene06954:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 73084080 | 73088212 | 73084080 | ID=MS.gene06954 |
| chr3.1 | mRNA | 73084080 | 73088212 | 73084080 | ID=MS.gene06954.t1;Parent=MS.gene06954 |
| chr3.1 | exon | 73088023 | 73088212 | 73088023 | ID=MS.gene06954.t1.exon1;Parent=MS.gene06954.t1 |
| chr3.1 | CDS | 73088023 | 73088212 | 73088023 | ID=cds.MS.gene06954.t1;Parent=MS.gene06954.t1 |
| chr3.1 | exon | 73087872 | 73087916 | 73087872 | ID=MS.gene06954.t1.exon2;Parent=MS.gene06954.t1 |
| chr3.1 | CDS | 73087872 | 73087916 | 73087872 | ID=cds.MS.gene06954.t1;Parent=MS.gene06954.t1 |
| chr3.1 | exon | 73087383 | 73087459 | 73087383 | ID=MS.gene06954.t1.exon3;Parent=MS.gene06954.t1 |
| chr3.1 | CDS | 73087383 | 73087459 | 73087383 | ID=cds.MS.gene06954.t1;Parent=MS.gene06954.t1 |
| chr3.1 | exon | 73087178 | 73087300 | 73087178 | ID=MS.gene06954.t1.exon4;Parent=MS.gene06954.t1 |
| chr3.1 | CDS | 73087178 | 73087300 | 73087178 | ID=cds.MS.gene06954.t1;Parent=MS.gene06954.t1 |
| chr3.1 | exon | 73086683 | 73086787 | 73086683 | ID=MS.gene06954.t1.exon5;Parent=MS.gene06954.t1 |
| chr3.1 | CDS | 73086683 | 73086787 | 73086683 | ID=cds.MS.gene06954.t1;Parent=MS.gene06954.t1 |
| chr3.1 | exon | 73086538 | 73086610 | 73086538 | ID=MS.gene06954.t1.exon6;Parent=MS.gene06954.t1 |
| chr3.1 | CDS | 73086538 | 73086610 | 73086538 | ID=cds.MS.gene06954.t1;Parent=MS.gene06954.t1 |
| chr3.1 | exon | 73086335 | 73086406 | 73086335 | ID=MS.gene06954.t1.exon7;Parent=MS.gene06954.t1 |
| chr3.1 | CDS | 73086335 | 73086406 | 73086335 | ID=cds.MS.gene06954.t1;Parent=MS.gene06954.t1 |
| chr3.1 | exon | 73085062 | 73085257 | 73085062 | ID=MS.gene06954.t1.exon8;Parent=MS.gene06954.t1 |
| chr3.1 | CDS | 73085062 | 73085257 | 73085062 | ID=cds.MS.gene06954.t1;Parent=MS.gene06954.t1 |
| chr3.1 | exon | 73084288 | 73084417 | 73084288 | ID=MS.gene06954.t1.exon9;Parent=MS.gene06954.t1 |
| chr3.1 | CDS | 73084288 | 73084417 | 73084288 | ID=cds.MS.gene06954.t1;Parent=MS.gene06954.t1 |
| chr3.1 | exon | 73084080 | 73084145 | 73084080 | ID=MS.gene06954.t1.exon10;Parent=MS.gene06954.t1 |
| chr3.1 | CDS | 73084080 | 73084145 | 73084080 | ID=cds.MS.gene06954.t1;Parent=MS.gene06954.t1 |
| Gene Sequence |
| Protein sequence |
