Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070724.t1 | XP_003596275.1 | 99.4 | 323 | 2 | 0 | 1 | 323 | 1 | 323 | 8.30E-162 | 579.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070724.t1 | Q9ZV88 | 69.5 | 334 | 82 | 8 | 1 | 323 | 1 | 325 | 3.6e-97 | 356.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070724.t1 | G7IR05 | 99.4 | 323 | 2 | 0 | 1 | 323 | 1 | 323 | 6.0e-162 | 579.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene070724.t1 | TF | BES1 |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049260 | MS.gene070724 | -0.826056 | 3.34E-54 | -1.69E-46 |
| MS.gene049758 | MS.gene070724 | -0.811429 | 7.03E-51 | -1.69E-46 |
| MS.gene050330 | MS.gene070724 | 0.834248 | 3.35E-56 | -1.69E-46 |
| MS.gene052178 | MS.gene070724 | -0.819979 | 8.74E-53 | -1.69E-46 |
| MS.gene052344 | MS.gene070724 | 0.817641 | 2.97E-52 | -1.69E-46 |
| MS.gene052917 | MS.gene070724 | 0.815501 | 8.95E-52 | -1.69E-46 |
| MS.gene053557 | MS.gene070724 | -0.810866 | 9.31E-51 | -1.69E-46 |
| MS.gene053836 | MS.gene070724 | -0.80572 | 1.16E-49 | -1.69E-46 |
| MS.gene055422 | MS.gene070724 | -0.804231 | 2.39E-49 | -1.69E-46 |
| MS.gene058845 | MS.gene070724 | -0.80572 | 1.17E-49 | -1.69E-46 |
| MS.gene059518 | MS.gene070724 | -0.822459 | 2.34E-53 | -1.69E-46 |
| MS.gene05984 | MS.gene070724 | -0.812217 | 4.74E-51 | -1.69E-46 |
| MS.gene059894 | MS.gene070724 | -0.802603 | 5.19E-49 | -1.69E-46 |
| MS.gene060476 | MS.gene070724 | -0.817609 | 3.02E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070724.t1 | MTR_2g075410 | 99.381 | 323 | 2 | 0 | 1 | 323 | 1 | 323 | 0.0 | 659 |
| MS.gene070724.t1 | MTR_2g075410 | 100.000 | 236 | 0 | 0 | 88 | 323 | 1 | 236 | 7.58e-172 | 476 |
| MS.gene070724.t1 | MTR_2g075400 | 74.303 | 323 | 76 | 1 | 1 | 323 | 1 | 316 | 1.82e-149 | 430 |
| MS.gene070724.t1 | MTR_1g021990 | 38.629 | 321 | 108 | 11 | 6 | 323 | 14 | 248 | 2.44e-42 | 147 |
| MS.gene070724.t1 | MTR_3g111680 | 41.742 | 333 | 148 | 14 | 3 | 321 | 12 | 312 | 4.48e-36 | 132 |
| MS.gene070724.t1 | MTR_5g019550 | 43.860 | 342 | 138 | 10 | 6 | 321 | 9 | 322 | 1.19e-32 | 123 |
| MS.gene070724.t1 | MTR_5g026210 | 40.870 | 115 | 65 | 2 | 17 | 131 | 61 | 172 | 2.01e-16 | 80.1 |
| MS.gene070724.t1 | MTR_5g026210 | 40.870 | 115 | 65 | 2 | 17 | 131 | 61 | 172 | 2.97e-16 | 79.7 |
| MS.gene070724.t1 | MTR_5g026210 | 40.870 | 115 | 65 | 2 | 17 | 131 | 61 | 172 | 3.37e-16 | 79.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070724.t1 | AT1G78700 | 69.760 | 334 | 81 | 8 | 1 | 323 | 1 | 325 | 5.31e-132 | 379 |
| MS.gene070724.t1 | AT4G18890 | 61.585 | 328 | 77 | 9 | 1 | 323 | 1 | 284 | 2.79e-103 | 304 |
| MS.gene070724.t1 | AT4G18890 | 52.988 | 251 | 69 | 9 | 78 | 323 | 2 | 208 | 1.46e-63 | 200 |
| MS.gene070724.t1 | AT1G75080 | 40.385 | 364 | 120 | 14 | 6 | 323 | 23 | 335 | 1.19e-46 | 160 |
| MS.gene070724.t1 | AT1G75080 | 40.385 | 364 | 120 | 14 | 6 | 323 | 23 | 335 | 1.19e-46 | 160 |
| MS.gene070724.t1 | AT1G19350 | 41.160 | 362 | 116 | 15 | 6 | 321 | 44 | 354 | 7.57e-45 | 157 |
| MS.gene070724.t1 | AT1G19350 | 40.884 | 362 | 117 | 15 | 6 | 321 | 22 | 332 | 8.48e-45 | 156 |
| MS.gene070724.t1 | AT1G19350 | 40.884 | 362 | 117 | 15 | 6 | 321 | 22 | 332 | 8.48e-45 | 156 |
| MS.gene070724.t1 | AT1G19350 | 40.884 | 362 | 117 | 15 | 6 | 321 | 22 | 332 | 8.48e-45 | 156 |
| MS.gene070724.t1 | AT1G19350 | 40.884 | 362 | 117 | 15 | 6 | 321 | 22 | 332 | 8.48e-45 | 156 |
| MS.gene070724.t1 | AT3G50750 | 42.331 | 326 | 105 | 10 | 6 | 318 | 14 | 269 | 2.37e-41 | 145 |
| MS.gene070724.t1 | AT4G36780 | 50.685 | 219 | 76 | 7 | 6 | 211 | 16 | 215 | 3.33e-33 | 124 |
| MS.gene070724.t1 | AT5G45300 | 48.235 | 85 | 41 | 1 | 17 | 101 | 97 | 178 | 4.52e-16 | 79.3 |
| MS.gene070724.t1 | AT5G45300 | 47.059 | 85 | 44 | 1 | 17 | 101 | 111 | 194 | 1.18e-15 | 78.2 |
| MS.gene070724.t1 | AT5G45300 | 47.059 | 85 | 44 | 1 | 17 | 101 | 97 | 180 | 1.20e-15 | 78.2 |
| MS.gene070724.t1 | AT2G45880 | 53.623 | 69 | 29 | 1 | 11 | 76 | 74 | 142 | 5.95e-15 | 75.9 |
Find 125 sgRNAs with CRISPR-Local
Find 263 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGACCCAGATTGGTTTGC+TGG | 0.249683 | 2.1:+24140656 | MS.gene070724:CDS |
| CTACTAATCCATTTGGCTTC+AGG | 0.251618 | 2.1:+24140729 | MS.gene070724:CDS |
| CCTCCCAGTCAGCTTTCCTC+TGG | 0.324519 | 2.1:-24140550 | None:intergenic |
| GAGAGGATCCATGAAGATTC+TGG | 0.328306 | 2.1:+24140929 | MS.gene070724:CDS |
| CACTACTTACCTGGTCTTTG+AGG | 0.341054 | 2.1:-24140981 | None:intergenic |
| CTGATCCCAGCAAACCAATC+TGG | 0.350204 | 2.1:-24140662 | None:intergenic |
| AGGGAATTTCCATCACCATT+AGG | 0.370323 | 2.1:-24140392 | None:intergenic |
| CATCTGATCCAGAATCTTCA+TGG | 0.372743 | 2.1:-24140937 | None:intergenic |
| GCATGGGATGAGCGCGGGCT+AGG | 0.380817 | 2.1:-24140362 | None:intergenic |
| TTCTCCGGTTTGAGAATGTA+TGG | 0.382953 | 2.1:+24137706 | MS.gene070724:CDS |
