Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene069880.t1 | XP_003597674.1 | 96.5 | 1140 | 40 | 0 | 1 | 1140 | 1 | 1140 | 0.00E+00 | 2128.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene069880.t1 | Q0WVF8 | 45.6 | 1153 | 591 | 11 | 1 | 1138 | 2 | 1133 | 1.0e-271 | 937.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene069880.t1 | G7IHZ6 | 96.5 | 1140 | 40 | 0 | 1 | 1140 | 1 | 1140 | 0.0e+00 | 2128.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049207 | MS.gene069880 | 0.838743 | 2.40E-57 | -1.69E-46 |
MS.gene049824 | MS.gene069880 | 0.849448 | 3.21E-60 | -1.69E-46 |
MS.gene049825 | MS.gene069880 | 0.82188 | 3.19E-53 | -1.69E-46 |
MS.gene049873 | MS.gene069880 | 0.806938 | 6.45E-50 | -1.69E-46 |
MS.gene050427 | MS.gene069880 | 0.81435 | 1.61E-51 | -1.69E-46 |
MS.gene050885 | MS.gene069880 | 0.804728 | 1.88E-49 | -1.69E-46 |
MS.gene055166 | MS.gene069880 | 0.806435 | 8.24E-50 | -1.69E-46 |
MS.gene055808 | MS.gene069880 | 0.819455 | 1.15E-52 | -1.69E-46 |
MS.gene056403 | MS.gene069880 | 0.800256 | 1.57E-48 | -1.69E-46 |
MS.gene05954 | MS.gene069880 | 0.813538 | 2.43E-51 | -1.69E-46 |
MS.gene059935 | MS.gene069880 | 0.801323 | 9.51E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene35361 | MS.gene069880 | PPI |
MS.gene069880 | MS.gene91488 | PPI |
MS.gene073095 | MS.gene069880 | PPI |
MS.gene94650 | MS.gene069880 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene069880.t1 | MTR_2g100870 | 96.491 | 1140 | 40 | 0 | 1 | 1140 | 1 | 1140 | 0.0 | 2258 |
MS.gene069880.t1 | MTR_5g085950 | 86.053 | 1140 | 158 | 1 | 1 | 1140 | 1 | 1139 | 0.0 | 1943 |
MS.gene069880.t1 | MTR_5g055460 | 83.333 | 48 | 8 | 0 | 175 | 222 | 17 | 64 | 1.46e-19 | 85.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene069880.t1 | AT5G48120 | 45.533 | 1153 | 592 | 11 | 1 | 1138 | 2 | 1133 | 0.0 | 948 |
MS.gene069880.t1 | AT5G48120 | 45.533 | 1153 | 592 | 11 | 1 | 1138 | 2 | 1133 | 0.0 | 948 |
MS.gene069880.t1 | AT5G48120 | 45.533 | 1153 | 592 | 11 | 1 | 1138 | 2 | 1133 | 0.0 | 948 |
Find 208 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTTAAGAATGATGGATAAAT+TGG | 0.076592 | 2.1:-4048304 | MS.gene069880:CDS |
AGACACTTTATATACTTATT+TGG | 0.080986 | 2.1:-4048628 | MS.gene069880:CDS |
TGCAGAAGCCCTCTTATATT+TGG | 0.180661 | 2.1:+4045881 | None:intergenic |
ATATTCTCAAATGTTGATTT+TGG | 0.185446 | 2.1:+4047196 | None:intergenic |
TGCAATTTGCTGTGGATATT+TGG | 0.195724 | 2.1:-4046327 | MS.gene069880:CDS |
CATGAGACGTTAAATTTCTT+TGG | 0.197723 | 2.1:+4046633 | None:intergenic |
TCAATTATCATAGAAGATTT+TGG | 0.200733 | 2.1:-4047157 | MS.gene069880:CDS |
TGAAACTGCTGTTCAGCTTT+TGG | 0.210397 | 2.1:-4046612 | MS.gene069880:CDS |
