Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69756.t1 | KEH35171.1 | 95.4 | 392 | 16 | 1 | 1 | 390 | 37 | 428 | 5.30E-223 | 783.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69756.t1 | Q9SSE8 | 66.6 | 365 | 121 | 1 | 27 | 390 | 87 | 451 | 1.8e-147 | 523.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69756.t1 | A0A072V0D6 | 95.4 | 392 | 16 | 1 | 1 | 390 | 37 | 428 | 3.8e-223 | 783.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049222 | MS.gene69756 | 0.803559 | 3.29E-49 | -1.69E-46 |
| MS.gene049232 | MS.gene69756 | 0.828937 | 6.81E-55 | -1.69E-46 |
| MS.gene049369 | MS.gene69756 | 0.81405 | 1.88E-51 | -1.69E-46 |
| MS.gene049396 | MS.gene69756 | 0.812933 | 3.30E-51 | -1.69E-46 |
| MS.gene050216 | MS.gene69756 | 0.807789 | 4.26E-50 | -1.69E-46 |
| MS.gene050323 | MS.gene69756 | 0.836223 | 1.06E-56 | -1.69E-46 |
| MS.gene050502 | MS.gene69756 | 0.856893 | 2.36E-62 | -1.69E-46 |
| MS.gene050697 | MS.gene69756 | 0.808869 | 2.51E-50 | -1.69E-46 |
| MS.gene050868 | MS.gene69756 | 0.832318 | 1.01E-55 | -1.69E-46 |
| MS.gene050871 | MS.gene69756 | 0.833817 | 4.29E-56 | -1.69E-46 |
| MS.gene051268 | MS.gene69756 | 0.800801 | 1.22E-48 | -1.69E-46 |
| MS.gene051509 | MS.gene69756 | 0.838974 | 2.09E-57 | -1.69E-46 |
| MS.gene051734 | MS.gene69756 | 0.801712 | 7.91E-49 | -1.69E-46 |
| MS.gene052966 | MS.gene69756 | 0.803107 | 4.08E-49 | -1.69E-46 |
| MS.gene053449 | MS.gene69756 | 0.82942 | 5.20E-55 | -1.69E-46 |
| MS.gene053574 | MS.gene69756 | 0.804436 | 2.16E-49 | -1.69E-46 |
| MS.gene053633 | MS.gene69756 | 0.808682 | 2.75E-50 | -1.69E-46 |
| MS.gene053912 | MS.gene69756 | 0.803666 | 3.13E-49 | -1.69E-46 |
| MS.gene054595 | MS.gene69756 | 0.812884 | 3.39E-51 | -1.69E-46 |
| MS.gene05494 | MS.gene69756 | 0.805482 | 1.31E-49 | -1.69E-46 |
| MS.gene055750 | MS.gene69756 | 0.814993 | 1.16E-51 | -1.69E-46 |
| MS.gene055751 | MS.gene69756 | 0.801095 | 1.06E-48 | -1.69E-46 |
| MS.gene05589 | MS.gene69756 | 0.800889 | 1.17E-48 | -1.69E-46 |
| MS.gene056387 | MS.gene69756 | 0.840156 | 1.03E-57 | -1.69E-46 |
| MS.gene056422 | MS.gene69756 | 0.826585 | 2.50E-54 | -1.69E-46 |
| MS.gene056487 | MS.gene69756 | 0.82776 | 1.31E-54 | -1.69E-46 |
| MS.gene056504 | MS.gene69756 | 0.833702 | 4.58E-56 | -1.69E-46 |
| MS.gene05664 | MS.gene69756 | 0.813492 | 2.49E-51 | -1.69E-46 |
| MS.gene056657 | MS.gene69756 | 0.803285 | 3.75E-49 | -1.69E-46 |
| MS.gene05666 | MS.gene69756 | 0.832245 | 1.06E-55 | -1.69E-46 |
| MS.gene057086 | MS.gene69756 | 0.855889 | 4.66E-62 | -1.69E-46 |
| MS.gene05753 | MS.gene69756 | 0.81069 | 1.02E-50 | -1.69E-46 |
| MS.gene057734 | MS.gene69756 | 0.810251 | 1.27E-50 | -1.69E-46 |
| MS.gene057926 | MS.gene69756 | 0.831013 | 2.12E-55 | -1.69E-46 |
| MS.gene058459 | MS.gene69756 | 0.820691 | 6.00E-53 | -1.69E-46 |
| MS.gene05913 | MS.gene69756 | 0.825373 | 4.86E-54 | -1.69E-46 |
| MS.gene059305 | MS.gene69756 | 0.82263 | 2.14E-53 | -1.69E-46 |
| MS.gene059367 | MS.gene69756 | 0.83686 | 7.31E-57 | -1.69E-46 |
| MS.gene059674 | MS.gene69756 | 0.802528 | 5.38E-49 | -1.69E-46 |
| MS.gene059680 | MS.gene69756 | 0.802508 | 5.43E-49 | -1.69E-46 |
| MS.gene059865 | MS.gene69756 | 0.843237 | 1.59E-58 | -1.69E-46 |
| MS.gene06000 | MS.gene69756 | 0.809262 | 2.06E-50 | -1.69E-46 |
| MS.gene060482 | MS.gene69756 | 0.829588 | 4.73E-55 | -1.69E-46 |
| MS.gene060778 | MS.gene69756 | 0.800946 | 1.14E-48 | -1.69E-46 |
| MS.gene06097 | MS.gene69756 | 0.832869 | 7.39E-56 | -1.69E-46 |
| MS.gene060982 | MS.gene69756 | 0.82465 | 7.20E-54 | -1.69E-46 |
| MS.gene061041 | MS.gene69756 | 0.803983 | 2.69E-49 | -1.69E-46 |
| MS.gene061134 | MS.gene69756 | 0.802485 | 5.49E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene69756 | MS.gene027811 | PPI |
| MS.gene69756 | MS.gene036708 | PPI |
| MS.gene69756 | MS.gene068605 | PPI |
| MS.gene69756 | MS.gene069139 | PPI |
| MS.gene69756 | MS.gene58027 | PPI |
| MS.gene69756 | MS.gene070886 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69756.t1 | MTR_3g080690 | 95.641 | 390 | 17 | 0 | 1 | 390 | 37 | 426 | 0.0 | 787 |