| CAGATTGGTTTGCTGGGATC+AGG | 0.383352 | 2.1:+24140663 | MS.gene070724:CDS |
| TACTAATCCATTTGGCTTCA+GGG | 0.383377 | 2.1:+24140730 | MS.gene070724:CDS |
| CTCCCAGTCAGCTTTCCTCT+GGG | 0.391858 | 2.1:-24140549 | None:intergenic |
| AAGGAAGAAGAGCCAGGACT+TGG | 0.403188 | 2.1:-24140338 | None:intergenic |
| GAGGATCAGTCTACTCGTCC+TGG | 0.410691 | 2.1:+24140569 | MS.gene070724:CDS |
| CTAGTCGCTACTAATCCATT+TGG | 0.412992 | 2.1:+24140722 | MS.gene070724:CDS |
| AGAGCCAGGACTTGGGTTGT+AGG | 0.415820 | 2.1:-24140330 | None:intergenic |
| ATTTCAGATGAATTTGCCTT+TGG | 0.420372 | 2.1:+24140869 | MS.gene070724:CDS |
| TCTACTCGTCCTGGGTGGGG+TGG | 0.421075 | 2.1:+24140578 | MS.gene070724:CDS |
| CTACTCGTCCTGGGTGGGGT+GGG | 0.424088 | 2.1:+24140579 | MS.gene070724:CDS |
| TGGAAGCAGTGCAGTTGGTT+TGG | 0.426703 | 2.1:+24140889 | MS.gene070724:CDS |
| GAGCTAAGTGGAGGAGTGAC+AGG | 0.433832 | 2.1:-24140509 | None:intergenic |
| TCATTGTTGTCGCAATGTTT+CGG | 0.441488 | 2.1:-24137742 | None:intergenic |
| AATATATAGCTGGGGAAGCT+TGG | 0.443626 | 2.1:-24140465 | None:intergenic |
| TTGACCCAGATTGGTTTGCT+GGG | 0.448546 | 2.1:+24140657 | MS.gene070724:CDS |
| ACCAATCTGGGTCAAGAACT+TGG | 0.450542 | 2.1:-24140649 | None:intergenic |
| ACCTCTTCCCTGAAGCCAAA+TGG | 0.452419 | 2.1:-24140737 | None:intergenic |
| TCCCATGCTGTAAATCCTAA+TGG | 0.453038 | 2.1:+24140377 | MS.gene070724:CDS |
| GCCAAGTTCTTGACCCAGAT+TGG | 0.457814 | 2.1:+24140648 | MS.gene070724:CDS |
| TAGGAGGAGTGGAGGAAGGC+TGG | 0.458194 | 2.1:-24140616 | None:intergenic |
| TGTTCTCCAGCTTTAGCTGC+AGG | 0.458482 | 2.1:+24140809 | MS.gene070724:CDS |
| TCCTCCACTCCTCCTAGCCC+TGG | 0.459964 | 2.1:+24140623 | MS.gene070724:CDS |
| GAACATGTCCCACTTTGTCC+AGG | 0.469503 | 2.1:-24140791 | None:intergenic |
| GGGTCAAGAACTTGGCGACC+AGG | 0.476781 | 2.1:-24140641 | None:intergenic |
| ATCACATCCATGCGTTCTGC+AGG | 0.479028 | 2.1:-24140251 | None:intergenic |
| AGCCAGTGTGAATATATAGC+TGG | 0.480859 | 2.1:-24140475 | None:intergenic |
| TCCATTTGGCTTCAGGGAAG+AGG | 0.483652 | 2.1:+24140736 | MS.gene070724:CDS |
| CTCTGGGGTGATCGAGCAGT+TGG | 0.483752 | 2.1:-24140533 | None:intergenic |
| AGAACTTGGCGACCAGGGCT+AGG | 0.484854 | 2.1:-24140635 | None:intergenic |
| AGTTGGTTTGGTGAAGCCTT+GGG | 0.485013 | 2.1:+24140901 | MS.gene070724:CDS |
| GGATCAGGATGCCCCACAGC+GGG | 0.486389 | 2.1:+24140678 | MS.gene070724:CDS |
| GCCTTTGGAAGCAGTGCAGT+TGG | 0.487429 | 2.1:+24140884 | MS.gene070724:CDS |
| CACCCCAGAGGAAAGCTGAC+TGG | 0.487819 | 2.1:+24140546 | MS.gene070724:CDS |
| AGGAGAAGTTTGCCCGCTGT+GGG | 0.488942 | 2.1:-24140690 | None:intergenic |
| CATGGGATGAGCGCGGGCTA+GGG | 0.493897 | 2.1:-24140361 | None:intergenic |
| TCAGAGCCTGCAGCTAAAGC+TGG | 0.499118 | 2.1:-24140815 | None:intergenic |
| GATTCCCGCATGTGGACCCC+TGG | 0.499359 | 2.1:+24140773 | MS.gene070724:CDS |
| AAAGCTCTTTGTAATGAAGC+TGG | 0.501704 | 2.1:+24137772 | MS.gene070724:CDS |
| CTCTTTGTAATGAAGCTGGT+TGG | 0.502741 | 2.1:+24137776 | MS.gene070724:CDS |
| ACTTGGGTTGTAGGAAGCAC+AGG | 0.505215 | 2.1:-24140321 | None:intergenic |
| GCTTCCTACAACCCAAGTCC+TGG | 0.505291 | 2.1:+24140326 | MS.gene070724:CDS |
| GATGATTTAGAGCTCACTCT+TGG | 0.505956 | 2.1:+24140956 | MS.gene070724:CDS |
| TGGATCCTCTCTCCTTCCCA+AGG | 0.506658 | 2.1:-24140917 | None:intergenic |
| CAGTTGGTTTGGTGAAGCCT+TGG | 0.507522 | 2.1:+24140900 | MS.gene070724:CDS |
| TCAGTCTACTCGTCCTGGGT+GGG | 0.507843 | 2.1:+24140574 | MS.gene070724:CDS |
| GCGACCAGGGCTAGGAGGAG+TGG | 0.508618 | 2.1:-24140627 | None:intergenic |
| TTACGATACGTTGTACCATC+AGG | 0.508951 | 2.1:-24137808 | None:intergenic |
| GGATGAGCGCGGGCTAGGGA+AGG | 0.515742 | 2.1:-24140357 | None:intergenic |
| GTTCCCATACATTCTCAAAC+CGG | 0.515743 | 2.1:-24137710 | None:intergenic |
| ACCCCAGAGGAAAGCTGACT+GGG | 0.516090 | 2.1:+24140547 | MS.gene070724:CDS |
| GCGAGATGACGTCGGGGACG+AGG | 0.516345 | 2.1:+24137611 | None:intergenic |
| CAGTCTACTCGTCCTGGGTG+GGG | 0.517746 | 2.1:+24140575 | MS.gene070724:CDS |
| CTAGGGAAGGAAGAAGAGCC+AGG | 0.519399 | 2.1:-24140344 | None:intergenic |
| GCAGAACGCATGGATGTGAT+AGG | 0.523605 | 2.1:+24140254 | MS.gene070724:CDS |
| AGGAGTGACAGGAGCACTGA+TGG | 0.525130 | 2.1:-24140498 | None:intergenic |
| TGATCCCAGCAAACCAATCT+GGG | 0.525877 | 2.1:-24140661 | None:intergenic |
| CACCATTAGGATTTACAGCA+TGG | 0.525920 | 2.1:-24140379 | None:intergenic |
| GTGATAGGTGGTTCTGCAAT+GGG | 0.525969 | 2.1:+24140269 | MS.gene070724:CDS |
| TCTGAAATAGCTTCAGACAT+TGG | 0.527497 | 2.1:-24140854 | None:intergenic |
| GCCAGTGTGAATATATAGCT+GGG | 0.527684 | 2.1:-24140474 | None:intergenic |
| TTGTCCAGGGGTCCACATGC+GGG | 0.536824 | 2.1:-24140777 | None:intergenic |
| TAGGAGAAGTTTGCCCGCTG+TGG | 0.548726 | 2.1:-24140691 | None:intergenic |
| GGGCTAGGAGGAGTGGAGGA+AGG | 0.549534 | 2.1:-24140620 | None:intergenic |
