AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene58027

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene58027.t1 MTR_4g115540 91.163 430 37 1 1 430 200 628 0.0 814
MS.gene58027.t1 MTR_4g115540 67.365 334 105 2 391 720 206 539 2.22e-161 480
MS.gene58027.t1 MTR_4g115540 94.955 337 16 1 1 337 200 535 0.0 671
MS.gene58027.t1 MTR_4g115540 66.272 338 110 2 383 716 198 535 2.25e-159 472
MS.gene58027.t1 MTR_4g115530 94.754 305 16 0 416 720 1 305 0.0 612
MS.gene58027.t1 MTR_4g115530 68.814 388 119 1 35 422 1 386 0.0 568
MS.gene58027.t1 MTR_4g115530 96.414 251 9 0 470 720 1 251 1.63e-179 516
MS.gene58027.t1 MTR_4g115530 71.084 332 96 0 91 422 1 332 1.32e-175 506
MS.gene58027.t1 MTR_4g115460 57.538 398 162 4 27 422 66 458 5.05e-164 481
MS.gene58027.t1 MTR_4g115460 55.627 311 131 4 413 720 71 377 8.22e-115 354
MS.gene58027.t1 MTR_7g103270 49.507 406 194 3 21 426 4 398 3.32e-137 410
MS.gene58027.t1 MTR_7g103270 55.082 305 128 5 416 720 18 313 1.37e-109 338
MS.gene58027.t1 MTR_7g103260 51.813 386 173 6 38 422 20 393 5.50e-135 404
MS.gene58027.t1 MTR_7g103260 53.420 307 134 4 414 720 15 312 1.28e-109 338
MS.gene58027.t1 MTR_1g061760 50.777 386 178 6 38 422 106 480 4.88e-128 389
MS.gene58027.t1 MTR_1g061760 50.482 311 142 6 412 720 99 399 1.94e-99 315
MS.gene58027.t1 MTR_3g097310 49.010 404 196 5 22 422 91 487 3.43e-125 382
MS.gene58027.t1 MTR_3g097310 48.387 310 153 4 412 720 103 406 2.88e-91 294
MS.gene58027.t1 MTR_3g081240 48.843 389 190 3 37 422 60 442 2.20e-124 379
MS.gene58027.t1 MTR_3g081240 47.883 307 149 3 418 719 60 360 5.04e-90 289
MS.gene58027.t1 MTR_3g080690 48.711 388 190 4 37 422 60 440 3.91e-123 375
MS.gene58027.t1 MTR_3g080690 47.869 305 150 4 418 719 60 358 2.89e-89 287
MS.gene58027.t1 MTR_3g106690 50.147 341 163 3 84 422 52 387 3.35e-117 358
MS.gene58027.t1 MTR_3g106690 52.692 260 116 3 463 720 52 306 2.23e-90 288
MS.gene58027.t1 MTR_7g103150 41.161 379 193 10 41 411 114 470 5.67e-85 277
MS.gene58027.t1 MTR_7g103150 36.808 307 166 11 422 720 114 400 3.56e-52 189
MS.gene58027.t1 MTR_3g110198 38.333 420 225 11 14 411 172 579 1.90e-82 274
MS.gene58027.t1 MTR_3g110198 36.570 309 170 10 421 720 218 509 5.61e-52 191
MS.gene58027.t1 MTR_1g006600 40.000 375 203 6 41 411 216 572 2.48e-82 273
MS.gene58027.t1 MTR_1g006600 37.319 276 150 7 454 720 241 502 5.27e-52 190
MS.gene58027.t1 MTR_1g090733 39.535 344 181 6 77 411 208 533 2.85e-81 269
MS.gene58027.t1 MTR_1g090733 34.667 300 168 8 430 720 183 463 1.98e-53 194
MS.gene58027.t1 MTR_8g102840 37.270 381 208 8 40 411 237 595 8.57e-78 262
MS.gene58027.t1 MTR_8g102840 36.842 285 159 7 443 720 255 525 4.14e-51 188
MS.gene58027.t1 MTR_3g110200 41.228 342 182 9 77 411 247 576 1.71e-77 260
MS.gene58027.t1 MTR_3g110200 38.828 273 146 8 456 720 247 506 1.27e-53 195
MS.gene58027.t1 MTR_4g100730 38.947 380 202 9 43 411 161 521 1.06e-75 254
MS.gene58027.t1 MTR_4g100730 38.406 276 149 7 456 720 186 451 1.43e-55 199
MS.gene58027.t1 MTR_5g031480 34.985 343 201 7 75 411 74 400 5.84e-67 227
MS.gene58027.t1 MTR_5g031480 34.050 279 164 6 454 727 74 337 5.75e-48 175
MS.gene58027.t1 MTR_5g049790 35.398 339 189 8 75 411 110 420 2.10e-63 218
MS.gene58027.t1 MTR_5g049790 35.145 276 151 8 454 727 110 359 8.38e-48 175
MS.gene58027.t1 MTR_8g102840 36.184 304 163 8 40 334 237 518 3.64e-56 201
MS.gene58027.t1 MTR_8g102840 36.559 279 156 7 443 714 255 519 1.76e-49 182
MS.gene58027.t1 MTR_7g085840 36.556 331 175 11 91 408 1 309 3.67e-51 181
MS.gene58027.t1 MTR_7g085840 31.955 266 155 11 470 727 1 248 1.23e-28 117
MS.gene58027.t1 MTR_5g031480 34.686 271 157 6 454 719 74 329 1.60e-48 174
MS.gene58027.t1 MTR_5g031480 32.967 273 161 7 75 341 74 330 1.87e-44 163
MS.gene58027.t1 MTR_5g031480 34.686 271 157 6 454 719 74 329 1.70e-48 174
MS.gene58027.t1 MTR_5g031480 32.721 272 161 7 75 340 74 329 8.59e-44 161
MS.gene58027.t1 MTR_5g049790 36.199 221 124 5 454 672 110 315 3.45e-39 148
MS.gene58027.t1 MTR_5g049790 32.889 225 133 5 75 297 110 318 7.81e-35 135
MS.gene58027.t1 MTR_5g049790 36.199 221 124 5 454 672 127 332 3.46e-39 148
MS.gene58027.t1 MTR_5g049790 32.889 225 133 5 75 297 127 335 1.09e-34 135
MS.gene58027.t1 MTR_2g084245 26.627 338 191 15 89 391 83 398 9.17e-24 105
MS.gene58027.t1 MTR_8g096160 24.038 312 204 7 107 386 41 351 1.49e-21 98.2
MS.gene58027.t1 MTR_8g096160 27.347 245 139 8 510 720 67 306 3.36e-15 79.0
MS.gene58027.t1 MTR_8g096140 23.032 343 229 8 107 415 41 382 1.66e-21 98.2
MS.gene58027.t1 MTR_8g096140 26.939 245 140 8 510 720 67 306 9.73e-15 77.4
MS.gene58027.t1 MTR_4g057500 25.414 362 226 11 92 428 104 446 2.27e-20 95.1
MS.gene58027.t1 MTR_3g037720 28.671 286 180 11 136 408 187 461 7.65e-20 94.0
MS.gene58027.t1 MTR_1g097090 30.034 293 171 11 142 411 145 426 6.16e-18 87.8
MS.gene58027.t1 MTR_1g097090 30.034 293 171 11 142 411 145 426 6.21e-18 87.8
MS.gene58027.t1 MTR_4g077920 26.154 260 159 7 170 407 144 392 2.93e-17 85.5
MS.gene58027.t1 MTR_6g027310 27.852 298 174 11 132 408 179 456 4.19e-17 85.5
MS.gene58027.t1 MTR_4g077920 24.671 304 185 9 126 407 169 450 4.77e-17 85.1
MS.gene58027.t1 MTR_4g077920 24.671 304 185 9 126 407 169 450 6.01e-17 84.7
MS.gene58027.t1 MTR_4g084200 23.875 289 184 12 136 403 160 433 2.28e-15 79.7
MS.gene58027.t1 MTR_7g087100 27.431 288 180 10 136 408 188 461 2.25e-14 77.0
MS.gene58027.t1 MTR_5g081290 30.488 164 82 5 470 629 1 136 1.59e-13 71.6
MS.gene58027.t1 MTR_5g081290 31.818 132 66 4 120 250 28 136 1.58e-12 68.9
MS.gene58027.t1 MTR_4g084200 23.929 280 177 12 136 394 160 424 1.79e-13 73.6
MS.gene58027.t1 MTR_4g084200 24.296 284 178 13 136 398 160 427 2.32e-13 73.2
MS.gene58027.t1 MTR_1g029350 24.419 344 208 12 95 406 74 397 9.12e-13 71.6
MS.gene58027.t1 MTR_8g080490 26.452 310 187 14 117 405 97 386 1.90e-12 70.5
MS.gene58027.t1 MTR_3g085480 26.613 248 150 9 175 403 152 386 7.31e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene58027.t1 AT3G42180 61.795 390 145 2 36 422 76 464 5.09e-171 499
MS.gene58027.t1 AT3G42180 57.878 311 127 2 414 720 73 383 1.77e-118 364
MS.gene58027.t1 AT5G20260 60.000 370 141 4 41 409 85 448 1.18e-168 493
MS.gene58027.t1 AT5G20260 61.333 300 111 3 422 720 85 380 1.92e-130 395
MS.gene58027.t1 AT5G33290 58.462 390 147 2 36 422 117 494 6.02e-165 484
MS.gene58027.t1 AT5G33290 59.355 310 113 2 414 720 114 413 4.87e-121 372
MS.gene58027.t1 AT3G42180 64.478 335 116 1 91 422 1 335 5.22e-159 463
MS.gene58027.t1 AT3G42180 61.024 254 96 1 470 720 1 254 7.62e-108 332
MS.gene58027.t1 AT5G11130 54.663 386 168 3 40 422 91 472 5.55e-155 458
MS.gene58027.t1 AT5G11130 57.705 305 120 3 421 720 91 391 1.41e-122 375
MS.gene58027.t1 AT5G20260 59.763 338 131 3 86 422 23 356 2.64e-151 444
MS.gene58027.t1 AT5G20260 63.424 257 89 3 465 720 23 275 2.09e-112 344
MS.gene58027.t1 AT5G20260 61.562 320 118 3 91 409 1 316 1.31e-148 436
MS.gene58027.t1 AT5G20260 63.492 252 87 3 470 720 1 248 1.21e-109 336
MS.gene58027.t1 AT5G11130 56.024 332 142 2 91 422 1 328 3.23e-141 417
