Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069880.t1 | XP_003597674.1 | 96.5 | 1140 | 40 | 0 | 1 | 1140 | 1 | 1140 | 0.00E+00 | 2128.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069880.t1 | Q0WVF8 | 45.6 | 1153 | 591 | 11 | 1 | 1138 | 2 | 1133 | 1.0e-271 | 937.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069880.t1 | G7IHZ6 | 96.5 | 1140 | 40 | 0 | 1 | 1140 | 1 | 1140 | 0.0e+00 | 2128.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049207 | MS.gene069880 | 0.838743 | 2.40E-57 | -1.69E-46 |
| MS.gene049824 | MS.gene069880 | 0.849448 | 3.21E-60 | -1.69E-46 |
| MS.gene049825 | MS.gene069880 | 0.82188 | 3.19E-53 | -1.69E-46 |
| MS.gene049873 | MS.gene069880 | 0.806938 | 6.45E-50 | -1.69E-46 |
| MS.gene050427 | MS.gene069880 | 0.81435 | 1.61E-51 | -1.69E-46 |
| MS.gene050885 | MS.gene069880 | 0.804728 | 1.88E-49 | -1.69E-46 |
| MS.gene055166 | MS.gene069880 | 0.806435 | 8.24E-50 | -1.69E-46 |
| MS.gene055808 | MS.gene069880 | 0.819455 | 1.15E-52 | -1.69E-46 |
| MS.gene056403 | MS.gene069880 | 0.800256 | 1.57E-48 | -1.69E-46 |
| MS.gene05954 | MS.gene069880 | 0.813538 | 2.43E-51 | -1.69E-46 |
| MS.gene059935 | MS.gene069880 | 0.801323 | 9.51E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene35361 | MS.gene069880 | PPI |
| MS.gene069880 | MS.gene91488 | PPI |
| MS.gene073095 | MS.gene069880 | PPI |
| MS.gene94650 | MS.gene069880 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069880.t1 | MTR_2g100870 | 96.491 | 1140 | 40 | 0 | 1 | 1140 | 1 | 1140 | 0.0 | 2258 |
| MS.gene069880.t1 | MTR_5g085950 | 86.053 | 1140 | 158 | 1 | 1 | 1140 | 1 | 1139 | 0.0 | 1943 |
| MS.gene069880.t1 | MTR_5g055460 | 83.333 | 48 | 8 | 0 | 175 | 222 | 17 | 64 | 1.46e-19 | 85.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene069880.t1 | AT5G48120 | 45.533 | 1153 | 592 | 11 | 1 | 1138 | 2 | 1133 | 0.0 | 948 |
| MS.gene069880.t1 | AT5G48120 | 45.533 | 1153 | 592 | 11 | 1 | 1138 | 2 | 1133 | 0.0 | 948 |
| MS.gene069880.t1 | AT5G48120 | 45.533 | 1153 | 592 | 11 | 1 | 1138 | 2 | 1133 | 0.0 | 948 |
Find 208 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTAAGAATGATGGATAAAT+TGG | 0.076592 | 2.1:-4048304 | MS.gene069880:CDS |
| AGACACTTTATATACTTATT+TGG | 0.080986 | 2.1:-4048628 | MS.gene069880:CDS |
| TGCAGAAGCCCTCTTATATT+TGG | 0.180661 | 2.1:+4045881 | None:intergenic |
| ATATTCTCAAATGTTGATTT+TGG | 0.185446 | 2.1:+4047196 | None:intergenic |
| TGCAATTTGCTGTGGATATT+TGG | 0.195724 | 2.1:-4046327 | MS.gene069880:CDS |
| CATGAGACGTTAAATTTCTT+TGG | 0.197723 | 2.1:+4046633 | None:intergenic |
| TCAATTATCATAGAAGATTT+TGG | 0.200733 | 2.1:-4047157 | MS.gene069880:CDS |
| TGAAACTGCTGTTCAGCTTT+TGG | 0.210397 | 2.1:-4046612 | MS.gene069880:CDS |