| MS.gene69756.t1 | MTR_3g081240 | 95.408 | 392 | 16 | 1 | 1 | 390 | 37 | 428 | 0.0 | 786 |
| MS.gene69756.t1 | MTR_3g097310 | 62.842 | 366 | 134 | 1 | 25 | 390 | 110 | 473 | 3.52e-165 | 474 |
| MS.gene69756.t1 | MTR_1g061760 | 55.814 | 387 | 164 | 2 | 25 | 410 | 106 | 486 | 1.35e-154 | 447 |
| MS.gene69756.t1 | MTR_7g103260 | 54.620 | 368 | 157 | 2 | 25 | 390 | 20 | 379 | 1.41e-148 | 429 |
| MS.gene69756.t1 | MTR_7g103270 | 52.956 | 389 | 173 | 2 | 24 | 410 | 20 | 400 | 6.70e-147 | 424 |
| MS.gene69756.t1 | MTR_3g106690 | 57.764 | 322 | 133 | 2 | 72 | 390 | 52 | 373 | 4.33e-133 | 389 |
| MS.gene69756.t1 | MTR_4g115540 | 48.477 | 394 | 195 | 3 | 24 | 411 | 236 | 627 | 6.81e-128 | 384 |
| MS.gene69756.t1 | MTR_4g115460 | 48.806 | 377 | 183 | 6 | 20 | 390 | 72 | 444 | 7.91e-122 | 363 |
| MS.gene69756.t1 | MTR_4g115530 | 47.989 | 373 | 185 | 4 | 24 | 390 | 3 | 372 | 1.08e-118 | 352 |
| MS.gene69756.t1 | MTR_4g115530 | 49.057 | 318 | 156 | 2 | 79 | 390 | 1 | 318 | 4.54e-104 | 313 |
| MS.gene69756.t1 | MTR_1g006600 | 44.974 | 378 | 190 | 5 | 17 | 390 | 206 | 569 | 1.04e-100 | 313 |
| MS.gene69756.t1 | MTR_7g103150 | 43.817 | 372 | 192 | 5 | 23 | 390 | 109 | 467 | 1.01e-98 | 304 |
| MS.gene69756.t1 | MTR_4g115540 | 50.166 | 301 | 142 | 3 | 24 | 318 | 236 | 534 | 2.73e-98 | 305 |
| MS.gene69756.t1 | MTR_4g100730 | 45.646 | 333 | 174 | 4 | 65 | 390 | 186 | 518 | 8.70e-98 | 303 |
| MS.gene69756.t1 | MTR_8g102840 | 41.953 | 379 | 201 | 6 | 17 | 390 | 228 | 592 | 2.33e-97 | 305 |
| MS.gene69756.t1 | MTR_1g090733 | 42.975 | 363 | 188 | 7 | 34 | 390 | 181 | 530 | 2.51e-96 | 300 |
| MS.gene69756.t1 | MTR_3g110198 | 45.455 | 330 | 173 | 3 | 65 | 390 | 250 | 576 | 1.73e-95 | 299 |
| MS.gene69756.t1 | MTR_3g110200 | 41.873 | 363 | 194 | 5 | 32 | 390 | 224 | 573 | 2.65e-92 | 291 |
| MS.gene69756.t1 | MTR_8g102840 | 39.286 | 308 | 168 | 6 | 17 | 319 | 228 | 521 | 1.77e-67 | 224 |
| MS.gene69756.t1 | MTR_5g031480 | 35.088 | 342 | 206 | 6 | 63 | 398 | 74 | 405 | 1.09e-64 | 214 |
| MS.gene69756.t1 | MTR_5g049790 | 35.103 | 339 | 194 | 7 | 63 | 398 | 110 | 425 | 4.60e-60 | 202 |
| MS.gene69756.t1 | MTR_7g085840 | 35.455 | 330 | 186 | 10 | 79 | 396 | 1 | 315 | 1.81e-49 | 171 |
| MS.gene69756.t1 | MTR_5g031480 | 33.708 | 267 | 161 | 6 | 63 | 323 | 74 | 330 | 2.17e-41 | 150 |
| MS.gene69756.t1 | MTR_5g031480 | 33.835 | 266 | 160 | 6 | 63 | 322 | 74 | 329 | 5.74e-41 | 149 |
| MS.gene69756.t1 | MTR_5g049790 | 35.211 | 213 | 125 | 5 | 63 | 272 | 127 | 329 | 4.61e-31 | 122 |
| MS.gene69756.t1 | MTR_5g049790 | 35.211 | 213 | 125 | 5 | 63 | 272 | 110 | 312 | 5.39e-31 | 122 |
| MS.gene69756.t1 | MTR_8g096140 | 28.571 | 280 | 174 | 7 | 110 | 370 | 81 | 353 | 2.44e-25 | 107 |
| MS.gene69756.t1 | MTR_8g096160 | 25.000 | 312 | 210 | 6 | 110 | 402 | 81 | 387 | 2.79e-25 | 107 |
| MS.gene69756.t1 | MTR_2g084245 | 28.221 | 326 | 191 | 13 | 79 | 373 | 85 | 398 | 4.45e-23 | 101 |
| MS.gene69756.t1 | MTR_4g057500 | 27.914 | 326 | 188 | 13 | 81 | 373 | 105 | 416 | 1.51e-22 | 100 |
| MS.gene69756.t1 | MTR_3g037720 | 26.790 | 377 | 215 | 17 | 80 | 406 | 112 | 477 | 6.05e-21 | 95.5 |
| MS.gene69756.t1 | MTR_8g080490 | 25.828 | 302 | 205 | 8 | 105 | 393 | 97 | 392 | 4.42e-18 | 86.3 |
| MS.gene69756.t1 | MTR_6g027310 | 26.712 | 292 | 191 | 10 | 113 | 390 | 174 | 456 | 5.50e-18 | 86.7 |
| MS.gene69756.t1 | MTR_4g084200 | 24.915 | 293 | 190 | 10 | 120 | 392 | 158 | 440 | 2.84e-17 | 84.3 |
| MS.gene69756.t1 | MTR_3g085480 | 25.436 | 287 | 191 | 10 | 122 | 393 | 116 | 394 | 1.14e-15 | 79.0 |
| MS.gene69756.t1 | MTR_4g084200 | 24.382 | 283 | 184 | 10 | 120 | 382 | 158 | 430 | 2.19e-14 | 75.1 |
| MS.gene69756.t1 | MTR_4g077920 | 25.589 | 297 | 191 | 10 | 113 | 385 | 98 | 388 | 3.66e-14 | 74.7 |
| MS.gene69756.t1 | MTR_7g087100 | 25.347 | 288 | 188 | 10 | 122 | 393 | 188 | 464 | 4.72e-14 | 74.3 |
| MS.gene69756.t1 | MTR_4g084200 | 24.638 | 276 | 178 | 10 | 120 | 375 | 158 | 423 | 8.06e-14 | 73.6 |
| MS.gene69756.t1 | MTR_5g081290 | 30.464 | 151 | 87 | 3 | 79 | 229 | 1 | 133 | 1.85e-12 | 67.8 |
