Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene070886.t1 | XP_003612998.1 | 95.9 | 414 | 15 | 1 | 1 | 412 | 2 | 415 | 6.10E-226 | 793.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene070886.t1 | Q9FFN2 | 36.5 | 351 | 207 | 8 | 71 | 411 | 170 | 514 | 6.9e-69 | 262.7 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene070886.t1 | G7KGK1 | 95.9 | 414 | 15 | 1 | 1 | 412 | 2 | 415 | 4.4e-226 | 793.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene070886 | MS.gene58027 | PPI |
MS.gene044280 | MS.gene070886 | PPI |
MS.gene70517 | MS.gene070886 | PPI |
MS.gene25757 | MS.gene070886 | PPI |
MS.gene69756 | MS.gene070886 | PPI |
MS.gene070886 | MS.gene036708 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene070886.t1 | MTR_5g031480 | 97.343 | 414 | 9 | 1 | 1 | 412 | 2 | 415 | 0.0 | 841 |
MS.gene070886.t1 | MTR_5g049790 | 92.961 | 412 | 13 | 2 | 1 | 412 | 40 | 435 | 0.0 | 794 |
MS.gene070886.t1 | MTR_5g031480 | 96.657 | 329 | 9 | 1 | 1 | 327 | 2 | 330 | 0.0 | 662 |
MS.gene070886.t1 | MTR_5g031480 | 96.646 | 328 | 9 | 1 | 1 | 326 | 2 | 329 | 0.0 | 662 |
MS.gene070886.t1 | MTR_5g049790 | 96.831 | 284 | 9 | 0 | 1 | 284 | 40 | 323 | 0.0 | 580 |
MS.gene070886.t1 | MTR_5g049790 | 91.275 | 298 | 9 | 1 | 4 | 284 | 43 | 340 | 0.0 | 562 |
MS.gene070886.t1 | MTR_7g085840 | 43.202 | 331 | 175 | 7 | 87 | 410 | 1 | 325 | 4.05e-91 | 278 |
MS.gene070886.t1 | MTR_7g103260 | 36.522 | 345 | 205 | 6 | 71 | 406 | 52 | 391 | 1.02e-82 | 259 |
MS.gene070886.t1 | MTR_7g103270 | 37.101 | 345 | 203 | 6 | 71 | 406 | 53 | 392 | 1.03e-80 | 254 |
MS.gene070886.t1 | MTR_4g100730 | 35.958 | 381 | 225 | 9 | 39 | 405 | 154 | 529 | 5.01e-80 | 256 |
MS.gene070886.t1 | MTR_1g061760 | 36.522 | 345 | 206 | 6 | 71 | 406 | 138 | 478 | 2.61e-78 | 250 |
MS.gene070886.t1 | MTR_3g106690 | 38.596 | 342 | 191 | 7 | 83 | 411 | 55 | 390 | 2.34e-76 | 242 |
MS.gene070886.t1 | MTR_1g006600 | 36.416 | 346 | 203 | 9 | 70 | 404 | 240 | 579 | 1.32e-74 | 243 |
MS.gene070886.t1 | MTR_1g090733 | 38.643 | 339 | 195 | 7 | 73 | 404 | 208 | 540 | 1.64e-74 | 242 |
MS.gene070886.t1 | MTR_3g110200 | 34.190 | 389 | 235 | 9 | 31 | 404 | 201 | 583 | 2.20e-74 | 243 |
MS.gene070886.t1 | MTR_4g115540 | 34.916 | 358 | 211 | 7 | 65 | 406 | 267 | 618 | 7.99e-74 | 242 |
MS.gene070886.t1 | MTR_4g115530 | 33.903 | 351 | 212 | 6 | 71 | 406 | 39 | 384 | 1.78e-73 | 235 |
MS.gene070886.t1 | MTR_7g103150 | 35.613 | 351 | 209 | 9 | 65 | 404 | 133 | 477 | 7.22e-73 | 236 |
MS.gene070886.t1 | MTR_3g110198 | 36.182 | 351 | 207 | 9 | 65 | 404 | 242 | 586 | 2.76e-72 | 238 |
MS.gene070886.t1 | MTR_3g097310 | 33.618 | 351 | 217 | 6 | 71 | 411 | 146 | 490 | 8.57e-71 | 231 |
MS.gene070886.t1 | MTR_4g115530 | 34.030 | 335 | 201 | 6 | 87 | 406 | 1 | 330 | 7.14e-70 | 224 |
MS.gene070886.t1 | MTR_3g081240 | 35.549 | 346 | 207 | 6 | 71 | 406 | 101 | 440 | 7.84e-69 | 224 |
MS.gene070886.t1 | MTR_4g115460 | 35.211 | 355 | 210 | 9 | 71 | 411 | 113 | 461 | 6.44e-68 | 223 |
MS.gene070886.t1 | MTR_3g080690 | 34.393 | 346 | 211 | 6 | 71 | 406 | 99 | 438 | 1.40e-67 | 221 |
MS.gene070886.t1 | MTR_8g102840 | 34.104 | 346 | 212 | 7 | 70 | 404 | 262 | 602 | 4.54e-65 | 219 |
MS.gene070886.t1 | MTR_4g115540 | 32.364 | 275 | 164 | 7 | 65 | 323 | 267 | 535 | 2.45e-41 | 153 |
MS.gene070886.t1 | MTR_8g102840 | 32.955 | 264 | 161 | 7 | 70 | 322 | 262 | 520 | 8.86e-37 | 140 |
MS.gene070886.t1 | MTR_4g057500 | 27.429 | 350 | 209 | 11 | 89 | 403 | 105 | 444 | 9.51e-32 | 125 |
MS.gene070886.t1 | MTR_2g084245 | 25.989 | 354 | 215 | 9 | 86 | 403 | 84 | 426 | 1.23e-29 | 119 |
MS.gene070886.t1 | MTR_8g096160 | 28.977 | 352 | 196 | 13 | 90 | 403 | 49 | 384 | 3.70e-29 | 118 |
MS.gene070886.t1 | MTR_8g096140 | 26.730 | 419 | 226 | 15 | 26 | 403 | 6 | 384 | 1.62e-28 | 116 |
MS.gene070886.t1 | MTR_5g081290 | 32.237 | 152 | 89 | 2 | 87 | 238 | 1 | 138 | 7.81e-23 | 97.4 |
MS.gene070886.t1 | MTR_5g081290 | 30.081 | 123 | 70 | 4 | 296 | 412 | 141 | 253 | 1.80e-13 | 70.5 |
MS.gene070886.t1 | MTR_4g084200 | 26.855 | 283 | 174 | 10 | 131 | 389 | 160 | 433 | 1.57e-22 | 99.8 |
MS.gene070886.t1 | MTR_4g084200 | 27.698 | 278 | 167 | 11 | 131 | 384 | 160 | 427 | 9.88e-20 | 90.9 |
MS.gene070886.t1 | MTR_4g084200 | 27.106 | 273 | 168 | 9 | 131 | 380 | 160 | 424 | 1.12e-19 | 90.9 |
MS.gene070886.t1 | MTR_3g085480 | 26.280 | 293 | 180 | 10 | 131 | 399 | 116 | 396 | 1.82e-19 | 90.1 |
MS.gene070886.t1 | MTR_8g080490 | 25.850 | 294 | 180 | 10 | 131 | 399 | 114 | 394 | 9.92e-18 | 85.1 |
MS.gene070886.t1 | MTR_1g029350 | 24.058 | 345 | 226 | 12 | 88 | 403 | 71 | 408 | 5.35e-16 | 79.7 |
MS.gene070886.t1 | MTR_4g077920 | 29.787 | 235 | 142 | 10 | 172 | 389 | 218 | 446 | 2.83e-14 | 74.7 |
MS.gene070886.t1 | MTR_4g077920 | 29.787 | 235 | 142 | 10 | 172 | 389 | 218 | 446 | 3.35e-14 | 74.7 |
MS.gene070886.t1 | MTR_4g077920 | 29.787 | 235 | 142 | 10 | 172 | 389 | 160 | 388 | 3.70e-14 | 74.3 |
MS.gene070886.t1 | MTR_6g027310 | 23.345 | 287 | 194 | 7 | 131 | 399 | 183 | 461 | 3.91e-14 | 74.3 |
MS.gene070886.t1 | MTR_3g037720 | 22.403 | 308 | 198 | 9 | 131 | 412 | 187 | 479 | 7.37e-14 | 73.6 |
MS.gene070886.t1 | MTR_7g087100 | 32.692 | 104 | 67 | 1 | 299 | 399 | 363 | 466 | 3.40e-13 | 71.6 |
MS.gene070886.t1 | MTR_1g097090 | 25.472 | 318 | 181 | 14 | 107 | 388 | 127 | 424 | 1.06e-12 | 69.7 |
MS.gene070886.t1 | MTR_1g097090 | 25.472 | 318 | 181 | 14 | 107 | 388 | 127 | 424 | 1.61e-12 | 69.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene070886.t1 | AT4G38040 | 78.870 | 407 | 76 | 2 | 16 | 412 | 19 | 425 | 0.0 | 680 |
MS.gene070886.t1 | AT4G38040 | 78.515 | 377 | 71 | 3 | 16 | 382 | 19 | 395 | 0.0 | 619 |
MS.gene070886.t1 | AT4G16745 | 36.286 | 350 | 208 | 6 | 68 | 404 | 177 | 524 | 4.16e-80 | 256 |
MS.gene070886.t1 | AT5G03795 | 36.364 | 352 | 208 | 8 | 70 | 411 | 169 | 514 | 1.37e-79 | 254 |
MS.gene070886.t1 | AT5G11610 | 37.912 | 364 | 204 | 10 | 53 | 404 | 185 | 538 | 3.41e-78 | 252 |
MS.gene070886.t1 | AT5G11130 | 35.411 | 353 | 210 | 7 | 71 | 411 | 129 | 475 | 6.21e-73 | 236 |
MS.gene070886.t1 | AT4G16745 | 35.673 | 342 | 205 | 6 | 68 | 396 | 177 | 516 | 7.80e-73 | 239 |
MS.gene070886.t1 | AT5G11130 | 35.608 | 337 | 199 | 7 | 87 | 411 | 1 | 331 | 5.74e-72 | 229 |
MS.gene070886.t1 | AT5G25310 | 35.574 | 357 | 205 | 6 | 71 | 411 | 131 | 478 | 1.04e-71 | 233 |
MS.gene070886.t1 | AT3G07620 | 34.626 | 361 | 215 | 7 | 66 | 411 | 103 | 457 | 1.05e-70 | 230 |
MS.gene070886.t1 | AT4G32790 | 36.735 | 343 | 201 | 8 | 73 | 404 | 249 | 586 | 1.53e-70 | 233 |
MS.gene070886.t1 | AT4G32790 | 36.735 | 343 | 201 | 8 | 73 | 404 | 249 | 586 | 1.53e-70 | 233 |
MS.gene070886.t1 | AT4G32790 | 36.735 | 343 | 201 | 8 | 73 | 404 | 249 | 586 | 1.53e-70 | 233 |
MS.gene070886.t1 | AT5G20260 | 35.043 | 351 | 205 | 8 | 71 | 406 | 117 | 459 | 8.47e-69 | 225 |
MS.gene070886.t1 | AT5G20260 | 35.417 | 336 | 194 | 8 | 86 | 406 | 27 | 354 | 5.87e-68 | 220 |