MS.gene58027.t1 AT5G11130 58.984 256 101 2 470 725 1 252 3.90e-108 332
MS.gene58027.t1 AT5G03795 50.789 380 176 4 32 411 132 500 8.13e-132 400
MS.gene58027.t1 AT5G03795 51.090 321 143 5 412 727 131 442 5.55e-106 333
MS.gene58027.t1 AT3G07620 48.649 370 184 3 40 408 76 440 4.73e-124 378
MS.gene58027.t1 AT3G07620 46.535 303 154 3 421 720 76 373 9.74e-90 289
MS.gene58027.t1 AT5G25310 46.455 409 199 7 27 427 84 480 5.40e-121 371
MS.gene58027.t1 AT5G25310 48.675 302 144 5 422 720 101 394 4.53e-94 301
MS.gene58027.t1 AT4G16745 38.718 390 217 7 32 411 140 517 4.15e-86 282
MS.gene58027.t1 AT4G16745 37.072 321 178 9 413 721 140 448 5.36e-63 220
MS.gene58027.t1 AT4G16745 37.470 419 223 9 32 437 140 532 1.31e-85 282
MS.gene58027.t1 AT4G16745 37.072 321 178 9 413 721 140 448 1.59e-62 220
MS.gene58027.t1 AT5G19670 39.523 377 205 8 40 411 235 593 7.97e-85 280
MS.gene58027.t1 AT5G19670 36.496 274 152 7 456 720 263 523 8.27e-52 190
MS.gene58027.t1 AT5G19670 39.523 377 205 8 40 411 235 593 7.97e-85 280
MS.gene58027.t1 AT5G19670 36.496 274 152 7 456 720 263 523 8.27e-52 190
MS.gene58027.t1 AT5G25820 41.210 347 178 10 77 411 306 638 1.66e-77 262
MS.gene58027.t1 AT5G25820 39.785 279 140 10 456 721 306 569 3.82e-50 186
MS.gene58027.t1 AT4G32790 40.882 340 187 8 77 411 249 579 2.31e-77 260
MS.gene58027.t1 AT4G32790 38.321 274 147 8 456 720 249 509 6.30e-55 199
MS.gene58027.t1 AT4G32790 40.882 340 187 8 77 411 249 579 2.31e-77 260
MS.gene58027.t1 AT4G32790 38.321 274 147 8 456 720 249 509 6.30e-55 199
MS.gene58027.t1 AT4G32790 40.882 340 187 8 77 411 249 579 2.31e-77 260
MS.gene58027.t1 AT4G32790 38.321 274 147 8 456 720 249 509 6.30e-55 199
MS.gene58027.t1 AT5G11610 37.875 367 199 8 40 399 174 518 7.00e-74 249
MS.gene58027.t1 AT5G11610 36.422 313 160 10 421 720 174 460 4.62e-49 181
MS.gene58027.t1 AT5G37000 37.500 344 192 6 77 411 208 537 1.41e-71 243
MS.gene58027.t1 AT5G37000 35.018 277 151 7 456 720 208 467 9.53e-48 178
MS.gene58027.t1 AT4G38040 35.882 340 198 5 77 411 86 410 1.21e-66 226
MS.gene58027.t1 AT4G38040 33.220 295 175 7 438 727 70 347 4.31e-46 170
MS.gene58027.t1 AT4G38040 34.769 325 192 5 77 396 86 395 8.85e-62 213
MS.gene58027.t1 AT4G38040 34.296 277 162 6 456 727 86 347 1.89e-46 171
MS.gene58027.t1 AT5G11610 35.017 297 164 8 40 329 174 448 2.27e-48 177
MS.gene58027.t1 AT5G11610 34.219 301 159 10 421 708 174 448 1.10e-41 158
MS.gene58027.t1 AT5G11610 33.721 172 97 5 40 209 174 330 1.43e-24 106
MS.gene58027.t1 AT5G11610 32.558 172 95 6 421 587 174 329 3.35e-19 90.1
MS.gene58027.t1 AT5G61840 25.714 350 220 10 92 415 46 381 1.86e-24 107
MS.gene58027.t1 AT5G61840 27.599 279 154 11 471 720 46 305 2.85e-14 75.9
MS.gene58027.t1 AT1G27440 25.072 347 226 11 92 415 43 378 1.87e-24 107
MS.gene58027.t1 AT2G28110 23.077 416 256 14 24 408 42 424 1.39e-22 102
MS.gene58027.t1 AT1G67410 28.819 288 167 10 140 405 123 394 2.17e-20 95.1
MS.gene58027.t1 AT5G22940 24.172 302 195 11 131 408 147 438 1.06e-17 87.0
MS.gene58027.t1 AT5G22940 24.172 302 195 11 131 408 176 467 1.64e-17 86.7
MS.gene58027.t1 AT5G16890 25.146 342 198 13 99 407 140 456 1.88e-17 86.7
MS.gene58027.t1 AT1G74680 28.223 287 186 9 133 408 146 423 4.64e-17 85.1
MS.gene58027.t1 AT2G35100 22.526 293 198 9 126 403 117 395 3.51e-16 82.4
MS.gene58027.t1 AT1G21480 25.069 363 216 14 76 406 74 412 2.34e-15 79.7
MS.gene58027.t1 AT3G03650 25.000 320 203 9 109 405 158 463 3.30e-15 79.3
MS.gene58027.t1 AT1G21480 25.846 325 186 14 76 369 74 374 5.79e-15 78.2
MS.gene58027.t1 AT3G45400 28.521 284 172 11 141 408 159 427 9.85e-14 74.7
MS.gene58027.t1 AT5G44930 26.531 294 181 12 140 421 130 400 1.16e-13 74.3
MS.gene58027.t1 AT5G44930 26.531 294 181 12 140 421 130 400 1.16e-13 74.3
MS.gene58027.t1 AT1G34270 28.716 296 174 13 141 411 144 427 1.10e-12 71.6
MS.gene58027.t1 AT5G44930 26.866 268 165 11 140 393 130 380 2.72e-12 69.7

Find 156 sgRNAs with CRISPR-Local

Find 337 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAATGCTACTGTTTGCTTTA+TGG 0.100371 8.3:-11020837 None:intergenic
GCTAAGATTGTTCGGTTATT+AGG 0.113139 8.3:-11026183 None:intergenic
GGATTTGCATCTGAGATTTC+TGG 0.154159 8.3:-11022600 None:intergenic
ATCAATGAATTGACCTTCTA+TGG 0.170506 8.3:-11025650 None:intergenic
TAGCATAAAGAGCCCCTTTA+AGG 0.188086 8.3:+11021607 MS.gene58027:CDS
CATGGTGGTTGTATACTTCT+TGG 0.188538 8.3:-11025308 None:intergenic
ATGGAATATTTGTTGTTTAC+AGG 0.206569 8.3:-11025631 None:intergenic
CTGAAGGGTTCCAGCCTAAA+AGG 0.211097 8.3:+11022670 MS.gene58027:CDS
TCAAAACTATACACAATTAA+TGG 0.213424 8.3:+11022884 MS.gene58027:CDS
TTGCTGATAAGTATCCTTAT+TGG 0.220100 8.3:+11021774 MS.gene58027:CDS
TTAATTGCTTCCACAATTCT+TGG 0.224629 8.3:-11022954 None:intergenic
ACTAGGGTGCTTAGCCTTAA+AGG 0.225671 8.3:-11021621 None:intergenic
ACCACATTTGCAACACTAAA+AGG 0.233973 8.3:-11021665 None:intergenic
AAAGTTAGGCCCACCAAATC+TGG 0.280032 8.3:+11022728 MS.gene58027:CDS
TAAGCCAATTATGTCCAAAA+AGG 0.281177 8.3:+11021700 MS.gene58027:CDS
TTCTCCTCTCTTGTCATGAC+TGG 0.282575 8.3:+11021822 MS.gene58027:CDS
TGGTGAAGAGATTGAAGATA+TGG 0.283644 8.3:+11021492 MS.gene58027:CDS
CTAAGATTGTTCGGTTATTA+GGG 0.296027 8.3:-11026182 None:intergenic
AGCATGTGGATTCAAGTAAA+TGG 0.303115 8.3:-11025356 None:intergenic
TCTTCCTTTCAGTGTGTCTA+AGG 0.305484 8.3:+11025738 MS.gene58027:CDS
TTCAAGTAAATGGACCCTTT+TGG 0.310102 8.3:-11025346 None:intergenic
TTCTGCTTTCATGCCATGAT+TGG 0.310677 8.3:+11025899 MS.gene58027:CDS
TAATCTGATCTAGACCTTCT+AGG 0.312051 8.3:-11025781 None:intergenic
AAGAAAACATGGGCCAATTC+AGG 0.312175 8.3:-11025715 None:intergenic
GAGAAAGAATATGACTAGTT+TGG 0.322408 8.3:+11025228 MS.gene58027:CDS
TTGCAAACAAGTATCCTTAC+TGG 0.323012 8.3:+11025851 MS.gene58027:CDS
TTTGTATAATCTTGACCTTT+TGG 0.324099 8.3:-11026300 None:intergenic
ATGAAGTACTTGAAGAGTTT+AGG 0.325716 8.3:-11026045 None:intergenic
GCTAATGTGGTTCTGTTTGA+TGG 0.329668 8.3:-11022759 None:intergenic
TAAAGCAAACAGTAGCATTA+AGG 0.331229 8.3:+11020840 MS.gene58027:CDS
TGGAACAAAACTCTGTTTCA+TGG 0.342176 8.3:-11025326 None:intergenic
TTAGGGTGTTGGTCCGTATT+AGG 0.344378 8.3:-11026165 None:intergenic
CCATTACTTCTATTCCAATA+AGG 0.353414 8.3:-11021788 None:intergenic
GAAAATTGTTACTAAATCAT+TGG 0.357368 8.3:+11022814 MS.gene58027:CDS
GGATAGAGTTGAAGAAAGTT+TGG 0.364095 8.3:+11020979 MS.gene58027:CDS
CCAACTGGTAAGTACACTTC+AGG 0.370355 8.3:-11022705 None:intergenic
CAAAACTATACACAATTAAT+GGG 0.375555 8.3:+11022885 MS.gene58027:CDS
AACTCTTCAAGTACTTCATC+AGG 0.375868 8.3:+11026049 MS.gene58027:CDS
GATGGGCTTTGGCCCAGATT+TGG 0.381038 8.3:-11022741 None:intergenic
TTCGAGAAGCAATTCTTTCA+AGG 0.382330 8.3:+11021020 MS.gene58027:CDS
AACAACAAATATTCCATAGA+AGG 0.388076 8.3:+11025637 MS.gene58027:CDS
TGGTTCTGTTTGATGGGCTT+TGG 0.388867 8.3:-11022752 None:intergenic
TAAATTGCTTCCACCACTCT+TGG 0.394443 8.3:-11026378 None:intergenic
CTAGGGTGCTTAGCCTTAAA+GGG 0.394806 8.3:-11021620 None:intergenic
CTTTCAATGATGTGTTGAAT+TGG 0.396648 8.3:+11023021 MS.gene58027:CDS