| GACACTTTATATACTTATTT+GGG | 0.214061 | 2.1:-4048627 | MS.gene069880:CDS |
| TCAACTACAACTTCGTTCTT+TGG | 0.238088 | 2.1:+4048555 | None:intergenic |
| CTTGCAAAATGGCGGTATTT+TGG | 0.239622 | 2.1:-4048256 | MS.gene069880:CDS |
| GCTTCTACTTTGAGTGAAAA+AGG | 0.246531 | 2.1:+4046983 | None:intergenic |
| TATACTGAATGAAGCTAAAA+AGG | 0.249796 | 2.1:-4044874 | MS.gene069880:intron |
| CAAAATATACTGGGGCTATT+TGG | 0.258873 | 2.1:-4048662 | MS.gene069880:CDS |
| TATATTTGGAATGTGTGTTT+TGG | 0.263185 | 2.1:+4045895 | None:intergenic |
| TTATATTCAACACAAAATTA+TGG | 0.275586 | 2.1:-4045724 | MS.gene069880:CDS |
| TGTTCCAGTTGCACAGGCTT+TGG | 0.282641 | 2.1:-4045828 | MS.gene069880:CDS |
| GCTGTCTTATTTAATGCCTT+TGG | 0.286607 | 2.1:-4048108 | MS.gene069880:CDS |
| TACACAGACCTCGGATAAAT+TGG | 0.288390 | 2.1:+4046886 | None:intergenic |
| GTTCCAGTTGCACAGGCTTT+GGG | 0.289048 | 2.1:-4045827 | MS.gene069880:CDS |
| CACTTGCAGGTTCAATCTTT+AGG | 0.305593 | 2.1:-4052080 | MS.gene069880:CDS |
| GCAGCTCATACCAGTTCTTC+TGG | 0.317367 | 2.1:-4044751 | MS.gene069880:intron |
| AAAGCAAGCATTAAACATTC+TGG | 0.318254 | 2.1:+4050638 | None:intergenic |
| TTGAAAGCATTATTTCATAT+TGG | 0.321286 | 2.1:-4047109 | MS.gene069880:CDS |
| AACATTGATGGCTTGCAAAA+TGG | 0.325223 | 2.1:-4048267 | MS.gene069880:CDS |
| GATTCTCTCTGCTCCATACT+TGG | 0.328652 | 2.1:+4048686 | None:intergenic |
| GCCTCACAAAGTGTTAATTT+CGG | 0.341373 | 2.1:-4048234 | MS.gene069880:CDS |
| GAGCCCAAAGCCTGTGCAAC+TGG | 0.345968 | 2.1:+4045824 | None:intergenic |
| TTCTTCAGGAATTCTTCTTC+TGG | 0.346745 | 2.1:-4052826 | MS.gene069880:intron |
| TGCCGATTCAATTGCCTCAT+TGG | 0.354326 | 2.1:-4051636 | MS.gene069880:intron |
| GAGAGAATCACAAAATATAC+TGG | 0.360014 | 2.1:-4048672 | MS.gene069880:CDS |
| CATACAAGATATCTTTATCT+TGG | 0.362497 | 2.1:+4044700 | None:intergenic |
| AAAAGTACCCCTTCATCCTT+AGG | 0.362568 | 2.1:+4045950 | None:intergenic |
| GTTGCAAGCTTGGATGCAAT+TGG | 0.372632 | 2.1:-4053695 | MS.gene069880:CDS |
| TCACCTCCAATGTATATATC+AGG | 0.379956 | 2.1:+4048045 | None:intergenic |
| ACTTCCGTGCCTTTAGTTGA+AGG | 0.385121 | 2.1:-4045479 | MS.gene069880:CDS |
| ATGGGCAGGATCCTTGAAAA+TGG | 0.386884 | 2.1:-4046370 | MS.gene069880:intron |
| ATCTTTATCTTGGATATCTT+CGG | 0.387694 | 2.1:+4044710 | None:intergenic |
| AAAAGATTGAGTAATGGATT+TGG | 0.388568 | 2.1:+4052109 | None:intergenic |
| ATGCCATTTGTGGGCTCTCA+TGG | 0.397432 | 2.1:-4045592 | MS.gene069880:CDS |
| AGAGTGTGCTCCTCCAAGTA+TGG | 0.397798 | 2.1:-4048699 | MS.gene069880:CDS |
| GGAAGATTGACATTAACTTC+TGG | 0.399199 | 2.1:-4045989 | MS.gene069880:CDS |
| GTAGTTCTATACAGAGATAA+AGG | 0.401655 | 2.1:+4048208 | None:intergenic |
| TCTAATAATATGTTACAGAT+AGG | 0.403816 | 2.1:-4045695 | MS.gene069880:CDS |
| CTTCAAACCAATGCCATTTG+TGG | 0.407593 | 2.1:-4045602 | MS.gene069880:CDS |