| AGGATCAGTCTACTCGTCCT+GGG | 0.551485 | 2.1:+24140570 | MS.gene070724:CDS |
| ATGCAAGCCTGCAGAACGCA+TGG | 0.552883 | 2.1:+24140244 | MS.gene070724:CDS |
| ATAGCAGCGAAGATCTTCTC+CGG | 0.553180 | 2.1:+24137691 | MS.gene070724:CDS |
| ATGGAAATTCCCTCATTCCA+TGG | 0.555829 | 2.1:+24140402 | MS.gene070724:CDS |
| TTCTCTCTCTCCTTCCACGT+TGG | 0.560859 | 2.1:-24137637 | None:intergenic |
| GCTGTAAATCCTAATGGTGA+TGG | 0.562331 | 2.1:+24140383 | MS.gene070724:CDS |
| TAGCTGGGGAAGCTTGGAAG+AGG | 0.564442 | 2.1:-24140459 | None:intergenic |
| ACCAGGGCTAGGAGGAGTGG+AGG | 0.565432 | 2.1:-24140624 | None:intergenic |
| GACGAGGCAACCAACGTGGA+AGG | 0.571428 | 2.1:+24137627 | MS.gene070724:CDS |
| ATCAGTCTACTCGTCCTGGG+TGG | 0.572626 | 2.1:+24140573 | MS.gene070724:CDS |
| TTTGTCCAGGGGTCCACATG+CGG | 0.572765 | 2.1:-24140778 | None:intergenic |
| AACATGTCCCACTTTGTCCA+GGG | 0.573471 | 2.1:-24140790 | None:intergenic |
| CGAGCAGTTGGAGAGCTAAG+TGG | 0.574747 | 2.1:-24140521 | None:intergenic |
| ACCATTAGGATTTACAGCAT+GGG | 0.576979 | 2.1:-24140378 | None:intergenic |
| TCTCCGGTTTGAGAATGTAT+GGG | 0.580133 | 2.1:+24137707 | MS.gene070724:CDS |
| AGGAAGAAGAGCCAGGACTT+GGG | 0.580376 | 2.1:-24140337 | None:intergenic |
| CAAATGGATTAGTAGCGACT+AGG | 0.580823 | 2.1:-24140721 | None:intergenic |
| ACCAACTGCACTGCTTCCAA+AGG | 0.582208 | 2.1:-24140885 | None:intergenic |
| TCCCAGTCAGCTTTCCTCTG+GGG | 0.589485 | 2.1:-24140548 | None:intergenic |
| TTACAGCATGGGATGAGCGC+GGG | 0.592384 | 2.1:-24140367 | None:intergenic |
| TGTGATAGGTGGTTCTGCAA+TGG | 0.592423 | 2.1:+24140268 | MS.gene070724:CDS |
| GGTTGGATCGTTGAGCCTGA+TGG | 0.594077 | 2.1:+24137793 | MS.gene070724:CDS |
| ATGTGGACCCCTGGACAAAG+TGG | 0.596230 | 2.1:+24140782 | MS.gene070724:CDS |
| GGTCAAGAACTTGGCGACCA+GGG | 0.596349 | 2.1:-24140640 | None:intergenic |
| GGTTTGGTGAAGCCTTGGGA+AGG | 0.598437 | 2.1:+24140905 | MS.gene070724:CDS |
| TGATGGTACAACGTATCGTA+AGG | 0.599548 | 2.1:+24137810 | MS.gene070724:CDS |
| GGAGAAGTTTGCCCGCTGTG+GGG | 0.600569 | 2.1:-24140689 | None:intergenic |
| AGGAGAGAGAGAATAACAAG+AGG | 0.603214 | 2.1:+24137647 | MS.gene070724:CDS |
| TGAAGCCTTGGGAAGGAGAG+AGG | 0.605206 | 2.1:+24140912 | MS.gene070724:CDS |
| CTCTTGGTACCTCAAAGACC+AGG | 0.612700 | 2.1:+24140972 | MS.gene070724:CDS |
| GTGGCAGTGATTCCCGCATG+TGG | 0.613531 | 2.1:+24140765 | MS.gene070724:CDS |
| GTAGCGACTAGGCTGAAGGT+AGG | 0.624575 | 2.1:-24140710 | None:intergenic |
| TACTGCTGCCCACCCCACCC+AGG | 0.630033 | 2.1:-24140587 | None:intergenic |
| ATTAGTAGCGACTAGGCTGA+AGG | 0.637373 | 2.1:-24140714 | None:intergenic |
| ACTTGGCGACCAGGGCTAGG+AGG | 0.641842 | 2.1:-24140632 | None:intergenic |
| TGTGGACCCCTGGACAAAGT+GGG | 0.642302 | 2.1:+24140783 | MS.gene070724:CDS |
| CTGACATGGTAAGATGAACA+CGG | 0.642363 | 2.1:-24140296 | None:intergenic |
| CCCCAGCTATATATTCACAC+TGG | 0.648796 | 2.1:+24140473 | MS.gene070724:CDS |
| GCAGTTGGAGAGCTAAGTGG+AGG | 0.657333 | 2.1:-24140518 | None:intergenic |
| TTTACAGCATGGGATGAGCG+CGG | 0.658189 | 2.1:-24140368 | None:intergenic |
| AGGAAGCACAGGGACTGACA+TGG | 0.663416 | 2.1:-24140310 | None:intergenic |
| CGGGGACGAGGCAACCAACG+TGG | 0.666818 | 2.1:+24137623 | MS.gene070724:CDS |
| CTTGGGTTGTAGGAAGCACA+GGG | 0.669094 | 2.1:-24140320 | None:intergenic |
| CCAGAGGAAAGCTGACTGGG+AGG | 0.670133 | 2.1:+24140550 | MS.gene070724:CDS |
| ACATGTCCCACTTTGTCCAG+GGG | 0.671696 | 2.1:-24140789 | None:intergenic |
| TGACATGGTAAGATGAACAC+GGG | 0.677171 | 2.1:-24140295 | None:intergenic |
| CCAGTGTGAATATATAGCTG+GGG | 0.692170 | 2.1:-24140473 | None:intergenic |
| CTGATGATGATCCAGATGAG+AGG | 0.693997 | 2.1:-24140433 | None:intergenic |
| GGGATCAGGATGCCCCACAG+CGG | 0.711509 | 2.1:+24140677 | MS.gene070724:CDS |
| GAACGCATGGATGTGATAGG+TGG | 0.724307 | 2.1:+24140257 | MS.gene070724:CDS |
| CAACTGCTCGATCACCCCAG+AGG | 0.741309 | 2.1:+24140534 | MS.gene070724:CDS |
| TTTCCGGCGAGATGACGTCG+GGG | 0.771606 | 2.1:+24137605 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAAATATGGTATTTTT+AGG | + | chr2.1:24138573-24138592 | MS.gene070724:intron | 10.0% |
| !!! | TTCTAATTTTAGTATTAATT+TGG | + | chr2.1:24137898-24137917 | MS.gene070724:intron | 10.0% |
| !! | AAAAATTCACAAATTCAAAA+GGG | - | chr2.1:24138645-24138664 | None:intergenic | 15.0% |
| !! | AATGAAAATGTTTATTTCAA+GGG | + | chr2.1:24140221-24140240 | MS.gene070724:intron | 15.0% |
| !! | CATAATAATTTCAACAAAAA+TGG | - | chr2.1:24138233-24138252 | None:intergenic | 15.0% |
| !! | TAAAAAAAGAAGAAATATCA+CGG | - | chr2.1:24138797-24138816 | None:intergenic | 15.0% |
| !! | TAAAAATTCACAAATTCAAA+AGG | - | chr2.1:24138646-24138665 | None:intergenic | 15.0% |
| !! | TAATGAAAATGTTTATTTCA+AGG | + | chr2.1:24140220-24140239 | MS.gene070724:intron | 15.0% |
| !!! | ATGTCAATTTTTTTTTTTGA+AGG | - | chr2.1:24139279-24139298 | None:intergenic | 15.0% |
| !!! | TATGATTTTGTTGTTATTTT+TGG | + | chr2.1:24138329-24138348 | MS.gene070724:intron | 15.0% |