GACACTTTATATACTTATTT+GGG | 0.214061 | 2.1:-4048627 | MS.gene069880:CDS |
TCAACTACAACTTCGTTCTT+TGG | 0.238088 | 2.1:+4048555 | None:intergenic |
CTTGCAAAATGGCGGTATTT+TGG | 0.239622 | 2.1:-4048256 | MS.gene069880:CDS |
GCTTCTACTTTGAGTGAAAA+AGG | 0.246531 | 2.1:+4046983 | None:intergenic |
TATACTGAATGAAGCTAAAA+AGG | 0.249796 | 2.1:-4044874 | MS.gene069880:intron |
CAAAATATACTGGGGCTATT+TGG | 0.258873 | 2.1:-4048662 | MS.gene069880:CDS |
TATATTTGGAATGTGTGTTT+TGG | 0.263185 | 2.1:+4045895 | None:intergenic |
TTATATTCAACACAAAATTA+TGG | 0.275586 | 2.1:-4045724 | MS.gene069880:CDS |
TGTTCCAGTTGCACAGGCTT+TGG | 0.282641 | 2.1:-4045828 | MS.gene069880:CDS |
GCTGTCTTATTTAATGCCTT+TGG | 0.286607 | 2.1:-4048108 | MS.gene069880:CDS |
TACACAGACCTCGGATAAAT+TGG | 0.288390 | 2.1:+4046886 | None:intergenic |
GTTCCAGTTGCACAGGCTTT+GGG | 0.289048 | 2.1:-4045827 | MS.gene069880:CDS |
CACTTGCAGGTTCAATCTTT+AGG | 0.305593 | 2.1:-4052080 | MS.gene069880:CDS |
GCAGCTCATACCAGTTCTTC+TGG | 0.317367 | 2.1:-4044751 | MS.gene069880:intron |
AAAGCAAGCATTAAACATTC+TGG | 0.318254 | 2.1:+4050638 | None:intergenic |
TTGAAAGCATTATTTCATAT+TGG | 0.321286 | 2.1:-4047109 | MS.gene069880:CDS |
AACATTGATGGCTTGCAAAA+TGG | 0.325223 | 2.1:-4048267 | MS.gene069880:CDS |
GATTCTCTCTGCTCCATACT+TGG | 0.328652 | 2.1:+4048686 | None:intergenic |
GCCTCACAAAGTGTTAATTT+CGG | 0.341373 | 2.1:-4048234 | MS.gene069880:CDS |
GAGCCCAAAGCCTGTGCAAC+TGG | 0.345968 | 2.1:+4045824 | None:intergenic |
TTCTTCAGGAATTCTTCTTC+TGG | 0.346745 | 2.1:-4052826 | MS.gene069880:intron |
TGCCGATTCAATTGCCTCAT+TGG | 0.354326 | 2.1:-4051636 | MS.gene069880:intron |
GAGAGAATCACAAAATATAC+TGG | 0.360014 | 2.1:-4048672 | MS.gene069880:CDS |
CATACAAGATATCTTTATCT+TGG | 0.362497 | 2.1:+4044700 | None:intergenic |
AAAAGTACCCCTTCATCCTT+AGG | 0.362568 | 2.1:+4045950 | None:intergenic |
GTTGCAAGCTTGGATGCAAT+TGG | 0.372632 | 2.1:-4053695 | MS.gene069880:CDS |
TCACCTCCAATGTATATATC+AGG | 0.379956 | 2.1:+4048045 | None:intergenic |
ACTTCCGTGCCTTTAGTTGA+AGG | 0.385121 | 2.1:-4045479 | MS.gene069880:CDS |
ATGGGCAGGATCCTTGAAAA+TGG | 0.386884 | 2.1:-4046370 | MS.gene069880:intron |
ATCTTTATCTTGGATATCTT+CGG | 0.387694 | 2.1:+4044710 | None:intergenic |
AAAAGATTGAGTAATGGATT+TGG | 0.388568 | 2.1:+4052109 | None:intergenic |
ATGCCATTTGTGGGCTCTCA+TGG | 0.397432 | 2.1:-4045592 | MS.gene069880:CDS |
AGAGTGTGCTCCTCCAAGTA+TGG | 0.397798 | 2.1:-4048699 | MS.gene069880:CDS |
GGAAGATTGACATTAACTTC+TGG | 0.399199 | 2.1:-4045989 | MS.gene069880:CDS |
GTAGTTCTATACAGAGATAA+AGG | 0.401655 | 2.1:+4048208 | None:intergenic |
TCTAATAATATGTTACAGAT+AGG | 0.403816 | 2.1:-4045695 | MS.gene069880:CDS |
CTTCAAACCAATGCCATTTG+TGG | 0.407593 | 2.1:-4045602 | MS.gene069880:CDS |