| MS.gene69756.t1 | MTR_1g061790 | 39.669 | 121 | 57 | 4 | 6 | 123 | 87 | 194 | 3.15e-12 | 65.9 |
| MS.gene69756.t1 | MTR_1g097090 | 25.597 | 293 | 181 | 9 | 122 | 384 | 139 | 424 | 3.45e-12 | 68.6 |
| MS.gene69756.t1 | MTR_1g097090 | 25.597 | 293 | 181 | 9 | 122 | 384 | 139 | 424 | 4.36e-12 | 68.2 |
| MS.gene69756.t1 | MTR_4g077920 | 23.675 | 283 | 188 | 10 | 119 | 385 | 176 | 446 | 1.43e-11 | 66.6 |
| MS.gene69756.t1 | MTR_4g077920 | 25.652 | 230 | 150 | 8 | 174 | 387 | 224 | 448 | 1.50e-11 | 66.6 |
| MS.gene69756.t1 | MTR_1g029350 | 27.612 | 268 | 165 | 12 | 114 | 364 | 118 | 373 | 2.88e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69756.t1 | AT3G07620 | 66.575 | 365 | 121 | 1 | 27 | 390 | 76 | 440 | 0.0 | 521 |
| MS.gene69756.t1 | AT5G03795 | 56.676 | 367 | 153 | 1 | 24 | 390 | 137 | 497 | 3.78e-144 | 422 |
| MS.gene69756.t1 | AT5G25310 | 50.000 | 388 | 182 | 5 | 23 | 406 | 98 | 477 | 1.99e-133 | 393 |
| MS.gene69756.t1 | AT5G11130 | 49.474 | 380 | 176 | 6 | 27 | 396 | 91 | 464 | 4.58e-127 | 377 |
| MS.gene69756.t1 | AT5G20260 | 47.804 | 387 | 194 | 6 | 23 | 406 | 82 | 463 | 3.26e-118 | 353 |
| MS.gene69756.t1 | AT5G11130 | 50.602 | 332 | 158 | 3 | 79 | 406 | 1 | 330 | 9.11e-118 | 348 |
| MS.gene69756.t1 | AT3G42180 | 50.147 | 341 | 161 | 2 | 59 | 390 | 110 | 450 | 5.40e-115 | 345 |
| MS.gene69756.t1 | AT5G33290 | 47.922 | 361 | 177 | 3 | 55 | 406 | 138 | 496 | 4.53e-113 | 342 |
| MS.gene69756.t1 | AT4G16745 | 45.257 | 369 | 185 | 6 | 29 | 390 | 156 | 514 | 1.41e-106 | 326 |
| MS.gene69756.t1 | AT5G20260 | 48.512 | 336 | 170 | 3 | 74 | 406 | 23 | 358 | 4.50e-106 | 319 |
| MS.gene69756.t1 | AT3G42180 | 49.533 | 321 | 153 | 2 | 79 | 390 | 1 | 321 | 5.64e-106 | 318 |
| MS.gene69756.t1 | AT5G20260 | 48.640 | 331 | 167 | 3 | 79 | 406 | 1 | 331 | 1.15e-105 | 317 |
| MS.gene69756.t1 | AT4G16745 | 44.959 | 367 | 185 | 6 | 29 | 388 | 156 | 512 | 1.83e-104 | 322 |
| MS.gene69756.t1 | AT5G19670 | 43.807 | 331 | 178 | 3 | 65 | 390 | 263 | 590 | 5.46e-97 | 303 |
| MS.gene69756.t1 | AT5G19670 | 43.807 | 331 | 178 | 3 | 65 | 390 | 263 | 590 | 5.46e-97 | 303 |
| MS.gene69756.t1 | AT4G32790 | 43.750 | 368 | 189 | 6 | 28 | 390 | 222 | 576 | 7.77e-97 | 303 |
| MS.gene69756.t1 | AT4G32790 | 43.750 | 368 | 189 | 6 | 28 | 390 | 222 | 576 | 7.77e-97 | 303 |
| MS.gene69756.t1 | AT4G32790 | 43.750 | 368 | 189 | 6 | 28 | 390 | 222 | 576 | 7.77e-97 | 303 |
| MS.gene69756.t1 | AT5G37000 | 38.000 | 400 | 226 | 7 | 10 | 391 | 140 | 535 | 2.93e-90 | 285 |
| MS.gene69756.t1 | AT5G25820 | 41.237 | 388 | 206 | 9 | 11 | 390 | 262 | 635 | 3.42e-89 | 285 |
| MS.gene69756.t1 | AT5G11610 | 39.295 | 369 | 205 | 8 | 27 | 390 | 174 | 528 | 7.24e-87 | 275 |
| MS.gene69756.t1 | AT4G38040 | 34.412 | 340 | 207 | 6 | 63 | 396 | 84 | 413 | 4.43e-60 | 202 |
| MS.gene69756.t1 | AT5G11610 | 37.024 | 289 | 164 | 7 | 27 | 311 | 174 | 448 | 4.95e-59 | 200 |
| MS.gene69756.t1 | AT4G38040 | 34.161 | 322 | 196 | 6 | 63 | 378 | 84 | 395 | 3.60e-54 | 186 |
| MS.gene69756.t1 | AT5G11610 | 36.313 | 179 | 102 | 3 | 27 | 203 | 174 | 342 | 6.65e-31 | 122 |
| MS.gene69756.t1 | AT1G27440 | 26.978 | 278 | 181 | 6 | 110 | 370 | 77 | 349 | 7.71e-26 | 109 |
| MS.gene69756.t1 | AT5G61840 | 25.962 | 312 | 199 | 8 | 83 | 370 | 49 | 352 | 2.33e-24 | 105 |
| MS.gene69756.t1 | AT2G28110 | 26.316 | 304 | 196 | 9 | 122 | 402 | 138 | 436 | 3.84e-21 | 95.9 |
| MS.gene69756.t1 | AT1G74680 | 28.028 | 289 | 190 | 8 | 117 | 393 | 144 | 426 | 3.30e-20 | 93.2 |
| MS.gene69756.t1 | AT1G67410 | 27.055 | 292 | 195 | 9 | 116 | 393 | 113 | 400 | 3.83e-20 | 92.8 |
| MS.gene69756.t1 | AT2G35100 | 24.912 | 285 | 181 | 10 | 120 | 385 | 125 | 395 | 3.88e-18 | 86.7 |
| MS.gene69756.t1 | AT3G03650 | 27.500 | 320 | 204 | 11 | 117 | 420 | 188 | 495 | 4.56e-18 | 87.0 |
| MS.gene69756.t1 | AT5G22940 | 24.671 | 304 | 191 | 10 | 114 | 390 | 146 | 438 | 3.60e-17 | 84.0 |
| MS.gene69756.t1 | AT3G45400 | 26.923 | 286 | 184 | 8 | 122 | 392 | 154 | 429 | 3.99e-17 | 84.0 |
| MS.gene69756.t1 | AT5G22940 | 24.671 | 304 | 191 | 10 | 114 | 390 | 175 | 467 | 5.30e-17 | 83.6 |