| !!! | TTGAATTTGTGAATTTTTAA+GGG | + | chr2.1:24138647-24138666 | MS.gene070724:intron | 15.0% |
| !!! | TTTGAATTTGTGAATTTTTA+AGG | + | chr2.1:24138646-24138665 | MS.gene070724:intron | 15.0% |
| !! | AAAAAAAGAAGAAATATCAC+GGG | - | chr2.1:24138796-24138815 | None:intergenic | 20.0% |
| !! | AAAAGATGAATAGAAAAATG+TGG | + | chr2.1:24139047-24139066 | MS.gene070724:intron | 20.0% |
| !! | AATAAAAATTGTTATGCATG+TGG | + | chr2.1:24138002-24138021 | MS.gene070724:intron | 20.0% |
| !! | AATAAATGCAAAAACGAAAA+TGG | - | chr2.1:24139018-24139037 | None:intergenic | 20.0% |
| !! | AATATACTAAAAGCTATCAA+TGG | + | chr2.1:24139713-24139732 | MS.gene070724:intron | 20.0% |
| !! | ATAAAAATTGTTATGCATGT+GGG | + | chr2.1:24138003-24138022 | MS.gene070724:intron | 20.0% |
| !! | TGAAATTATTATGTGTATCT+AGG | + | chr2.1:24138240-24138259 | MS.gene070724:intron | 20.0% |
| !! | TGAACAAAAATTAACCAAAA+TGG | + | chr2.1:24139141-24139160 | MS.gene070724:intron | 20.0% |
| !!! | AAATATGGTATTTTTAGGTT+TGG | + | chr2.1:24138578-24138597 | MS.gene070724:intron | 20.0% |
| !!! | AGATTTAATTCCTTTTTAAG+CGG | - | chr2.1:24139940-24139959 | None:intergenic | 20.0% |
| !!! | ATATGATATGTCAATTTTGT+AGG | - | chr2.1:24139256-24139275 | None:intergenic | 20.0% |
| !!! | ATATTAGATGCTTTATTGAA+GGG | + | chr2.1:24140082-24140101 | MS.gene070724:intron | 20.0% |
| !!! | ATATTTCTTCTTTTTTTAGG+AGG | + | chr2.1:24138799-24138818 | MS.gene070724:intron | 20.0% |
| !!! | GTGATATTTCTTCTTTTTTT+AGG | + | chr2.1:24138796-24138815 | MS.gene070724:intron | 20.0% |
| !!! | GTTAGATTCTTTCTTTTTTT+AGG | + | chr2.1:24138380-24138399 | MS.gene070724:intron | 20.0% |
| !!! | GTTTTTGCATTTATTGTTTT+TGG | + | chr2.1:24139023-24139042 | MS.gene070724:intron | 20.0% |
| !!! | TATATCATTTTAGCAACTAA+TGG | - | chr2.1:24140139-24140158 | None:intergenic | 20.0% |
| !!! | TTGTTGTTATTTTTGGTTTA+TGG | + | chr2.1:24138336-24138355 | MS.gene070724:intron | 20.0% |
| ! | AACATTGAAGAGTTCTATTT+GGG | - | chr2.1:24139351-24139370 | None:intergenic | 25.0% |
| ! | ACAGTATATAAAACATCAAC+TGG | - | chr2.1:24139217-24139236 | None:intergenic | 25.0% |
| ! | ACGAAAATGGAAAAAGTAAA+AGG | - | chr2.1:24139005-24139024 | None:intergenic | 25.0% |
| ! | AGAATTATTTAACAGAACGT+AGG | - | chr2.1:24139676-24139695 | None:intergenic | 25.0% |
| ! | CTATCAATGGTAGAATTTAA+GGG | + | chr2.1:24139726-24139745 | MS.gene070724:intron | 25.0% |
| ! | GAAAAAAGAGATGAATAGTT+TGG | - | chr2.1:24139818-24139837 | None:intergenic | 25.0% |
| ! | GAAAAAGAACTTCCTATTAT+TGG | - | chr2.1:24140025-24140044 | None:intergenic | 25.0% |
| ! | GTAATGTGATTACAAGAATT+AGG | + | chr2.1:24138358-24138377 | MS.gene070724:intron | 25.0% |
| ! | TAAAAATTGTTATGCATGTG+GGG | + | chr2.1:24138004-24138023 | MS.gene070724:intron | 25.0% |
| ! | TAGATCGTCATCAATAATAA+AGG | - | chr2.1:24138891-24138910 | None:intergenic | 25.0% |
| ! | TTACTAGTGTTCTTCAATAA+TGG | + | chr2.1:24139381-24139400 | MS.gene070724:intron | 25.0% |
| !! | AAAATATAACTTGCATGCAA+TGG | - | chr2.1:24140056-24140075 | None:intergenic | 25.0% |
| !! | CATATTAGATGCTTTATTGA+AGG | + | chr2.1:24140081-24140100 | MS.gene070724:intron | 25.0% |
| !! | TTCTATTTGGGATATTAATC+TGG | - | chr2.1:24139339-24139358 | None:intergenic | 25.0% |
| !!! | AATCAAAATCATTTTTGCAG+TGG | - | chr2.1:24139766-24139785 | None:intergenic | 25.0% |
| !!! | GATTTAATTCCTTTTTAAGC+GGG | - | chr2.1:24139939-24139958 | None:intergenic | 25.0% |
| !!! | TGAATTTTTAAGGGTAGTTT+TGG | + | chr2.1:24138656-24138675 | MS.gene070724:intron | 25.0% |
| AATTGAATTCACTGTTAACC+TGG | + | chr2.1:24139883-24139902 | MS.gene070724:intron | 30.0% | |
| ACTCTTCAATGTTCAACTAT+AGG | + | chr2.1:24139358-24139377 | MS.gene070724:intron | 30.0% | |
| AGTGACAACATTTGAAAAAC+TGG | + | chr2.1:24141000-24141019 | MS.gene070724:intron | 30.0% | |
| ATTATGTGTATCTAGGTGTT+TGG | + | chr2.1:24138247-24138266 | MS.gene070724:intron | 30.0% | |
| ATTTCAGATGAATTTGCCTT+TGG | + | chr2.1:24140869-24140888 | MS.gene070724:CDS | 30.0% | |
| CAATGATTCTCCAAATCAAA+AGG | + | chr2.1:24138089-24138108 | MS.gene070724:intron | 30.0% | |
| GAACATTGAAGAGTTCTATT+TGG | - | chr2.1:24139352-24139371 | None:intergenic | 30.0% | |
| GAATTCAATTCAGTGCTTTA+AGG | - | chr2.1:24139873-24139892 | None:intergenic | 30.0% | |
| GCTATCAATGGTAGAATTTA+AGG | + | chr2.1:24139725-24139744 | MS.gene070724:intron | 30.0% | |
| GGGTGAAAGGAAAAAAAATA+TGG | + | chr2.1:24138563-24138582 | MS.gene070724:intron | 30.0% | |
| GTGACAACATTTGAAAAACT+GGG | + | chr2.1:24141001-24141020 | MS.gene070724:intron | 30.0% | |
| TACTCCAAGCAATACTTATT+AGG | + | chr2.1:24139191-24139210 | MS.gene070724:intron | 30.0% | |
| TTGCTACAATGTCCAATAAT+AGG | + | chr2.1:24140010-24140029 | MS.gene070724:intron | 30.0% | |
| ! | AGTGTTCTTCAATAATGGAA+TGG | + | chr2.1:24139386-24139405 | MS.gene070724:intron | 30.0% |