AGGTGCGCTCGTTGGTTGCT+TGG | 0.408972 | 2.1:-4052180 | MS.gene069880:CDS |
TAATTCTCCATTTGAGGAAA+AGG | 0.410569 | 2.1:-4046278 | MS.gene069880:intron |
AGTGTTGTGGGTACGGTAAC+GGG | 0.413671 | 2.1:-4052140 | MS.gene069880:CDS |
GAAGTACTGACCATGCTTGC+CGG | 0.413682 | 2.1:+4043409 | None:intergenic |
TTAAGAATGATGGATAAATT+GGG | 0.416904 | 2.1:-4048303 | MS.gene069880:CDS |
GTTCTTACTGATTTATGTCT+CGG | 0.417407 | 2.1:-4045644 | MS.gene069880:CDS |
AGCTGAGGAACTATGAAGTA+TGG | 0.418824 | 2.1:+4048128 | None:intergenic |
ACTCTCAGGATGCAGGGAAT+TGG | 0.421940 | 2.1:-4048187 | MS.gene069880:CDS |
TCAAGTGAGCCTTCAACTAA+AGG | 0.422165 | 2.1:+4045470 | None:intergenic |
AATCCATGCAATTTCCTGCT+TGG | 0.428610 | 2.1:+4046302 | None:intergenic |
AAGAAGAAAGTTTCTGAAGA+AGG | 0.429146 | 2.1:+4048890 | None:intergenic |
ACACACATTCCAAATATAAG+AGG | 0.429195 | 2.1:-4045890 | MS.gene069880:CDS |
GTAGAAGCATTATATGATAT+CGG | 0.429218 | 2.1:-4046968 | MS.gene069880:CDS |
GCACAATAAGCTGCTGAAGC+AGG | 0.431485 | 2.1:+4048523 | None:intergenic |
AAGTCTGATACCGTCTTATG+AGG | 0.431679 | 2.1:+4044146 | None:intergenic |
GACAAGCAATCCAGAAGAAC+TGG | 0.432210 | 2.1:+4044741 | None:intergenic |
TTGGTTGCTTGGCACTGATA+AGG | 0.433268 | 2.1:-4052169 | MS.gene069880:CDS |
TAGCTTGGTTGGGTTCTTCA+AGG | 0.437441 | 2.1:-4052751 | MS.gene069880:CDS |
TGTATTGCAGGTTGCAAGCT+TGG | 0.439105 | 2.1:-4053705 | MS.gene069880:intron |
GATCTGATTCTTTATTGTCC+AGG | 0.441249 | 2.1:-4045268 | MS.gene069880:intron |
TGGCATTCCATAGTACTGTT+TGG | 0.446947 | 2.1:+4047134 | None:intergenic |
TTCAAACCAATGCCATTTGT+GGG | 0.447068 | 2.1:-4045601 | MS.gene069880:CDS |
ATCAGACTTCTCTGCACCAT+TGG | 0.447336 | 2.1:+4045775 | None:intergenic |
AGGAATTCTTCTTCTGGCAG+AGG | 0.451191 | 2.1:-4052820 | MS.gene069880:CDS |
AAAACTATACATAGCTTGGT+TGG | 0.451872 | 2.1:-4052762 | MS.gene069880:CDS |
GGGTGTTGTTCCAGTTGCAC+AGG | 0.458087 | 2.1:-4045834 | MS.gene069880:CDS |
CACAGCATTGCAGGAAGGAA+TGG | 0.459401 | 2.1:+4048341 | None:intergenic |
AATCTTTAGGACTGCATGAC+AGG | 0.461991 | 2.1:-4052067 | MS.gene069880:CDS |
AAAGTACCCCTTCATCCTTA+GGG | 0.462262 | 2.1:+4045951 | None:intergenic |
TAGGTAATGGATCAAGTAAT+GGG | 0.464527 | 2.1:-4045676 | MS.gene069880:CDS |
CAAGATAAAGATATCTTGTA+TGG | 0.465086 | 2.1:-4044699 | MS.gene069880:CDS |
CACTATTTCTGTGCAAGAAA+AGG | 0.466787 | 2.1:-4048412 | MS.gene069880:CDS |
TGAGATCAATTGCAGAAAGA+TGG | 0.467104 | 2.1:+4045292 | None:intergenic |
GCTAGAGTAAAAGAGAAATC+TGG | 0.469250 | 2.1:+4048600 | None:intergenic |
CGATTATATCCTGATCCATC+TGG | 0.470202 | 2.1:-4050593 | MS.gene069880:CDS |
TAGAACTACTCTCAGGATGC+AGG | 0.472025 | 2.1:-4048194 | MS.gene069880:CDS |