| AGGTGCGCTCGTTGGTTGCT+TGG | 0.408972 | 2.1:-4052180 | MS.gene069880:CDS |
| TAATTCTCCATTTGAGGAAA+AGG | 0.410569 | 2.1:-4046278 | MS.gene069880:intron |
| AGTGTTGTGGGTACGGTAAC+GGG | 0.413671 | 2.1:-4052140 | MS.gene069880:CDS |
| GAAGTACTGACCATGCTTGC+CGG | 0.413682 | 2.1:+4043409 | None:intergenic |
| TTAAGAATGATGGATAAATT+GGG | 0.416904 | 2.1:-4048303 | MS.gene069880:CDS |
| GTTCTTACTGATTTATGTCT+CGG | 0.417407 | 2.1:-4045644 | MS.gene069880:CDS |
| AGCTGAGGAACTATGAAGTA+TGG | 0.418824 | 2.1:+4048128 | None:intergenic |
| ACTCTCAGGATGCAGGGAAT+TGG | 0.421940 | 2.1:-4048187 | MS.gene069880:CDS |
| TCAAGTGAGCCTTCAACTAA+AGG | 0.422165 | 2.1:+4045470 | None:intergenic |
| AATCCATGCAATTTCCTGCT+TGG | 0.428610 | 2.1:+4046302 | None:intergenic |
| AAGAAGAAAGTTTCTGAAGA+AGG | 0.429146 | 2.1:+4048890 | None:intergenic |
| ACACACATTCCAAATATAAG+AGG | 0.429195 | 2.1:-4045890 | MS.gene069880:CDS |
| GTAGAAGCATTATATGATAT+CGG | 0.429218 | 2.1:-4046968 | MS.gene069880:CDS |
| GCACAATAAGCTGCTGAAGC+AGG | 0.431485 | 2.1:+4048523 | None:intergenic |
| AAGTCTGATACCGTCTTATG+AGG | 0.431679 | 2.1:+4044146 | None:intergenic |
| GACAAGCAATCCAGAAGAAC+TGG | 0.432210 | 2.1:+4044741 | None:intergenic |
| TTGGTTGCTTGGCACTGATA+AGG | 0.433268 | 2.1:-4052169 | MS.gene069880:CDS |
| TAGCTTGGTTGGGTTCTTCA+AGG | 0.437441 | 2.1:-4052751 | MS.gene069880:CDS |
| TGTATTGCAGGTTGCAAGCT+TGG | 0.439105 | 2.1:-4053705 | MS.gene069880:intron |
| GATCTGATTCTTTATTGTCC+AGG | 0.441249 | 2.1:-4045268 | MS.gene069880:intron |
| TGGCATTCCATAGTACTGTT+TGG | 0.446947 | 2.1:+4047134 | None:intergenic |
| TTCAAACCAATGCCATTTGT+GGG | 0.447068 | 2.1:-4045601 | MS.gene069880:CDS |
| ATCAGACTTCTCTGCACCAT+TGG | 0.447336 | 2.1:+4045775 | None:intergenic |
| AGGAATTCTTCTTCTGGCAG+AGG | 0.451191 | 2.1:-4052820 | MS.gene069880:CDS |
| AAAACTATACATAGCTTGGT+TGG | 0.451872 | 2.1:-4052762 | MS.gene069880:CDS |
| GGGTGTTGTTCCAGTTGCAC+AGG | 0.458087 | 2.1:-4045834 | MS.gene069880:CDS |
| CACAGCATTGCAGGAAGGAA+TGG | 0.459401 | 2.1:+4048341 | None:intergenic |
| AATCTTTAGGACTGCATGAC+AGG | 0.461991 | 2.1:-4052067 | MS.gene069880:CDS |
| AAAGTACCCCTTCATCCTTA+GGG | 0.462262 | 2.1:+4045951 | None:intergenic |
| TAGGTAATGGATCAAGTAAT+GGG | 0.464527 | 2.1:-4045676 | MS.gene069880:CDS |
| CAAGATAAAGATATCTTGTA+TGG | 0.465086 | 2.1:-4044699 | MS.gene069880:CDS |
| CACTATTTCTGTGCAAGAAA+AGG | 0.466787 | 2.1:-4048412 | MS.gene069880:CDS |
| TGAGATCAATTGCAGAAAGA+TGG | 0.467104 | 2.1:+4045292 | None:intergenic |
| GCTAGAGTAAAAGAGAAATC+TGG | 0.469250 | 2.1:+4048600 | None:intergenic |
| CGATTATATCCTGATCCATC+TGG | 0.470202 | 2.1:-4050593 | MS.gene069880:CDS |
| TAGAACTACTCTCAGGATGC+AGG | 0.472025 | 2.1:-4048194 | MS.gene069880:CDS |