| MS.gene69756.t1 | AT5G16890 | 23.693 | 287 | 189 | 10 | 118 | 387 | 181 | 454 | 7.14e-14 | 73.9 |
| MS.gene69756.t1 | AT5G44930 | 27.632 | 228 | 131 | 11 | 173 | 381 | 175 | 387 | 1.79e-12 | 69.3 |
| MS.gene69756.t1 | AT5G44930 | 27.632 | 228 | 131 | 11 | 173 | 381 | 175 | 387 | 1.79e-12 | 69.3 |
| MS.gene69756.t1 | AT1G34270 | 29.832 | 238 | 133 | 11 | 174 | 384 | 195 | 425 | 3.38e-11 | 65.5 |
Find 83 sgRNAs with CRISPR-Local
Find 184 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTGCATTGATCTTCTTAT+AGG | 0.128865 | 3.4:-77216956 | None:intergenic |
| GGGAATATTTATCAACTTAT+TGG | 0.144366 | 3.4:+77218325 | MS.gene69756:CDS |
| CCTGTTACCAAATTGATTTC+AGG | 0.158016 | 3.4:-77218768 | None:intergenic |
| AACATGGAACAGAACAATTT+TGG | 0.172114 | 3.4:+77218821 | MS.gene69756:CDS |
| TATCACACAAATATGCTTAT+TGG | 0.232545 | 3.4:+77218501 | MS.gene69756:CDS |
| ATCATTTCCTGAAATCAATT+TGG | 0.239355 | 3.4:+77218761 | MS.gene69756:CDS |
| TAAATTGCCTCAACAATTCT+TGG | 0.244588 | 3.4:-77219017 | None:intergenic |
| CCTGAAATCAATTTGGTAAC+AGG | 0.246714 | 3.4:+77218768 | MS.gene69756:CDS |
| GGAAATGATGCATCTTTCTT+TGG | 0.250368 | 3.4:-77218747 | None:intergenic |
| TATTCGTGACAAAGCTGTTT+TGG | 0.263997 | 3.4:+77218448 | MS.gene69756:CDS |
| ACAGCTTTGTCACGAATAAC+TGG | 0.273001 | 3.4:-77218443 | None:intergenic |
| TATTGTTGTGATATTATAAT+AGG | 0.275605 | 3.4:-77219053 | None:intergenic |
| TACTCATCTTCATTGTTTCA+TGG | 0.291583 | 3.4:-77218956 | None:intergenic |
| AGGATCATAACAACACTAAA+TGG | 0.293875 | 3.4:-77218404 | None:intergenic |
| TACAATGGAGAATTGAATTT+AGG | 0.295142 | 3.4:+77216923 | MS.gene69756:CDS |
| TCATGCTTTCTTGTCATGAT+TGG | 0.298264 | 3.4:+77218549 | MS.gene69756:CDS |
| ATATAGGAGTTACCACTTAA+TGG | 0.323102 | 3.4:+77218217 | MS.gene69756:intron |
| AATGCAAGGAGATAGAAATT+TGG | 0.324834 | 3.4:+77216970 | MS.gene69756:CDS |
| CATGCTTTCTTGTCATGATT+GGG | 0.337722 | 3.4:+77218550 | MS.gene69756:CDS |
| AACAAAATTTCCTTAAGCTT+GGG | 0.346625 | 3.4:-77219143 | None:intergenic |
| TAAATTCAATTCTCCATTGT+AGG | 0.358796 | 3.4:-77216921 | None:intergenic |
| TAGTGAAATTCCCAAGCTTA+AGG | 0.365820 | 3.4:+77219133 | MS.gene69756:CDS |
| TGAAATACATCATATCTCTT+AGG | 0.369121 | 3.4:-77219245 | None:intergenic |
| CAATCAAGAACATCACTAAA+AGG | 0.369286 | 3.4:-77219083 | None:intergenic |
| CAACAAAATTTCCTTAAGCT+TGG | 0.385217 | 3.4:-77219144 | None:intergenic |
| AAGTAGACATGAGCTTCATT+TGG | 0.398848 | 3.4:-77218377 | None:intergenic |
| TTCACATACCATGTTGCCCT+TGG | 0.411752 | 3.4:-77218663 | None:intergenic |
| AGAAATTTGGAGAAGGTTGA+AGG | 0.417058 | 3.4:+77216983 | MS.gene69756:CDS |
| TAAATAGCTTCTCCATTAAG+TGG | 0.424602 | 3.4:-77218229 | None:intergenic |
| GCTTATTGGAATAGAAGTTA+TGG | 0.446862 | 3.4:+77218515 | MS.gene69756:CDS |
| TATCTTTGTTCTTCCAATGT+TGG | 0.453246 | 3.4:-77218890 | None:intergenic |
| TAAAATCTTTGTGTATGAAG+AGG | 0.453499 | 3.4:+77218250 | MS.gene69756:CDS |
| AAAATCTTTGTGTATGAAGA+GGG | 0.454200 | 3.4:+77218251 | MS.gene69756:CDS |
| CATGACAAGAAAGCATGAAA+TGG | 0.462671 | 3.4:-77218544 | None:intergenic |
| CTTGCCACTTCCCACCCACT+TGG | 0.464582 | 3.4:-77218993 | None:intergenic |
| TTGGTAACAGGAGAAACAAC+AGG | 0.474598 | 3.4:+77218780 | MS.gene69756:CDS |
| TTGCAAGAATATATATTCAA+TGG | 0.476651 | 3.4:+77218301 | MS.gene69756:CDS |
| AAATCTAGTCGTGCAAATGA+TGG | 0.480169 | 3.4:-77219674 | None:intergenic |
| AAGAGGCAGTACGGTGTCAT+TGG | 0.482673 | 3.4:-77217053 | None:intergenic |
| TAGTCGTGCAAATGATGGAC+AGG | 0.483809 | 3.4:-77219669 | None:intergenic |
| GGAGAAACAACAGGTTTACT+TGG | 0.502236 | 3.4:+77218789 | MS.gene69756:CDS |
| AAAATTGTTCTGTTCCATGT+TGG | 0.510175 | 3.4:-77218819 | None:intergenic |
| TTGTCCAAGTGGGTGGGAAG+TGG | 0.510845 | 3.4:+77218989 | MS.gene69756:CDS |
| ATTGTATTTGTCCAAGTGGG+TGG | 0.518103 | 3.4:+77218982 | MS.gene69756:CDS |
| GAGAATAAGGTGATAAGCAT+CGG | 0.528579 | 3.4:-77219725 | None:intergenic |
| ATAAGCATCGGATGTGTGAA+AGG | 0.534593 | 3.4:-77219713 | None:intergenic |
| GAAATATATAAGATTGCAAG+AGG | 0.540677 | 3.4:+77219181 | MS.gene69756:CDS |