GGGCTCTCATGGATTGGAAA+AGG | 0.473984 | 2.1:-4045581 | MS.gene069880:CDS |
TGGGAGTGAACCTGGTGAGA+TGG | 0.474738 | 2.1:+4053787 | None:intergenic |
AAGTTTCAGCTTAATGATGT+AGG | 0.474859 | 2.1:-4046010 | MS.gene069880:CDS |
TTGCAAGCTTGGATGCAATT+GGG | 0.475056 | 2.1:-4053694 | MS.gene069880:CDS |
AAGGAGAAACTACATGCTAT+TGG | 0.476172 | 2.1:-4048393 | MS.gene069880:CDS |
CTTACATGTGTAAAGTGAAT+CGG | 0.477840 | 2.1:+4050518 | None:intergenic |
ATTTGTGGGCTCTCATGGAT+TGG | 0.477974 | 2.1:-4045587 | MS.gene069880:CDS |
TTATTTATAATCAGGCAGAT+TGG | 0.478009 | 2.1:-4052214 | MS.gene069880:intron |
GCACACTCTAAGATATTGTA+AGG | 0.481622 | 2.1:+4048713 | None:intergenic |
AAACTATACATAGCTTGGTT+GGG | 0.482444 | 2.1:-4052761 | MS.gene069880:CDS |
GTAAAGTGAATCGGAAAGTA+AGG | 0.484365 | 2.1:+4050527 | None:intergenic |
AATGCACATATTATCATCAA+TGG | 0.492111 | 2.1:-4044191 | MS.gene069880:CDS |
TGGGTTCTTCAAGGAAAGAA+TGG | 0.495618 | 2.1:-4052742 | MS.gene069880:intron |
AAAATTCAGCGAGTCTGAAA+AGG | 0.497418 | 2.1:-4047074 | MS.gene069880:CDS |
GACATTTCCCCTAAGGATGA+AGG | 0.497426 | 2.1:-4045959 | MS.gene069880:CDS |
CTCATAAGATGCAATGCTGT+TGG | 0.497867 | 2.1:+4048443 | None:intergenic |
GAGGAAAAGTGTTGTGGGTA+CGG | 0.500931 | 2.1:-4052147 | MS.gene069880:CDS |
AATATGTTACAGATAGGTAA+TGG | 0.501229 | 2.1:-4045689 | MS.gene069880:CDS |
TACCAATGAGGCAATTGAAT+CGG | 0.502183 | 2.1:+4051634 | None:intergenic |
TGAAATTTAGGTTAGAGAGT+TGG | 0.502230 | 2.1:-4053509 | MS.gene069880:intron |
CACAATAAGCTGCTGAAGCA+GGG | 0.507341 | 2.1:+4048524 | None:intergenic |
AAGTGTTGTGGGTACGGTAA+CGG | 0.511090 | 2.1:-4052141 | MS.gene069880:CDS |
AGAGCAGAAATGTGATCCTC+TGG | 0.513326 | 2.1:-4045438 | MS.gene069880:CDS |
GCAGGAAGGAATGGAAGTCT+TGG | 0.514261 | 2.1:+4048350 | None:intergenic |
TCTCTCTGCTCCATACTTGG+AGG | 0.515380 | 2.1:+4048689 | None:intergenic |
TGGAAAGTTAATACCATCTG+TGG | 0.516141 | 2.1:+4048575 | None:intergenic |
GCAAGTAGACCAGATGGATC+AGG | 0.516624 | 2.1:+4050584 | None:intergenic |
TTGCAGAAAGATGGGCATCA+TGG | 0.520421 | 2.1:+4045301 | None:intergenic |
CTGTCAAATGCCGGCAAGCA+TGG | 0.520628 | 2.1:-4043419 | MS.gene069880:intron |
CTCTTCAACTCCATCTCACC+AGG | 0.521795 | 2.1:-4053797 | MS.gene069880:intron |
TCTGATCCTGATATATACAT+TGG | 0.522783 | 2.1:-4048051 | MS.gene069880:CDS |
GAAAGTTTCTGAAGAAGGAG+AGG | 0.523072 | 2.1:+4048895 | None:intergenic |
GCAGTACGAGGTGCGCTCGT+TGG | 0.524945 | 2.1:-4052188 | MS.gene069880:CDS |
TGAGAGCCCACAAATGGCAT+TGG | 0.529030 | 2.1:+4045595 | None:intergenic |
TACATCATTAAGCTGAAACT+TGG | 0.529117 | 2.1:+4046012 | None:intergenic |
AGAAGGAGAGGAATGACAAA+TGG | 0.529592 | 2.1:+4048907 | None:intergenic |
GAAGTCTGATGAACTTACCT+TGG | 0.531629 | 2.1:-4045762 | MS.gene069880:CDS |