MS.gene070886.t1 | AT5G25820 | 34.795 | 365 | 214 | 11 | 55 | 404 | 290 | 645 | 1.30e-67 | 226 |
MS.gene070886.t1 | AT5G20260 | 35.224 | 335 | 194 | 8 | 87 | 406 | 1 | 327 | 2.26e-67 | 217 |
MS.gene070886.t1 | AT5G33290 | 33.613 | 357 | 204 | 7 | 73 | 406 | 146 | 492 | 7.83e-67 | 221 |
MS.gene070886.t1 | AT5G37000 | 32.668 | 401 | 247 | 12 | 25 | 411 | 161 | 552 | 1.37e-65 | 219 |
MS.gene070886.t1 | AT5G19670 | 34.111 | 343 | 210 | 7 | 73 | 404 | 263 | 600 | 1.90e-64 | 217 |
MS.gene070886.t1 | AT5G19670 | 34.111 | 343 | 210 | 7 | 73 | 404 | 263 | 600 | 1.90e-64 | 217 |
MS.gene070886.t1 | AT3G42180 | 32.500 | 360 | 218 | 7 | 71 | 411 | 114 | 467 | 2.77e-63 | 211 |
MS.gene070886.t1 | AT3G42180 | 32.456 | 342 | 210 | 6 | 87 | 411 | 1 | 338 | 1.26e-61 | 202 |
MS.gene070886.t1 | AT5G11610 | 36.330 | 267 | 149 | 9 | 53 | 308 | 185 | 441 | 1.12e-44 | 161 |
MS.gene070886.t1 | AT1G27440 | 28.230 | 418 | 222 | 14 | 26 | 403 | 1 | 380 | 4.92e-31 | 123 |
MS.gene070886.t1 | AT5G11610 | 38.776 | 147 | 81 | 3 | 53 | 193 | 185 | 328 | 3.26e-28 | 114 |
MS.gene070886.t1 | AT5G61840 | 26.683 | 416 | 230 | 14 | 23 | 403 | 8 | 383 | 6.52e-28 | 114 |
MS.gene070886.t1 | AT5G22940 | 26.250 | 320 | 199 | 10 | 115 | 404 | 136 | 448 | 2.58e-27 | 113 |
MS.gene070886.t1 | AT5G22940 | 26.250 | 320 | 199 | 10 | 115 | 404 | 165 | 477 | 3.28e-27 | 113 |
MS.gene070886.t1 | AT2G28110 | 24.217 | 351 | 217 | 11 | 91 | 403 | 94 | 433 | 6.80e-24 | 103 |
MS.gene070886.t1 | AT1G67410 | 27.723 | 303 | 189 | 11 | 131 | 412 | 119 | 412 | 1.05e-20 | 94.0 |
MS.gene070886.t1 | AT5G16890 | 31.330 | 233 | 141 | 8 | 172 | 389 | 224 | 452 | 1.65e-20 | 94.0 |
MS.gene070886.t1 | AT1G21480 | 26.224 | 286 | 176 | 10 | 91 | 348 | 89 | 367 | 1.02e-19 | 90.9 |
MS.gene070886.t1 | AT2G35100 | 24.207 | 347 | 218 | 13 | 73 | 389 | 64 | 395 | 1.86e-19 | 90.5 |
MS.gene070886.t1 | AT1G21480 | 26.224 | 286 | 176 | 10 | 91 | 348 | 89 | 367 | 2.35e-19 | 90.1 |
MS.gene070886.t1 | AT5G44930 | 29.787 | 235 | 141 | 8 | 131 | 351 | 126 | 350 | 8.17e-17 | 82.0 |
MS.gene070886.t1 | AT5G44930 | 29.787 | 235 | 141 | 8 | 131 | 351 | 126 | 350 | 1.58e-16 | 81.6 |
MS.gene070886.t1 | AT5G44930 | 29.787 | 235 | 141 | 8 | 131 | 351 | 126 | 350 | 1.58e-16 | 81.6 |
MS.gene070886.t1 | AT3G45400 | 23.506 | 251 | 167 | 7 | 164 | 399 | 192 | 432 | 6.25e-13 | 70.5 |
MS.gene070886.t1 | AT1G74680 | 23.264 | 288 | 194 | 9 | 131 | 399 | 149 | 428 | 1.78e-12 | 69.3 |
MS.gene070886.t1 | AT1G34270 | 27.347 | 245 | 156 | 9 | 165 | 388 | 182 | 425 | 9.01e-11 | 63.9 |
Find 90 sgRNAs with CRISPR-Local
Find 415 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCAGGACTAGTCTTGGATTT+TGG | 0.099215 | 5.4:+21537132 | MS.gene070886:intron |
GGTATTTCTTTCAGAATATT+AGG | 0.147218 | 5.4:+21535033 | MS.gene070886:CDS |
CAGCCATTTGCTCTTCCAGC+TGG | 0.200297 | 5.4:+21536560 | MS.gene070886:CDS |
TGATATCCAAGTATCCTTAT+TGG | 0.235417 | 5.4:+21536369 | MS.gene070886:CDS |
GATGATGTTGGTGATGAATT+TGG | 0.240584 | 5.4:+21534867 | MS.gene070886:CDS |
CAGTCAAGAATATCATTAAA+AGG | 0.337256 | 5.4:-21539952 | None:intergenic |
CACACTCTCTTCTCTCTTCG+TGG | 0.342097 | 5.4:+21534479 | MS.gene070886:CDS |
TCTATCACCTTCACAGTAAC+TGG | 0.343782 | 5.4:-21534822 | None:intergenic |
ATAGCAGATTCTATCCATTA+TGG | 0.344223 | 5.4:+21537335 | MS.gene070886:CDS |
CAGACACCAAGGAAGCTTAC+TGG | 0.353574 | 5.4:+21534993 | MS.gene070886:CDS |
AGCCATTTGCTCTTCCAGCT+GGG | 0.353699 | 5.4:+21536561 | MS.gene070886:CDS |
GAGTTATTCTTGCACGTGTA+TGG | 0.356811 | 5.4:+21537180 | MS.gene070886:CDS |
CCCAGGGTTCTGTTCCAATA+AGG | 0.369371 | 5.4:-21536383 | None:intergenic |
CGCATCTTATGACACGAAAT+AGG | 0.375995 | 5.4:-21535107 | None:intergenic |
GTATTTCTTTCAGAATATTA+GGG | 0.382720 | 5.4:+21535034 | MS.gene070886:CDS |
TGAGTATTTGAGGGAAAGAT+AGG | 0.386304 | 5.4:-21534543 | None:intergenic |
TACTTTCCAGTAAGCTTCCT+TGG | 0.411765 | 5.4:-21534999 | None:intergenic |
TACCAGGTATGCATCCATAA+TGG | 0.418374 | 5.4:-21537349 | None:intergenic |
ACTGTGAAGGTGATAGATTC+AGG | 0.418505 | 5.4:+21534828 | MS.gene070886:CDS |
TTTGTCACTTGTCATGATGT+TGG | 0.423218 | 5.4:+21536419 | MS.gene070886:CDS |
TGAATCCAACATCATAGCTT+GGG | 0.423551 | 5.4:-21536502 | None:intergenic |
TCGGACTCTTGATCCTGATC+AGG | 0.438095 | 5.4:+21535067 | MS.gene070886:CDS |
ATGAAGGGGTTGAGTATTTG+AGG | 0.439361 | 5.4:-21534553 | None:intergenic |
GAGTGAGAATTGCTAGGGTT+AGG | 0.440235 | 5.4:-21534508 | None:intergenic |
GCCATTTGCTCTTCCAGCTG+GGG | 0.445515 | 5.4:+21536562 | MS.gene070886:CDS |
TCTGTTCCAATAAGGATACT+TGG | 0.446102 | 5.4:-21536375 | None:intergenic |
CCATTTGCTCTTCCAGCTGG+GGG | 0.447883 | 5.4:+21536563 | MS.gene070886:CDS |
TGACTGGAGGCGAATTCCAC+TGG | 0.454927 | 5.4:-21540546 | None:intergenic |
ATATGGTTATGTATGACCTC+TGG | 0.456092 | 5.4:+21540584 | MS.gene070886:CDS |
ATGGAATTCTTCACAAGTAA+TGG | 0.456823 | 5.4:-21536464 | None:intergenic |
GTGGTTTGCAGGACTAGTCT+TGG | 0.457735 | 5.4:+21537125 | MS.gene070886:intron |
ATATTAGGGAGAGTCGGTTT+CGG | 0.461762 | 5.4:+21535048 | MS.gene070886:CDS |
AAAGTCTTGGAATCCCCATC+TGG | 0.463244 | 5.4:-21534966 | None:intergenic |
ATACTCAACCCCTTCATCTC+AGG | 0.463717 | 5.4:+21534559 | MS.gene070886:CDS |
TGAAGGGGTTGAGTATTTGA+GGG | 0.465477 | 5.4:-21534552 | None:intergenic |
GCCCGGTAGCTCTACTGATT+CGG | 0.482402 | 5.4:-21537235 | None:intergenic |
AAAGAAGAGTGAGAATTGCT+AGG | 0.482906 | 5.4:-21534514 | None:intergenic |
CAAGCTGAATTTCGCGGAGA+TGG | 0.483296 | 5.4:+21534917 | MS.gene070886:CDS |
TCCTTATTGGAACAGAACCC+TGG | 0.489602 | 5.4:+21536382 | MS.gene070886:CDS |
AGTTATTCTTGCACGTGTAT+GGG | 0.490803 | 5.4:+21537181 | MS.gene070886:CDS |
CAAATGGCTGCAGCACTTGA+GGG | 0.492754 | 5.4:-21536547 | None:intergenic |
ATCCATTATGGATGCATACC+TGG | 0.496661 | 5.4:+21537347 | MS.gene070886:CDS |
CAAGCACTTAGAATCAGTAT+TGG | 0.498525 | 5.4:-21540624 | None:intergenic |
ATGAATCCAACATCATAGCT+TGG | 0.499154 | 5.4:-21536503 | None:intergenic |
AACCGAATCAGTAGAGCTAC+CGG | 0.499250 | 5.4:+21537233 | MS.gene070886:CDS |
AAAATTTGCTGTTGTACTCA+AGG | 0.500391 | 5.4:+21539978 | MS.gene070886:CDS |
GCAAATGGCTGCAGCACTTG+AGG | 0.504210 | 5.4:-21536548 | None:intergenic |
TATATGCCCTGGTGGATCAC+AGG | 0.506862 | 5.4:+21537298 | MS.gene070886:CDS |
TGGGGAGCACACTGCTCGAA+TGG | 0.507644 | 5.4:-21536483 | None:intergenic |
CTTGTCATGATGTTGGTGTA+AGG | 0.509172 | 5.4:+21536426 | MS.gene070886:CDS |
AAGAAGAGTGAGAATTGCTA+GGG | 0.522363 | 5.4:-21534513 | None:intergenic |
GGAGATGGAGAAGAAGTTCA+AGG | 0.526036 | 5.4:+21534932 | MS.gene070886:CDS |
ACTTCATAATAATTTAGTAA+AGG | 0.526267 | 5.4:+21540062 | MS.gene070886:CDS |
AGGTTTATATATATCCAGAT+GGG | 0.530251 | 5.4:+21534952 | MS.gene070886:CDS |
AGTGTTCAAGCTGAATTTCG+CGG | 0.541305 | 5.4:+21534911 | MS.gene070886:CDS |
CAAAGAAGTGATCAGCACCC+AGG | 0.545823 | 5.4:-21536400 | None:intergenic |
AAGGTTTATATATATCCAGA+TGG | 0.547576 | 5.4:+21534951 | MS.gene070886:CDS |
CAAGAATATCATTAAAAGGA+AGG | 0.551765 | 5.4:-21539948 | None:intergenic |