GGCTTTGGCCCAGATTTGGT+GGG 0.396783 8.3:-11022737 None:intergenic
TTCTGTAGATGGACCCTCTT+GGG 0.399902 8.3:-11021081 None:intergenic
CAAGGCAACTCATCCTGAAT+TGG 0.402788 8.3:+11025702 MS.gene58027:CDS
AATGGTCCATCATGTACTAT+TGG 0.409324 8.3:-11021536 None:intergenic
CATGGCATGAAAGCAGAAAA+TGG 0.410042 8.3:-11025894 None:intergenic
TGGTGAAGAGATTCAAGGTA+TGG 0.410347 8.3:+11025569 MS.gene58027:CDS
TCAGGATGAGTTGCCTTGAA+TGG 0.417478 8.3:-11025697 None:intergenic
CTTAACTGATGAAAAGCATA+TGG 0.424295 8.3:-11021106 None:intergenic
GGGCTTTGGCCCAGATTTGG+TGG 0.426206 8.3:-11022738 None:intergenic
ATTGCATATATGTTGTTCAA+TGG 0.428434 8.3:-11021554 None:intergenic
AATTTGCCTGTTGGAAAGCT+TGG 0.429513 8.3:+11026138 MS.gene58027:CDS
AGCATATGGATTTCTGTAGA+TGG 0.431080 8.3:-11021092 None:intergenic
CATGACAAGAGAGGAGAAAA+TGG 0.431578 8.3:-11021817 None:intergenic
TCAAGATTATACAAAGTTGA+TGG 0.431813 8.3:+11026308 MS.gene58027:CDS
TCTGCTTTCATGCCATGATT+GGG 0.454591 8.3:+11025900 MS.gene58027:CDS
AAGAATTGCTTCTCGAATTG+AGG 0.456346 8.3:-11021014 None:intergenic
TACTTACCAGTTGGAAAGTT+AGG 0.456933 8.3:+11022714 MS.gene58027:CDS
AAAGCTTGGCCCACCTAATA+CGG 0.457453 8.3:+11026152 MS.gene58027:CDS
GCTATGTTTACAAGCCTAGA+AGG 0.461991 8.3:+11025767 MS.gene58027:CDS
CTAATGTGGTTCTGTTTGAT+GGG 0.466560 8.3:-11022758 None:intergenic
TTTCTGTAGATGGACCCTCT+TGG 0.471285 8.3:-11021082 None:intergenic
CTTGCCACTTCATGTCCACT+AGG 0.472231 8.3:-11026354 None:intergenic
ATCATGTGCATCACATCAAA+AGG 0.472300 8.3:-11023188 None:intergenic
GCAGAAAATTATGACTAGCT+TGG 0.478762 8.3:+11020958 MS.gene58027:intron
GGTGGGCCTAACTTTCCAAC+TGG 0.479077 8.3:-11022720 None:intergenic
CCTCAGTTGAATTTGCCTGT+TGG 0.479114 8.3:+11026129 MS.gene58027:CDS
AACAACATATATGCAATTGA+AGG 0.484931 8.3:+11021560 MS.gene58027:CDS
TGCAATGCAAACACTTCTGA+AGG 0.485857 8.3:+11022654 MS.gene58027:CDS
GGAATTACAGTACTACTTCA+AGG 0.486167 8.3:+11021041 MS.gene58027:CDS
TCTCCTCTCTTGTCATGACT+GGG 0.487831 8.3:+11021823 MS.gene58027:CDS
CCTTGACTTCTGTTCCAGTA+AGG 0.489828 8.3:-11025865 None:intergenic
GGATTAGCATAAGAAACTCT+TGG 0.489867 8.3:-11026024 None:intergenic
GGTGGGCCAAGCTTTCCAAC+AGG 0.495256 8.3:-11026144 None:intergenic
CATTGATTCAGAAAGCAATT+CGG 0.499790 8.3:+11025284 MS.gene58027:CDS
AGTTTGGAGAGGATTGAAGA+AGG 0.501327 8.3:+11025244 MS.gene58027:CDS
ATCACATCAAAAGGCTTAGC+AGG 0.501383 8.3:-11023179 None:intergenic
GGGATGGACACATCTCTGTT+AGG 0.505237 8.3:-11026108 None:intergenic
GGGTGTTGGTCCGTATTAGG+TGG 0.506106 8.3:-11026162 None:intergenic
TGAAGGGTTCCAGCCTAAAA+GGG 0.509729 8.3:+11022671 MS.gene58027:CDS
AAGTAACAAGAGTCCATTCA+AGG 0.512022 8.3:+11025684 MS.gene58027:CDS
ATGGGCCCCACCAGAAAAGA+AGG 0.516521 8.3:-11022781 None:intergenic
CAACTGGTAAGTACACTTCA+GGG 0.516975 8.3:-11022704 None:intergenic
GTGGTGGAAGCAATTTATGC+AGG 0.521001 8.3:+11026384 MS.gene58027:CDS
GGTGAAGAGATTGAAGATAT+GGG 0.523274 8.3:+11021493 MS.gene58027:CDS
AAGATATGGGTATACAAAGA+AGG 0.523825 8.3:+11021506 MS.gene58027:CDS
TGCAATGCCAACACCTCAGA+AGG 0.539598 8.3:+11026078 MS.gene58027:CDS
GTTCATGAGTACCTTCCAAA+AGG 0.540735 8.3:+11026285 MS.gene58027:CDS
ATTGTGAACCTACCCAATCA+TGG 0.544637 8.3:-11025912 None:intergenic
GGAGATGGTGAAGAGATTCA+AGG 0.550146 8.3:+11025564 MS.gene58027:CDS
CTAGCCACTTCATATCCACT+TGG 0.551352 8.3:-11022930 None:intergenic
TTGTTCGGTTATTAGGGTGT+TGG 0.552565 8.3:-11026176 None:intergenic
CCTTATTGGAATAGAAGTAA+TGG 0.555785 8.3:+11021788 MS.gene58027:CDS
ATTGTTACTAAATCATTGGA+AGG 0.556809 8.3:+11022818 MS.gene58027:CDS
ATTCAAGGTATGGGTATACA+AGG 0.558498 8.3:+11025579 MS.gene58027:CDS
ATTGTGGAAGCAATTAATGC+TGG 0.559680 8.3:+11022960 MS.gene58027:CDS
GTTCATGAGTATCTTCCAAA+GGG 0.560213 8.3:+11022861 MS.gene58027:CDS
AAGTTAGGCCCACCAAATCT+GGG 0.562454 8.3:+11022729 MS.gene58027:CDS
AGTTCATGAGTATCTTCCAA+AGG 0.571921 8.3:+11022860 MS.gene58027:CDS
GGTGAAGAGATTCAAGGTAT+GGG 0.573087 8.3:+11025570 MS.gene58027:CDS
GAGCAACCATTGGTACATGA+TGG 0.574458 8.3:+11025607 MS.gene58027:CDS
AATCAGGAGCCACATGGAGA+TGG 0.574643 8.3:+11021472 MS.gene58027:intron
ACAGGTCCATCATGTACCAA+TGG 0.576004 8.3:-11025613 None:intergenic
AAGCAGGAGCCACATGGAGA+TGG 0.576054 8.3:+11025549 MS.gene58027:intron
CAACAGGCAAATTCAACTGA+GGG 0.577993 8.3:-11026128 None:intergenic
CAAGATTATACAAAGTTGAT+GGG 0.579273 8.3:+11026309 MS.gene58027:CDS
CCTGAAGTGTACTTACCAGT+TGG 0.580840 8.3:+11022705 MS.gene58027:CDS
AGAATATGACTAGTTTGGAG+AGG 0.583515 8.3:+11025233 MS.gene58027:CDS
CAACACATCATTGAAAGGCA+AGG 0.592964 8.3:-11023015 None:intergenic
ACCAGAAAAGAAGGCTAATG+TGG 0.593736 8.3:-11022772 None:intergenic
CCGTGACAGACTTCATAGAA+TGG 0.594603 8.3:+11021730 MS.gene58027:CDS
CCCCTAAAGCAGGAGCCACA+TGG 0.595531 8.3:+11025543 MS.gene58027:intron
CAATTCAACACATCATTGAA+AGG 0.595885 8.3:-11023020 None:intergenic
TGAAAGGAAGAAAGAAAACA+TGG 0.600510 8.3:-11025726 None:intergenic
GGTGTTGGTCCGTATTAGGT+GGG 0.600847 8.3:-11026161 None:intergenic
CAGACTTCATAGAATGGTGG+AGG 0.601253 8.3:+11021736 MS.gene58027:CDS
AAAATATGTGTGCCTCACTA+GGG 0.603230 8.3:-11021637 None:intergenic
AGTGGCTAGTCCAAGAATTG+TGG 0.603331 8.3:+11022944 MS.gene58027:CDS
AAAGTTGCTCAAGAGTTGGA+AGG 0.607979 8.3:+11026242 MS.gene58027:CDS
AAGGTATGGGTATACAAGGA+AGG 0.608922 8.3:+11025583 MS.gene58027:CDS
GAGCAACCAATAGTACATGA+TGG 0.611429 8.3:+11021530 MS.gene58027:CDS
GATCAGATTATGATCCTCAT+CGG 0.612394 8.3:+11025794 MS.gene58027:CDS
GCTCAAGAGTTGGAAGGACA+AGG 0.614766 8.3:+11026248 MS.gene58027:CDS
CTTAACTGGTGAAAAGCATG+TGG 0.618087 8.3:-11025370 None:intergenic
AGGCAAATTCAACTGAGGGA+TGG 0.618149 8.3:-11026124 None:intergenic
CCTTACTGGAACAGAAGTCA+AGG 0.623942 8.3:+11025865 MS.gene58027:CDS
TAATTCTGAGAAATAATCAC+AGG 0.625097 8.3:-11022990 None:intergenic
TGAAGTGGCAAGTCCAAGAG+TGG 0.628625 8.3:+11026365 MS.gene58027:CDS
ATCTCTTCACCATCTCCATG+TGG 0.632190 8.3:-11021481 None:intergenic
CAAGGAAGGAGAGCAACCAT+TGG 0.632800 8.3:+11025597 MS.gene58027:CDS
TATGAAAATCAGGAGCCACA+TGG 0.634197 8.3:+11021466 MS.gene58027:intron
CCATTCTATGAAGTCTGTCA+CGG 0.635986 8.3:-11021730 None:intergenic
GCAATGCAAACACTTCTGAA+GGG 0.639377 8.3:+11022655 MS.gene58027:CDS
TAAGGCTAAGCACCCTAGTG+AGG 0.639574 8.3:+11021625 MS.gene58027:CDS
CATTTGCAACACTAAAAGGA+AGG 0.639783 8.3:-11021661 None:intergenic
ATCTCTTCACCATCTCCATG+TGG 0.641124 8.3:-11025558 None:intergenic
CCAACAGGCAAATTCAACTG+AGG 0.641348 8.3:-11026129 None:intergenic
AGTGGCAAGTCCAAGAGTGG+TGG 0.644424 8.3:+11026368 MS.gene58027:CDS
TTGCCACTTCATGTCCACTA+GGG 0.651832 8.3:-11026353 None:intergenic
GTGCCCTAGTGGACATGAAG+TGG 0.657996 8.3:+11026350 MS.gene58027:CDS
TAGGGTGCTTAGCCTTAAAG+GGG 0.661969 8.3:-11021619 None:intergenic
ACTCTTCAAGTACTTCATCA+GGG 0.662235 8.3:+11026050 MS.gene58027:CDS
ATGACCTTAGACACACTGAA+AGG 0.663561 8.3:-11025742 None:intergenic
ACTAAAAGCTGTAACCGATG+AGG 0.669918 8.3:-11025808 None:intergenic
TTGTGGAAGCAATTAATGCT+GGG 0.670500 8.3:+11022961 MS.gene58027:CDS
TTATAAGTCAGAAACTGATG+AGG 0.671606 8.3:-11020793 None:intergenic
GTGTCCAAGTGGATATGAAG+TGG 0.679823 8.3:+11022926 MS.gene58027:CDS