AATCCATGAGAGCCCACAAA+TGG | 0.532104 | 2.1:+4045589 | None:intergenic |
GCTTACAATTCTTCAAGCGA+TGG | 0.534202 | 2.1:-4046924 | MS.gene069880:CDS |
GAGATCAATTGCAGAAAGAT+GGG | 0.536252 | 2.1:+4045293 | None:intergenic |
TTTAATAATAACCCTCCTCA+AGG | 0.537659 | 2.1:-4045855 | MS.gene069880:CDS |
GGGCATCGATTGCCTCATCT+AGG | 0.541580 | 2.1:-4043298 | MS.gene069880:CDS |
ATAGGTAATGGATCAAGTAA+TGG | 0.542296 | 2.1:-4045677 | MS.gene069880:CDS |
AAAATATGACATTTCCCCTA+AGG | 0.543815 | 2.1:-4045966 | MS.gene069880:CDS |
ACATTTCCCCTAAGGATGAA+GGG | 0.544414 | 2.1:-4045958 | MS.gene069880:CDS |
CTCTGTATAGAACTACTCTC+AGG | 0.544666 | 2.1:-4048201 | MS.gene069880:CDS |
GAACCAAGCAGGAAATTGCA+TGG | 0.546490 | 2.1:-4046305 | MS.gene069880:CDS |
ATAAGGAGGAAAAGTGTTGT+GGG | 0.547829 | 2.1:-4052152 | MS.gene069880:CDS |
GTACCATCAGAGTCCTTGAT+AGG | 0.548690 | 2.1:+4050149 | None:intergenic |
GTGGATATTTGGAACCAAGC+AGG | 0.552500 | 2.1:-4046316 | MS.gene069880:CDS |
GCAATGAAGCTGTCAAATGC+CGG | 0.553254 | 2.1:-4043428 | MS.gene069880:CDS |
TGGAGGTGCAGAGGATTTCG+TGG | 0.554978 | 2.1:-4046350 | MS.gene069880:CDS |
ATTCTTGCAAGCTACTTCCA+TGG | 0.557389 | 2.1:-4046583 | MS.gene069880:intron |
GATCCTGATATATACATTGG+AGG | 0.557628 | 2.1:-4048048 | MS.gene069880:intron |
TGCAACGAGATGACCTATCA+AGG | 0.557982 | 2.1:-4050162 | MS.gene069880:CDS |
GATACAGTTATTCGATCAAG+AGG | 0.561676 | 2.1:-4053466 | MS.gene069880:intron |
AATCGGCATGATGTTCTAGC+AGG | 0.561685 | 2.1:+4051651 | None:intergenic |
TTCTTCACTACATTCAGCAA+AGG | 0.562396 | 2.1:-4048872 | MS.gene069880:intron |
GAAAATTTCATGCCACAGTA+CGG | 0.562746 | 2.1:-4045352 | MS.gene069880:CDS |
TTGTAGAAAAGATTGAGTAA+TGG | 0.565621 | 2.1:+4052103 | None:intergenic |
GATAAGGAGGAAAAGTGTTG+TGG | 0.565850 | 2.1:-4052153 | MS.gene069880:CDS |
ATGTATATATCAGGATCAGA+GGG | 0.568346 | 2.1:+4048054 | None:intergenic |
TGCTTCTAGAGTTAAAGCAT+TGG | 0.570514 | 2.1:+4053658 | None:intergenic |
AAAGCGATGAAAGTTTCTGT+TGG | 0.571764 | 2.1:-4046100 | MS.gene069880:CDS |
ACAATTCTTCAAGCGATGGA+AGG | 0.572459 | 2.1:-4046920 | MS.gene069880:CDS |
CTGGTGAGATGGAGTTGAAG+AGG | 0.576523 | 2.1:+4053798 | None:intergenic |
CAGTAAAACTATACATAGCT+TGG | 0.576918 | 2.1:-4052766 | MS.gene069880:CDS |
AATGTATATATCAGGATCAG+AGG | 0.579679 | 2.1:+4048053 | None:intergenic |
TTCTTTACCAGCAAACCAGT+GGG | 0.580902 | 2.1:-4050195 | MS.gene069880:intron |
TCCGAAATTAACACTTTGTG+AGG | 0.585080 | 2.1:+4048233 | None:intergenic |
CAATGGTCTAACTAAGCTTG+TGG | 0.585599 | 2.1:-4044174 | MS.gene069880:CDS |
GTGGCACATTTCCTTGCCAG+AGG | 0.587914 | 2.1:+4045422 | None:intergenic |
AAGCGATGAAAGTTTCTGTT+GGG | 0.589357 | 2.1:-4046099 | MS.gene069880:CDS |