| CTGGGTGAAAGAGATGTTCA+AGG | 0.557117 | 3.4:-77218424 | None:intergenic |
| AGGAGATAGAAATTTGGAGA+AGG | 0.557354 | 3.4:+77216976 | MS.gene69756:CDS |
| AATACATCATATCTCTTAGG+AGG | 0.557887 | 3.4:-77219242 | None:intergenic |
| TTCCAATGTTGGAAAAGCAA+TGG | 0.557955 | 3.4:-77218879 | None:intergenic |
| GAAGGAAATGGATGCTGCAA+TGG | 0.560884 | 3.4:+77219506 | MS.gene69756:intron |
| TACTTGGTGGCTATCCAACA+TGG | 0.562509 | 3.4:+77218805 | MS.gene69756:CDS |
| GAAACAACAGGTTTACTTGG+TGG | 0.562533 | 3.4:+77218792 | MS.gene69756:CDS |
| ATTGAATATATATTCTTGCA+AGG | 0.562749 | 3.4:-77218299 | None:intergenic |
| CAAGAATATATATTCAATGG+AGG | 0.575833 | 3.4:+77218304 | MS.gene69756:CDS |
| AGAATTCTCAAGAGGCAGTA+CGG | 0.580764 | 3.4:-77217062 | None:intergenic |
| GGTGTCATTGGTTCTCAACA+AGG | 0.582461 | 3.4:-77217041 | None:intergenic |
| GATTGTAAACAATCAACGCA+TGG | 0.587309 | 3.4:-77219762 | None:intergenic |
| TTGTATTTGTCCAAGTGGGT+GGG | 0.588230 | 3.4:+77218983 | MS.gene69756:CDS |
| AATATTGTATTTGTCCAAGT+GGG | 0.593695 | 3.4:+77218979 | MS.gene69756:CDS |
| ACTTTGCAATGCAAATATCT+CGG | 0.598690 | 3.4:+77218713 | MS.gene69756:CDS |
| ATCTTACCTATGAAAAGCAA+AGG | 0.600165 | 3.4:-77217122 | None:intergenic |
| ATTTGCACGACTAGATTTAG+CGG | 0.600624 | 3.4:+77219679 | MS.gene69756:CDS |
| TTCTTTGCAGGACAAATGCA+TGG | 0.604295 | 3.4:+77218846 | MS.gene69756:CDS |
| AAGAATATATATTCAATGGA+GGG | 0.605925 | 3.4:+77218305 | MS.gene69756:CDS |
| GGCAAGTCCAAGAATTGTTG+AGG | 0.611209 | 3.4:+77219010 | MS.gene69756:CDS |
| TTTCTGTAGATGTCTCCTTG+TGG | 0.615421 | 3.4:-77217097 | None:intergenic |
| AAATATTGTATTTGTCCAAG+TGG | 0.615905 | 3.4:+77218978 | MS.gene69756:CDS |
| TAATCATGAGAATTCTCAAG+AGG | 0.616725 | 3.4:-77217070 | None:intergenic |
| CAATCAACGCATGGTCTCAG+AGG | 0.617682 | 3.4:-77219753 | None:intergenic |
| CAGCTTTGTCACGAATAACT+GGG | 0.619899 | 3.4:-77218442 | None:intergenic |
| TATAAGTCAATGGCCTACAA+TGG | 0.620465 | 3.4:+77216908 | None:intergenic |
| TATAGGGACCAAGGGCAACA+TGG | 0.622985 | 3.4:+77218655 | MS.gene69756:intron |
| TAAGCATCGGATGTGTGAAA+GGG | 0.626641 | 3.4:-77219712 | None:intergenic |
| AAGGGCAACATGGTATGTGA+AGG | 0.631000 | 3.4:+77218665 | MS.gene69756:CDS |
| GGACAGGGGATAGCATCGTA+CGG | 0.635910 | 3.4:-77219653 | None:intergenic |
| CCTATAAGAAGATCAATGCA+AGG | 0.636919 | 3.4:+77216956 | MS.gene69756:CDS |
| AGTCGTGCAAATGATGGACA+GGG | 0.640098 | 3.4:-77219668 | None:intergenic |
| TCTCATGATTATGTTCCACA+AGG | 0.658849 | 3.4:+77217082 | MS.gene69756:CDS |
| AAATATATAAGATTGCAAGA+GGG | 0.689156 | 3.4:+77219182 | MS.gene69756:CDS |
| GTCGTGCAAATGATGGACAG+GGG | 0.711315 | 3.4:-77219667 | None:intergenic |
| TGCACGACTAGATTTAGCGG+CGG | 0.721775 | 3.4:+77219682 | MS.gene69756:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATTGTTCATAAAATA+AGG | - | chr3.4:77217634-77217653 | None:intergenic | 10.0% |
| !! | AAAAATTGTTCATAAAATAA+GGG | - | chr3.4:77217633-77217652 | None:intergenic | 10.0% |
| !! | TAATATATGAAATTCTTAAA+AGG | - | chr3.4:77218061-77218080 | None:intergenic | 10.0% |
| !! | TTAAGAATTTCATATATTAA+AGG | + | chr3.4:77218062-77218081 | MS.gene69756:intron | 10.0% |
| !!! | ATTTTTATATTTCATGAAAA+TGG | + | chr3.4:77218625-77218644 | MS.gene69756:intron | 10.0% |
| !!! | TATTTTATGAACAATTTTTT+GGG | + | chr3.4:77217634-77217653 | MS.gene69756:intron | 10.0% |
| !!! | TTATTTTATGAACAATTTTT+TGG | + | chr3.4:77217633-77217652 | MS.gene69756:intron | 10.0% |
| !! | ATATGATTATTCATTCTATA+TGG | + | chr3.4:77219267-77219286 | MS.gene69756:intron | 15.0% |
| !! | TATTGTTGTGATATTATAAT+AGG | - | chr3.4:77219056-77219075 | None:intergenic | 15.0% |
| !!! | ATTCATTTATTTGTTAATGT+GGG | + | chr3.4:77219348-77219367 | MS.gene69756:intron | 15.0% |
| !!! | TATTCATTTATTTGTTAATG+TGG | + | chr3.4:77219347-77219366 | MS.gene69756:intron | 15.0% |
| !!! | TTTTTACATAATGATGATAT+AGG | + | chr3.4:77218201-77218220 | MS.gene69756:intron | 15.0% |
| !! | AAATATATAAGATTGCAAGA+GGG | + | chr3.4:77219182-77219201 | MS.gene69756:CDS | 20.0% |
| !! | AAGAATATATATTCAATGGA+GGG | + | chr3.4:77218305-77218324 | MS.gene69756:CDS | 20.0% |