| GGGCTCTCATGGATTGGAAA+AGG | 0.473984 | 2.1:-4045581 | MS.gene069880:CDS |
| TGGGAGTGAACCTGGTGAGA+TGG | 0.474738 | 2.1:+4053787 | None:intergenic |
| AAGTTTCAGCTTAATGATGT+AGG | 0.474859 | 2.1:-4046010 | MS.gene069880:CDS |
| TTGCAAGCTTGGATGCAATT+GGG | 0.475056 | 2.1:-4053694 | MS.gene069880:CDS |
| AAGGAGAAACTACATGCTAT+TGG | 0.476172 | 2.1:-4048393 | MS.gene069880:CDS |
| CTTACATGTGTAAAGTGAAT+CGG | 0.477840 | 2.1:+4050518 | None:intergenic |
| ATTTGTGGGCTCTCATGGAT+TGG | 0.477974 | 2.1:-4045587 | MS.gene069880:CDS |
| TTATTTATAATCAGGCAGAT+TGG | 0.478009 | 2.1:-4052214 | MS.gene069880:intron |
| GCACACTCTAAGATATTGTA+AGG | 0.481622 | 2.1:+4048713 | None:intergenic |
| AAACTATACATAGCTTGGTT+GGG | 0.482444 | 2.1:-4052761 | MS.gene069880:CDS |
| GTAAAGTGAATCGGAAAGTA+AGG | 0.484365 | 2.1:+4050527 | None:intergenic |
| AATGCACATATTATCATCAA+TGG | 0.492111 | 2.1:-4044191 | MS.gene069880:CDS |
| TGGGTTCTTCAAGGAAAGAA+TGG | 0.495618 | 2.1:-4052742 | MS.gene069880:intron |
| AAAATTCAGCGAGTCTGAAA+AGG | 0.497418 | 2.1:-4047074 | MS.gene069880:CDS |
| GACATTTCCCCTAAGGATGA+AGG | 0.497426 | 2.1:-4045959 | MS.gene069880:CDS |
| CTCATAAGATGCAATGCTGT+TGG | 0.497867 | 2.1:+4048443 | None:intergenic |
| GAGGAAAAGTGTTGTGGGTA+CGG | 0.500931 | 2.1:-4052147 | MS.gene069880:CDS |
| AATATGTTACAGATAGGTAA+TGG | 0.501229 | 2.1:-4045689 | MS.gene069880:CDS |
| TACCAATGAGGCAATTGAAT+CGG | 0.502183 | 2.1:+4051634 | None:intergenic |
| TGAAATTTAGGTTAGAGAGT+TGG | 0.502230 | 2.1:-4053509 | MS.gene069880:intron |
| CACAATAAGCTGCTGAAGCA+GGG | 0.507341 | 2.1:+4048524 | None:intergenic |
| AAGTGTTGTGGGTACGGTAA+CGG | 0.511090 | 2.1:-4052141 | MS.gene069880:CDS |
| AGAGCAGAAATGTGATCCTC+TGG | 0.513326 | 2.1:-4045438 | MS.gene069880:CDS |
| GCAGGAAGGAATGGAAGTCT+TGG | 0.514261 | 2.1:+4048350 | None:intergenic |
| TCTCTCTGCTCCATACTTGG+AGG | 0.515380 | 2.1:+4048689 | None:intergenic |
| TGGAAAGTTAATACCATCTG+TGG | 0.516141 | 2.1:+4048575 | None:intergenic |
| GCAAGTAGACCAGATGGATC+AGG | 0.516624 | 2.1:+4050584 | None:intergenic |
| TTGCAGAAAGATGGGCATCA+TGG | 0.520421 | 2.1:+4045301 | None:intergenic |
| CTGTCAAATGCCGGCAAGCA+TGG | 0.520628 | 2.1:-4043419 | MS.gene069880:intron |
| CTCTTCAACTCCATCTCACC+AGG | 0.521795 | 2.1:-4053797 | MS.gene069880:intron |
| TCTGATCCTGATATATACAT+TGG | 0.522783 | 2.1:-4048051 | MS.gene069880:CDS |
| GAAAGTTTCTGAAGAAGGAG+AGG | 0.523072 | 2.1:+4048895 | None:intergenic |
| GCAGTACGAGGTGCGCTCGT+TGG | 0.524945 | 2.1:-4052188 | MS.gene069880:CDS |
| TGAGAGCCCACAAATGGCAT+TGG | 0.529030 | 2.1:+4045595 | None:intergenic |
| TACATCATTAAGCTGAAACT+TGG | 0.529117 | 2.1:+4046012 | None:intergenic |
| AGAAGGAGAGGAATGACAAA+TGG | 0.529592 | 2.1:+4048907 | None:intergenic |
| GAAGTCTGATGAACTTACCT+TGG | 0.531629 | 2.1:-4045762 | MS.gene069880:CDS |