GAAAGGAAGAAAGAAAACAT+GGG 0.682085 8.3:-11025725 None:intergenic
TGACAGACTTCATAGAATGG+TGG 0.684701 8.3:+11021733 MS.gene58027:CDS
TTACCCAGTCATGACAAGAG+AGG 0.688491 8.3:-11021826 None:intergenic
AACAAAACTCTGTTTCATGG+TGG 0.734190 8.3:-11025323 None:intergenic
ATTACAGTACTACTTCAAGG+AGG 0.793495 8.3:+11021044 MS.gene58027:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGCAAAATAAAATAAAAAAT+AGG - chr8.3:11022305-11022324 None:intergenic 10.0%
!! ATAAGATAAGATTATTTATT+TGG + chr8.3:11024546-11024565 MS.gene58027:intron 10.0%
!! ATGTAAGAATTAAAAAAAAT+AGG + chr8.3:11023775-11023794 MS.gene58027:intron 10.0%
!! ATTCTAATGATAATAATAAT+TGG - chr8.3:11021412-11021431 None:intergenic 10.0%
!! GCAAAATAAAATAAAAAATA+GGG - chr8.3:11022304-11022323 None:intergenic 10.0%
!!! ATTTTTATAGTAATTTAAGT+AGG - chr8.3:11025512-11025531 None:intergenic 10.0%
!!! CTTTAACTTATATATTAATA+CGG - chr8.3:11023746-11023765 None:intergenic 10.0%
!!! TTTAACTTATATATTAATAC+GGG - chr8.3:11023745-11023764 None:intergenic 10.0%
!! AAAAAAACAATACTAATTAG+TGG + chr8.3:11022013-11022032 MS.gene58027:intron 15.0%
!! ATAATAATAATTGGTTATCA+AGG - chr8.3:11021403-11021422 None:intergenic 15.0%
!! ATGAAATAGAAACTTTAATT+TGG - chr8.3:11020929-11020948 None:intergenic 15.0%
!! TTAACTTATATATTAATACG+GGG - chr8.3:11023744-11023763 None:intergenic 15.0%
!!! AAAGCATTTTATTTAAACTT+TGG - chr8.3:11022557-11022576 None:intergenic 15.0%
!!! AACTAAAGTTATTTTATACA+TGG + chr8.3:11024808-11024827 MS.gene58027:intron 15.0%
!!! CATAATTTTAGAAAAAAACA+AGG - chr8.3:11021450-11021469 None:intergenic 15.0%
!!! GTTTTTCTAAAAATACATTA+TGG - chr8.3:11022349-11022368 None:intergenic 15.0%
!!! TTTATTTTTTGTTTTCAGTT+TGG + chr8.3:11025199-11025218 MS.gene58027:intron 15.0%
!!! TTTCTAAAATTATGAAAATC+AGG + chr8.3:11021456-11021475 MS.gene58027:intron 15.0%
!!! TTTTACTCATATATTAGTAA+CGG - chr8.3:11023803-11023822 None:intergenic 15.0%
!! AAAATACAAGGAAAAAATTG+AGG - chr8.3:11024942-11024961 None:intergenic 20.0%
!! AATTAACTACTAACATTTGT+CGG - chr8.3:11023368-11023387 None:intergenic 20.0%
!! ACAATAATATAAGTCAAACA+TGG + chr8.3:11025109-11025128 MS.gene58027:intron 20.0%
!! ATAACTCATATCAAATTACA+TGG - chr8.3:11024050-11024069 None:intergenic 20.0%
!! ATATTACAGAAACAAAGTAT+AGG + chr8.3:11026529-11026548 MS.gene58027:intron 20.0%
!! CAAAACTATACACAATTAAT+GGG + chr8.3:11022885-11022904 MS.gene58027:CDS 20.0%
!! CAAACAATGTAACAAATAAA+TGG - chr8.3:11024452-11024471 None:intergenic 20.0%
!! GAAAATTGTTACTAAATCAT+TGG + chr8.3:11022814-11022833 MS.gene58027:CDS 20.0%
!! GTAAACATTATGTATTCAAT+TGG + chr8.3:11024120-11024139 MS.gene58027:intron 20.0%
!! GTGTTATAATTAAACTTAAC+TGG - chr8.3:11025387-11025406 None:intergenic 20.0%
!! TAATTTGATATGAGTTATCT+TGG + chr8.3:11024052-11024071 MS.gene58027:intron 20.0%
!! TATTACAGAAACAAAGTATA+GGG + chr8.3:11026530-11026549 MS.gene58027:intron 20.0%
!! TCAAAACTATACACAATTAA+TGG + chr8.3:11022884-11022903 MS.gene58027:CDS 20.0%
!! TTTAACTCGTATATTAATAC+AGG - chr8.3:11023862-11023881 None:intergenic 20.0%
!! TTTACTCATATATTAGTAAC+GGG - chr8.3:11023802-11023821 None:intergenic 20.0%
!!! AAAAGCATTTTGTTATGAAT+AGG + chr8.3:11023156-11023175 MS.gene58027:CDS 20.0%
!!! AATGTATTTTTAGAAAAACC+TGG + chr8.3:11022350-11022369 MS.gene58027:intron 20.0%
!!! ATATTAAAAAGTGCTAAAGA+AGG - chr8.3:11025006-11025025 None:intergenic 20.0%
!!! ATTAAGCATCTACTAAATTT+TGG - chr8.3:11024360-11024379 None:intergenic 20.0%
!!! ATTATTGATTGTAGTGAATT+TGG + chr8.3:11022263-11022282 MS.gene58027:intron 20.0%
!!! GATTTAGTAACAATTTTCTA+AGG - chr8.3:11022812-11022831 None:intergenic 20.0%
!!! TAAAGTTATTTTATACATGG+AGG + chr8.3:11024811-11024830 MS.gene58027:intron 20.0%
!!! TATTTTCAAAATGTACATGA+TGG - chr8.3:11021976-11021995 None:intergenic 20.0%
!!! TGTAAAATAGTCTTAATTTC+TGG - chr8.3:11026507-11026526 None:intergenic 20.0%
!!! TTAGCACTTTTTAATATCAA+AGG + chr8.3:11025009-11025028 MS.gene58027:intron 20.0%
!!! TTTACTTTACTTGATAATTC+AGG + chr8.3:11022575-11022594 MS.gene58027:intron 20.0%
! AACAACAAATATTCCATAGA+AGG + chr8.3:11025637-11025656 MS.gene58027:CDS 25.0%
! AACAACATATATGCAATTGA+AGG + chr8.3:11021560-11021579 MS.gene58027:CDS 25.0%
! ACATGATACTTCATTCAATT+TGG + chr8.3:11023204-11023223 MS.gene58027:intron 25.0%
! ATTGCATATATGTTGTTCAA+TGG - chr8.3:11021557-11021576 None:intergenic 25.0%
! ATTGTTACTAAATCATTGGA+AGG + chr8.3:11022818-11022837 MS.gene58027:CDS 25.0%
! CAAAAAAAGCTAAGATTGTT+CGG - chr8.3:11026194-11026213 None:intergenic 25.0%
! CATGGAAATAAATTCAGAAT+AGG - chr8.3:11024032-11024051 None:intergenic 25.0%
! GCAATAGAAATGTTAAGTTA+AGG + chr8.3:11024380-11024399 MS.gene58027:intron 25.0%
! TAATTGTCACAAATTATCAC+TGG - chr8.3:11026417-11026436 None:intergenic 25.0%
! TATGTATTGTCGATAAAGAT+CGG + chr8.3:11022087-11022106 MS.gene58027:intron 25.0%
! TCAAGATTATACAAAGTTGA+TGG + chr8.3:11026308-11026327 MS.gene58027:CDS 25.0%
! TTTGTTACATTGTTTGCTTA+CGG + chr8.3:11024456-11024475 MS.gene58027:intron 25.0%
!! AAATCCTTTTTGGACATAAT+TGG - chr8.3:11021707-11021726 None:intergenic 25.0%
!! AGTGGAAAAAGTATATACAA+TGG + chr8.3:11022031-11022050 MS.gene58027:intron 25.0%
!! CAAGATTATACAAAGTTGAT+GGG + chr8.3:11026309-11026328 MS.gene58027:CDS 25.0%
!! TAATTCTGAGAAATAATCAC+AGG - chr8.3:11022993-11023012 None:intergenic 25.0%
!! TATAAGTCAAACATGGATTA+AGG + chr8.3:11025116-11025135 MS.gene58027:intron 25.0%
!! TATTCAACCTTGATAATCTT+TGG + chr8.3:11025146-11025165 MS.gene58027:intron 25.0%
!! TCATCATACGTTCTTTTTAT+CGG - chr8.3:11024733-11024752 None:intergenic 25.0%
!! TTTGTATAATCTTGACCTTT+TGG - chr8.3:11026303-11026322 None:intergenic 25.0%
!!! ATGGAATATTTGTTGTTTAC+AGG - chr8.3:11025634-11025653 None:intergenic 25.0%
!!! CAGACAACTTTTTAAAACAT+TGG + chr8.3:11021350-11021369 MS.gene58027:intron 25.0%
!!! TTATCAAGGTTTTAAATTGC+AGG - chr8.3:11021389-11021408 None:intergenic 25.0%
AAGATATGGGTATACAAAGA+AGG + chr8.3:11021506-11021525 MS.gene58027:CDS 30.0%
ACAAAAGCAAATGATTTCAC+TGG + chr8.3:11024158-11024177 MS.gene58027:intron 30.0%
ACGAATTTCATTCAATCAAC+AGG - chr8.3:11024699-11024718 None:intergenic 30.0%
ATCAATGAATTGACCTTCTA+TGG - chr8.3:11025653-11025672 None:intergenic 30.0%
ATCCTATGATCTTCATTTGA+AGG - chr8.3:11024970-11024989 None:intergenic 30.0%
CAAAAGCAAATGATTTCACT+GGG + chr8.3:11024159-11024178 MS.gene58027:intron 30.0%
CAATTAAGCACATCACTAAA+AGG - chr8.3:11026447-11026466 None:intergenic 30.0%
CAATTCAACACATCATTGAA+AGG - chr8.3:11023023-11023042 None:intergenic 30.0%
CCATTACTTCTATTCCAATA+AGG - chr8.3:11021791-11021810 None:intergenic 30.0%
CCTTATTGGAATAGAAGTAA+TGG + chr8.3:11021788-11021807 MS.gene58027:CDS 30.0%
CTAAGATTGTTCGGTTATTA+GGG - chr8.3:11026185-11026204 None:intergenic 30.0%
CTTTCAATGATGTGTTGAAT+TGG + chr8.3:11023021-11023040 MS.gene58027:CDS 30.0%
GAAAGGAAGAAAGAAAACAT+GGG - chr8.3:11025728-11025747 None:intergenic 30.0%
GATAATGAAAGCTCAGAAAA+TGG - chr8.3:11025942-11025961 None:intergenic 30.0%
GTAGTGAATTTGGTTATGAA+GGG + chr8.3:11022273-11022292 MS.gene58027:intron 30.0%