TTCAGAATATTAGGGAGAGT+CGG | 0.552683 | 5.4:+21535042 | MS.gene070886:CDS |
TACTGGAAAGTATGCTAGTG+AGG | 0.561671 | 5.4:+21535010 | MS.gene070886:CDS |
TTAGGTGCCAGTTACTGTGA+AGG | 0.563383 | 5.4:+21534815 | MS.gene070886:intron |
CACGAAGAGAGAAGAGAGTG+TGG | 0.573891 | 5.4:-21534478 | None:intergenic |
TGAAAAGCATCATATCTGAC+TGG | 0.580791 | 5.4:-21540562 | None:intergenic |
TTTGTTTACCTGAGATGAAG+GGG | 0.580822 | 5.4:-21534567 | None:intergenic |
CCTTATTGGAACAGAACCCT+GGG | 0.580833 | 5.4:+21536383 | MS.gene070886:CDS |
CATAATTGTACAAAATTACG+TGG | 0.581618 | 5.4:+21536340 | MS.gene070886:CDS |
CTATTAACCTGTGATCCACC+AGG | 0.581964 | 5.4:-21537305 | None:intergenic |
AAAGAAGTGATCAGCACCCA+GGG | 0.583211 | 5.4:-21536399 | None:intergenic |
TTTCTGGTACACTAGATGCC+CGG | 0.587903 | 5.4:-21537252 | None:intergenic |
CACTTAGAATCAGTATTGGA+TGG | 0.592018 | 5.4:-21540620 | None:intergenic |
ATCAGTATTGGATGGTGTGA+TGG | 0.596872 | 5.4:-21540612 | None:intergenic |
ATTGAGGAGGAAGATGATGT+TGG | 0.609596 | 5.4:+21534855 | MS.gene070886:CDS |
ACTGGAAAGTATGCTAGTGA+GGG | 0.610975 | 5.4:+21535011 | MS.gene070886:CDS |
TGCTCCCCAAGCTATGATGT+TGG | 0.613997 | 5.4:+21536497 | MS.gene070886:CDS |
CATTTGCTCTTCCAGCTGGG+GGG | 0.620252 | 5.4:+21536564 | MS.gene070886:CDS |
AGATTCAGAAACACTTCCAG+TGG | 0.620947 | 5.4:+21540530 | MS.gene070886:intron |
TTGTCATGATGTTGGTGTAA+GGG | 0.623878 | 5.4:+21536427 | MS.gene070886:CDS |
GTGTCATAAGATGCGTGGAA+AGG | 0.628562 | 5.4:+21535115 | MS.gene070886:CDS |
ATTTCGTGTCATAAGATGCG+TGG | 0.629023 | 5.4:+21535110 | MS.gene070886:CDS |
AAATTCAGCTTGAACACTCG+TGG | 0.630389 | 5.4:-21534906 | None:intergenic |
GGGAGAGCAACATCTTTGTG+TGG | 0.642873 | 5.4:-21536527 | None:intergenic |
GAATCCAACATCATAGCTTG+GGG | 0.643262 | 5.4:-21536501 | None:intergenic |
GGTTTATATATATCCAGATG+GGG | 0.647985 | 5.4:+21534953 | MS.gene070886:CDS |
ACCGAATCAGTAGAGCTACC+GGG | 0.657582 | 5.4:+21537234 | MS.gene070886:CDS |
GTTGGTGTAAGGGCAACAGA+AGG | 0.660182 | 5.4:+21536437 | MS.gene070886:CDS |
AAAGCATCATATCTGACTGG+AGG | 0.688393 | 5.4:-21540559 | None:intergenic |
TGTTGGTGATGAATTTGGTG+AGG | 0.693735 | 5.4:+21534872 | MS.gene070886:CDS |
CTGGAAAGTATGCTAGTGAG+GGG | 0.699291 | 5.4:+21535012 | MS.gene070886:CDS |
TGGTGTGATGGCGTAACCAG+AGG | 0.723147 | 5.4:-21540600 | None:intergenic |
TATTAACCTGTGATCCACCA+GGG | 0.723678 | 5.4:-21537304 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAGTTAATATGTAAATT+TGG | + | chr5.4:21540451-21540470 | MS.gene070886:intron | 10.0% |
!! | AACAAAATATCATATAATTA+GGG | - | chr5.4:21539457-21539476 | None:intergenic | 10.0% |
!! | ATTAGATTATTTATTTCATA+CGG | + | chr5.4:21536949-21536968 | MS.gene070886:intron | 10.0% |
!!! | GTTCATTTTTTTATATTATT+TGG | - | chr5.4:21537847-21537866 | None:intergenic | 10.0% |
!!! | TTAAGTGTATTTTTTTTTTT+GGG | - | chr5.4:21540217-21540236 | None:intergenic | 10.0% |
!!! | TTGATAATATAGTTTTTTTA+TGG | + | chr5.4:21539033-21539052 | MS.gene070886:intron | 10.0% |
!!! | TTTAAGTGTATTTTTTTTTT+TGG | - | chr5.4:21540218-21540237 | None:intergenic | 10.0% |
!! | AAAAAATAGTTTAAAGACTA+TGG | + | chr5.4:21540246-21540265 | MS.gene070886:intron | 15.0% |
!! | AAAAATAGAAAATTTGGAAA+TGG | - | chr5.4:21534612-21534631 | None:intergenic | 15.0% |
!! | AAAATAGAAAATTTGGAAAT+GGG | - | chr5.4:21534611-21534630 | None:intergenic | 15.0% |
!! | ACTTCATAATAATTTAGTAA+AGG | + | chr5.4:21540062-21540081 | MS.gene070886:CDS | 15.0% |
!! | AGTATAATAATCTAGATAAA+TGG | - | chr5.4:21536675-21536694 | None:intergenic | 15.0% |
!! | ATAAGATAAACAAATATTGT+TGG | + | chr5.4:21537019-21537038 | MS.gene070886:intron | 15.0% |
!! | CTAGATTATTATACTAAAAT+TGG | + | chr5.4:21536680-21536699 | MS.gene070886:intron | 15.0% |
!! | GAACAAAATATCATATAATT+AGG | - | chr5.4:21539458-21539477 | None:intergenic | 15.0% |
!! | TAAGAAACAAAAAAACAAAA+GGG | - | chr5.4:21534798-21534817 | None:intergenic | 15.0% |
!! | TATTATTTGGTTAAATTTGA+AGG | - | chr5.4:21537834-21537853 | None:intergenic | 15.0% |
!! | TTGAAATATTTCTTGAAATA+CGG | - | chr5.4:21540102-21540121 | None:intergenic | 15.0% |
!!! | AAATTATCAAATTTTCACAA+TGG | - | chr5.4:21537104-21537123 | None:intergenic | 15.0% |
!!! | AATTCAATTATTTGTTGATA+TGG | + | chr5.4:21540475-21540494 | MS.gene070886:intron | 15.0% |
!!! | AGTTTTGGTATATTTTTAAT+GGG | - | chr5.4:21535984-21536003 | None:intergenic | 15.0% |
!!! | ATTTGTATAGTATTTGTTAT+TGG | + | chr5.4:21538899-21538918 | MS.gene070886:intron | 15.0% |
!!! | CTAAATTTTGCATTTTTTTA+CGG | + | chr5.4:21534751-21534770 | MS.gene070886:intron | 15.0% |
!!! | GATGAAATAATTTTGATTAT+GGG | - | chr5.4:21537922-21537941 | None:intergenic | 15.0% |
!!! | TAAGAAGTGTAATTAATATT+AGG | + | chr5.4:21539491-21539510 | MS.gene070886:intron | 15.0% |
!!! | TAAGTGTATTTTTTTTTTTG+GGG | - | chr5.4:21540216-21540235 | None:intergenic | 15.0% |
!!! | TGATGAAATAATTTTGATTA+TGG | - | chr5.4:21537923-21537942 | None:intergenic | 15.0% |
!!! | TTTTTAACCTTTTAATTTTG+TGG | + | chr5.4:21537390-21537409 | MS.gene070886:intron | 15.0% |
!! | AAAAAAAAGTAAATCTGAAG+AGG | - | chr5.4:21536613-21536632 | None:intergenic | 20.0% |
!! | AAATATCATATAATTAGGGA+CGG | - | chr5.4:21539453-21539472 | None:intergenic | 20.0% |
!! | AAATGTATGATTCTGTAAAA+AGG | + | chr5.4:21540387-21540406 | MS.gene070886:intron | 20.0% |
!! | AAGGTTAAAAAATATCAGAA+AGG | - | chr5.4:21537381-21537400 | None:intergenic | 20.0% |
!! | AATAATCACTTATTTGTTCA+TGG | + | chr5.4:21535659-21535678 | MS.gene070886:intron | 20.0% |
!! | AGAAAAATACTTAGTCAATT+AGG | - | chr5.4:21538413-21538432 | None:intergenic | 20.0% |
!! | AGTGTATGTAATTGAATATT+GGG | - | chr5.4:21538973-21538992 | None:intergenic | 20.0% |
!! | ATTTCATCAACAAATATTGA+GGG | + | chr5.4:21537934-21537953 | MS.gene070886:intron | 20.0% |
!! | CTAAGAAACAAAAAAACAAA+AGG | - | chr5.4:21534799-21534818 | None:intergenic | 20.0% |
!! | GAATGCTAAAAAGAATAAAA+TGG | + | chr5.4:21538002-21538021 | MS.gene070886:intron | 20.0% |
!! | GTATTTCTTTCAGAATATTA+GGG | + | chr5.4:21535034-21535053 | MS.gene070886:CDS | 20.0% |
!! | TAAAAACATTAATATCAAGC+CGG | + | chr5.4:21537888-21537907 | MS.gene070886:intron | 20.0% |
!! | TATTTCATCAACAAATATTG+AGG | + | chr5.4:21537933-21537952 | MS.gene070886:intron | 20.0% |
!! | TCATCGAAAAATAGAAAATT+TGG | - | chr5.4:21534618-21534637 | None:intergenic | 20.0% |
!! | TCCAAAATGACTTATAATTT+GGG | + | chr5.4:21539578-21539597 | MS.gene070886:intron | 20.0% |
!!! | AAGTGTATTTTTTTTTTTGG+GGG | - | chr5.4:21540215-21540234 | None:intergenic | 20.0% |
!!! | ACTGAACTTGTTTATAAAAT+AGG | + | chr5.4:21538990-21539009 | MS.gene070886:intron | 20.0% |
!!! | ATATAATGCGAATGATATTT+TGG | - | chr5.4:21538162-21538181 | None:intergenic | 20.0% |
!!! | CAGTTTTGGTATATTTTTAA+TGG | - | chr5.4:21535985-21536004 | None:intergenic | 20.0% |
!!! | CATTTTTTTACGGTTTTTTA+TGG | + | chr5.4:21534761-21534780 | MS.gene070886:intron | 20.0% |
!!! | CTTTTGTTTTTTTGTTTCTT+AGG | + | chr5.4:21534797-21534816 | MS.gene070886:intron | 20.0% |