| !! | AATTTCATATATTAAAGGTG+AGG | + | chr3.4:77218067-77218086 | MS.gene69756:intron | 20.0% |
| !! | ATTGAATATATATTCTTGCA+AGG | - | chr3.4:77218302-77218321 | None:intergenic | 20.0% |
| !! | ATTTCATATATTAAAGGTGA+GGG | + | chr3.4:77218068-77218087 | MS.gene69756:intron | 20.0% |
| !! | TGAAAATTGTATGTACATAT+TGG | + | chr3.4:77218106-77218125 | MS.gene69756:intron | 20.0% |
| !! | TTAAAAATAGTTTCTTAGCA+TGG | + | chr3.4:77217586-77217605 | MS.gene69756:intron | 20.0% |
| !! | TTGCAAGAATATATATTCAA+TGG | + | chr3.4:77218301-77218320 | MS.gene69756:CDS | 20.0% |
| ! | AAAATCTTTGTGTATGAAGA+GGG | + | chr3.4:77218251-77218270 | MS.gene69756:CDS | 25.0% |
| ! | AAATATTGTATTTGTCCAAG+TGG | + | chr3.4:77218978-77218997 | MS.gene69756:CDS | 25.0% |
| ! | AACAAAATTTCCTTAAGCTT+GGG | - | chr3.4:77219146-77219165 | None:intergenic | 25.0% |
| ! | AATATTGTATTTGTCCAAGT+GGG | + | chr3.4:77218979-77218998 | MS.gene69756:CDS | 25.0% |
| ! | ACAAATGTGAGAAAGATAAA+TGG | + | chr3.4:77219386-77219405 | MS.gene69756:intron | 25.0% |
| ! | ATCATTTCCTGAAATCAATT+TGG | + | chr3.4:77218761-77218780 | MS.gene69756:CDS | 25.0% |
| ! | CAAGAATATATATTCAATGG+AGG | + | chr3.4:77218304-77218323 | MS.gene69756:CDS | 25.0% |
| ! | CATACTCACACTATAATTAA+CGG | - | chr3.4:77218597-77218616 | None:intergenic | 25.0% |
| ! | GAAATATATAAGATTGCAAG+AGG | + | chr3.4:77219181-77219200 | MS.gene69756:CDS | 25.0% |
| ! | GGGAATATTTATCAACTTAT+TGG | + | chr3.4:77218325-77218344 | MS.gene69756:CDS | 25.0% |
| ! | TAAAATCTTTGTGTATGAAG+AGG | + | chr3.4:77218250-77218269 | MS.gene69756:CDS | 25.0% |
| ! | TAAATTCAATTCTCCATTGT+AGG | - | chr3.4:77216924-77216943 | None:intergenic | 25.0% |
| ! | TACAATGGAGAATTGAATTT+AGG | + | chr3.4:77216923-77216942 | MS.gene69756:CDS | 25.0% |
| ! | TATCACACAAATATGCTTAT+TGG | + | chr3.4:77218501-77218520 | MS.gene69756:CDS | 25.0% |
| ! | TGAAATACATCATATCTCTT+AGG | - | chr3.4:77219248-77219267 | None:intergenic | 25.0% |
| ! | TGAGAACACAAATGTTAAAT+GGG | - | chr3.4:77217667-77217686 | None:intergenic | 25.0% |
| ! | TTATTCATTCTATATGGCTT+AGG | + | chr3.4:77219273-77219292 | MS.gene69756:intron | 25.0% |
| !! | AAAACTTTGCTATACTTAAG+TGG | - | chr3.4:77217212-77217231 | None:intergenic | 25.0% |
| !! | AAGCTTAAGGAAATTTTGTT+GGG | + | chr3.4:77219146-77219165 | MS.gene69756:CDS | 25.0% |
| !! | AGGATTTTATTACTCATCAA+AGG | + | chr3.4:77217170-77217189 | MS.gene69756:intron | 25.0% |
| !! | TCATGGTATGAAATATTTTC+TGG | - | chr3.4:77218942-77218961 | None:intergenic | 25.0% |
| !! | TTCGTTAAGAGTTGATTATA+TGG | - | chr3.4:77219478-77219497 | None:intergenic | 25.0% |
| !! | TTTTAGTGATGTTCTTGATT+GGG | + | chr3.4:77219085-77219104 | MS.gene69756:CDS | 25.0% |
| !!! | ATGAAAATGGTTTTGTGTAT+AGG | + | chr3.4:77218638-77218657 | MS.gene69756:intron | 25.0% |
| !!! | CTCTTAATTTTGATTCATTC+TGG | + | chr3.4:77219619-77219638 | MS.gene69756:intron | 25.0% |
| !!! | TGAAAATGGTTTTGTGTATA+GGG | + | chr3.4:77218639-77218658 | MS.gene69756:intron | 25.0% |
| AAAATTGTTCTGTTCCATGT+TGG | - | chr3.4:77218822-77218841 | None:intergenic | 30.0% | |
| AATACATCATATCTCTTAGG+AGG | - | chr3.4:77219245-77219264 | None:intergenic | 30.0% | |
| AATAGAGCATGACATTTAAG+AGG | - | chr3.4:77218162-77218181 | None:intergenic | 30.0% | |
| AATGCAAGGAGATAGAAATT+TGG | + | chr3.4:77216970-77216989 | MS.gene69756:CDS | 30.0% | |
| ACTAACAAAGTCTACATTCA+GGG | + | chr3.4:77217926-77217945 | MS.gene69756:intron | 30.0% | |
| ACTTTGCAATGCAAATATCT+CGG | + | chr3.4:77218713-77218732 | MS.gene69756:CDS | 30.0% | |
| AGGATCATAACAACACTAAA+TGG | - | chr3.4:77218407-77218426 | None:intergenic | 30.0% | |
| ATATAGGAGTTACCACTTAA+TGG | + | chr3.4:77218217-77218236 | MS.gene69756:intron | 30.0% | |
| ATCTTACCTATGAAAAGCAA+AGG | - | chr3.4:77217125-77217144 | None:intergenic | 30.0% | |
| CAACAAAATTTCCTTAAGCT+TGG | - | chr3.4:77219147-77219166 | None:intergenic | 30.0% | |
| CAATCAAGAACATCACTAAA+AGG | - | chr3.4:77219086-77219105 | None:intergenic | 30.0% | |
| CAGATTGTTAGATGTGTATA+TGG | + | chr3.4:77217432-77217451 | MS.gene69756:intron | 30.0% | |