GTTATATGATCTCTATCCAA+TGG + chr8.3:11022205-11022224 MS.gene58027:intron 30.0%
TAAAAAGAACGTATGATGAG+AGG + chr8.3:11024734-11024753 MS.gene58027:intron 30.0%
TAAAGCAAACAGTAGCATTA+AGG + chr8.3:11020840-11020859 MS.gene58027:CDS 30.0%
TAACAGGTGAAACATTAATC+AGG - chr8.3:11024215-11024234 None:intergenic 30.0%
TAAGCCAATTATGTCCAAAA+AGG + chr8.3:11021700-11021719 MS.gene58027:CDS 30.0%
TAAGTCTATGTGATGTGATA+AGG + chr8.3:11025973-11025992 MS.gene58027:intron 30.0%
TAATGCTACTGTTTGCTTTA+TGG - chr8.3:11020840-11020859 None:intergenic 30.0%
TACAAGGAAAAAATTGAGGA+AGG - chr8.3:11024938-11024957 None:intergenic 30.0%
TGAAAGGAAGAAAGAAAACA+TGG - chr8.3:11025729-11025748 None:intergenic 30.0%
TGCAGTATATATCAAAGTCT+TGG - chr8.3:11021243-11021262 None:intergenic 30.0%
TGTAGTGAATTTGGTTATGA+AGG + chr8.3:11022272-11022291 MS.gene58027:intron 30.0%
TTAATTGCTTCCACAATTCT+TGG - chr8.3:11022957-11022976 None:intergenic 30.0%
TTATAAGTCAGAAACTGATG+AGG - chr8.3:11020796-11020815 None:intergenic 30.0%
TTGAAGGAGTGAAAAATACA+AGG - chr8.3:11024954-11024973 None:intergenic 30.0%
TTGCTGATAAGTATCCTTAT+TGG + chr8.3:11021774-11021793 MS.gene58027:CDS 30.0%
! ATGAAGTACTTGAAGAGTTT+AGG - chr8.3:11026048-11026067 None:intergenic 30.0%
! CACTTTTCCAAAGATTATCA+AGG - chr8.3:11025156-11025175 None:intergenic 30.0%
! CTTAACTGATGAAAAGCATA+TGG - chr8.3:11021109-11021128 None:intergenic 30.0%
! CTTTTAGTGATGTGCTTAAT+TGG + chr8.3:11026445-11026464 MS.gene58027:intron 30.0%
! GAGAAAGAATATGACTAGTT+TGG + chr8.3:11025228-11025247 MS.gene58027:CDS 30.0%
! TATAATCTTGACCTTTTGGA+AGG - chr8.3:11026299-11026318 None:intergenic 30.0%
!! AAATTTTGTTTGTGTCCAAG+TGG + chr8.3:11022915-11022934 MS.gene58027:CDS 30.0%
!! CATTGATTCAGAAAGCAATT+CGG + chr8.3:11025284-11025303 MS.gene58027:CDS 30.0%
!! TTTGTTTTCAGTTTGGTCAT+AGG + chr8.3:11025206-11025225 MS.gene58027:intron 30.0%
!!! AAACAGAGTTTTGTTCCAAA+AGG + chr8.3:11025331-11025350 MS.gene58027:CDS 30.0%
!!! AACAGAGTTTTGTTCCAAAA+GGG + chr8.3:11025332-11025351 MS.gene58027:CDS 30.0%
!!! ACAATCTTAGCTTTTTTTGC+TGG + chr8.3:11026195-11026214 MS.gene58027:CDS 30.0%
AAAAATATGTGTGCCTCACT+AGG - chr8.3:11021641-11021660 None:intergenic 35.0%
AAAATATGTGTGCCTCACTA+GGG - chr8.3:11021640-11021659 None:intergenic 35.0%
AACAAAACTCTGTTTCATGG+TGG - chr8.3:11025326-11025345 None:intergenic 35.0%
AACTCTTCAAGTACTTCATC+AGG + chr8.3:11026049-11026068 MS.gene58027:CDS 35.0%
AAGAATTGCTTCTCGAATTG+AGG - chr8.3:11021017-11021036 None:intergenic 35.0%
AAGGACACTAGAAAGATCAA+AGG - chr8.3:11024919-11024938 None:intergenic 35.0%
AAGTAACAAGAGTCCATTCA+AGG + chr8.3:11025684-11025703 MS.gene58027:CDS 35.0%
AATGGTCCATCATGTACTAT+TGG - chr8.3:11021539-11021558 None:intergenic 35.0%
AATTATGTTTCCCCTAAAGC+AGG + chr8.3:11025533-11025552 MS.gene58027:intron 35.0%
ACCACATTTGCAACACTAAA+AGG - chr8.3:11021668-11021687 None:intergenic 35.0%
ACTCTTCAAGTACTTCATCA+GGG + chr8.3:11026050-11026069 MS.gene58027:CDS 35.0%
AGACTAATTGAACTGCAGAA+TGG - chr8.3:11022472-11022491 None:intergenic 35.0%
AGCATATGGATTTCTGTAGA+TGG - chr8.3:11021095-11021114 None:intergenic 35.0%
AGCATGTGGATTCAAGTAAA+TGG - chr8.3:11025359-11025378 None:intergenic 35.0%
AGGACACTAGAAAGATCAAA+GGG - chr8.3:11024918-11024937 None:intergenic 35.0%
AGTCAATTCTCCATGGAAAT+TGG + chr8.3:11026468-11026487 MS.gene58027:intron 35.0%
AGTTCATGAGTATCTTCCAA+AGG + chr8.3:11022860-11022879 MS.gene58027:CDS 35.0%
ATCATGTGCATCACATCAAA+AGG - chr8.3:11023191-11023210 None:intergenic 35.0%
ATTACAGTACTACTTCAAGG+AGG + chr8.3:11021044-11021063 MS.gene58027:CDS 35.0%
ATTCAAGGTATGGGTATACA+AGG + chr8.3:11025579-11025598 MS.gene58027:CDS 35.0%
ATTGTGGAAGCAATTAATGC+TGG + chr8.3:11022960-11022979 MS.gene58027:CDS 35.0%
CATTTGCAACACTAAAAGGA+AGG - chr8.3:11021664-11021683 None:intergenic 35.0%
CTCCTTCAAATGAAGATCAT+AGG + chr8.3:11024965-11024984 MS.gene58027:intron 35.0%
CTCTTTACCTCTTCAAACAA+TGG + chr8.3:11025081-11025100 MS.gene58027:intron 35.0%
GAAAAAAGTTGCTCAAGAGT+TGG + chr8.3:11026238-11026257 MS.gene58027:CDS 35.0%
GAAATATGAATCTCCAAGCA+AGG - chr8.3:11022437-11022456 None:intergenic 35.0%
GATAGAATAAATGCCTTGCT+TGG + chr8.3:11022421-11022440 MS.gene58027:intron 35.0%
GATCAGATTATGATCCTCAT+CGG + chr8.3:11025794-11025813 MS.gene58027:CDS 35.0%
GCTAAGATTGTTCGGTTATT+AGG - chr8.3:11026186-11026205 None:intergenic 35.0%
GGAATTACAGTACTACTTCA+AGG + chr8.3:11021041-11021060 MS.gene58027:CDS 35.0%
GGATAGAGTTGAAGAAAGTT+TGG + chr8.3:11020979-11020998 MS.gene58027:CDS 35.0%
GGTGAAGAGATTGAAGATAT+GGG + chr8.3:11021493-11021512 MS.gene58027:CDS 35.0%
GTTCATGAGTATCTTCCAAA+GGG + chr8.3:11022861-11022880 MS.gene58027:CDS 35.0%
TAACAGTCCTAATGTAACCA+TGG + chr8.3:11024183-11024202 MS.gene58027:intron 35.0%
TAATCTGATCTAGACCTTCT+AGG - chr8.3:11025784-11025803 None:intergenic 35.0%
TAATTGGAGTCAATTCTCCA+TGG + chr8.3:11026461-11026480 MS.gene58027:intron 35.0%
TACTTACCAGTTGGAAAGTT+AGG + chr8.3:11022714-11022733 MS.gene58027:CDS 35.0%
TATATCCAAACTTGCCTCAA+GGG - chr8.3:11023296-11023315 None:intergenic 35.0%
TCTATCAACTCCAATTTCCA+TGG - chr8.3:11026481-11026500 None:intergenic 35.0%
TGGAACAAAACTCTGTTTCA+TGG - chr8.3:11025329-11025348 None:intergenic 35.0%
TGGTGAAGAGATTGAAGATA+TGG + chr8.3:11021492-11021511 MS.gene58027:CDS 35.0%
TTCGAGAAGCAATTCTTTCA+AGG + chr8.3:11021020-11021039 MS.gene58027:CDS 35.0%
TTGCAAACAAGTATCCTTAC+TGG + chr8.3:11025851-11025870 MS.gene58027:CDS 35.0%
TTGTGGAAGCAATTAATGCT+GGG + chr8.3:11022961-11022980 MS.gene58027:CDS 35.0%
! AAGGCATTTATTCTATCTGC+AGG - chr8.3:11022418-11022437 None:intergenic 35.0%
! ATCTCTACTATTTTCTCCAC+TGG - chr8.3:11023068-11023087 None:intergenic 35.0%
! CTAATGTGGTTCTGTTTGAT+GGG - chr8.3:11022761-11022780 None:intergenic 35.0%
! GAATTGGAGTGAATTTTCAG+TGG + chr8.3:11023037-11023056 MS.gene58027:CDS 35.0%
! GCAGAAAATTATGACTAGCT+TGG + chr8.3:11020958-11020977 MS.gene58027:intron 35.0%
! GCTCTTTACTTGATGATTCA+GGG + chr8.3:11026000-11026019 MS.gene58027:intron 35.0%
! GGATTAGCATAAGAAACTCT+TGG - chr8.3:11026027-11026046 None:intergenic 35.0%
! TATAGTTCTTTTCTGACACC+AGG - chr8.3:11022371-11022390 None:intergenic 35.0%
! TCCTTTTAGTGTTGCAAATG+TGG + chr8.3:11021664-11021683 MS.gene58027:CDS 35.0%
! TTCAAGTAAATGGACCCTTT+TGG - chr8.3:11025349-11025368 None:intergenic 35.0%
!! AGAATATGACTAGTTTGGAG+AGG + chr8.3:11025233-11025252 MS.gene58027:CDS 35.0%
!! CTCTTGTGAAGTTTTTGAAG+AGG - chr8.3:11022629-11022648 None:intergenic 35.0%
!! GTGAAGTTTTTGAAGAGGTT+TGG - chr8.3:11022624-11022643 None:intergenic 35.0%
!!! ACAATTTTCTAAGGTCACCA+TGG - chr8.3:11022803-11022822 None:intergenic 35.0%
!!! ATCTTAGCTTTTTTTGCTGG+TGG + chr8.3:11026198-11026217 MS.gene58027:CDS 35.0%
!!! CAATTTTCTAAGGTCACCAT+GGG - chr8.3:11022802-11022821 None:intergenic 35.0%
!!! TCTTAGCTTTTTTTGCTGGT+GGG + chr8.3:11026199-11026218 MS.gene58027:CDS 35.0%
!!! TGTGTATAGTTTTGACCCTT+TGG - chr8.3:11022879-11022898 None:intergenic 35.0%
AAAGTTGCTCAAGAGTTGGA+AGG + chr8.3:11026242-11026261 MS.gene58027:CDS 40.0%
AACAAGCTGATCTAAGCCAT+TGG - chr8.3:11022224-11022243 None:intergenic 40.0%