!!! | GATTCGTTATATTTTTATTC+AGG | - | chr5.4:21535486-21535505 | None:intergenic | 20.0% |
!!! | GGTTTTTTATGGTTTTTTTA+TGG | + | chr5.4:21534772-21534791 | MS.gene070886:intron | 20.0% |
!!! | GTGAAAATTTGATAATTTTG+TGG | + | chr5.4:21537106-21537125 | MS.gene070886:intron | 20.0% |
!!! | TAAATTTGAAGGTTTAAAAC+TGG | - | chr5.4:21537823-21537842 | None:intergenic | 20.0% |
!!! | TATATTTTTATTCAGGAGTA+GGG | - | chr5.4:21535479-21535498 | None:intergenic | 20.0% |
!!! | TGTTGATATATAATTTGTTC+TGG | + | chr5.4:21537044-21537063 | MS.gene070886:intron | 20.0% |
!!! | TTATATTTTTATTCAGGAGT+AGG | - | chr5.4:21535480-21535499 | None:intergenic | 20.0% |
! | AAATGACTTATAATTTGGGA+CGG | + | chr5.4:21539582-21539601 | MS.gene070886:intron | 25.0% |
! | AAGGTTTATATATATCCAGA+TGG | + | chr5.4:21534951-21534970 | MS.gene070886:CDS | 25.0% |
! | AAGTATATGTTCAATTGGAT+AGG | - | chr5.4:21539684-21539703 | None:intergenic | 25.0% |
! | AATTAGGAGAGAATTTATCT+GGG | - | chr5.4:21538397-21538416 | None:intergenic | 25.0% |
! | AGAAACAACAAAAAACCAAA+AGG | - | chr5.4:21534642-21534661 | None:intergenic | 25.0% |
! | AGAAATATTTCAATGCTTCA+TGG | + | chr5.4:21540109-21540128 | MS.gene070886:intron | 25.0% |
! | AGGTAAATTTAACATGACAA+AGG | - | chr5.4:21537671-21537690 | None:intergenic | 25.0% |
! | AGGTTTATATATATCCAGAT+GGG | + | chr5.4:21534952-21534971 | MS.gene070886:CDS | 25.0% |
! | ATAATCTAGATAAATGGAAG+AGG | - | chr5.4:21536669-21536688 | None:intergenic | 25.0% |
! | ATCCAATTGAACATATACTT+GGG | + | chr5.4:21539684-21539703 | MS.gene070886:intron | 25.0% |
! | ATTCAGTTGTCATATCTATT+GGG | + | chr5.4:21538739-21538758 | MS.gene070886:intron | 25.0% |
! | CAAGAATATCATTAAAAGGA+AGG | - | chr5.4:21539951-21539970 | None:intergenic | 25.0% |
! | CAGTAAATTTACAGCTAAAA+AGG | + | chr5.4:21536193-21536212 | MS.gene070886:intron | 25.0% |
! | CAGTCAAGAATATCATTAAA+AGG | - | chr5.4:21539955-21539974 | None:intergenic | 25.0% |
! | CAGTGTATGTAATTGAATAT+TGG | - | chr5.4:21538974-21538993 | None:intergenic | 25.0% |
! | CATAATTGTACAAAATTACG+TGG | + | chr5.4:21536340-21536359 | MS.gene070886:CDS | 25.0% |
! | CTCCAAAATGACTTATAATT+TGG | + | chr5.4:21539577-21539596 | MS.gene070886:intron | 25.0% |
! | GAAAAACAACTGTGAATTAT+TGG | + | chr5.4:21538272-21538291 | MS.gene070886:intron | 25.0% |
! | GCAAAATTTAGAAATGTGTT+GGG | - | chr5.4:21534742-21534761 | None:intergenic | 25.0% |
! | GGTATTTCTTTCAGAATATT+AGG | + | chr5.4:21535033-21535052 | MS.gene070886:CDS | 25.0% |
! | GTGACATTTAAACTATAACT+TGG | + | chr5.4:21539781-21539800 | MS.gene070886:intron | 25.0% |
! | GTGTATGTAATTGAATATTG+GGG | - | chr5.4:21538972-21538991 | None:intergenic | 25.0% |
! | TAAGCAACCACAAAATTAAA+AGG | - | chr5.4:21537400-21537419 | None:intergenic | 25.0% |
! | TAAGTGATTATTTCCATCTT+AGG | - | chr5.4:21535651-21535670 | None:intergenic | 25.0% |
! | TAATTAACACAAGAAAAGCA+AGG | - | chr5.4:21538585-21538604 | None:intergenic | 25.0% |
! | TATCCAATTGAACATATACT+TGG | + | chr5.4:21539683-21539702 | MS.gene070886:intron | 25.0% |
! | TGCAAAATTTAGAAATGTGT+TGG | - | chr5.4:21534743-21534762 | None:intergenic | 25.0% |
! | TTAGTGGAAAATTGTAGTAA+TGG | + | chr5.4:21535565-21535584 | MS.gene070886:intron | 25.0% |
! | TTGTGAGTAAGTTTAGATAA+AGG | - | chr5.4:21536793-21536812 | None:intergenic | 25.0% |
! | TTTAACATTACGAACATTGT+GGG | + | chr5.4:21536880-21536899 | MS.gene070886:intron | 25.0% |
!! | AAAGAAATTAGTGACAGTTT+TGG | - | chr5.4:21535999-21536018 | None:intergenic | 25.0% |
!! | AAATTTTGTTGAATTTCGAG+TGG | + | chr5.4:21538131-21538150 | MS.gene070886:intron | 25.0% |
!! | ATTTCAAAATTTGTTTGACC+TGG | + | chr5.4:21536857-21536876 | MS.gene070886:intron | 25.0% |
!! | CACGTAATTTTGTACAATTA+TGG | - | chr5.4:21536342-21536361 | None:intergenic | 25.0% |
!! | CTTTTAATGATATTCTTGAC+TGG | + | chr5.4:21539953-21539972 | MS.gene070886:CDS | 25.0% |
!! | GATTTTTCTATGCATGTATA+AGG | + | chr5.4:21538033-21538052 | MS.gene070886:intron | 25.0% |
!! | TCAATTATTTGTTGATATGG+TGG | + | chr5.4:21540478-21540497 | MS.gene070886:intron | 25.0% |
!! | TCCCAAATTATAAGTCATTT+TGG | - | chr5.4:21539582-21539601 | None:intergenic | 25.0% |
!! | TGACTAAGTATTTTTCTCAA+GGG | + | chr5.4:21538416-21538435 | MS.gene070886:intron | 25.0% |
!! | TTAAGTTGTTTATCCAAACA+TGG | - | chr5.4:21537511-21537530 | None:intergenic | 25.0% |
!! | TTCATGGTTAAATTTTACTC+TGG | + | chr5.4:21540125-21540144 | MS.gene070886:intron | 25.0% |
!! | TTGACTAAGTATTTTTCTCA+AGG | + | chr5.4:21538415-21538434 | MS.gene070886:intron | 25.0% |
!! | TTGGTTCAAATTATGTTTTG+TGG | + | chr5.4:21536699-21536718 | MS.gene070886:intron | 25.0% |
!!! | AAACAATACTTTTTCTCACT+AGG | + | chr5.4:21536979-21536998 | MS.gene070886:intron | 25.0% |
!!! | AAGTTTTAGAATGTTTAGCT+TGG | + | chr5.4:21536234-21536253 | MS.gene070886:intron | 25.0% |
!!! | ACAAATTGCTTTGTTTTTCT+GGG | + | chr5.4:21539074-21539093 | MS.gene070886:intron | 25.0% |
!!! | ATTTGTTGTATATCGGTTAT+TGG | + | chr5.4:21537694-21537713 | MS.gene070886:intron | 25.0% |
!!! | CTTTATTGCTTGGTTTTTAA+TGG | + | chr5.4:21535165-21535184 | MS.gene070886:intron | 25.0% |
!!! | TACAAATTGCTTTGTTTTTC+TGG | + | chr5.4:21539073-21539092 | MS.gene070886:intron | 25.0% |
!!! | TCTTATAATTTGGGGTTTTA+AGG | + | chr5.4:21538864-21538883 | MS.gene070886:intron | 25.0% |
!!! | TTAGATTGTAGTTTTGTCTT+GGG | + | chr5.4:21535900-21535919 | MS.gene070886:intron | 25.0% |
!!! | TTGGTTTTTTGTTGTTTCTT+AGG | + | chr5.4:21534643-21534662 | MS.gene070886:intron | 25.0% |
AAACAACTGTGAATTATTGG+TGG | + | chr5.4:21538275-21538294 | MS.gene070886:intron | 30.0% | |
AAAGCACAACATTACAAATG+TGG | - | chr5.4:21535149-21535168 | None:intergenic | 30.0% | |
AAGGTTAATCAGTATGGAAA+AGG | - | chr5.4:21537744-21537763 | None:intergenic | 30.0% | |
AAGTCTCTTGATAGAACTTA+GGG | + | chr5.4:21538241-21538260 | MS.gene070886:intron | 30.0% | |
AATCAGTATGGAAAAGGATA+GGG | - | chr5.4:21537738-21537757 | None:intergenic | 30.0% | |
AATGTTCGTAATGTTAAACC+AGG | - | chr5.4:21536878-21536897 | None:intergenic | 30.0% | |
ACATGATACTTATTCCTGAA+TGG | + | chr5.4:21537478-21537497 | MS.gene070886:intron | 30.0% | |
ACTTATTTGAACTTATCCAC+TGG | - | chr5.4:21537634-21537653 | None:intergenic | 30.0% | |
AGAGCACATCTTATAATGTT+TGG | + | chr5.4:21535822-21535841 | MS.gene070886:intron | 30.0% | |
AGTAGCATTTAATGCTTCAT+CGG | + | chr5.4:21539517-21539536 | MS.gene070886:intron | 30.0% | |
ATAGCAGATTCTATCCATTA+TGG | + | chr5.4:21537335-21537354 | MS.gene070886:CDS | 30.0% | |
ATGGAATTCTTCACAAGTAA+TGG | - | chr5.4:21536467-21536486 | None:intergenic | 30.0% | |
ATGTCAAATACCAACTATAG+TGG | - | chr5.4:21539354-21539373 | None:intergenic | 30.0% | |
ATTATCATTTCCGTCTTTGA+CGG | - | chr5.4:21538529-21538548 | None:intergenic | 30.0% | |
ATTCATTAGATGAATGGCTT+GGG | + | chr5.4:21538840-21538859 | MS.gene070886:intron | 30.0% | |
CAATTAGGAGAGAATTTATC+TGG | - | chr5.4:21538398-21538417 | None:intergenic | 30.0% | |