| AATCCATGAGAGCCCACAAA+TGG | 0.532104 | 2.1:+4045589 | None:intergenic |
| GCTTACAATTCTTCAAGCGA+TGG | 0.534202 | 2.1:-4046924 | MS.gene069880:CDS |
| GAGATCAATTGCAGAAAGAT+GGG | 0.536252 | 2.1:+4045293 | None:intergenic |
| TTTAATAATAACCCTCCTCA+AGG | 0.537659 | 2.1:-4045855 | MS.gene069880:CDS |
| GGGCATCGATTGCCTCATCT+AGG | 0.541580 | 2.1:-4043298 | MS.gene069880:CDS |
| ATAGGTAATGGATCAAGTAA+TGG | 0.542296 | 2.1:-4045677 | MS.gene069880:CDS |
| AAAATATGACATTTCCCCTA+AGG | 0.543815 | 2.1:-4045966 | MS.gene069880:CDS |
| ACATTTCCCCTAAGGATGAA+GGG | 0.544414 | 2.1:-4045958 | MS.gene069880:CDS |
| CTCTGTATAGAACTACTCTC+AGG | 0.544666 | 2.1:-4048201 | MS.gene069880:CDS |
| GAACCAAGCAGGAAATTGCA+TGG | 0.546490 | 2.1:-4046305 | MS.gene069880:CDS |
| ATAAGGAGGAAAAGTGTTGT+GGG | 0.547829 | 2.1:-4052152 | MS.gene069880:CDS |
| GTACCATCAGAGTCCTTGAT+AGG | 0.548690 | 2.1:+4050149 | None:intergenic |
| GTGGATATTTGGAACCAAGC+AGG | 0.552500 | 2.1:-4046316 | MS.gene069880:CDS |
| GCAATGAAGCTGTCAAATGC+CGG | 0.553254 | 2.1:-4043428 | MS.gene069880:CDS |
| TGGAGGTGCAGAGGATTTCG+TGG | 0.554978 | 2.1:-4046350 | MS.gene069880:CDS |
| ATTCTTGCAAGCTACTTCCA+TGG | 0.557389 | 2.1:-4046583 | MS.gene069880:intron |
| GATCCTGATATATACATTGG+AGG | 0.557628 | 2.1:-4048048 | MS.gene069880:intron |
| TGCAACGAGATGACCTATCA+AGG | 0.557982 | 2.1:-4050162 | MS.gene069880:CDS |
| GATACAGTTATTCGATCAAG+AGG | 0.561676 | 2.1:-4053466 | MS.gene069880:intron |
| AATCGGCATGATGTTCTAGC+AGG | 0.561685 | 2.1:+4051651 | None:intergenic |
| TTCTTCACTACATTCAGCAA+AGG | 0.562396 | 2.1:-4048872 | MS.gene069880:intron |
| GAAAATTTCATGCCACAGTA+CGG | 0.562746 | 2.1:-4045352 | MS.gene069880:CDS |
| TTGTAGAAAAGATTGAGTAA+TGG | 0.565621 | 2.1:+4052103 | None:intergenic |
| GATAAGGAGGAAAAGTGTTG+TGG | 0.565850 | 2.1:-4052153 | MS.gene069880:CDS |
| ATGTATATATCAGGATCAGA+GGG | 0.568346 | 2.1:+4048054 | None:intergenic |
| TGCTTCTAGAGTTAAAGCAT+TGG | 0.570514 | 2.1:+4053658 | None:intergenic |
| AAAGCGATGAAAGTTTCTGT+TGG | 0.571764 | 2.1:-4046100 | MS.gene069880:CDS |
| ACAATTCTTCAAGCGATGGA+AGG | 0.572459 | 2.1:-4046920 | MS.gene069880:CDS |
| CTGGTGAGATGGAGTTGAAG+AGG | 0.576523 | 2.1:+4053798 | None:intergenic |
| CAGTAAAACTATACATAGCT+TGG | 0.576918 | 2.1:-4052766 | MS.gene069880:CDS |
| AATGTATATATCAGGATCAG+AGG | 0.579679 | 2.1:+4048053 | None:intergenic |
| TTCTTTACCAGCAAACCAGT+GGG | 0.580902 | 2.1:-4050195 | MS.gene069880:intron |
| TCCGAAATTAACACTTTGTG+AGG | 0.585080 | 2.1:+4048233 | None:intergenic |
| CAATGGTCTAACTAAGCTTG+TGG | 0.585599 | 2.1:-4044174 | MS.gene069880:CDS |
| GTGGCACATTTCCTTGCCAG+AGG | 0.587914 | 2.1:+4045422 | None:intergenic |
| AAGCGATGAAAGTTTCTGTT+GGG | 0.589357 | 2.1:-4046099 | MS.gene069880:CDS |