AAGAAAACATGGGCCAATTC+AGG - chr8.3:11025718-11025737 None:intergenic 40.0%
AAGGTATGGGTATACAAGGA+AGG + chr8.3:11025583-11025602 MS.gene58027:CDS 40.0%
AATAGGAGTCTTCCATTCAG+GGG - chr8.3:11024015-11024034 None:intergenic 40.0%
AATTTGCCTGTTGGAAAGCT+TGG + chr8.3:11026138-11026157 MS.gene58027:CDS 40.0%
ACCAGAAAAGAAGGCTAATG+TGG - chr8.3:11022775-11022794 None:intergenic 40.0%
ACGCTTAACGTTCGTATACA+CGG - chr8.3:11023538-11023557 None:intergenic 40.0%
ACGTGAGCATCTATGTAAGT+GGG + chr8.3:11024411-11024430 MS.gene58027:intron 40.0%
ACTAAAAGCTGTAACCGATG+AGG - chr8.3:11025811-11025830 None:intergenic 40.0%
AGAATAGGAGTCTTCCATTC+AGG - chr8.3:11024017-11024036 None:intergenic 40.0%
AGCTGCTTGATATGTGTCAT+TGG + chr8.3:11025468-11025487 MS.gene58027:intron 40.0%
AGTCTGCAATCACAATTACG+CGG - chr8.3:11021296-11021315 None:intergenic 40.0%
AGTTTGGAGAGGATTGAAGA+AGG + chr8.3:11025244-11025263 MS.gene58027:CDS 40.0%
ATCACATCAAAAGGCTTAGC+AGG - chr8.3:11023182-11023201 None:intergenic 40.0%
ATCTCGACTCACAATATCAG+TGG + chr8.3:11023440-11023459 MS.gene58027:intron 40.0%
ATGACCTTAGACACACTGAA+AGG - chr8.3:11025745-11025764 None:intergenic 40.0%
ATTGTGAACCTACCCAATCA+TGG - chr8.3:11025915-11025934 None:intergenic 40.0%
CAACACATCATTGAAAGGCA+AGG - chr8.3:11023018-11023037 None:intergenic 40.0%
CAACAGGCAAATTCAACTGA+GGG - chr8.3:11026131-11026150 None:intergenic 40.0%
CAACTGGTAAGTACACTTCA+GGG - chr8.3:11022707-11022726 None:intergenic 40.0%
CATGACAAGAGAGGAGAAAA+TGG - chr8.3:11021820-11021839 None:intergenic 40.0%
CATGGCATGAAAGCAGAAAA+TGG - chr8.3:11025897-11025916 None:intergenic 40.0%
CATGGTGGTTGTATACTTCT+TGG - chr8.3:11025311-11025330 None:intergenic 40.0%
CCATTCTATGAAGTCTGTCA+CGG - chr8.3:11021733-11021752 None:intergenic 40.0%
CTATATCCAAACTTGCCTCA+AGG - chr8.3:11023297-11023316 None:intergenic 40.0%
CTGCTTCCATTCAAGTGTTA+CGG - chr8.3:11023414-11023433 None:intergenic 40.0%
GAATAGGAGTCTTCCATTCA+GGG - chr8.3:11024016-11024035 None:intergenic 40.0%
GAGCAACCAATAGTACATGA+TGG + chr8.3:11021530-11021549 MS.gene58027:CDS 40.0%
GCAATGCAAACACTTCTGAA+GGG + chr8.3:11022655-11022674 MS.gene58027:CDS 40.0%
GCTATGTTTACAAGCCTAGA+AGG + chr8.3:11025767-11025786 MS.gene58027:CDS 40.0%
GGTGAAGAGATTCAAGGTAT+GGG + chr8.3:11025570-11025589 MS.gene58027:CDS 40.0%
GTAACACTTGAATGGAAGCA+GGG + chr8.3:11023413-11023432 MS.gene58027:intron 40.0%
GTTAGGCAAAAATCCTTCTG+AGG - chr8.3:11026094-11026113 None:intergenic 40.0%
GTTCATGAGTACCTTCCAAA+AGG + chr8.3:11026285-11026304 MS.gene58027:CDS 40.0%
TAAATTGCTTCCACCACTCT+TGG - chr8.3:11026381-11026400 None:intergenic 40.0%
TAACACTTGAATGGAAGCAG+GGG + chr8.3:11023414-11023433 MS.gene58027:intron 40.0%
TAGCATAAAGAGCCCCTTTA+AGG + chr8.3:11021607-11021626 MS.gene58027:CDS 40.0%
TATGAAAATCAGGAGCCACA+TGG + chr8.3:11021466-11021485 MS.gene58027:intron 40.0%
TCCTAATGTAACCATGGCTA+TGG + chr8.3:11024189-11024208 MS.gene58027:intron 40.0%
TCTCGACTCACAATATCAGT+GGG + chr8.3:11023441-11023460 MS.gene58027:intron 40.0%
TCTGCTTTCATGCCATGATT+GGG + chr8.3:11025900-11025919 MS.gene58027:CDS 40.0%
TCTTCCTTTCAGTGTGTCTA+AGG + chr8.3:11025738-11025757 MS.gene58027:CDS 40.0%
TGACAGACTTCATAGAATGG+TGG + chr8.3:11021733-11021752 MS.gene58027:CDS 40.0%
TGCAATGCAAACACTTCTGA+AGG + chr8.3:11022654-11022673 MS.gene58027:CDS 40.0%
TGCTTCCATTCAAGTGTTAC+GGG - chr8.3:11023413-11023432 None:intergenic 40.0%
TGGTGAAGAGATTCAAGGTA+TGG + chr8.3:11025569-11025588 MS.gene58027:CDS 40.0%
TTCTGCTTTCATGCCATGAT+TGG + chr8.3:11025899-11025918 MS.gene58027:CDS 40.0%
TTGTTCGGTTATTAGGGTGT+TGG - chr8.3:11026179-11026198 None:intergenic 40.0%
! AAAGTGCTAAAGAAGGTGAG+TGG - chr8.3:11024999-11025018 None:intergenic 40.0%
! ATTTTCAGTGGAGATTCCAG+TGG + chr8.3:11023049-11023068 MS.gene58027:CDS 40.0%
! CGCTCTTTACTTGATGATTC+AGG + chr8.3:11025999-11026018 MS.gene58027:intron 40.0%
! CTGCTTGATATGTGTCATTG+GGG + chr8.3:11025470-11025489 MS.gene58027:intron 40.0%
! CTTAACTGGTGAAAAGCATG+TGG - chr8.3:11025373-11025392 None:intergenic 40.0%
! GCTAATGTGGTTCTGTTTGA+TGG - chr8.3:11022762-11022781 None:intergenic 40.0%
! GCTGCTTGATATGTGTCATT+GGG + chr8.3:11025469-11025488 MS.gene58027:intron 40.0%
! GGATTTGCATCTGAGATTTC+TGG - chr8.3:11022603-11022622 None:intergenic 40.0%
! GTCACGGTTGAAATCCTTTT+TGG - chr8.3:11021717-11021736 None:intergenic 40.0%
! TCACCTGTTAGTTTAGTGAG+TGG + chr8.3:11024225-11024244 MS.gene58027:intron 40.0%
!! AGCTTGTTGCATTGACAGTA+TGG + chr8.3:11022236-11022255 MS.gene58027:intron 40.0%
!! CAAAAATCCTTCTGAGGTGT+TGG - chr8.3:11026088-11026107 None:intergenic 40.0%
!! GTGATGTTTTTGTCCCAAGA+GGG + chr8.3:11021068-11021087 MS.gene58027:CDS 40.0%
!! TCGGTTACAGCTTTTAGTTG+AGG + chr8.3:11025813-11025832 MS.gene58027:CDS 40.0%
!!! AAGTTTTGTTTGTGCCCTAG+TGG + chr8.3:11026339-11026358 MS.gene58027:CDS 40.0%
!!! ACATTAGCCTTCTTTTCTGG+TGG + chr8.3:11022774-11022793 MS.gene58027:CDS 40.0%
!!! ACCACATTAGCCTTCTTTTC+TGG + chr8.3:11022771-11022790 MS.gene58027:CDS 40.0%
!!! ATTAGCCTTCTTTTCTGGTG+GGG + chr8.3:11022776-11022795 MS.gene58027:CDS 40.0%
!!! CATTAGCCTTCTTTTCTGGT+GGG + chr8.3:11022775-11022794 MS.gene58027:CDS 40.0%
!!! CTTAGCTTTTTTTGCTGGTG+GGG + chr8.3:11026200-11026219 MS.gene58027:CDS 40.0%
AAAAAGTTGTCTGACCGCGA+TGG - chr8.3:11021343-11021362 None:intergenic 45.0%
AAAGCTTGGCCCACCTAATA+CGG + chr8.3:11026152-11026171 MS.gene58027:CDS 45.0%
AAAGTTAGGCCCACCAAATC+TGG + chr8.3:11022728-11022747 MS.gene58027:CDS 45.0%
AAGTTAGGCCCACCAAATCT+GGG + chr8.3:11022729-11022748 MS.gene58027:CDS 45.0%
ACAGGTCCATCATGTACCAA+TGG - chr8.3:11025616-11025635 None:intergenic 45.0%
AGGCAAATTCAACTGAGGGA+TGG - chr8.3:11026127-11026146 None:intergenic 45.0%
ATCTCTTCACCATCTCCATG+TGG - chr8.3:11021484-11021503 None:intergenic 45.0%
CAAGGCAACTCATCCTGAAT+TGG + chr8.3:11025702-11025721 MS.gene58027:CDS 45.0%
CACGTGAGCATCTATGTAAG+TGG + chr8.3:11024410-11024429 MS.gene58027:intron 45.0%
CAGACTTCATAGAATGGTGG+AGG + chr8.3:11021736-11021755 MS.gene58027:CDS 45.0%
CATTAATCAGGCCATAGCCA+TGG - chr8.3:11024203-11024222 None:intergenic 45.0%
CCAACAGGCAAATTCAACTG+AGG - chr8.3:11026132-11026151 None:intergenic 45.0%
CCAACTGGTAAGTACACTTC+AGG - chr8.3:11022708-11022727 None:intergenic 45.0%
CCGTGACAGACTTCATAGAA+TGG + chr8.3:11021730-11021749 MS.gene58027:CDS 45.0%
CCTCAGTTGAATTTGCCTGT+TGG + chr8.3:11026129-11026148 MS.gene58027:CDS 45.0%
CCTGAAGTGTACTTACCAGT+TGG + chr8.3:11022705-11022724 MS.gene58027:CDS 45.0%
CCTTACTGGAACAGAAGTCA+AGG + chr8.3:11025865-11025884 MS.gene58027:CDS 45.0%
CCTTGACTTCTGTTCCAGTA+AGG - chr8.3:11025868-11025887 None:intergenic 45.0%
CGCTTAACGTTCGTATACAC+GGG - chr8.3:11023537-11023556 None:intergenic 45.0%
CGTAACACTTGAATGGAAGC+AGG + chr8.3:11023412-11023431 MS.gene58027:intron 45.0%
CTAGCAACTTCAACATGCTG+AGG + chr8.3:11021873-11021892 MS.gene58027:intron 45.0%
CTAGCCACTTCATATCCACT+TGG - chr8.3:11022933-11022952 None:intergenic 45.0%
CTCGACTCACAATATCAGTG+GGG + chr8.3:11023442-11023461 MS.gene58027:intron 45.0%