TAGCTTGATAATTGATGATG+AGG | 0.592254 | 2.1:-4048481 | MS.gene069880:CDS |
GGAATTGGTTATTCTGTCTG+AGG | 0.592338 | 2.1:-4048172 | MS.gene069880:CDS |
AAGCTTGCAAGTAGACCAGA+TGG | 0.592834 | 2.1:+4050578 | None:intergenic |
AATATCAAGAGCTTCTTCCA+AGG | 0.593516 | 2.1:+4045745 | None:intergenic |
GTTGCTTGGCACTGATAAGG+AGG | 0.593536 | 2.1:-4052166 | MS.gene069880:CDS |
TTTAGGACTGCATGACAGGA+AGG | 0.596853 | 2.1:-4052063 | MS.gene069880:intron |
TATCTATCCGTTGAGAACAC+AGG | 0.597641 | 2.1:-4043687 | MS.gene069880:intron |
AGAGAATCACAAAATATACT+GGG | 0.598522 | 2.1:-4048671 | MS.gene069880:CDS |
CACACATTCCAAATATAAGA+GGG | 0.598820 | 2.1:-4045889 | MS.gene069880:CDS |
TTAATAATAACCCTCCTCAA+GGG | 0.599027 | 2.1:-4045854 | MS.gene069880:CDS |
TTTCGTGGTGCAATTTGCTG+TGG | 0.599331 | 2.1:-4046335 | MS.gene069880:CDS |
TTTCTTTACCAGCAAACCAG+TGG | 0.603166 | 2.1:-4050196 | MS.gene069880:intron |
TCATTCAGTATAACAATCAG+TGG | 0.604482 | 2.1:+4044885 | None:intergenic |
TATATTTACCAATTTATCCG+AGG | 0.604801 | 2.1:-4046894 | MS.gene069880:intron |
TTTACTCTAGCACCCACAGA+TGG | 0.604886 | 2.1:-4048588 | MS.gene069880:CDS |
ACACTTTATATACTTATTTG+GGG | 0.607680 | 2.1:-4048626 | MS.gene069880:CDS |
AGAACTACTCTCAGGATGCA+GGG | 0.611678 | 2.1:-4048193 | MS.gene069880:CDS |
GGAAAAGGTTTGCTGTTGCG+TGG | 0.612022 | 2.1:-4045566 | MS.gene069880:CDS |
CTGGAACAACACCCTTGAGG+AGG | 0.612104 | 2.1:+4045843 | None:intergenic |
TACAGCTAAGACTGAACCAA+AGG | 0.615923 | 2.1:+4048092 | None:intergenic |
AGAAATGTGATCCTCTGGCA+AGG | 0.616514 | 2.1:-4045433 | MS.gene069880:CDS |
CCTTGAAAATGGAGGTGCAG+AGG | 0.618663 | 2.1:-4046359 | MS.gene069880:CDS |
AGTCTGATACCGTCTTATGA+GGG | 0.618808 | 2.1:+4044147 | None:intergenic |
TGACCTATCAAGGACTCTGA+TGG | 0.620654 | 2.1:-4050152 | MS.gene069880:intron |
GGAAAGTTAATACCATCTGT+GGG | 0.621048 | 2.1:+4048576 | None:intergenic |
AAACTCACTTCGAAATCCAA+TGG | 0.626907 | 2.1:-4045791 | MS.gene069880:CDS |
CATTTCCCCTAAGGATGAAG+GGG | 0.630449 | 2.1:-4045957 | MS.gene069880:CDS |
CACTTTATATACTTATTTGG+GGG | 0.631526 | 2.1:-4048625 | MS.gene069880:CDS |
TGAAACACAGCATTGCAGGA+AGG | 0.632076 | 2.1:+4048336 | None:intergenic |
TGACAAACCTGTGTTCTCAA+CGG | 0.634669 | 2.1:+4043680 | None:intergenic |
AAGTACCCCTTCATCCTTAG+GGG | 0.634965 | 2.1:+4045952 | None:intergenic |
GTCAGACATGACATGTGCAA+AGG | 0.638569 | 2.1:+4044911 | None:intergenic |
TGAGCCTTCAACTAAAGGCA+CGG | 0.639359 | 2.1:+4045475 | None:intergenic |
TGGAACAACACCCTTGAGGA+GGG | 0.639744 | 2.1:+4045844 | None:intergenic |
GGCATTAAATAAGACAGCTG+AGG | 0.645320 | 2.1:+4048113 | None:intergenic |
TTGCACATGAGTATCCCCAC+TGG | 0.650398 | 2.1:+4050180 | None:intergenic |
CTTATATAGAGGCCGTACTG+TGG | 0.653810 | 2.1:+4045340 | None:intergenic |