GAGTAGTAATTATTACTCCA+AGG | - | chr5.4:21536918-21536937 | None:intergenic | 30.0% | |
GATAGATTCAGGAAAAATTG+AGG | + | chr5.4:21534839-21534858 | MS.gene070886:CDS | 30.0% | |
GATTCAGTTGTCATATCTAT+TGG | + | chr5.4:21538738-21538757 | MS.gene070886:intron | 30.0% | |
GGTTTATATATATCCAGATG+GGG | + | chr5.4:21534953-21534972 | MS.gene070886:CDS | 30.0% | |
GTTTAACATTACGAACATTG+TGG | + | chr5.4:21536879-21536898 | MS.gene070886:intron | 30.0% | |
TAATCAGTATGGAAAAGGAT+AGG | - | chr5.4:21537739-21537758 | None:intergenic | 30.0% | |
TACTATAGATATCGTTGCTA+TGG | - | chr5.4:21536090-21536109 | None:intergenic | 30.0% | |
TAGAAAATTTGGAAATGGGT+TGG | - | chr5.4:21534607-21534626 | None:intergenic | 30.0% | |
TATATGTTCAATTGGATAGG+TGG | - | chr5.4:21539681-21539700 | None:intergenic | 30.0% | |
TATTCATTAGATGAATGGCT+TGG | + | chr5.4:21538839-21538858 | MS.gene070886:intron | 30.0% | |
TCACAAAAGGTTAATCAGTA+TGG | - | chr5.4:21537750-21537769 | None:intergenic | 30.0% | |
TGATATCCAAGTATCCTTAT+TGG | + | chr5.4:21536369-21536388 | MS.gene070886:CDS | 30.0% | |
TGCTGTAAATATAGCTAAAC+AGG | + | chr5.4:21535695-21535714 | MS.gene070886:intron | 30.0% | |
TGTAGTGCGACTTATAATTT+GGG | + | chr5.4:21539543-21539562 | MS.gene070886:intron | 30.0% | |
TTATTTCCATCTCAGAATCA+GGG | - | chr5.4:21536140-21536159 | None:intergenic | 30.0% | |
TTCTACTTAATACCCTAGTA+GGG | - | chr5.4:21535313-21535332 | None:intergenic | 30.0% | |
TTGATTATGGGAGAAATTAC+CGG | - | chr5.4:21537910-21537929 | None:intergenic | 30.0% | |
TTGTAGTGCGACTTATAATT+TGG | + | chr5.4:21539542-21539561 | MS.gene070886:intron | 30.0% | |
TTGTTCATGGTTTATTACCA+TGG | + | chr5.4:21535672-21535691 | MS.gene070886:intron | 30.0% | |
TTTAGCATTCAAATCTGATC+AGG | - | chr5.4:21537992-21538011 | None:intergenic | 30.0% | |
! | ACTTATTCCTGAATGGTTTT+TGG | + | chr5.4:21537485-21537504 | MS.gene070886:intron | 30.0% |
! | AGAAAATTTGGAAATGGGTT+GGG | - | chr5.4:21534606-21534625 | None:intergenic | 30.0% |
! | AGCATTGTCATTTGTCATAT+AGG | - | chr5.4:21537447-21537466 | None:intergenic | 30.0% |
! | AGGGTGAAAAAAGATGTTTT+GGG | + | chr5.4:21537953-21537972 | MS.gene070886:intron | 30.0% |
! | CAGATATGATGCTTTTCATA+TGG | + | chr5.4:21540567-21540586 | MS.gene070886:CDS | 30.0% |
! | GGTCGAAGTACTTTATTATT+GGG | + | chr5.4:21539626-21539645 | MS.gene070886:intron | 30.0% |
! | GTCTTGGGCTTTTTATTAAA+AGG | + | chr5.4:21535915-21535934 | MS.gene070886:intron | 30.0% |
! | GTTATAAGAGCACAAGATTT+AGG | - | chr5.4:21536118-21536137 | None:intergenic | 30.0% |
! | TAATGTTGTGCTTTATTGCT+TGG | + | chr5.4:21535155-21535174 | MS.gene070886:intron | 30.0% |
! | TAGTGCTGTAAAATCTTTTC+TGG | - | chr5.4:21537271-21537290 | None:intergenic | 30.0% |
!! | AAAATTTGCTGTTGTACTCA+AGG | + | chr5.4:21539978-21539997 | MS.gene070886:CDS | 30.0% |
!! | ACCTTGCATTTGTTGTATAT+CGG | + | chr5.4:21537687-21537706 | MS.gene070886:intron | 30.0% |
!! | ATTTTGTTTACCTGAGATGA+AGG | - | chr5.4:21534572-21534591 | None:intergenic | 30.0% |
!! | CTATTTTTCGATGATCCTTT+TGG | + | chr5.4:21534624-21534643 | MS.gene070886:intron | 30.0% |
!! | TTGATAATTTTGTGGTTTGC+AGG | + | chr5.4:21537114-21537133 | MS.gene070886:intron | 30.0% |
!! | TTTAGAATGTTTAGCTTGGA+TGG | + | chr5.4:21536238-21536257 | MS.gene070886:intron | 30.0% |
!! | TTTTGAGGATTTGTTTAAGC+TGG | - | chr5.4:21540017-21540036 | None:intergenic | 30.0% |
!! | TTTTGTTTACCTGAGATGAA+GGG | - | chr5.4:21534571-21534590 | None:intergenic | 30.0% |
!!! | AATACTTTTTCTCACTAGGT+GGG | + | chr5.4:21536983-21537002 | MS.gene070886:intron | 30.0% |
!!! | AGGAGTAGGGTTTTAAATAA+AGG | - | chr5.4:21535466-21535485 | None:intergenic | 30.0% |
!!! | CTTAGATTGTAGTTTTGTCT+TGG | + | chr5.4:21535899-21535918 | MS.gene070886:intron | 30.0% |
!!! | TTGGACTTGTTAGATAGTTT+TGG | + | chr5.4:21538918-21538937 | MS.gene070886:intron | 30.0% |
!!! | TTGTTGTTGATTTTGCTTCA+CGG | - | chr5.4:21534450-21534469 | None:intergenic | 30.0% |
AAAGAAGAGTGAGAATTGCT+AGG | - | chr5.4:21534517-21534536 | None:intergenic | 35.0% | |
AACATAGCATAGAGGACATA+GGG | - | chr5.4:21535960-21535979 | None:intergenic | 35.0% | |
AAGAAGAGTGAGAATTGCTA+GGG | - | chr5.4:21534516-21534535 | None:intergenic | 35.0% | |
AAGGGAAATGCTCTTTGTTA+CGG | + | chr5.4:21538434-21538453 | MS.gene070886:intron | 35.0% | |
AAGTATACGTGCAATTCGAT+CGG | - | chr5.4:21539742-21539761 | None:intergenic | 35.0% | |
AATCCTCAAAAACAAATCGC+AGG | + | chr5.4:21540026-21540045 | MS.gene070886:CDS | 35.0% | |
AATCTGTGTCACCAAATCTA+AGG | + | chr5.4:21535502-21535521 | MS.gene070886:intron | 35.0% | |
AATGTAGTCAGTCTCATGTT+TGG | + | chr5.4:21535790-21535809 | MS.gene070886:intron | 35.0% | |
AATTCACACCTTAGAATAGG+CGG | - | chr5.4:21536022-21536041 | None:intergenic | 35.0% | |
ACATGGAAATTGTTATGCTG+TGG | + | chr5.4:21535422-21535441 | MS.gene070886:intron | 35.0% | |
ACCGATATACAACAAATGCA+AGG | - | chr5.4:21537691-21537710 | None:intergenic | 35.0% | |
ACTTAGTCACAATTGTACTG+TGG | + | chr5.4:21535391-21535410 | MS.gene070886:intron | 35.0% | |
AGATTCAGGAAAAATTGAGG+AGG | + | chr5.4:21534842-21534861 | MS.gene070886:CDS | 35.0% | |
AGTTATTCTTGCACGTGTAT+GGG | + | chr5.4:21537181-21537200 | MS.gene070886:CDS | 35.0% | |
ATATGGTTATGTATGACCTC+TGG | + | chr5.4:21540584-21540603 | MS.gene070886:CDS | 35.0% | |
ATCTGTGTCACCAAATCTAA+GGG | + | chr5.4:21535503-21535522 | MS.gene070886:intron | 35.0% | |
ATGAATCCAACATCATAGCT+TGG | - | chr5.4:21536506-21536525 | None:intergenic | 35.0% | |
ATGGCTAAGTTTCTACTTCT+AGG | + | chr5.4:21536257-21536276 | MS.gene070886:intron | 35.0% | |
ATGGTTGTGGTGAAAATCAA+CGG | - | chr5.4:21538495-21538514 | None:intergenic | 35.0% | |
ATTATTTCCATCTTAGGAGC+AGG | - | chr5.4:21535645-21535664 | None:intergenic | 35.0% | |
ATTTCTTTCCGCCTATTCTA+AGG | + | chr5.4:21536011-21536030 | MS.gene070886:intron | 35.0% | |
CAACTATAGTGGCACTATAA+CGG | - | chr5.4:21539343-21539362 | None:intergenic | 35.0% | |
CAAGTCTCTTGATAGAACTT+AGG | + | chr5.4:21538240-21538259 | MS.gene070886:intron | 35.0% | |
CACCCAAGTATATGTTCAAT+TGG | - | chr5.4:21539689-21539708 | None:intergenic | 35.0% | |
CCATTCATCTAATGAATACG+AGG | - | chr5.4:21538837-21538856 | None:intergenic | 35.0% | |
CCCTTGAAATCAGATTTCAA+GGG | + | chr5.4:21538677-21538696 | MS.gene070886:intron | 35.0% | |
CCCTTGAAATCTGATTTCAA+GGG | - | chr5.4:21538680-21538699 | None:intergenic | 35.0% | |
CCTCGTATTCATTAGATGAA+TGG | + | chr5.4:21538834-21538853 | MS.gene070886:intron | 35.0% | |
CTACAATGTCTGCAAATCAT+TGG | + | chr5.4:21538214-21538233 | MS.gene070886:intron | 35.0% | |
CTTCTACTTAATACCCTAGT+AGG | - | chr5.4:21535314-21535333 | None:intergenic | 35.0% | |
GAGAAACAAATTCAAGCATC+TGG | + | chr5.4:21538101-21538120 | MS.gene070886:intron | 35.0% | |
GATTTGCAGACATTGTAGTT+AGG | - | chr5.4:21538212-21538231 | None:intergenic | 35.0% | |
GCTTGGGTTCTTATAATTTG+GGG | + | chr5.4:21538856-21538875 | MS.gene070886:intron | 35.0% | |