CTGCCACTCACTAAACTAAC+AGG - chr8.3:11024231-11024250 None:intergenic 45.0%
CTTGACCCGTAACACTTGAA+TGG + chr8.3:11023405-11023424 MS.gene58027:intron 45.0%
CTTTCATGCCATGATTGGGT+AGG + chr8.3:11025904-11025923 MS.gene58027:intron 45.0%
GAGCAACCATTGGTACATGA+TGG + chr8.3:11025607-11025626 MS.gene58027:CDS 45.0%
GCCATAGCCATGGTTACATT+AGG - chr8.3:11024193-11024212 None:intergenic 45.0%
GGAGATGGTGAAGAGATTCA+AGG + chr8.3:11025564-11025583 MS.gene58027:CDS 45.0%
GTAGCTGCCATTGTTTGAAG+AGG - chr8.3:11025091-11025110 None:intergenic 45.0%
GTGTCCAAGTGGATATGAAG+TGG + chr8.3:11022926-11022945 MS.gene58027:CDS 45.0%
TAAGTGTGATCTCCCCACAA+GGG + chr8.3:11025040-11025059 MS.gene58027:intron 45.0%
TATACATGGAGGTGATGCTG+AGG + chr8.3:11024822-11024841 MS.gene58027:intron 45.0%
TATTCAAATCCGCCCCTGAA+TGG + chr8.3:11024000-11024019 MS.gene58027:intron 45.0%
TCAGGATGAGTTGCCTTGAA+TGG - chr8.3:11025700-11025719 None:intergenic 45.0%
TCTCCTCTCTTGTCATGACT+GGG + chr8.3:11021823-11021842 MS.gene58027:CDS 45.0%
TGAAGGGTTCCAGCCTAAAA+GGG + chr8.3:11022671-11022690 MS.gene58027:CDS 45.0%
TGATGCTGTAACTACCATCG+CGG + chr8.3:11021326-11021345 MS.gene58027:intron 45.0%
TTACCCAGTCATGACAAGAG+AGG - chr8.3:11021829-11021848 None:intergenic 45.0%
TTCTCCTCTCTTGTCATGAC+TGG + chr8.3:11021822-11021841 MS.gene58027:CDS 45.0%
TTCTGTAGATGGACCCTCTT+GGG - chr8.3:11021084-11021103 None:intergenic 45.0%
TTTCTGTAGATGGACCCTCT+TGG - chr8.3:11021085-11021104 None:intergenic 45.0%
! AGTGGCTAGTCCAAGAATTG+TGG + chr8.3:11022944-11022963 MS.gene58027:CDS 45.0%
! ATGCTGAGGCATCTTGTCTT+GGG + chr8.3:11024836-11024855 MS.gene58027:intron 45.0%
! ATTCAGGGGCGGATTTGAAT+AGG - chr8.3:11024001-11024020 None:intergenic 45.0%
! GGGATAGACACATCCCTTTT+AGG - chr8.3:11022687-11022706 None:intergenic 45.0%
! GTGGTGGAAGCAATTTATGC+AGG + chr8.3:11026384-11026403 MS.gene58027:CDS 45.0%
! TAGACACATCCCTTTTAGGC+TGG - chr8.3:11022683-11022702 None:intergenic 45.0%
! TTCAGGGGCGGATTTGAATA+GGG - chr8.3:11024000-11024019 None:intergenic 45.0%
! TTGCCACTTCATGTCCACTA+GGG - chr8.3:11026356-11026375 None:intergenic 45.0%
!! ACTAGGGTGCTTAGCCTTAA+AGG - chr8.3:11021624-11021643 None:intergenic 45.0%
!! ATAAATGGTGCCGTCAGCTA+CGG - chr8.3:11024437-11024456 None:intergenic 45.0%
!! ATGCATGAAAGTGTCCCTTG+AGG + chr8.3:11023279-11023298 MS.gene58027:intron 45.0%
!! CGTGATGTTTTTGTCCCAAG+AGG + chr8.3:11021067-11021086 MS.gene58027:CDS 45.0%
!! CTAGGGTGCTTAGCCTTAAA+GGG - chr8.3:11021623-11021642 None:intergenic 45.0%
!! TAGGGTGCTTAGCCTTAAAG+GGG - chr8.3:11021622-11021641 None:intergenic 45.0%
!! TGGTTCTGTTTGATGGGCTT+TGG - chr8.3:11022755-11022774 None:intergenic 45.0%
!! TTAGGGTGTTGGTCCGTATT+AGG - chr8.3:11026168-11026187 None:intergenic 45.0%
!! AAAAAGTAATAAAAAAAATT+TGG + chr8.3:11023953-11023972 MS.gene58027:intron 5.0%
!! AATATTATTTAATTATTTGA+CGG - chr8.3:11023478-11023497 None:intergenic 5.0%
!! TGTATATATTAAAAAATAAT+AGG + chr8.3:11023834-11023853 MS.gene58027:intron 5.0%
AATCAGGAGCCACATGGAGA+TGG + chr8.3:11021472-11021491 MS.gene58027:intron 50.0%
AGTGTCCCTTGAGGCAAGTT+TGG + chr8.3:11023288-11023307 MS.gene58027:intron 50.0%
CAAGGAAGGAGAGCAACCAT+TGG + chr8.3:11025597-11025616 MS.gene58027:CDS 50.0%
CTGAAGGGTTCCAGCCTAAA+AGG + chr8.3:11022670-11022689 MS.gene58027:CDS 50.0%
GCTCAAGAGTTGGAAGGACA+AGG + chr8.3:11026248-11026267 MS.gene58027:CDS 50.0%
GCTCGTAAGAGCTTGTCTAC+TGG + chr8.3:11023316-11023335 MS.gene58027:intron 50.0%
GGGATGGACACATCTCTGTT+AGG - chr8.3:11026111-11026130 None:intergenic 50.0%
GTAAGTGTGATCTCCCCACA+AGG + chr8.3:11025039-11025058 MS.gene58027:intron 50.0%
TAAGGCTAAGCACCCTAGTG+AGG + chr8.3:11021625-11021644 MS.gene58027:CDS 50.0%
TCCATGTGGCTCCTGCTTTA+GGG - chr8.3:11025547-11025566 None:intergenic 50.0%
TGAAGTGGCAAGTCCAAGAG+TGG + chr8.3:11026365-11026384 MS.gene58027:CDS 50.0%
TGCAATGCCAACACCTCAGA+AGG + chr8.3:11026078-11026097 MS.gene58027:CDS 50.0%
! CTTGCCACTTCATGTCCACT+AGG - chr8.3:11026357-11026376 None:intergenic 50.0%
! GATGCTGAGGCATCTTGTCT+TGG + chr8.3:11024835-11024854 MS.gene58027:intron 50.0%
! TGCTGAGGCATCTTGTCTTG+GGG + chr8.3:11024837-11024856 MS.gene58027:intron 50.0%
!! GGTGTTGGTCCGTATTAGGT+GGG - chr8.3:11026164-11026183 None:intergenic 50.0%
!!! TTTTTTGCTGGTGGGGCACA+TGG + chr8.3:11026207-11026226 MS.gene58027:CDS 50.0%
AAGCAGGAGCCACATGGAGA+TGG + chr8.3:11025549-11025568 MS.gene58027:intron 55.0%
AGGAGTCTTCCATTCAGGGG+CGG - chr8.3:11024012-11024031 None:intergenic 55.0%
AGTGGCAAGTCCAAGAGTGG+TGG + chr8.3:11026368-11026387 MS.gene58027:CDS 55.0%
ATGGGCCCCACCAGAAAAGA+AGG - chr8.3:11022784-11022803 None:intergenic 55.0%
CACTTGAATGGAAGCAGGGG+CGG + chr8.3:11023417-11023436 MS.gene58027:intron 55.0%
CCATGTGGCTCCTGCTTTAG+GGG - chr8.3:11025546-11025565 None:intergenic 55.0%
CTCCATGTGGCTCCTGCTTT+AGG - chr8.3:11025548-11025567 None:intergenic 55.0%
GGTGGGCCTAACTTTCCAAC+TGG - chr8.3:11022723-11022742 None:intergenic 55.0%
TGTAAGTGGGCCGTAGCTGA+CGG + chr8.3:11024424-11024443 MS.gene58027:intron 55.0%
! GATGGGCTTTGGCCCAGATT+TGG - chr8.3:11022744-11022763 None:intergenic 55.0%
! GGCTTTGGCCCAGATTTGGT+GGG - chr8.3:11022740-11022759 None:intergenic 55.0%
! GGGCGGATTTGAATAGGGCA+TGG - chr8.3:11023995-11024014 None:intergenic 55.0%
! GTGCCCTAGTGGACATGAAG+TGG + chr8.3:11026350-11026369 MS.gene58027:CDS 55.0%
!! GGGTGTTGGTCCGTATTAGG+TGG - chr8.3:11026165-11026184 None:intergenic 55.0%
!! TTCTTTTCTGGTGGGGCCCA+TGG + chr8.3:11022783-11022802 MS.gene58027:CDS 55.0%
CCCCTAAAGCAGGAGCCACA+TGG + chr8.3:11025543-11025562 MS.gene58027:intron 60.0%
GGTGGGCCAAGCTTTCCAAC+AGG - chr8.3:11026147-11026166 None:intergenic 60.0%
! GGGCTTTGGCCCAGATTTGG+TGG - chr8.3:11022741-11022760 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 11020766 11026601 11020766 ID=MS.gene58027
chr8.3 mRNA 11020766 11026601 11020766 ID=MS.gene58027.t1;Parent=MS.gene58027
chr8.3 exon 11020766 11020861 11020766 ID=MS.gene58027.t1.exon1;Parent=MS.gene58027.t1
chr8.3 CDS 11020766 11020861 11020766 ID=cds.MS.gene58027.t1;Parent=MS.gene58027.t1
chr8.3 exon 11020962 11021122 11020962 ID=MS.gene58027.t1.exon2;Parent=MS.gene58027.t1
chr8.3 CDS 11020962 11021122 11020962 ID=cds.MS.gene58027.t1;Parent=MS.gene58027.t1
chr8.3 exon 11021478 11021844 11021478 ID=MS.gene58027.t1.exon3;Parent=MS.gene58027.t1
chr8.3 CDS 11021478 11021844 11021478 ID=cds.MS.gene58027.t1;Parent=MS.gene58027.t1
chr8.3 exon 11022597 11023196 11022597 ID=MS.gene58027.t1.exon4;Parent=MS.gene58027.t1
chr8.3 CDS 11022597 11023196 11022597 ID=cds.MS.gene58027.t1;Parent=MS.gene58027.t1
chr8.3 exon 11025217 11025386 11025217 ID=MS.gene58027.t1.exon5;Parent=MS.gene58027.t1
chr8.3 CDS 11025217 11025386 11025217 ID=cds.MS.gene58027.t1;Parent=MS.gene58027.t1
chr8.3 exon 11025555 11025921 11025555 ID=MS.gene58027.t1.exon6;Parent=MS.gene58027.t1
chr8.3 CDS 11025555 11025921 11025555 ID=cds.MS.gene58027.t1;Parent=MS.gene58027.t1
chr8.3 exon 11026021 11026416 11026021 ID=MS.gene58027.t1.exon7;Parent=MS.gene58027.t1