| ! | GCATGCAAGTTATATTTTGT+TGG | + | chr2.1:24140058-24140077 | MS.gene070724:intron | 30.0% |
| !! | ATCCGTGAGAAATATTTTGA+GGG | + | chr2.1:24138527-24138546 | MS.gene070724:intron | 30.0% |
| !! | ATTGATGACGATCTATAAAC+TGG | + | chr2.1:24138896-24138915 | MS.gene070724:intron | 30.0% |
| !! | GTTTCTAGTAACTGATTCAA+TGG | + | chr2.1:24139558-24139577 | MS.gene070724:intron | 30.0% |
| !!! | AACAGTATTGATTGCCATTT+TGG | - | chr2.1:24139158-24139177 | None:intergenic | 30.0% |
| !!! | TTTTAGGTTTGGACTTTTGA+GGG | + | chr2.1:24138589-24138608 | MS.gene070724:intron | 30.0% |
| !!! | TTTTTAGGTTTGGACTTTTG+AGG | + | chr2.1:24138588-24138607 | MS.gene070724:intron | 30.0% |
| AAAGCTCTTTGTAATGAAGC+TGG | + | chr2.1:24137772-24137791 | MS.gene070724:CDS | 35.0% | |
| AAATGTTGTCACTACTTACC+TGG | - | chr2.1:24140993-24141012 | None:intergenic | 35.0% | |
| AAGAAATATCACGGGAAGTA+AGG | - | chr2.1:24138788-24138807 | None:intergenic | 35.0% | |
| ACCATTAGGATTTACAGCAT+GGG | - | chr2.1:24140381-24140400 | None:intergenic | 35.0% | |
| ACCTGAATTCATATTGTTGC+AGG | + | chr2.1:24141103-24141122 | MS.gene070724:intron | 35.0% | |
| ACCTGCAACAATATGAATTC+AGG | - | chr2.1:24141107-24141126 | None:intergenic | 35.0% | |
| AGCACTAAAGATTCTCTCTA+TGG | + | chr2.1:24138473-24138492 | MS.gene070724:intron | 35.0% | |
| CACCAAAGACAAAAAGATGT+TGG | + | chr2.1:24139623-24139642 | MS.gene070724:intron | 35.0% | |
| CTATTGAGGACAAACAAAAC+TGG | - | chr2.1:24138958-24138977 | None:intergenic | 35.0% | |
| CTCTGTGAATTAAAAGTGAC+AGG | + | chr2.1:24139107-24139126 | MS.gene070724:intron | 35.0% | |
| GACTGTATATACTGATCTAC+AGG | + | chr2.1:24139980-24139999 | MS.gene070724:intron | 35.0% | |
| GATCTATAAACTGGAAAGAG+TGG | + | chr2.1:24138905-24138924 | MS.gene070724:intron | 35.0% | |
| GATTCTCCAAATCAAAAGGA+CGG | + | chr2.1:24138093-24138112 | MS.gene070724:intron | 35.0% | |
| GTTGAGTACGTGTGTTTAAA+GGG | + | chr2.1:24139069-24139088 | MS.gene070724:intron | 35.0% | |
| TCATTGTTGTCGCAATGTTT+CGG | - | chr2.1:24137745-24137764 | None:intergenic | 35.0% | |
| TTGAGTACGTGTGTTTAAAG+GGG | + | chr2.1:24139070-24139089 | MS.gene070724:intron | 35.0% | |
| ! | ACAATTTCGATCAGAAGTGT+AGG | - | chr2.1:24138144-24138163 | None:intergenic | 35.0% |
| ! | GACCAACATCTTTTTGTCTT+TGG | - | chr2.1:24139628-24139647 | None:intergenic | 35.0% |
| ! | GATCCGTGAGAAATATTTTG+AGG | + | chr2.1:24138526-24138545 | MS.gene070724:intron | 35.0% |
| ! | GGAGTATTAGTACAGTTTGA+GGG | + | chr2.1:24139529-24139548 | MS.gene070724:intron | 35.0% |
| ! | TACTAATCCATTTGGCTTCA+GGG | + | chr2.1:24140730-24140749 | MS.gene070724:CDS | 35.0% |
| ! | TAGATTTTTGCATCATAGCC+AGG | - | chr2.1:24139904-24139923 | None:intergenic | 35.0% |
| ! | TCTGAAATAGCTTCAGACAT+TGG | - | chr2.1:24140857-24140876 | None:intergenic | 35.0% |
| ! | TTAGCAACTAATGGATCGAT+AGG | - | chr2.1:24140130-24140149 | None:intergenic | 35.0% |
| !! | AGGAGTATTAGTACAGTTTG+AGG | + | chr2.1:24139528-24139547 | MS.gene070724:intron | 35.0% |
| !! | CTTTTTCCGTCCTTTTGATT+TGG | - | chr2.1:24138102-24138121 | None:intergenic | 35.0% |
| !! | GATGAATAGTTTGGAGCTTT+TGG | - | chr2.1:24139809-24139828 | None:intergenic | 35.0% |
| !! | TCCGTGAGAAATATTTTGAG+GGG | + | chr2.1:24138528-24138547 | MS.gene070724:intron | 35.0% |
| !!! | AAGGGTAGTTTTGGTAGTTT+AGG | + | chr2.1:24138665-24138684 | MS.gene070724:intron | 35.0% |
| !!! | CAGTTTTGTTTGTCCTCAAT+AGG | + | chr2.1:24138956-24138975 | MS.gene070724:intron | 35.0% |
| !!! | CTTCTTTTTTTAGGAGGTTG+CGG | + | chr2.1:24138805-24138824 | MS.gene070724:intron | 35.0% |
| !!! | GCTGCGTTTAATGTTACTTT+TGG | + | chr2.1:24138304-24138323 | MS.gene070724:intron | 35.0% |
| !!! | TTTCTTTTTTTAGGACTCGC+CGG | + | chr2.1:24138389-24138408 | MS.gene070724:intron | 35.0% |
| AAAGGAAAGAAACCCAACCA+AGG | - | chr2.1:24138987-24139006 | None:intergenic | 40.0% | |
| AACCAAGGAAAGTCCTATTG+AGG | - | chr2.1:24138972-24138991 | None:intergenic | 40.0% | |
| AATATATAGCTGGGGAAGCT+TGG | - | chr2.1:24140468-24140487 | None:intergenic | 40.0% | |
| ACATTCTTGCCCGCTTAAAA+AGG | + | chr2.1:24139927-24139946 | MS.gene070724:intron | 40.0% | |
| ACTCCTACAAATGTCAGAGT+GGG | - | chr2.1:24139500-24139519 | None:intergenic | 40.0% | |
| ACTCTGACATTTGTAGGAGT+AGG | + | chr2.1:24139500-24139519 | MS.gene070724:intron | 40.0% | |
| AGCCAGTGTGAATATATAGC+TGG | - | chr2.1:24140478-24140497 | None:intergenic | 40.0% | |
| AGGAGAGAGAGAATAACAAG+AGG | + | chr2.1:24137647-24137666 | MS.gene070724:CDS | 40.0% | |
| AGGGAATTTCCATCACCATT+AGG | - | chr2.1:24140395-24140414 | None:intergenic | 40.0% | |
| AGTGTCATGTGCTATATTGC+TGG | - | chr2.1:24138048-24138067 | None:intergenic | 40.0% | |
| ATGGAAATTCCCTCATTCCA+TGG | + | chr2.1:24140402-24140421 | MS.gene070724:CDS | 40.0% | |
| ATTTGTAGGAGTAGGACTGT+AGG | + | chr2.1:24139508-24139527 | MS.gene070724:intron | 40.0% | |