GGCTTGGGTTCTTATAATTT+GGG | + | chr5.4:21538855-21538874 | MS.gene070886:intron | 35.0% | |
GTGAATTATTGGTGGAAATG+TGG | + | chr5.4:21538283-21538302 | MS.gene070886:intron | 35.0% | |
TAACATAGCATAGAGGACAT+AGG | - | chr5.4:21535961-21535980 | None:intergenic | 35.0% | |
TACTCTTTGCTAGAAACAGT+AGG | - | chr5.4:21538788-21538807 | None:intergenic | 35.0% | |
TAGCTATATTTACAGCACCA+TGG | - | chr5.4:21535692-21535711 | None:intergenic | 35.0% | |
TCACGATTCTCTGTAAATCA+AGG | - | chr5.4:21535361-21535380 | None:intergenic | 35.0% | |
TCCCTTGAAATCAGATTTCA+AGG | + | chr5.4:21538676-21538695 | MS.gene070886:intron | 35.0% | |
TCCCTTGAAATCTGATTTCA+AGG | - | chr5.4:21538681-21538700 | None:intergenic | 35.0% | |
TCTACTTAATACCCTAGTAG+GGG | - | chr5.4:21535312-21535331 | None:intergenic | 35.0% | |
TCTCTGTAAATCAAGGATCA+CGG | - | chr5.4:21535354-21535373 | None:intergenic | 35.0% | |
TCTGTTCCAATAAGGATACT+TGG | - | chr5.4:21536378-21536397 | None:intergenic | 35.0% | |
TGAAATCAGATTTCAAGGGA+AGG | + | chr5.4:21538681-21538700 | MS.gene070886:intron | 35.0% | |
TGAATCCAACATCATAGCTT+GGG | - | chr5.4:21536505-21536524 | None:intergenic | 35.0% | |
TGAGTATTTGAGGGAAAGAT+AGG | - | chr5.4:21534546-21534565 | None:intergenic | 35.0% | |
TGGTGTCTGATAAAAAGTCT+TGG | - | chr5.4:21534982-21535001 | None:intergenic | 35.0% | |
TTATTTCCATCTTAGGAGCA+GGG | - | chr5.4:21535644-21535663 | None:intergenic | 35.0% | |
TTCAGAATATTAGGGAGAGT+CGG | + | chr5.4:21535042-21535061 | MS.gene070886:CDS | 35.0% | |
TTGGGGTAAAATCGATTAAC+TGG | - | chr5.4:21538955-21538974 | None:intergenic | 35.0% | |
TTGTCATGATGTTGGTGTAA+GGG | + | chr5.4:21536427-21536446 | MS.gene070886:CDS | 35.0% | |
TTTGTTTACCTGAGATGAAG+GGG | - | chr5.4:21534570-21534589 | None:intergenic | 35.0% | |
! | AAGATTTAGAATGTCTAGCC+TGG | + | chr5.4:21535736-21535755 | MS.gene070886:intron | 35.0% |
! | AGACTTTTTATCAGACACCA+AGG | + | chr5.4:21534982-21535001 | MS.gene070886:CDS | 35.0% |
! | AGATGTAATGGTTGATGTGA+AGG | - | chr5.4:21539161-21539180 | None:intergenic | 35.0% |
! | CTTCCTTTTTATTGTGCTGA+GGG | + | chr5.4:21539188-21539207 | MS.gene070886:intron | 35.0% |
! | GAGGGTGAAAAAAGATGTTT+TGG | + | chr5.4:21537952-21537971 | MS.gene070886:intron | 35.0% |
! | GGGTCGAAGTACTTTATTAT+TGG | + | chr5.4:21539625-21539644 | MS.gene070886:intron | 35.0% |
! | GGGTGAAAAAAGATGTTTTG+GGG | + | chr5.4:21537954-21537973 | MS.gene070886:intron | 35.0% |
! | GTGGGTCTTAATATTTTCCT+TGG | + | chr5.4:21536898-21536917 | MS.gene070886:intron | 35.0% |
! | GTTATTTCCATCTCAGAATC+AGG | - | chr5.4:21536141-21536160 | None:intergenic | 35.0% |
! | TAATGGGTAACATAGCATAG+AGG | - | chr5.4:21535968-21535987 | None:intergenic | 35.0% |
! | TGGCTTGGGTTCTTATAATT+TGG | + | chr5.4:21538854-21538873 | MS.gene070886:intron | 35.0% |
! | TTATAACCCTGATTCTGAGA+TGG | + | chr5.4:21536131-21536150 | MS.gene070886:intron | 35.0% |
! | TTCCTTTTTATTGTGCTGAG+GGG | + | chr5.4:21539189-21539208 | MS.gene070886:intron | 35.0% |
! | TTTGTCACTTGTCATGATGT+TGG | + | chr5.4:21536419-21536438 | MS.gene070886:CDS | 35.0% |
! | TTTTATGGTGTAGTGTAGCT+TGG | + | chr5.4:21539048-21539067 | MS.gene070886:intron | 35.0% |
!! | AAACTGGTTCTGAATCAAAC+AGG | - | chr5.4:21537807-21537826 | None:intergenic | 35.0% |
!! | AACATGACAAAGGACTAGTT+TGG | - | chr5.4:21537661-21537680 | None:intergenic | 35.0% |
!! | ACTAAGTTTTGTATATGCCC+TGG | + | chr5.4:21537287-21537306 | MS.gene070886:CDS | 35.0% |
!! | AGTTTGTTACAAGGAGAGTT+GGG | - | chr5.4:21538654-21538673 | None:intergenic | 35.0% |
!! | GATGATGTTGGTGATGAATT+TGG | + | chr5.4:21534867-21534886 | MS.gene070886:CDS | 35.0% |
!! | GGTGAAAAAAGATGTTTTGG+GGG | + | chr5.4:21537955-21537974 | MS.gene070886:intron | 35.0% |
!! | GTATTTTTGCATCTGGTTAG+TGG | + | chr5.4:21535549-21535568 | MS.gene070886:intron | 35.0% |
!! | GTGAAAAAAGATGTTTTGGG+GGG | + | chr5.4:21537956-21537975 | MS.gene070886:intron | 35.0% |
!! | GTTCATGATTTGTTACCATG+AGG | + | chr5.4:21536170-21536189 | MS.gene070886:intron | 35.0% |
!! | GTTTCGTGTATTTTTGCATC+TGG | + | chr5.4:21535542-21535561 | MS.gene070886:intron | 35.0% |
!! | TGAAAAGCATCATATCTGAC+TGG | - | chr5.4:21540565-21540584 | None:intergenic | 35.0% |
!! | TTTGTTTTTCTGGGTTTCTG+TGG | + | chr5.4:21539083-21539102 | MS.gene070886:intron | 35.0% |
!! | TTTTGTTGAATTTCGAGTGG+AGG | + | chr5.4:21538134-21538153 | MS.gene070886:intron | 35.0% |
!!! | CAATACTTTTTCTCACTAGG+TGG | + | chr5.4:21536982-21537001 | MS.gene070886:intron | 35.0% |
AAAAACAGATGAGCCTGATC+AGG | - | chr5.4:21535083-21535102 | None:intergenic | 40.0% | |
AAATTCAGCTTGAACACTCG+TGG | - | chr5.4:21534909-21534928 | None:intergenic | 40.0% | |
AACATGGCCAAAAACCATTC+AGG | - | chr5.4:21537495-21537514 | None:intergenic | 40.0% | |
AATGTAGTCAAACTCATGCC+TGG | + | chr5.4:21536283-21536302 | MS.gene070886:intron | 40.0% | |
AATGTCACGCGTGTAACAAT+TGG | - | chr5.4:21539769-21539788 | None:intergenic | 40.0% | |
ACATAGCATAGAGGACATAG+GGG | - | chr5.4:21535959-21535978 | None:intergenic | 40.0% | |
ACATCCCAAGTTCATCCTTA+AGG | - | chr5.4:21539855-21539874 | None:intergenic | 40.0% | |
ACTCCTAAACTGTGATTCCA+AGG | - | chr5.4:21539245-21539264 | None:intergenic | 40.0% | |
ACTGTGAAGGTGATAGATTC+AGG | + | chr5.4:21534828-21534847 | MS.gene070886:CDS | 40.0% | |
AGATTCAGAAACACTTCCAG+TGG | + | chr5.4:21540530-21540549 | MS.gene070886:intron | 40.0% | |
AGCGTTTCACGAAACAATAG+TGG | + | chr5.4:21539389-21539408 | MS.gene070886:intron | 40.0% | |
AGTGTTCAAGCTGAATTTCG+CGG | + | chr5.4:21534911-21534930 | MS.gene070886:CDS | 40.0% | |
AGTTTAGGAGTCCTTAGCTA+AGG | + | chr5.4:21539254-21539273 | MS.gene070886:intron | 40.0% | |
ATAGGCTGAAGTTCTTGAAC+TGG | + | chr5.4:21539008-21539027 | MS.gene070886:intron | 40.0% | |
ATCCATTATGGATGCATACC+TGG | + | chr5.4:21537347-21537366 | MS.gene070886:CDS | 40.0% | |
ATCCCCTCAGCACAATAAAA+AGG | - | chr5.4:21539194-21539213 | None:intergenic | 40.0% | |
ATGAAGGGGTTGAGTATTTG+AGG | - | chr5.4:21534556-21534575 | None:intergenic | 40.0% | |
ATGTCACGCGTGTAACAATT+GGG | - | chr5.4:21539768-21539787 | None:intergenic | 40.0% | |
ATTGAGGAGGAAGATGATGT+TGG | + | chr5.4:21534855-21534874 | MS.gene070886:CDS | 40.0% | |
ATTTCGTGTCATAAGATGCG+TGG | + | chr5.4:21535110-21535129 | MS.gene070886:CDS | 40.0% | |
CACAATTCACCCCTTAGATT+TGG | - | chr5.4:21535516-21535535 | None:intergenic | 40.0% | |
CACTGTTTCAACCTTAGCTA+AGG | - | chr5.4:21539268-21539287 | None:intergenic | 40.0% | |
CAGAGAATCGTGATCAAATG+CGG | + | chr5.4:21535368-21535387 | MS.gene070886:intron | 40.0% | |
CATCCCAAGTTCATCCTTAA+GGG | - | chr5.4:21539854-21539873 | None:intergenic | 40.0% | |
CATTAAGAAAAGAGCAGTGC+TGG | - | chr5.4:21538619-21538638 | None:intergenic | 40.0% | |
CATTCTATTCTACCTCGAAG+CGG | - | chr5.4:21535774-21535793 | None:intergenic | 40.0% | |
CCTCAGCACAATAAAAAGGA+AGG | - | chr5.4:21539190-21539209 | None:intergenic | 40.0% | |
CGCAATTCACACCTTAGAAT+AGG | - | chr5.4:21536025-21536044 | None:intergenic | 40.0% | |