| TAGCTTGATAATTGATGATG+AGG | 0.592254 | 2.1:-4048481 | MS.gene069880:CDS |
| GGAATTGGTTATTCTGTCTG+AGG | 0.592338 | 2.1:-4048172 | MS.gene069880:CDS |
| AAGCTTGCAAGTAGACCAGA+TGG | 0.592834 | 2.1:+4050578 | None:intergenic |
| AATATCAAGAGCTTCTTCCA+AGG | 0.593516 | 2.1:+4045745 | None:intergenic |
| GTTGCTTGGCACTGATAAGG+AGG | 0.593536 | 2.1:-4052166 | MS.gene069880:CDS |
| TTTAGGACTGCATGACAGGA+AGG | 0.596853 | 2.1:-4052063 | MS.gene069880:intron |
| TATCTATCCGTTGAGAACAC+AGG | 0.597641 | 2.1:-4043687 | MS.gene069880:intron |
| AGAGAATCACAAAATATACT+GGG | 0.598522 | 2.1:-4048671 | MS.gene069880:CDS |
| CACACATTCCAAATATAAGA+GGG | 0.598820 | 2.1:-4045889 | MS.gene069880:CDS |
| TTAATAATAACCCTCCTCAA+GGG | 0.599027 | 2.1:-4045854 | MS.gene069880:CDS |
| TTTCGTGGTGCAATTTGCTG+TGG | 0.599331 | 2.1:-4046335 | MS.gene069880:CDS |
| TTTCTTTACCAGCAAACCAG+TGG | 0.603166 | 2.1:-4050196 | MS.gene069880:intron |
| TCATTCAGTATAACAATCAG+TGG | 0.604482 | 2.1:+4044885 | None:intergenic |
| TATATTTACCAATTTATCCG+AGG | 0.604801 | 2.1:-4046894 | MS.gene069880:intron |
| TTTACTCTAGCACCCACAGA+TGG | 0.604886 | 2.1:-4048588 | MS.gene069880:CDS |
| ACACTTTATATACTTATTTG+GGG | 0.607680 | 2.1:-4048626 | MS.gene069880:CDS |
| AGAACTACTCTCAGGATGCA+GGG | 0.611678 | 2.1:-4048193 | MS.gene069880:CDS |
| GGAAAAGGTTTGCTGTTGCG+TGG | 0.612022 | 2.1:-4045566 | MS.gene069880:CDS |
| CTGGAACAACACCCTTGAGG+AGG | 0.612104 | 2.1:+4045843 | None:intergenic |
| TACAGCTAAGACTGAACCAA+AGG | 0.615923 | 2.1:+4048092 | None:intergenic |
| AGAAATGTGATCCTCTGGCA+AGG | 0.616514 | 2.1:-4045433 | MS.gene069880:CDS |
| CCTTGAAAATGGAGGTGCAG+AGG | 0.618663 | 2.1:-4046359 | MS.gene069880:CDS |
| AGTCTGATACCGTCTTATGA+GGG | 0.618808 | 2.1:+4044147 | None:intergenic |
| TGACCTATCAAGGACTCTGA+TGG | 0.620654 | 2.1:-4050152 | MS.gene069880:intron |
| GGAAAGTTAATACCATCTGT+GGG | 0.621048 | 2.1:+4048576 | None:intergenic |
| AAACTCACTTCGAAATCCAA+TGG | 0.626907 | 2.1:-4045791 | MS.gene069880:CDS |
| CATTTCCCCTAAGGATGAAG+GGG | 0.630449 | 2.1:-4045957 | MS.gene069880:CDS |
| CACTTTATATACTTATTTGG+GGG | 0.631526 | 2.1:-4048625 | MS.gene069880:CDS |
| TGAAACACAGCATTGCAGGA+AGG | 0.632076 | 2.1:+4048336 | None:intergenic |
| TGACAAACCTGTGTTCTCAA+CGG | 0.634669 | 2.1:+4043680 | None:intergenic |
| AAGTACCCCTTCATCCTTAG+GGG | 0.634965 | 2.1:+4045952 | None:intergenic |
| GTCAGACATGACATGTGCAA+AGG | 0.638569 | 2.1:+4044911 | None:intergenic |
| TGAGCCTTCAACTAAAGGCA+CGG | 0.639359 | 2.1:+4045475 | None:intergenic |
| TGGAACAACACCCTTGAGGA+GGG | 0.639744 | 2.1:+4045844 | None:intergenic |
| GGCATTAAATAAGACAGCTG+AGG | 0.645320 | 2.1:+4048113 | None:intergenic |
| TTGCACATGAGTATCCCCAC+TGG | 0.650398 | 2.1:+4050180 | None:intergenic |
| CTTATATAGAGGCCGTACTG+TGG | 0.653810 | 2.1:+4045340 | None:intergenic |