AAGAACATGAAAAGCTTCCG+TGG | 0.653843 | 2.1:+4045403 | None:intergenic |
ATGAAATAATGCTTTCAATG+TGG | 0.654390 | 2.1:+4047114 | None:intergenic |
AACGGATAGATACGCACATG+AGG | 0.657874 | 2.1:+4043698 | None:intergenic |
TACGGCCTCTATATAAGCAG+AGG | 0.658188 | 2.1:-4045334 | MS.gene069880:CDS |
GGCAGGATCCTTGAAAATGG+AGG | 0.660852 | 2.1:-4046367 | MS.gene069880:intron |
TCTGGCAAGGAAATGTGCCA+CGG | 0.665729 | 2.1:-4045420 | MS.gene069880:CDS |
TGTGGACTACCCTCATAAGA+CGG | 0.673290 | 2.1:-4044156 | MS.gene069880:intron |
ATTGATGGCTTGCAAAATGG+CGG | 0.675116 | 2.1:-4048264 | MS.gene069880:CDS |
CAACTGGAACAACACCCTTG+AGG | 0.676901 | 2.1:+4045840 | None:intergenic |
GAAACGAAGACTCCTAGATG+AGG | 0.685715 | 2.1:+4043286 | None:intergenic |
AATGTGACGAGTCAATTGAG+TGG | 0.686701 | 2.1:+4053837 | None:intergenic |
GGAAGTAAGGACTACCAATG+AGG | 0.689143 | 2.1:+4051622 | None:intergenic |
GAGAATCACAAAATATACTG+GGG | 0.699475 | 2.1:-4048670 | MS.gene069880:CDS |
GCAGATTGGAAAGCAGTACG+AGG | 0.712571 | 2.1:-4052200 | MS.gene069880:CDS |
TCTTTACCAGCAAACCAGTG+GGG | 0.721811 | 2.1:-4050194 | MS.gene069880:intron |
AGTTGAAGAGGAGTCAACGT+AGG | 0.742240 | 2.1:+4053810 | None:intergenic |
TGTATATATCAGGATCAGAG+GGG | 0.758584 | 2.1:+4048055 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 4043283 | 4053869 | 4043283 | ID=MS.gene069880 |
chr2.1 | mRNA | 4043283 | 4053869 | 4043283 | ID=MS.gene069880.t1;Parent=MS.gene069880 |
chr2.1 | exon | 4053798 | 4053869 | 4053798 | ID=MS.gene069880.t1.exon1;Parent=MS.gene069880.t1 |
chr2.1 | CDS | 4053798 | 4053869 | 4053798 | ID=cds.MS.gene069880.t1;Parent=MS.gene069880.t1 |
chr2.1 | exon | 4053655 | 4053717 | 4053655 | ID=MS.gene069880.t1.exon2;Parent=MS.gene069880.t1 |
chr2.1 | CDS | 4053655 | 4053717 | 4053655 | ID=cds.MS.gene069880.t1;Parent=MS.gene069880.t1 |
chr2.1 | exon | 4053467 | 4053521 | 4053467 | ID=MS.gene069880.t1.exon3;Parent=MS.gene069880.t1 |
chr2.1 | CDS | 4053467 | 4053521 | 4053467 | ID=cds.MS.gene069880.t1;Parent=MS.gene069880.t1 |
chr2.1 | exon | 4052743 | 4052840 | 4052743 | ID=MS.gene069880.t1.exon4;Parent=MS.gene069880.t1 |
chr2.1 | CDS | 4052743 | 4052840 | 4052743 | ID=cds.MS.gene069880.t1;Parent=MS.gene069880.t1 |
chr2.1 | exon | 4052064 | 4052222 | 4052064 | ID=MS.gene069880.t1.exon5;Parent=MS.gene069880.t1 |
chr2.1 | CDS | 4052064 | 4052222 | 4052064 | ID=cds.MS.gene069880.t1;Parent=MS.gene069880.t1 |
chr2.1 | exon | 4051637 | 4051696 | 4051637 | ID=MS.gene069880.t1.exon6;Parent=MS.gene069880.t1 |
chr2.1 | CDS | 4051637 | 4051696 | 4051637 | ID=cds.MS.gene069880.t1;Parent=MS.gene069880.t1 |
chr2.1 | exon | 4050523 | 4050711 | 4050523 | ID=MS.gene069880.t1.exon7;Parent=MS.gene069880.t1 |