| GAACTATATCATGAGAGATA+AGG | + | chr3.4:77217150-77217169 | MS.gene69756:intron | 30.0% | |
| GAGGCTAAAACTCTTAAATA+TGG | - | chr3.4:77218143-77218162 | None:intergenic | 30.0% | |
| GCTTATTGGAATAGAAGTTA+TGG | + | chr3.4:77218515-77218534 | MS.gene69756:CDS | 30.0% | |
| GTGAGAACACAAATGTTAAA+TGG | - | chr3.4:77217668-77217687 | None:intergenic | 30.0% | |
| TAAATAGCTTCTCCATTAAG+TGG | - | chr3.4:77218232-77218251 | None:intergenic | 30.0% | |
| TAAATTGCCTCAACAATTCT+TGG | - | chr3.4:77219020-77219039 | None:intergenic | 30.0% | |
| TAATCATGAGAATTCTCAAG+AGG | - | chr3.4:77217073-77217092 | None:intergenic | 30.0% | |
| TACTCATCTTCATTGTTTCA+TGG | - | chr3.4:77218959-77218978 | None:intergenic | 30.0% | |
| TATCTTTGTTCTTCCAATGT+TGG | - | chr3.4:77218893-77218912 | None:intergenic | 30.0% | |
| TTGCAATTTATCTGCATTCA+GGG | + | chr3.4:77217955-77217974 | MS.gene69756:intron | 30.0% | |
| TTGCAATTTCTCTTCATTCA+GGG | - | chr3.4:77217805-77217824 | None:intergenic | 30.0% | |
| TTTGCAATTTATCTGCATTC+AGG | + | chr3.4:77217954-77217973 | MS.gene69756:intron | 30.0% | |
| TTTGCAATTTCTCTTCATTC+AGG | - | chr3.4:77217806-77217825 | None:intergenic | 30.0% | |
| ! | AACATGGAACAGAACAATTT+TGG | + | chr3.4:77218821-77218840 | MS.gene69756:CDS | 30.0% |
| ! | ACCTTCATCTTTTAAGCTAA+GGG | + | chr3.4:77217731-77217750 | MS.gene69756:intron | 30.0% |
| ! | ACTTTGCTATGTTACTTAAG+TGG | - | chr3.4:77217284-77217303 | None:intergenic | 30.0% |
| ! | ATCCCAAAAATTAGCTTAAG+GGG | - | chr3.4:77218028-77218047 | None:intergenic | 30.0% |
| ! | ATTCCCCTTAAGCTAATTTT+TGG | + | chr3.4:77218022-77218041 | MS.gene69756:intron | 30.0% |
| ! | CAAGCTTAAGGAAATTTTGT+TGG | + | chr3.4:77219145-77219164 | MS.gene69756:CDS | 30.0% |
| ! | CATCCCAAAAATTAGCTTAA+GGG | - | chr3.4:77218029-77218048 | None:intergenic | 30.0% |
| ! | CTTTTAGTGATGTTCTTGAT+TGG | + | chr3.4:77219084-77219103 | MS.gene69756:CDS | 30.0% |
| ! | TCATCCCAAAAATTAGCTTA+AGG | - | chr3.4:77218030-77218049 | None:intergenic | 30.0% |
| ! | TTCCCCTTAAGCTAATTTTT+GGG | + | chr3.4:77218023-77218042 | MS.gene69756:intron | 30.0% |
| !!! | GCTAATTTTTGGGATGAAAT+TGG | + | chr3.4:77218033-77218052 | MS.gene69756:intron | 30.0% |
| AAATCTAGTCGTGCAAATGA+TGG | - | chr3.4:77219677-77219696 | None:intergenic | 35.0% | |
| AACTCAATCACTTGGTTATG+AGG | - | chr3.4:77217698-77217717 | None:intergenic | 35.0% | |
| AACTTTGTTACGTTCTCTCT+AGG | - | chr3.4:77217372-77217391 | None:intergenic | 35.0% | |
| AAGTAGACATGAGCTTCATT+TGG | - | chr3.4:77218380-77218399 | None:intergenic | 35.0% | |
| ACTAACGAAGTCTACATTCA+GGG | + | chr3.4:77217862-77217881 | MS.gene69756:intron | 35.0% | |
| ACTAACGAAGTTTGCATTCA+GGG | + | chr3.4:77217894-77217913 | MS.gene69756:intron | 35.0% | |
| AGAAATTTGGAGAAGGTTGA+AGG | + | chr3.4:77216983-77217002 | MS.gene69756:CDS | 35.0% | |
| AGGAGATAGAAATTTGGAGA+AGG | + | chr3.4:77216976-77216995 | MS.gene69756:CDS | 35.0% | |
| ATAGATAGATGCGTACACTT+AGG | - | chr3.4:77219557-77219576 | None:intergenic | 35.0% | |
| ATTTGCACGACTAGATTTAG+CGG | + | chr3.4:77219679-77219698 | MS.gene69756:CDS | 35.0% | |
| CAACTCTTAACGAATTCTTC+CGG | + | chr3.4:77219484-77219503 | MS.gene69756:intron | 35.0% | |
| CATGCTTTCTTGTCATGATT+GGG | + | chr3.4:77218550-77218569 | MS.gene69756:CDS | 35.0% | |
| CCTATAAGAAGATCAATGCA+AGG | + | chr3.4:77216956-77216975 | MS.gene69756:CDS | 35.0% | |
| GACTAACAAAGTCTACATTC+AGG | + | chr3.4:77217925-77217944 | MS.gene69756:intron | 35.0% | |
| GAGAATAAGGTGATAAGCAT+CGG | - | chr3.4:77219728-77219747 | None:intergenic | 35.0% | |
| GGAAATGATGCATCTTTCTT+TGG | - | chr3.4:77218750-77218769 | None:intergenic | 35.0% | |
| TAAAGTTAGCTCACATGATG+AGG | - | chr3.4:77217467-77217486 | None:intergenic | 35.0% | |
| TAGTGAAATTCCCAAGCTTA+AGG | + | chr3.4:77219133-77219152 | MS.gene69756:CDS | 35.0% | |
| TCATGCTTTCTTGTCATGAT+TGG | + | chr3.4:77218549-77218568 | MS.gene69756:CDS | 35.0% | |
| TCTCATGATTATGTTCCACA+AGG | + | chr3.4:77217082-77217101 | MS.gene69756:CDS | 35.0% | |
| TTCATTCTATATGGCTTAGG+AGG | + | chr3.4:77219276-77219295 | MS.gene69756:intron | 35.0% | |