| AAGAACATGAAAAGCTTCCG+TGG | 0.653843 | 2.1:+4045403 | None:intergenic |
| ATGAAATAATGCTTTCAATG+TGG | 0.654390 | 2.1:+4047114 | None:intergenic |
| AACGGATAGATACGCACATG+AGG | 0.657874 | 2.1:+4043698 | None:intergenic |
| TACGGCCTCTATATAAGCAG+AGG | 0.658188 | 2.1:-4045334 | MS.gene069880:CDS |
| GGCAGGATCCTTGAAAATGG+AGG | 0.660852 | 2.1:-4046367 | MS.gene069880:intron |
| TCTGGCAAGGAAATGTGCCA+CGG | 0.665729 | 2.1:-4045420 | MS.gene069880:CDS |
| TGTGGACTACCCTCATAAGA+CGG | 0.673290 | 2.1:-4044156 | MS.gene069880:intron |
| ATTGATGGCTTGCAAAATGG+CGG | 0.675116 | 2.1:-4048264 | MS.gene069880:CDS |
| CAACTGGAACAACACCCTTG+AGG | 0.676901 | 2.1:+4045840 | None:intergenic |
| GAAACGAAGACTCCTAGATG+AGG | 0.685715 | 2.1:+4043286 | None:intergenic |
| AATGTGACGAGTCAATTGAG+TGG | 0.686701 | 2.1:+4053837 | None:intergenic |
| GGAAGTAAGGACTACCAATG+AGG | 0.689143 | 2.1:+4051622 | None:intergenic |
| GAGAATCACAAAATATACTG+GGG | 0.699475 | 2.1:-4048670 | MS.gene069880:CDS |
| GCAGATTGGAAAGCAGTACG+AGG | 0.712571 | 2.1:-4052200 | MS.gene069880:CDS |
| TCTTTACCAGCAAACCAGTG+GGG | 0.721811 | 2.1:-4050194 | MS.gene069880:intron |
| AGTTGAAGAGGAGTCAACGT+AGG | 0.742240 | 2.1:+4053810 | None:intergenic |
| TGTATATATCAGGATCAGAG+GGG | 0.758584 | 2.1:+4048055 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 4043283 | 4053869 | 4043283 | ID=MS.gene069880 |
| chr2.1 | mRNA | 4043283 | 4053869 | 4043283 | ID=MS.gene069880.t1;Parent=MS.gene069880 |
| chr2.1 | exon | 4053798 | 4053869 | 4053798 | ID=MS.gene069880.t1.exon1;Parent=MS.gene069880.t1 |
| chr2.1 | CDS | 4053798 | 4053869 | 4053798 | ID=cds.MS.gene069880.t1;Parent=MS.gene069880.t1 |
| chr2.1 | exon | 4053655 | 4053717 | 4053655 | ID=MS.gene069880.t1.exon2;Parent=MS.gene069880.t1 |
| chr2.1 | CDS | 4053655 | 4053717 | 4053655 | ID=cds.MS.gene069880.t1;Parent=MS.gene069880.t1 |
| chr2.1 | exon | 4053467 | 4053521 | 4053467 | ID=MS.gene069880.t1.exon3;Parent=MS.gene069880.t1 |
| chr2.1 | CDS | 4053467 | 4053521 | 4053467 | ID=cds.MS.gene069880.t1;Parent=MS.gene069880.t1 |
| chr2.1 | exon | 4052743 | 4052840 | 4052743 | ID=MS.gene069880.t1.exon4;Parent=MS.gene069880.t1 |
| chr2.1 | CDS | 4052743 | 4052840 | 4052743 | ID=cds.MS.gene069880.t1;Parent=MS.gene069880.t1 |
| chr2.1 | exon | 4052064 | 4052222 | 4052064 | ID=MS.gene069880.t1.exon5;Parent=MS.gene069880.t1 |
| chr2.1 | CDS | 4052064 | 4052222 | 4052064 | ID=cds.MS.gene069880.t1;Parent=MS.gene069880.t1 |
| chr2.1 | exon | 4051637 | 4051696 | 4051637 | ID=MS.gene069880.t1.exon6;Parent=MS.gene069880.t1 |
| chr2.1 | CDS | 4051637 | 4051696 | 4051637 | ID=cds.MS.gene069880.t1;Parent=MS.gene069880.t1 |
| chr2.1 | exon | 4050523 | 4050711 | 4050523 | ID=MS.gene069880.t1.exon7;Parent=MS.gene069880.t1 |