chr8.3 CDS 11026021 11026416 11026021 ID=cds.MS.gene58027.t1;Parent=MS.gene58027.t1
chr8.3 exon 11026572 11026601 11026572 ID=MS.gene58027.t1.exon8;Parent=MS.gene58027.t1
chr8.3 CDS 11026572 11026601 11026572 ID=cds.MS.gene58027.t1;Parent=MS.gene58027.t1
Gene Sequence

>MS.gene58027

ATGAATAACACAACACAAGTAATTAAACCTCATCAGTTTCTGACTTATAACTCTGCATATAGAAGCTTTGACCATAAAGCAAACAGTAGCATTAAGGTATTCATGATCAACAAAAAAAGTTTCAGCTCAAAGTTTTGTATTATCTATCTGTTTTCTCAAACCAAATTAAAGTTTCTATTTCATTGTTTGCATGCAGAAAATTATGACTAGCTTGGATAGAGTTGAAGAAAGTTTGGCAGAAGCTCGAGCCTCAATTCGAGAAGCAATTCTTTCAAGGAATTACAGTACTACTTCAAGGAGGCGTGATGTTTTTGTCCCAAGAGGGTCCATCTACAGAAATCCATATGCTTTTCATCAGTTAAGTTTGAGAAGTTCTGAATTAAAATTTCAATTGTTTTAGTCTAATTTTTAAAAATGACACTGTTGCATTTGCGACTTTGATATTATAAAAAAAATCATAATCAAATATAGTTACCAAGACTTTGATATATACTGCAAAAAATCATAGTCAAATATAGTTGACGCAACCGCGTAATTGTGATTGCAGACTTAAAAAATTGTGATGCTGTAACTACCATCGCGGTCAGACAACTTTTTAAAACATTGGATTTGTAGTTGCACCTGCAATTTAAAACCTTGATAACCAATTATTATTATCATTAGAATTTATTGCTAACAAGTCCTTGTTTTTTTCTAAAATTATGAAAATCAGGAGCCACATGGAGATGGTGAAGAGATTGAAGATATGGGTATACAAAGAAGGAGAGCAACCAATAGTACATGATGGACCATTGAACAACATATATGCAATTGAAGGTCAATTCATTGATGAAATAGACAATAGCATAAAGAGCCCCTTTAAGGCTAAGCACCCTAGTGAGGCACACATATTTTTCCTTCCTTTTAGTGTTGCAAATGTGGTTCAATATGTTTATAAGCCAATTATGTCCAAAAAGGATTTCAACCGTGACAGACTTCATAGAATGGTGGAGGATTATGTAAATGTTGTTGCTGATAAGTATCCTTATTGGAATAGAAGTAATGGTGCTGACCATTTTCTCCTCTCTTGTCATGACTGGGTAATTTTCTTGTCACTTCATTTGATTACTAGCAACTTCAACATGCTGAGGTTTATTATTGTTATTTTCATAATATGCATGTATGCACTGTCTAGTGTCTATATAACTCTGCATTAAAATTTGTTTAACCATCATGTACATTTTGAAAATATTACTAATATATACTAAAAAAAAACAATACTAATTAGTGGAAAAAGTATATACAATGGATTTGATGATGTTAGTTGCTCAATTGACAATGATATGTATTGTCGATAAAGATCGGACGATTGAGATTCTGACTTTTTGACTAGTTGAAGTCATAACGTAAACTATTTGATTTCTATCTAACAATTTAAATTTGTCGAAGTTATAATGTGAGTTATATGATCTCTATCCAATGGCTTAGATCAGCTTGTTGCATTGACAGTATGGATTAATTATTGATTGTAGTGAATTTGGTTATGAAGGGCATGTCCCTATTTTTTATTTTATTTTGCTGAAACATGTCATGATTTTAATCCATAATGTATTTTTAGAAAAACCTGGTGTCAGAAAAGAACTATATTAATTGCTGTAATTGAATTAAAACCTGCAGATAGAATAAATGCCTTGCTTGGAGATTCATATTTCATGTAATGTTTTCCATTCTGCAGTTCAATTAGTCTGACATAATAGAAATATTTTATCAACATTATAAGCTATGCTTTAAATTTTTTAATGTGTGCAACCAAAGTTTAAATAAAATGCTTTTACTTTACTTGATAATTCAGGCACCAGAAATCTCAGATGCAAATCCAAACCTCTTCAAAAACTTCACAAGAGTCTTATGCAATGCAAACACTTCTGAAGGGTTCCAGCCTAAAAGGGATGTGTCTATCCCTGAAGTGTACTTACCAGTTGGAAAGTTAGGCCCACCAAATCTGGGCCAAAGCCCATCAAACAGAACCACATTAGCCTTCTTTTCTGGTGGGGCCCATGGTGACCTTAGAAAATTGTTACTAAATCATTGGAAGGACAAAGATGCACAAGTTCAAGTTCATGAGTATCTTCCAAAGGGTCAAAACTATACACAATTAATGGGACTAAGTAAATTTTGTTTGTGTCCAAGTGGATATGAAGTGGCTAGTCCAAGAATTGTGGAAGCAATTAATGCTGGGTGTGTGCCTGTGATTATTTCTCAGAATTATTCCTTGCCTTTCAATGATGTGTTGAATTGGAGTGAATTTTCAGTGGAGATTCCAGTGGAGAAAATAGTAGAGATTAAGACTATATTACAAAATATTTCAAAAGATAAGTACATGAAGTTGCATATGAATGTGATGAAAGTTCAAAAGCATTTTGTTATGAATAGGCCTGCTAAGCCTTTTGATGTGATGCACATGATACTTCATTCAATTTGGCTTAGAAGACTTAATTTCAGACTCATTGATTCACAATAAAAAAAAGTTGTTTATGCATGAAAGTGTCCCTTGAGGCAAGTTTGGATATAGCTCGTAAGAGCTTGTCTACTGGTATTTTTGTTGAGTAACTCAAAGTCTCCGACAAATGTTAGTAGTTAATTTGTTAGAAGATGAACTTCTTGACCCGTAACACTTGAATGGAAGCAGGGGCGGATCTCGACTCACAATATCAGTGGGGCAAAAAAATTCCGTCAAATAATTAAATAATATTAAATTTAAGAGATCAATCAAATGCTCTAGCAGAATACCCGTGTATACGAACGTTAAGCGTGTTGCGCTCTTTTTTTGAAAGCAAGTCGCAGTTGCGTACGTAGTAATTAAAAATAAAATAAAAATATATGTATTGATATATGAATAAAAATATAGAGAGATGAACAAATTGTACAAAACATTATTTATGCATTAAATACGAGTAAAAATATAGACATGTGTATAAATTAAAAATAAAATCGATCCCCGTATTAATATATAAGTTAAAGTATAGACACATGTAAGAATTAAAAAAAATAGGTCCCGTTACTAATATATGAGTAAAAATACAGACACATGTATATATTAAAAAATAATAGGTTCCTGTATTAATATACGAGTTAAAATATAAACACATATATAAACATAAAAGATATTTGTATTAATATATGAATAAAACTATAAGTAAACTAATAAAAAAAGTAATAAAAAAAATTTGGTGTGACACTTGTCACACCATGCCCTATTCAAATCCGCCCCTGAATGGAAGACTCCTATTCTGAATTTATTTCCATGTAATTTGATATGAGTTATCTTGGCTAAAACAAGATAAATCTTGAAGATTTTTCAAGTAATTATGTTCTGTAAACATTATGTATTCAATTGGAATATAATTGTATAGACAAAAGCAAATGATTTCACTGGGTTAACAGTCCTAATGTAACCATGGCTATGGCCTGATTAATGTTTCACCTGTTAGTTTAGTGAGTGGCAGTAGCTGTCATATGATTAATTAATGTACATTAGTTTAAGTTTCAACACTGCTCTTATTTTAGCTAACGTTTCTGTATGTTATTAATTAACTTAATTGATGTCTTTTTCCAAAATTTAGTAGATGCTTAATGCAATAGAAATGTTAAGTTAAGGACATGTTCACGTGAGCATCTATGTAAGTGGGCCGTAGCTGACGGCACCATTTATTTGTTACATTGTTTGCTTACGGTACAATTTTAAAAGTTATTGATATCTTTTTTTGAAATAATATTGATTAGCTTTTGTTTTGTTTTGAGATAAGATAAGATTATTTATTTGGTGTTAAATCGTGTCATCAATTAATATTCAAACTATATTATCAATGCATTCTCTTTTATTAGTTAAAATTTGCACGAATCTTACTGATTTTATGTGAGAATTATATGATTTATTTTTTTTACATGACACCTGTTGATTGAATGAAATTCGTATAAATTTCAACCGATAAAAAGAACGTATGATGAGAGGAGTGTGAAAGAGAGTATTGCTAACACTTATCTTATATTATTAAATAACAACAACTAAAGTTATTTTATACATGGAGGTGATGCTGAGGCATCTTGTCTTGGGGCAGATTTTCAACTTGTGAATGAAGTGATGAAAATTTTCAAATCTTCATTAATATGCCCTTTGATCTTTCTAGTGTCCTTCCTCAATTTTTTCCTTGTATTTTTCACTCCTTCAAATGAAGATCATAGGATTCATTTCCACTCACCTTCTTTAGCACTTTTTAATATCAAAGGCAATCATGTAAGTGTGATCTCCCCACAAGGGAAATCACATCACGAGCTTCTCTTTACCTCTTCAAACAATGGCAGCTACAATAATATAAGTCAAACATGGATTAAGGTATTCACTATTCAACCTTGATAATCTTTGGAAAAGTGCTCTCATTGTTCTTACATGTCTTTTTATTTTTTGTTTTCAGTTTGGTCATAGGAGAAAGAATATGACTAGTTTGGAGAGGATTGAAGAAGGTTTATCACAAACACGAGCATTGATTCAGAAAGCAATTCGGTCCAAGAAGTATACAACCACCATGAAACAGAGTTTTGTTCCAAAAGGGTCCATTTACTTGAATCCACATGCTTTTCACCAGTTAAGTTTAATTATAACACTTCTGAATTTATTCTTTTATAATGTTAATGCACGATTTTTAAGATGAATATTTCTATGTCGAGCTGCTTGATATGTGTCATTGGGGCACATATTAGCATTTACCTACTTAAATTACTATAAAAATTAATTATGTTTCCCCTAAAGCAGGAGCCACATGGAGATGGTGAAGAGATTCAAGGTATGGGTATACAAGGAAGGAGAGCAACCATTGGTACATGATGGACCTGTAAACAACAAATATTCCATAGAAGGTCAATTCATTGATGAAATAGACACAAGTAACAAGAGTCCATTCAAGGCAACTCATCCTGAATTGGCCCATGTTTTCTTTCTTCCTTTCAGTGTGTCTAAGGTCATTCGCTATGTTTACAAGCCTAGAAGGTCTAGATCAGATTATGATCCTCATCGGTTACAGCTTTTAGTTGAGGACTATATTAGCATTGTTGCAAACAAGTATCCTTACTGGAACAGAAGTCAAGGTGCTGACCATTTTCTGCTTTCATGCCATGATTGGGTAGGTTCACAATTTCACCATTTTCTGAGCTTTCATTATCATTTTTGAATTTAAGTCTATGTGATGTGATAAGGACACGCTCTTTACTTGATGATTCAGGGACCAAGAGTTTCTTATGCTAATCCTAAACTCTTCAAGTACTTCATCAGGGCACTCTGCAATGCCAACACCTCAGAAGGATTTTTGCCTAACAGAGATGTGTCCATCCCTCAGTTGAATTTGCCTGTTGGAAAGCTTGGCCCACCTAATACGGACCAACACCCTAATAACCGAACAATCTTAGCTTTTTTTGCTGGTGGGGCACATGGTAAGATTAGAAAAAAGTTGCTCAAGAGTTGGAAGGACAAGGATGAAGAAGTTCAAGTTCATGAGTACCTTCCAAAAGGTCAAGATTATACAAAGTTGATGGGTCTAAGTAAGTTTTGTTTGTGCCCTAGTGGACATGAAGTGGCAAGTCCAAGAGTGGTGGAAGCAATTTATGCAGGTTGTGTGCCAGTGATAATTTGTGACAATTACTCTTTGCCTTTTAGTGATGTGCTTAATTGGAGTCAATTCTCCATGGAAATTGGAGTTGATAGAATACCAGAAATTAAGACTATTTTACAAAATATTACAGAAACAAAGTATAGGGTGTTGTATTCAAATGTTAGACGTGTACGAAAGCATTTTCAGATGAATAG
Protein sequence

>MS.gene58027.t1

MNNTTQVIKPHQFLTYNSAYRSFDHKANSSIKKIMTSLDRVEESLAEARASIREAILSRNYSTTSRRRDVFVPRGSIYRNPYAFHQSHMEMVKRLKIWVYKEGEQPIVHDGPLNNIYAIEGQFIDEIDNSIKSPFKAKHPSEAHIFFLPFSVANVVQYVYKPIMSKKDFNRDRLHRMVEDYVNVVADKYPYWNRSNGADHFLLSCHDWAPEISDANPNLFKNFTRVLCNANTSEGFQPKRDVSIPEVYLPVGKLGPPNLGQSPSNRTTLAFFSGGAHGDLRKLLLNHWKDKDAQVQVHEYLPKGQNYTQLMGLSKFCLCPSGYEVASPRIVEAINAGCVPVIISQNYSLPFNDVLNWSEFSVEIPVEKIVEIKTILQNISKDKYMKLHMNVMKVQKHFVMNRPAKPFDFGHRRKNMTSLERIEEGLSQTRALIQKAIRSKKYTTTMKQSFVPKGSIYLNPHAFHQSHMEMVKRFKVWVYKEGEQPLVHDGPVNNKYSIEGQFIDEIDTSNKSPFKATHPELAHVFFLPFSVSKVIRYVYKPRRSRSDYDPHRLQLLVEDYISIVANKYPYWNRSQGADHFLLSCHDWGPRVSYANPKLFKYFIRALCNANTSEGFLPNRDVSIPQLNLPVGKLGPPNTDQHPNNRTILAFFAGGAHGKIRKKLLKSWKDKDEEVQVHEYLPKGQDYTKLMGLSKFCLCPSGHEVASPRVVEAIYAGCVPTCTKAFSDE