CGCATCTTATGACACGAAAT+AGG | - | chr5.4:21535110-21535129 | None:intergenic | 40.0% | |
CGTTAATGCATACTGCTTAG+TGG | + | chr5.4:21540418-21540437 | MS.gene070886:intron | 40.0% | |
CTTGTCATGATGTTGGTGTA+AGG | + | chr5.4:21536426-21536445 | MS.gene070886:CDS | 40.0% | |
GAATCCAACATCATAGCTTG+GGG | - | chr5.4:21536504-21536523 | None:intergenic | 40.0% | |
GAGTTATTCTTGCACGTGTA+TGG | + | chr5.4:21537180-21537199 | MS.gene070886:CDS | 40.0% | |
GCATCAACAAGATTTGCAAC+TGG | - | chr5.4:21534677-21534696 | None:intergenic | 40.0% | |
GCTGTAAATTTACTGCCTCA+TGG | - | chr5.4:21536188-21536207 | None:intergenic | 40.0% | |
GGAAGGATTGCAAGATGTAA+TGG | - | chr5.4:21539173-21539192 | None:intergenic | 40.0% | |
GGGGGAATGATGTAGAAAAT+AGG | + | chr5.4:21536582-21536601 | MS.gene070886:CDS | 40.0% | |
GGTGGGAATTCTATTCCATA+AGG | - | chr5.4:21539113-21539132 | None:intergenic | 40.0% | |
GTTGCAAATCTTGTTGATGC+AGG | + | chr5.4:21534677-21534696 | MS.gene070886:intron | 40.0% | |
GTTTCGTGTCAATCTTGTTG+TGG | + | chr5.4:21536766-21536785 | MS.gene070886:intron | 40.0% | |
TACCAGGTATGCATCCATAA+TGG | - | chr5.4:21537352-21537371 | None:intergenic | 40.0% | |
TACTTTCCAGTAAGCTTCCT+TGG | - | chr5.4:21535002-21535021 | None:intergenic | 40.0% | |
TATTAACCTGTGATCCACCA+GGG | - | chr5.4:21537307-21537326 | None:intergenic | 40.0% | |
TCATCACTCTTCAGTATGTG+AGG | + | chr5.4:21540178-21540197 | MS.gene070886:intron | 40.0% | |
TCATGCCTGGATATTATGCA+GGG | + | chr5.4:21536296-21536315 | MS.gene070886:intron | 40.0% | |
TCTATCACCTTCACAGTAAC+TGG | - | chr5.4:21534825-21534844 | None:intergenic | 40.0% | |
TCTGTGTCACCAAATCTAAG+GGG | + | chr5.4:21535504-21535523 | MS.gene070886:intron | 40.0% | |
TGAAGGGGTTGAGTATTTGA+GGG | - | chr5.4:21534555-21534574 | None:intergenic | 40.0% | |
TGGAATAGAATTCCCACCAT+TGG | + | chr5.4:21539115-21539134 | MS.gene070886:intron | 40.0% | |
TTAAAACCCTGCTCCTAAGA+TGG | + | chr5.4:21535635-21535654 | MS.gene070886:intron | 40.0% | |
TTAGCTTCAGGTCAGTTACA+CGG | - | chr5.4:21539894-21539913 | None:intergenic | 40.0% | |
TTGCCCTTAAGGATGAACTT+GGG | + | chr5.4:21539848-21539867 | MS.gene070886:intron | 40.0% | |
! | AAAGCATCATATCTGACTGG+AGG | - | chr5.4:21540562-21540581 | None:intergenic | 40.0% |
! | ACTGGAAAGTATGCTAGTGA+GGG | + | chr5.4:21535011-21535030 | MS.gene070886:CDS | 40.0% |
! | ATATTAGGGAGAGTCGGTTT+CGG | + | chr5.4:21535048-21535067 | MS.gene070886:CDS | 40.0% |
! | ATCAGAAAGGTTGACTTACC+AGG | - | chr5.4:21537368-21537387 | None:intergenic | 40.0% |
! | CCTTCCTTTTTATTGTGCTG+AGG | + | chr5.4:21539187-21539206 | MS.gene070886:intron | 40.0% |
! | CGTTATAGTGCCACTATAGT+TGG | + | chr5.4:21539341-21539360 | MS.gene070886:intron | 40.0% |
! | CTGCAAACAACATTAGCTTC+AGG | - | chr5.4:21539906-21539925 | None:intergenic | 40.0% |
! | GACTTATAATTTGGGACGGA+GGG | + | chr5.4:21539586-21539605 | MS.gene070886:intron | 40.0% |
! | TAATGGTTGATGTGAAGGAC+TGG | - | chr5.4:21539156-21539175 | None:intergenic | 40.0% |
! | TACTGGAAAGTATGCTAGTG+AGG | + | chr5.4:21535010-21535029 | MS.gene070886:CDS | 40.0% |
! | TGACTTATAATTTGGGACGG+AGG | + | chr5.4:21539585-21539604 | MS.gene070886:intron | 40.0% |
! | TTTTATTGTGCTGAGGGGAT+CGG | + | chr5.4:21539194-21539213 | MS.gene070886:intron | 40.0% |
!! | AAGTTTTGTATATGCCCTGG+TGG | + | chr5.4:21537290-21537309 | MS.gene070886:CDS | 40.0% |
!! | AATGCTCTGGAAGTAGTCTT+AGG | - | chr5.4:21538363-21538382 | None:intergenic | 40.0% |
!! | AGGGAGTATTTGACAACACT+GGG | + | chr5.4:21539605-21539624 | MS.gene070886:intron | 40.0% |
!! | GAGTTTGTTACAAGGAGAGT+TGG | - | chr5.4:21538655-21538674 | None:intergenic | 40.0% |
!! | TGTTGGTGATGAATTTGGTG+AGG | + | chr5.4:21534872-21534891 | MS.gene070886:CDS | 40.0% |
!!! | CAGGACTAGTCTTGGATTTT+GGG | + | chr5.4:21537133-21537152 | MS.gene070886:intron | 40.0% |
!!! | CATCCTGCGATTTGTTTTTG+AGG | - | chr5.4:21540032-21540051 | None:intergenic | 40.0% |
!!! | CTTAGGAGCAGGGTTTTAAA+AGG | - | chr5.4:21535634-21535653 | None:intergenic | 40.0% |
!!! | GAATGGTTTTTGGCCATGTT+TGG | + | chr5.4:21537495-21537514 | MS.gene070886:intron | 40.0% |
AAAGAAGTGATCAGCACCCA+GGG | - | chr5.4:21536402-21536421 | None:intergenic | 45.0% | |
AAAGGTCCAAACCCAGATCT+GGG | - | chr5.4:21535448-21535467 | None:intergenic | 45.0% | |
AAAGTCTTGGAATCCCCATC+TGG | - | chr5.4:21534969-21534988 | None:intergenic | 45.0% | |
AACAGTAGGTGAGAGGTGAT+AGG | - | chr5.4:21538774-21538793 | None:intergenic | 45.0% | |
AACCGAATCAGTAGAGCTAC+CGG | + | chr5.4:21537233-21537252 | MS.gene070886:CDS | 45.0% | |
AAGCGGACACTTAAACATCC+AGG | - | chr5.4:21535757-21535776 | None:intergenic | 45.0% | |
AATACCCTAGTAGGGGAACA+AGG | - | chr5.4:21535305-21535324 | None:intergenic | 45.0% | |
ACAGTGTTGTCAAACGCAGA+TGG | + | chr5.4:21539282-21539301 | MS.gene070886:intron | 45.0% | |
ACTCTGATGTGTTGCCCTTA+AGG | + | chr5.4:21539837-21539856 | MS.gene070886:intron | 45.0% | |
ATACTCAACCCCTTCATCTC+AGG | + | chr5.4:21534559-21534578 | MS.gene070886:CDS | 45.0% | |
ATGTGCCCTGCATAATATCC+AGG | - | chr5.4:21536304-21536323 | None:intergenic | 45.0% | |
ATGTTTAAGTGTCCGCTTCG+AGG | + | chr5.4:21535759-21535778 | MS.gene070886:intron | 45.0% | |
CACTGGCATAAACACTTGTG+AGG | - | chr5.4:21537617-21537636 | None:intergenic | 45.0% | |
CATATAATTAGGGACGGAGC+AGG | - | chr5.4:21539447-21539466 | None:intergenic | 45.0% | |
CCTTATTGGAACAGAACCCT+GGG | + | chr5.4:21536383-21536402 | MS.gene070886:CDS | 45.0% | |
CTATTAACCTGTGATCCACC+AGG | - | chr5.4:21537308-21537327 | None:intergenic | 45.0% | |
CTCACAAGTGTTTATGCCAG+TGG | + | chr5.4:21537615-21537634 | MS.gene070886:intron | 45.0% | |
CTCATGCCTGGATATTATGC+AGG | + | chr5.4:21536295-21536314 | MS.gene070886:intron | 45.0% | |
CTTGCGAACTGCTTCACAAA+AGG | - | chr5.4:21537763-21537782 | None:intergenic | 45.0% | |
GAGTGAGAATTGCTAGGGTT+AGG | - | chr5.4:21534511-21534530 | None:intergenic | 45.0% | |
GGAGAGAATTTATCTGGGTC+AGG | - | chr5.4:21538392-21538411 | None:intergenic | 45.0% | |
GGAGATGGAGAAGAAGTTCA+AGG | + | chr5.4:21534932-21534951 | MS.gene070886:CDS | 45.0% | |
GGTTTCTGTGGAACACCTTA+TGG | + | chr5.4:21539095-21539114 | MS.gene070886:intron | 45.0% | |
GTACTGTGGTTTCAGCAACA+TGG | + | chr5.4:21535405-21535424 | MS.gene070886:intron | 45.0% | |
GTGCCTTGGAATCACAGTTT+AGG | + | chr5.4:21539239-21539258 | MS.gene070886:intron | 45.0% | |
GTGTCATAAGATGCGTGGAA+AGG | + | chr5.4:21535115-21535134 | MS.gene070886:CDS | 45.0% | |
GTTGCCCTTAAGGATGAACT+TGG | + | chr5.4:21539847-21539866 | MS.gene070886:intron | 45.0% | |
TAAAGGTCCAAACCCAGATC+TGG | - | chr5.4:21535449-21535468 | None:intergenic | 45.0% | |
TAGTAGGGGAACAAGGCATA+AGG | - | chr5.4:21535298-21535317 | None:intergenic | 45.0% | |
TCCTTATTGGAACAGAACCC+TGG | + | chr5.4:21536382-21536401 | MS.gene070886:CDS | 45.0% | |
TGCCTGATTTCCGTCAAAGA+CGG | + | chr5.4:21538516-21538535 | MS.gene070886:intron | 45.0% | |
TGCTAGAAACAGTAGGTGAG+AGG | - | chr5.4:21538781-21538800 | None:intergenic | 45.0% | |