| chr2.1 | CDS | 4050523 | 4050711 | 4050523 | ID=cds.MS.gene069880.t1;Parent=MS.gene069880.t1 |
| chr2.1 | exon | 4050153 | 4050206 | 4050153 | ID=MS.gene069880.t1.exon8;Parent=MS.gene069880.t1 |
| chr2.1 | CDS | 4050153 | 4050206 | 4050153 | ID=cds.MS.gene069880.t1;Parent=MS.gene069880.t1 |
| chr2.1 | exon | 4048873 | 4048959 | 4048873 | ID=MS.gene069880.t1.exon9;Parent=MS.gene069880.t1 |
| chr2.1 | CDS | 4048873 | 4048959 | 4048873 | ID=cds.MS.gene069880.t1;Parent=MS.gene069880.t1 |
| chr2.1 | exon | 4048049 | 4048742 | 4048049 | ID=MS.gene069880.t1.exon10;Parent=MS.gene069880.t1 |
| chr2.1 | CDS | 4048049 | 4048742 | 4048049 | ID=cds.MS.gene069880.t1;Parent=MS.gene069880.t1 |
| chr2.1 | exon | 4046895 | 4047268 | 4046895 | ID=MS.gene069880.t1.exon11;Parent=MS.gene069880.t1 |
| chr2.1 | CDS | 4046895 | 4047268 | 4046895 | ID=cds.MS.gene069880.t1;Parent=MS.gene069880.t1 |
| chr2.1 | exon | 4046584 | 4046657 | 4046584 | ID=MS.gene069880.t1.exon12;Parent=MS.gene069880.t1 |
| chr2.1 | CDS | 4046584 | 4046657 | 4046584 | ID=cds.MS.gene069880.t1;Parent=MS.gene069880.t1 |
| chr2.1 | exon | 4046279 | 4046384 | 4046279 | ID=MS.gene069880.t1.exon13;Parent=MS.gene069880.t1 |
| chr2.1 | CDS | 4046279 | 4046384 | 4046279 | ID=cds.MS.gene069880.t1;Parent=MS.gene069880.t1 |
| chr2.1 | exon | 4045269 | 4046143 | 4045269 | ID=MS.gene069880.t1.exon14;Parent=MS.gene069880.t1 |
| chr2.1 | CDS | 4045269 | 4046143 | 4045269 | ID=cds.MS.gene069880.t1;Parent=MS.gene069880.t1 |
| chr2.1 | exon | 4044875 | 4044950 | 4044875 | ID=MS.gene069880.t1.exon15;Parent=MS.gene069880.t1 |
| chr2.1 | CDS | 4044875 | 4044950 | 4044875 | ID=cds.MS.gene069880.t1;Parent=MS.gene069880.t1 |
| chr2.1 | exon | 4044658 | 4044769 | 4044658 | ID=MS.gene069880.t1.exon16;Parent=MS.gene069880.t1 |
| chr2.1 | CDS | 4044658 | 4044769 | 4044658 | ID=cds.MS.gene069880.t1;Parent=MS.gene069880.t1 |
| chr2.1 | exon | 4044157 | 4044233 | 4044157 | ID=MS.gene069880.t1.exon17;Parent=MS.gene069880.t1 |
| chr2.1 | CDS | 4044157 | 4044233 | 4044157 | ID=cds.MS.gene069880.t1;Parent=MS.gene069880.t1 |
| chr2.1 | exon | 4043688 | 4043768 | 4043688 | ID=MS.gene069880.t1.exon18;Parent=MS.gene069880.t1 |
| chr2.1 | CDS | 4043688 | 4043768 | 4043688 | ID=cds.MS.gene069880.t1;Parent=MS.gene069880.t1 |
| chr2.1 | exon | 4043420 | 4043499 | 4043420 | ID=MS.gene069880.t1.exon19;Parent=MS.gene069880.t1 |
| chr2.1 | CDS | 4043420 | 4043499 | 4043420 | ID=cds.MS.gene069880.t1;Parent=MS.gene069880.t1 |
| chr2.1 | exon | 4043283 | 4043319 | 4043283 | ID=MS.gene069880.t1.exon20;Parent=MS.gene069880.t1 |
| chr2.1 | CDS | 4043283 | 4043319 | 4043283 | ID=cds.MS.gene069880.t1;Parent=MS.gene069880.t1 |
| Gene Sequence |
| Protein sequence |