| CAATAGGACTTTCCTTGGTT+GGG | + | chr2.1:24138972-24138991 | MS.gene070724:intron | 40.0% | |
| CAATGGTAGAATTTAAGGGC+TGG | + | chr2.1:24139730-24139749 | MS.gene070724:intron | 40.0% | |
| CACCATTAGGATTTACAGCA+TGG | - | chr2.1:24140382-24140401 | None:intergenic | 40.0% | |
| CATCTGATCCAGAATCTTCA+TGG | - | chr2.1:24140940-24140959 | None:intergenic | 40.0% | |
| CATTGCATGGTACTCTGATT+TGG | + | chr2.1:24138748-24138767 | MS.gene070724:intron | 40.0% | |
| CCAGTGTGAATATATAGCTG+GGG | - | chr2.1:24140476-24140495 | None:intergenic | 40.0% | |
| CTAGTCGCTACTAATCCATT+TGG | + | chr2.1:24140722-24140741 | MS.gene070724:CDS | 40.0% | |
| CTCTTTGTAATGAAGCTGGT+TGG | + | chr2.1:24137776-24137795 | MS.gene070724:CDS | 40.0% | |
| CTGACATGGTAAGATGAACA+CGG | - | chr2.1:24140299-24140318 | None:intergenic | 40.0% | |
| GCCAGTGTGAATATATAGCT+GGG | - | chr2.1:24140477-24140496 | None:intergenic | 40.0% | |
| GCCCCTCAAAATATTTCTCA+CGG | - | chr2.1:24138532-24138551 | None:intergenic | 40.0% | |
| GCTGTAAATCCTAATGGTGA+TGG | + | chr2.1:24140383-24140402 | MS.gene070724:CDS | 40.0% | |
| GGTAGTTTAGGTGTGTGATT+TGG | + | chr2.1:24138677-24138696 | MS.gene070724:intron | 40.0% | |
| GGTTGAGTACGTGTGTTTAA+AGG | + | chr2.1:24139068-24139087 | MS.gene070724:intron | 40.0% | |
| GTTCCCATACATTCTCAAAC+CGG | - | chr2.1:24137713-24137732 | None:intergenic | 40.0% | |
| TACTCCTACAAATGTCAGAG+TGG | - | chr2.1:24139501-24139520 | None:intergenic | 40.0% | |
| TCAATAGGACTTTCCTTGGT+TGG | + | chr2.1:24138971-24138990 | MS.gene070724:intron | 40.0% | |
| TCCCATGCTGTAAATCCTAA+TGG | + | chr2.1:24140377-24140396 | MS.gene070724:CDS | 40.0% | |
| TCTGTCTACACTGATACACT+CGG | - | chr2.1:24138276-24138295 | None:intergenic | 40.0% | |
| TGACATGGTAAGATGAACAC+GGG | - | chr2.1:24140298-24140317 | None:intergenic | 40.0% | |
| TGAGTACGTGTGTTTAAAGG+GGG | + | chr2.1:24139071-24139090 | MS.gene070724:intron | 40.0% | |
| TGATGGTACAACGTATCGTA+AGG | + | chr2.1:24137810-24137829 | MS.gene070724:CDS | 40.0% | |
| TTACGATACGTTGTACCATC+AGG | - | chr2.1:24137811-24137830 | None:intergenic | 40.0% | |
| ! | CTACTAATCCATTTGGCTTC+AGG | + | chr2.1:24140729-24140748 | MS.gene070724:CDS | 40.0% |
| ! | CTGGCCTAATAAGTATTGCT+TGG | - | chr2.1:24139198-24139217 | None:intergenic | 40.0% |
| ! | GATGATTTAGAGCTCACTCT+TGG | + | chr2.1:24140956-24140975 | MS.gene070724:CDS | 40.0% |
| ! | TATTTGGCAGAAGCTTTTGC+AGG | + | chr2.1:24138725-24138744 | MS.gene070724:intron | 40.0% |
| ! | TCTCCGGTTTGAGAATGTAT+GGG | + | chr2.1:24137707-24137726 | MS.gene070724:CDS | 40.0% |
| ! | TTCTCCGGTTTGAGAATGTA+TGG | + | chr2.1:24137706-24137725 | MS.gene070724:CDS | 40.0% |
| !! | CAAATGGATTAGTAGCGACT+AGG | - | chr2.1:24140724-24140743 | None:intergenic | 40.0% |
| !! | CAGTGCTTTAAGGCTTGTTT+GGG | - | chr2.1:24139863-24139882 | None:intergenic | 40.0% |
| !! | GTTTTTGAGCCATGGAATGA+GGG | - | chr2.1:24140414-24140433 | None:intergenic | 40.0% |
| !! | TCAGTGCTTTAAGGCTTGTT+TGG | - | chr2.1:24139864-24139883 | None:intergenic | 40.0% |
| !! | TTGCTGAGCTTGTTGCTATT+TGG | + | chr2.1:24138709-24138728 | MS.gene070724:intron | 40.0% |
| AACATGTCCCACTTTGTCCA+GGG | - | chr2.1:24140793-24140812 | None:intergenic | 45.0% | |
| ACCAATCTGGGTCAAGAACT+TGG | - | chr2.1:24140652-24140671 | None:intergenic | 45.0% | |
| ATAGCAGCGAAGATCTTCTC+CGG | + | chr2.1:24137691-24137710 | MS.gene070724:CDS | 45.0% | |
| ATTAGTAGCGACTAGGCTGA+AGG | - | chr2.1:24140717-24140736 | None:intergenic | 45.0% | |
| CCCCAGCTATATATTCACAC+TGG | + | chr2.1:24140473-24140492 | MS.gene070724:CDS | 45.0% | |
| CTCCTACAAATGTCAGAGTG+GGG | - | chr2.1:24139499-24139518 | None:intergenic | 45.0% | |
| GAGAGGATCCATGAAGATTC+TGG | + | chr2.1:24140929-24140948 | MS.gene070724:CDS | 45.0% | |
| GCTTCACGCTTAAAAGCGAA+AGG | - | chr2.1:24138456-24138475 | None:intergenic | 45.0% | |
| GTCCTCAATAGGACTTTCCT+TGG | + | chr2.1:24138967-24138986 | MS.gene070724:intron | 45.0% | |
| TGATCCCAGCAAACCAATCT+GGG | - | chr2.1:24140664-24140683 | None:intergenic | 45.0% | |
| TGGCTCAAAAACCTCTCATC+TGG | + | chr2.1:24140422-24140441 | MS.gene070724:CDS | 45.0% | |
| TGTAGGTGCTAAAGAGCTCT+CGG | - | chr2.1:24138127-24138146 | None:intergenic | 45.0% | |
| TTCCCCACTCTGACATTTGT+AGG | + | chr2.1:24139494-24139513 | MS.gene070724:intron | 45.0% | |
| ! | CACTACTTACCTGGTCTTTG+AGG | - | chr2.1:24140984-24141003 | None:intergenic | 45.0% |
| ! | CTGATGATGATCCAGATGAG+AGG | - | chr2.1:24140436-24140455 | None:intergenic | 45.0% |
| ! | GTGATAGGTGGTTCTGCAAT+GGG | + | chr2.1:24140269-24140288 | MS.gene070724:CDS | 45.0% |
| ! | TGTGATAGGTGGTTCTGCAA+TGG | + | chr2.1:24140268-24140287 | MS.gene070724:CDS | 45.0% |
| ! | TTAAGGCTTGTTTGGGAGGA+CGG | - | chr2.1:24139856-24139875 | None:intergenic | 45.0% |
| ! | TTCAGGGAAGAGGTTTTCTG+TGG | + | chr2.1:24140746-24140765 | MS.gene070724:CDS | 45.0% |