TGGTGAGCAAAGCTCTACAA+TGG | + | chr5.4:21538303-21538322 | MS.gene070886:intron | 45.0% | |
TTAGGTGCCAGTTACTGTGA+AGG | + | chr5.4:21534815-21534834 | MS.gene070886:intron | 45.0% | |
TTCCGTCTTTGACGGAAATC+AGG | - | chr5.4:21538521-21538540 | None:intergenic | 45.0% | |
TTGTTACAAGGAGAGTTGGG+AGG | - | chr5.4:21538651-21538670 | None:intergenic | 45.0% | |
TTTATTGTGCTGAGGGGATC+GGG | + | chr5.4:21539195-21539214 | MS.gene070886:intron | 45.0% | |
TTTGACGGAAATCAGGCACA+TGG | - | chr5.4:21538514-21538533 | None:intergenic | 45.0% | |
! | CTGGAAAGTATGCTAGTGAG+GGG | + | chr5.4:21535012-21535031 | MS.gene070886:CDS | 45.0% |
! | TATGCCTTGTTCCCCTACTA+GGG | + | chr5.4:21535298-21535317 | MS.gene070886:intron | 45.0% |
! | TGGAAGTAGTCTTAGGACTC+TGG | - | chr5.4:21538356-21538375 | None:intergenic | 45.0% |
! | TTATGCCTTGTTCCCCTACT+AGG | + | chr5.4:21535297-21535316 | MS.gene070886:intron | 45.0% |
! | TTTCTGGTACACTAGATGCC+CGG | - | chr5.4:21537255-21537274 | None:intergenic | 45.0% |
!! | CAAGGGACGAGTTTGTTACA+AGG | - | chr5.4:21538663-21538682 | None:intergenic | 45.0% |
!! | GAGGGAGTATTTGACAACAC+TGG | + | chr5.4:21539604-21539623 | MS.gene070886:intron | 45.0% |
!! | GTGGAATACAAAGAGTGCCT+TGG | + | chr5.4:21539225-21539244 | MS.gene070886:intron | 45.0% |
!!! | ACTAGTCTTGGATTTTGGGC+TGG | + | chr5.4:21537137-21537156 | MS.gene070886:CDS | 45.0% |
!!! | GCAGGACTAGTCTTGGATTT+TGG | + | chr5.4:21537132-21537151 | MS.gene070886:intron | 45.0% |
!! | ATATTATATTAATTCTTAAA+GGG | - | chr5.4:21540347-21540366 | None:intergenic | 5.0% |
!! | TATATTATATTAATTCTTAA+AGG | - | chr5.4:21540348-21540367 | None:intergenic | 5.0% |
ACCGAATCAGTAGAGCTACC+GGG | + | chr5.4:21537234-21537253 | MS.gene070886:CDS | 50.0% | |
AGCCATTTGCTCTTCCAGCT+GGG | + | chr5.4:21536561-21536580 | MS.gene070886:CDS | 50.0% | |
AGGTAGCTGCTATGGCGTAA+CGG | - | chr5.4:21539427-21539446 | None:intergenic | 50.0% | |
ATGCTTCTCGGTACCAATGG+TGG | - | chr5.4:21539131-21539150 | None:intergenic | 50.0% | |
CAAAGAAGTGATCAGCACCC+AGG | - | chr5.4:21536403-21536422 | None:intergenic | 50.0% | |
CAAATGGCTGCAGCACTTGA+GGG | - | chr5.4:21536550-21536569 | None:intergenic | 50.0% | |
CAAGCTGAATTTCGCGGAGA+TGG | + | chr5.4:21534917-21534936 | MS.gene070886:CDS | 50.0% | |
CACACTCTCTTCTCTCTTCG+TGG | + | chr5.4:21534479-21534498 | MS.gene070886:CDS | 50.0% | |
CACGAAGAGAGAAGAGAGTG+TGG | - | chr5.4:21534481-21534500 | None:intergenic | 50.0% | |
CACTCTTCAGTATGTGAGGC+TGG | + | chr5.4:21540182-21540201 | MS.gene070886:intron | 50.0% | |
CAGACACCAAGGAAGCTTAC+TGG | + | chr5.4:21534993-21535012 | MS.gene070886:CDS | 50.0% | |
CCCAGGGTTCTGTTCCAATA+AGG | - | chr5.4:21536386-21536405 | None:intergenic | 50.0% | |
GGAAATCAGGCACATGGTTG+TGG | - | chr5.4:21538508-21538527 | None:intergenic | 50.0% | |
GGGAGAGCAACATCTTTGTG+TGG | - | chr5.4:21536530-21536549 | None:intergenic | 50.0% | |
GTCATGCTTCTCGGTACCAA+TGG | - | chr5.4:21539134-21539153 | None:intergenic | 50.0% | |
GTTGGTGTAAGGGCAACAGA+AGG | + | chr5.4:21536437-21536456 | MS.gene070886:CDS | 50.0% | |
TACAAGGAGAGTTGGGAGGT+AGG | - | chr5.4:21538647-21538666 | None:intergenic | 50.0% | |
TCGGACTCTTGATCCTGATC+AGG | + | chr5.4:21535067-21535086 | MS.gene070886:CDS | 50.0% | |
TGCTCCCCAAGCTATGATGT+TGG | + | chr5.4:21536497-21536516 | MS.gene070886:CDS | 50.0% | |
TGCTTCTCGGTACCAATGGT+GGG | - | chr5.4:21539130-21539149 | None:intergenic | 50.0% | |
TTATGCTGTGGCCCAGATCT+GGG | + | chr5.4:21535434-21535453 | MS.gene070886:intron | 50.0% | |
TTATTGTGCTGAGGGGATCG+GGG | + | chr5.4:21539196-21539215 | MS.gene070886:intron | 50.0% | |
! | AGGGAAGGTGTAAGAGTGTG+AGG | + | chr5.4:21538696-21538715 | MS.gene070886:intron | 50.0% |
! | TATATGCCCTGGTGGATCAC+AGG | + | chr5.4:21537298-21537317 | MS.gene070886:CDS | 50.0% |
!! | GAAGGACTGGTCATGCTTCT+CGG | - | chr5.4:21539143-21539162 | None:intergenic | 50.0% |
!! | GTGGTTTGCAGGACTAGTCT+TGG | + | chr5.4:21537125-21537144 | MS.gene070886:intron | 50.0% |
CAGCCATTTGCTCTTCCAGC+TGG | + | chr5.4:21536560-21536579 | MS.gene070886:CDS | 55.0% | |
CATTTGCTCTTCCAGCTGGG+GGG | + | chr5.4:21536564-21536583 | MS.gene070886:CDS | 55.0% | |
CCATTTGCTCTTCCAGCTGG+GGG | + | chr5.4:21536563-21536582 | MS.gene070886:CDS | 55.0% | |
GCAAATGGCTGCAGCACTTG+AGG | - | chr5.4:21536551-21536570 | None:intergenic | 55.0% | |
GCCATTTGCTCTTCCAGCTG+GGG | + | chr5.4:21536562-21536581 | MS.gene070886:CDS | 55.0% | |
GGTCAGGAGCAGAAATGCTC+TGG | - | chr5.4:21538376-21538395 | None:intergenic | 55.0% | |
GTTATGCTGTGGCCCAGATC+TGG | + | chr5.4:21535433-21535452 | MS.gene070886:intron | 55.0% | |
TCTACATCATTCCCCCCAGC+TGG | - | chr5.4:21536578-21536597 | None:intergenic | 55.0% | |
TGACTGGAGGCGAATTCCAC+TGG | - | chr5.4:21540549-21540568 | None:intergenic | 55.0% | |
! | GCCCGGTAGCTCTACTGATT+CGG | - | chr5.4:21537238-21537257 | None:intergenic | 55.0% |
! | TGGTGTGATGGCGTAACCAG+AGG | - | chr5.4:21540603-21540622 | None:intergenic | 55.0% |
CCCCCAGCTGGAAGAGCAAA+TGG | - | chr5.4:21536566-21536585 | None:intergenic | 60.0% | |
CTGTGGCCCAGATCTGGGTT+TGG | + | chr5.4:21535439-21535458 | MS.gene070886:intron | 60.0% | |
GACGGAGCAGGTAGCTGCTA+TGG | - | chr5.4:21539435-21539454 | None:intergenic | 60.0% | |
GGAGAGTTGGGAGGTAGGTG+AGG | - | chr5.4:21538642-21538661 | None:intergenic | 60.0% | |
! | TGGGGAGCACACTGCTCGAA+TGG | - | chr5.4:21536486-21536505 | None:intergenic | 60.0% |
!! | GAGGGGATCGGGGTTAGTTG+TGG | + | chr5.4:21539206-21539225 | MS.gene070886:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.4 | gene | 21534440 | 21540633 | 21534440 | ID=MS.gene070886 |
chr5.4 | mRNA | 21534440 | 21540633 | 21534440 | ID=MS.gene070886.t1;Parent=MS.gene070886 |
chr5.4 | exon | 21534440 | 21534580 | 21534440 | ID=MS.gene070886.t1.exon1;Parent=MS.gene070886.t1 |
chr5.4 | CDS | 21534440 | 21534580 | 21534440 | ID=cds.MS.gene070886.t1;Parent=MS.gene070886.t1 |
chr5.4 | exon | 21534819 | 21535136 | 21534819 | ID=MS.gene070886.t1.exon2;Parent=MS.gene070886.t1 |
chr5.4 | CDS | 21534819 | 21535136 | 21534819 | ID=cds.MS.gene070886.t1;Parent=MS.gene070886.t1 |
chr5.4 | exon | 21536317 | 21536603 | 21536317 | ID=MS.gene070886.t1.exon3;Parent=MS.gene070886.t1 |
chr5.4 | CDS | 21536317 | 21536603 | 21536317 | ID=cds.MS.gene070886.t1;Parent=MS.gene070886.t1 |
chr5.4 | exon | 21537136 | 21537368 | 21537136 | ID=MS.gene070886.t1.exon4;Parent=MS.gene070886.t1 |
chr5.4 | CDS | 21537136 | 21537368 | 21537136 | ID=cds.MS.gene070886.t1;Parent=MS.gene070886.t1 |
chr5.4 | exon | 21539926 | 21540083 | 21539926 | ID=MS.gene070886.t1.exon5;Parent=MS.gene070886.t1 |
chr5.4 | CDS | 21539926 | 21540083 | 21539926 | ID=cds.MS.gene070886.t1;Parent=MS.gene070886.t1 |
chr5.4 | exon | 21540532 | 21540633 | 21540532 | ID=MS.gene070886.t1.exon6;Parent=MS.gene070886.t1 |
chr5.4 | CDS | 21540532 | 21540633 | 21540532 | ID=cds.MS.gene070886.t1;Parent=MS.gene070886.t1 |
Gene Sequence |
Protein sequence |