chr2.1 | CDS | 4050523 | 4050711 | 4050523 | ID=cds.MS.gene069880.t1;Parent=MS.gene069880.t1 |
chr2.1 | exon | 4050153 | 4050206 | 4050153 | ID=MS.gene069880.t1.exon8;Parent=MS.gene069880.t1 |
chr2.1 | CDS | 4050153 | 4050206 | 4050153 | ID=cds.MS.gene069880.t1;Parent=MS.gene069880.t1 |
chr2.1 | exon | 4048873 | 4048959 | 4048873 | ID=MS.gene069880.t1.exon9;Parent=MS.gene069880.t1 |
chr2.1 | CDS | 4048873 | 4048959 | 4048873 | ID=cds.MS.gene069880.t1;Parent=MS.gene069880.t1 |
chr2.1 | exon | 4048049 | 4048742 | 4048049 | ID=MS.gene069880.t1.exon10;Parent=MS.gene069880.t1 |
chr2.1 | CDS | 4048049 | 4048742 | 4048049 | ID=cds.MS.gene069880.t1;Parent=MS.gene069880.t1 |
chr2.1 | exon | 4046895 | 4047268 | 4046895 | ID=MS.gene069880.t1.exon11;Parent=MS.gene069880.t1 |
chr2.1 | CDS | 4046895 | 4047268 | 4046895 | ID=cds.MS.gene069880.t1;Parent=MS.gene069880.t1 |
chr2.1 | exon | 4046584 | 4046657 | 4046584 | ID=MS.gene069880.t1.exon12;Parent=MS.gene069880.t1 |
chr2.1 | CDS | 4046584 | 4046657 | 4046584 | ID=cds.MS.gene069880.t1;Parent=MS.gene069880.t1 |
chr2.1 | exon | 4046279 | 4046384 | 4046279 | ID=MS.gene069880.t1.exon13;Parent=MS.gene069880.t1 |
chr2.1 | CDS | 4046279 | 4046384 | 4046279 | ID=cds.MS.gene069880.t1;Parent=MS.gene069880.t1 |
chr2.1 | exon | 4045269 | 4046143 | 4045269 | ID=MS.gene069880.t1.exon14;Parent=MS.gene069880.t1 |
chr2.1 | CDS | 4045269 | 4046143 | 4045269 | ID=cds.MS.gene069880.t1;Parent=MS.gene069880.t1 |
chr2.1 | exon | 4044875 | 4044950 | 4044875 | ID=MS.gene069880.t1.exon15;Parent=MS.gene069880.t1 |
chr2.1 | CDS | 4044875 | 4044950 | 4044875 | ID=cds.MS.gene069880.t1;Parent=MS.gene069880.t1 |
chr2.1 | exon | 4044658 | 4044769 | 4044658 | ID=MS.gene069880.t1.exon16;Parent=MS.gene069880.t1 |
chr2.1 | CDS | 4044658 | 4044769 | 4044658 | ID=cds.MS.gene069880.t1;Parent=MS.gene069880.t1 |
chr2.1 | exon | 4044157 | 4044233 | 4044157 | ID=MS.gene069880.t1.exon17;Parent=MS.gene069880.t1 |
chr2.1 | CDS | 4044157 | 4044233 | 4044157 | ID=cds.MS.gene069880.t1;Parent=MS.gene069880.t1 |
chr2.1 | exon | 4043688 | 4043768 | 4043688 | ID=MS.gene069880.t1.exon18;Parent=MS.gene069880.t1 |
chr2.1 | CDS | 4043688 | 4043768 | 4043688 | ID=cds.MS.gene069880.t1;Parent=MS.gene069880.t1 |
chr2.1 | exon | 4043420 | 4043499 | 4043420 | ID=MS.gene069880.t1.exon19;Parent=MS.gene069880.t1 |
chr2.1 | CDS | 4043420 | 4043499 | 4043420 | ID=cds.MS.gene069880.t1;Parent=MS.gene069880.t1 |
chr2.1 | exon | 4043283 | 4043319 | 4043283 | ID=MS.gene069880.t1.exon20;Parent=MS.gene069880.t1 |
chr2.1 | CDS | 4043283 | 4043319 | 4043283 | ID=cds.MS.gene069880.t1;Parent=MS.gene069880.t1 |
Gene Sequence |
Protein sequence |