| !! | AAGCTTTTGCAGGCATTGCA+TGG | + | chr2.1:24138735-24138754 | MS.gene070724:intron | 45.0% |
| !! | AGTTGGTTTGGTGAAGCCTT+GGG | + | chr2.1:24140901-24140920 | MS.gene070724:CDS | 45.0% |
| !! | GATGAGAGGTTTTTGAGCCA+TGG | - | chr2.1:24140422-24140441 | None:intergenic | 45.0% |
| !! | GGTTTTTGAGCCATGGAATG+AGG | - | chr2.1:24140415-24140434 | None:intergenic | 45.0% |
| !! | TGCTTTAAGGCTTGTTTGGG+AGG | - | chr2.1:24139860-24139879 | None:intergenic | 45.0% |
| !! | TTGACCCAGATTGGTTTGCT+GGG | + | chr2.1:24140657-24140676 | MS.gene070724:CDS | 45.0% |
| AAGGAAGAAGAGCCAGGACT+TGG | - | chr2.1:24140341-24140360 | None:intergenic | 50.0% | |
| ACATGTCCCACTTTGTCCAG+GGG | - | chr2.1:24140792-24140811 | None:intergenic | 50.0% | |
| ACCAACTGCACTGCTTCCAA+AGG | - | chr2.1:24140888-24140907 | None:intergenic | 50.0% | |
| ACCTCTTCCCTGAAGCCAAA+TGG | - | chr2.1:24140740-24140759 | None:intergenic | 50.0% | |
| AGGAAGAAGAGCCAGGACTT+GGG | - | chr2.1:24140340-24140359 | None:intergenic | 50.0% | |
| AGGATCAGTCTACTCGTCCT+GGG | + | chr2.1:24140570-24140589 | MS.gene070724:CDS | 50.0% | |
| ATCACATCCATGCGTTCTGC+AGG | - | chr2.1:24140254-24140273 | None:intergenic | 50.0% | |
| CGACCAGATCTAACGTACAC+CGG | - | chr2.1:24138411-24138430 | None:intergenic | 50.0% | |
| CGGTGTACGTTAGATCTGGT+CGG | + | chr2.1:24138409-24138428 | MS.gene070724:intron | 50.0% | |
| CTCTTGGTACCTCAAAGACC+AGG | + | chr2.1:24140972-24140991 | MS.gene070724:CDS | 50.0% | |
| CTGATCCCAGCAAACCAATC+TGG | - | chr2.1:24140665-24140684 | None:intergenic | 50.0% | |
| GAACATGTCCCACTTTGTCC+AGG | - | chr2.1:24140794-24140813 | None:intergenic | 50.0% | |
| GAACGCATGGATGTGATAGG+TGG | + | chr2.1:24140257-24140276 | MS.gene070724:CDS | 50.0% | |
| GCAGAACGCATGGATGTGAT+AGG | + | chr2.1:24140254-24140273 | MS.gene070724:CDS | 50.0% | |
| GCATAGATCTCGAGGGTGAA+AGG | + | chr2.1:24138550-24138569 | MS.gene070724:intron | 50.0% | |
| GCCAAGTTCTTGACCCAGAT+TGG | + | chr2.1:24140648-24140667 | MS.gene070724:CDS | 50.0% | |
| GGTGTACGTTAGATCTGGTC+GGG | + | chr2.1:24138410-24138429 | MS.gene070724:intron | 50.0% | |
| GTGTACGTTAGATCTGGTCG+GGG | + | chr2.1:24138411-24138430 | MS.gene070724:intron | 50.0% | |
| TGGAAGCAGTGCAGTTGGTT+TGG | + | chr2.1:24140889-24140908 | MS.gene070724:CDS | 50.0% | |
| TTCTCTCTCTCCTTCCACGT+TGG | - | chr2.1:24137640-24137659 | None:intergenic | 50.0% | |
| TTTACAGCATGGGATGAGCG+CGG | - | chr2.1:24140371-24140390 | None:intergenic | 50.0% | |
| ! | ACTTGGGTTGTAGGAAGCAC+AGG | - | chr2.1:24140324-24140343 | None:intergenic | 50.0% |
| ! | CTTGGGTTGTAGGAAGCACA+GGG | - | chr2.1:24140323-24140342 | None:intergenic | 50.0% |
| ! | CTTGTTTGGGAGGACGGTTT+TGG | - | chr2.1:24139850-24139869 | None:intergenic | 50.0% |
| ! | TCCATTTGGCTTCAGGGAAG+AGG | + | chr2.1:24140736-24140755 | MS.gene070724:CDS | 50.0% |
| ! | TGTTCTCCAGCTTTAGCTGC+AGG | + | chr2.1:24140809-24140828 | MS.gene070724:CDS | 50.0% |
| ! | TTGAGGGGCATAGATCTCGA+GGG | + | chr2.1:24138543-24138562 | MS.gene070724:intron | 50.0% |
| ! | TTTGAGGGGCATAGATCTCG+AGG | + | chr2.1:24138542-24138561 | MS.gene070724:intron | 50.0% |
| !! | CAGATTGGTTTGCTGGGATC+AGG | + | chr2.1:24140663-24140682 | MS.gene070724:CDS | 50.0% |
| !! | CAGTTGGTTTGGTGAAGCCT+TGG | + | chr2.1:24140900-24140919 | MS.gene070724:CDS | 50.0% |
| !! | CTTGACCCAGATTGGTTTGC+TGG | + | chr2.1:24140656-24140675 | MS.gene070724:CDS | 50.0% |
| ACCCCAGAGGAAAGCTGACT+GGG | + | chr2.1:24140547-24140566 | MS.gene070724:CDS | 55.0% | |
| AGGAGAAGTTTGCCCGCTGT+GGG | - | chr2.1:24140693-24140712 | None:intergenic | 55.0% | |
| ATCAGTCTACTCGTCCTGGG+TGG | + | chr2.1:24140573-24140592 | MS.gene070724:CDS | 55.0% | |
| ATGCAAGCCTGCAGAACGCA+TGG | + | chr2.1:24140244-24140263 | MS.gene070724:CDS | 55.0% | |
| ATGTGGACCCCTGGACAAAG+TGG | + | chr2.1:24140782-24140801 | MS.gene070724:CDS | 55.0% | |
| CGAGCAGTTGGAGAGCTAAG+TGG | - | chr2.1:24140524-24140543 | None:intergenic | 55.0% | |
| CTAGGGAAGGAAGAAGAGCC+AGG | - | chr2.1:24140347-24140366 | None:intergenic | 55.0% | |
| CTCCCAGTCAGCTTTCCTCT+GGG | - | chr2.1:24140552-24140571 | None:intergenic | 55.0% | |
| GAGCTAAGTGGAGGAGTGAC+AGG | - | chr2.1:24140512-24140531 | None:intergenic | 55.0% | |
| GAGGATCAGTCTACTCGTCC+TGG | + | chr2.1:24140569-24140588 | MS.gene070724:CDS | 55.0% | |
| GCAGTTGGAGAGCTAAGTGG+AGG | - | chr2.1:24140521-24140540 | None:intergenic | 55.0% | |
| GCTTCCTACAACCCAAGTCC+TGG | + | chr2.1:24140326-24140345 | MS.gene070724:CDS | 55.0% | |
| GGTCAAGAACTTGGCGACCA+GGG | - | chr2.1:24140643-24140662 | None:intergenic | 55.0% | |
| GGTTGGATCGTTGAGCCTGA+TGG | + | chr2.1:24137793-24137812 | MS.gene070724:CDS | 55.0% | |
| GTAGCGACTAGGCTGAAGGT+AGG | - | chr2.1:24140713-24140732 | None:intergenic | 55.0% | |
| TAGCTGGGGAAGCTTGGAAG+AGG | - | chr2.1:24140462-24140481 | None:intergenic | 55.0% | |
| TAGGAGAAGTTTGCCCGCTG+TGG | - | chr2.1:24140694-24140713 | None:intergenic | 55.0% | |
| TCAGAGCCTGCAGCTAAAGC+TGG | - | chr2.1:24140818-24140837 | None:intergenic | 55.0% | |
| TCAGTCTACTCGTCCTGGGT+GGG | + | chr2.1:24140574-24140593 | MS.gene070724:CDS | 55.0% | |
| TCCCAGTCAGCTTTCCTCTG+GGG | - | chr2.1:24140551-24140570 | None:intergenic | 55.0% | |
| TCGCCGGTGTACGTTAGATC+TGG | + | chr2.1:24138405-24138424 | MS.gene070724:intron | 55.0% | |
| TGAAGCCTTGGGAAGGAGAG+AGG | + | chr2.1:24140912-24140931 | MS.gene070724:CDS | 55.0% | |
| TGGATCCTCTCTCCTTCCCA+AGG | - | chr2.1:24140920-24140939 | None:intergenic | 55.0% | |
| TGTGGACCCCTGGACAAAGT+GGG | + | chr2.1:24140783-24140802 | MS.gene070724:CDS | 55.0% | |
| TTACAGCATGGGATGAGCGC+GGG | - | chr2.1:24140370-24140389 | None:intergenic | 55.0% | |
| TTTGTCCAGGGGTCCACATG+CGG | - | chr2.1:24140781-24140800 | None:intergenic | 55.0% | |
| ! | AGAGCCAGGACTTGGGTTGT+AGG | - | chr2.1:24140333-24140352 | None:intergenic | 55.0% |
| ! | AGGAAGCACAGGGACTGACA+TGG | - | chr2.1:24140313-24140332 | None:intergenic | 55.0% |
| ! | GCCTTTGGAAGCAGTGCAGT+TGG | + | chr2.1:24140884-24140903 | MS.gene070724:CDS | 55.0% |
| !! | AGGAGTGACAGGAGCACTGA+TGG | - | chr2.1:24140501-24140520 | None:intergenic | 55.0% |
| !! | GGTTTGGTGAAGCCTTGGGA+AGG | + | chr2.1:24140905-24140924 | MS.gene070724:CDS | 55.0% |
| AGAACTTGGCGACCAGGGCT+AGG | - | chr2.1:24140638-24140657 | None:intergenic | 60.0% | |
| CAACTGCTCGATCACCCCAG+AGG | + | chr2.1:24140534-24140553 | MS.gene070724:CDS | 60.0% | |
| CACCCCAGAGGAAAGCTGAC+TGG | + | chr2.1:24140546-24140565 | MS.gene070724:CDS | 60.0% | |
| CAGTCTACTCGTCCTGGGTG+GGG | + | chr2.1:24140575-24140594 | MS.gene070724:CDS | 60.0% | |
| CCAGAGGAAAGCTGACTGGG+AGG | + | chr2.1:24140550-24140569 | MS.gene070724:CDS | 60.0% | |
| CCTCCCAGTCAGCTTTCCTC+TGG | - | chr2.1:24140553-24140572 | None:intergenic | 60.0% | |
| GACGAGGCAACCAACGTGGA+AGG | + | chr2.1:24137627-24137646 | MS.gene070724:CDS | 60.0% | |
| GGAGAAGTTTGCCCGCTGTG+GGG | - | chr2.1:24140692-24140711 | None:intergenic | 60.0% | |
| GGGTCAAGAACTTGGCGACC+AGG | - | chr2.1:24140644-24140663 | None:intergenic | 60.0% | |
| GTGGCAGTGATTCCCGCATG+TGG | + | chr2.1:24140765-24140784 | MS.gene070724:CDS | 60.0% | |
| TAGGAGGAGTGGAGGAAGGC+TGG | - | chr2.1:24140619-24140638 | None:intergenic | 60.0% | |
| TCTGGTCGGGGTAGTGTCTG+AGG | + | chr2.1:24138423-24138442 | MS.gene070724:intron | 60.0% | |
| TTGTCCAGGGGTCCACATGC+GGG | - | chr2.1:24140780-24140799 | None:intergenic | 60.0% | |
| !! | CTCTGGGGTGATCGAGCAGT+TGG | - | chr2.1:24140536-24140555 | None:intergenic | 60.0% |
| ACCAGGGCTAGGAGGAGTGG+AGG | - | chr2.1:24140627-24140646 | None:intergenic | 65.0% | |
| ACTTGGCGACCAGGGCTAGG+AGG | - | chr2.1:24140635-24140654 | None:intergenic | 65.0% | |
| CTACTCGTCCTGGGTGGGGT+GGG | + | chr2.1:24140579-24140598 | MS.gene070724:CDS | 65.0% | |
| GATTCCCGCATGTGGACCCC+TGG | + | chr2.1:24140773-24140792 | MS.gene070724:CDS | 65.0% | |
| GGATCAGGATGCCCCACAGC+GGG | + | chr2.1:24140678-24140697 | MS.gene070724:CDS | 65.0% | |
| GGGATCAGGATGCCCCACAG+CGG | + | chr2.1:24140677-24140696 | MS.gene070724:CDS | 65.0% | |
| GGGCTAGGAGGAGTGGAGGA+AGG | - | chr2.1:24140623-24140642 | None:intergenic | 65.0% | |
| TCCTCCACTCCTCCTAGCCC+TGG | + | chr2.1:24140623-24140642 | MS.gene070724:CDS | 65.0% | |
| TCTACTCGTCCTGGGTGGGG+TGG | + | chr2.1:24140578-24140597 | MS.gene070724:CDS | 65.0% | |
| ! | CATGGGATGAGCGCGGGCTA+GGG | - | chr2.1:24140364-24140383 | None:intergenic | 65.0% |
| CGGGGACGAGGCAACCAACG+TGG | + | chr2.1:24137623-24137642 | MS.gene070724:CDS | 70.0% | |
| GCATGGGATGAGCGCGGGCT+AGG | - | chr2.1:24140365-24140384 | None:intergenic | 70.0% | |
| GCGACCAGGGCTAGGAGGAG+TGG | - | chr2.1:24140630-24140649 | None:intergenic | 70.0% | |
| TACTGCTGCCCACCCCACCC+AGG | - | chr2.1:24140590-24140609 | None:intergenic | 70.0% | |
| !! | GGATGAGCGCGGGCTAGGGA+AGG | - | chr2.1:24140360-24140379 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 24137616 | 24141128 | 24137616 | ID=MS.gene070724 |
| chr2.1 | mRNA | 24137616 | 24141128 | 24137616 | ID=MS.gene070724.t1;Parent=MS.gene070724 |
| chr2.1 | exon | 24137616 | 24137831 | 24137616 | ID=MS.gene070724.t1.exon1;Parent=MS.gene070724.t1 |
| chr2.1 | CDS | 24137616 | 24137831 | 24137616 | ID=cds.MS.gene070724.t1;Parent=MS.gene070724.t1 |
| chr2.1 | exon | 24140242 | 24140993 | 24140242 | ID=MS.gene070724.t1.exon2;Parent=MS.gene070724.t1 |
| chr2.1 | CDS | 24140242 | 24140993 | 24140242 | ID=cds.MS.gene070724.t1;Parent=MS.gene070724.t1 |
| chr2.1 | exon | 24141125 | 24141128 | 24141125 | ID=MS.gene070724.t1.exon3;Parent=MS.gene070724.t1 |
| chr2.1 | CDS | 24141125 | 24141128 | 24141125 | ID=cds.MS.gene070724.t1;Parent=MS.gene070724.t1 |
| Gene Sequence |
| Protein sequence |