| TTCCAATGTTGGAAAAGCAA+TGG | - | chr3.4:77218882-77218901 | None:intergenic | 35.0% | |
| ! | AATTTTGTTGGGTATCTCTG+AGG | + | chr3.4:77219157-77219176 | MS.gene69756:CDS | 35.0% |
| ! | AGTCACTTTAGTCCTTGAAT+GGG | + | chr3.4:77217759-77217778 | MS.gene69756:intron | 35.0% |
| ! | CACCTTCATCTTTTAAGCTA+AGG | + | chr3.4:77217730-77217749 | MS.gene69756:intron | 35.0% |
| ! | CATGACAAGAAAGCATGAAA+TGG | - | chr3.4:77218547-77218566 | None:intergenic | 35.0% |
| ! | CCTGAAATCAATTTGGTAAC+AGG | + | chr3.4:77218768-77218787 | MS.gene69756:CDS | 35.0% |
| ! | CCTGTTACCAAATTGATTTC+AGG | - | chr3.4:77218771-77218790 | None:intergenic | 35.0% |
| ! | CCTTCATCTTTTAAGCTAAG+GGG | + | chr3.4:77217732-77217751 | MS.gene69756:intron | 35.0% |
| ! | CCTTGCATTGATCTTCTTAT+AGG | - | chr3.4:77216959-77216978 | None:intergenic | 35.0% |
| ! | TAGTCACTTTAGTCCTTGAA+TGG | + | chr3.4:77217758-77217777 | MS.gene69756:intron | 35.0% |
| ! | TATTCGTGACAAAGCTGTTT+TGG | + | chr3.4:77218448-77218467 | MS.gene69756:CDS | 35.0% |
| !! | ATTCGTGACAAAGCTGTTTT+GGG | + | chr3.4:77218449-77218468 | MS.gene69756:CDS | 35.0% |
| !! | CTCAGAGGTTTTTGAGAATA+AGG | - | chr3.4:77219741-77219760 | None:intergenic | 35.0% |
| !! | GAAATGCCTTTGCTTTTCAT+AGG | + | chr3.4:77217116-77217135 | MS.gene69756:CDS | 35.0% |
| !!! | ACAATTTTGGCTTTCTTTGC+AGG | + | chr3.4:77218834-77218853 | MS.gene69756:CDS | 35.0% |
| AATCCACCTACATCGATACT+GGG | + | chr3.4:77217330-77217349 | MS.gene69756:intron | 40.0% | |
| ACCACTTCAACTCAATCACT+TGG | - | chr3.4:77217706-77217725 | None:intergenic | 40.0% | |
| AGAATTCTCAAGAGGCAGTA+CGG | - | chr3.4:77217065-77217084 | None:intergenic | 40.0% | |
| ATTGTATTTGTCCAAGTGGG+TGG | + | chr3.4:77218982-77219001 | MS.gene69756:CDS | 40.0% | |
| CAAGGACCATAGTGAAAAAG+AGG | - | chr3.4:77218284-77218303 | None:intergenic | 40.0% | |
| CCCCTTAGCTTAAAAGATGA+AGG | - | chr3.4:77217735-77217754 | None:intergenic | 40.0% | |
| GAAACAACAGGTTTACTTGG+TGG | + | chr3.4:77218792-77218811 | MS.gene69756:CDS | 40.0% | |
| GACTAACGAAGTCTACATTC+AGG | + | chr3.4:77217861-77217880 | MS.gene69756:intron | 40.0% | |
| GACTAACGAAGTTTGCATTC+AGG | + | chr3.4:77217893-77217912 | MS.gene69756:intron | 40.0% | |
| GGAGAAACAACAGGTTTACT+TGG | + | chr3.4:77218789-77218808 | MS.gene69756:CDS | 40.0% | |
| TAATCCACCTACATCGATAC+TGG | + | chr3.4:77217329-77217348 | MS.gene69756:intron | 40.0% | |
| TCATGTCTCACGTGAAACTT+GGG | - | chr3.4:77217557-77217576 | None:intergenic | 40.0% | |
| TCTTAACGAATTCTTCCGGA+AGG | + | chr3.4:77219488-77219507 | MS.gene69756:intron | 40.0% | |
| TTCATGTCTCACGTGAAACT+TGG | - | chr3.4:77217558-77217577 | None:intergenic | 40.0% | |
| TTCTTTGCAGGACAAATGCA+TGG | + | chr3.4:77218846-77218865 | MS.gene69756:CDS | 40.0% | |
| TTGTATTTGTCCAAGTGGGT+GGG | + | chr3.4:77218983-77219002 | MS.gene69756:CDS | 40.0% | |
| TTTCTGTAGATGTCTCCTTG+TGG | - | chr3.4:77217100-77217119 | None:intergenic | 40.0% | |
| ! | ACAGCTTTGTCACGAATAAC+TGG | - | chr3.4:77218446-77218465 | None:intergenic | 40.0% |
| ! | AGTCACTTTAGTCCCTGAAT+CGG | - | chr3.4:77218001-77218020 | None:intergenic | 40.0% |
| ! | CAGCTTTGTCACGAATAACT+GGG | - | chr3.4:77218445-77218464 | None:intergenic | 40.0% |
| ! | GTTTTGTGTATAGGGACCAA+GGG | + | chr3.4:77218647-77218666 | MS.gene69756:intron | 40.0% |
| ! | TTAGCATGGAAGTGTGTATG+TGG | + | chr3.4:77217600-77217619 | MS.gene69756:intron | 40.0% |
| ! | TTGGTAACAGGAGAAACAAC+AGG | + | chr3.4:77218780-77218799 | MS.gene69756:CDS | 40.0% |
| !! | ACCAAGTGATTGAGTTGAAG+TGG | + | chr3.4:77217702-77217721 | MS.gene69756:intron | 40.0% |
| !! | ATAAGCATCGGATGTGTGAA+AGG | - | chr3.4:77219716-77219735 | None:intergenic | 40.0% |
| !! | GAACCTCCTCTTTTTCACTA+TGG | + | chr3.4:77218275-77218294 | MS.gene69756:CDS | 40.0% |
| !! | GACCATTGCTTTTCCAACAT+TGG | + | chr3.4:77218877-77218896 | MS.gene69756:CDS | 40.0% |
| !! | TAAGCATCGGATGTGTGAAA+GGG | - | chr3.4:77219715-77219734 | None:intergenic | 40.0% |
| !!! | GCTGTTTTGGGAAGAACTAT+TGG | + | chr3.4:77218461-77218480 | MS.gene69756:CDS | 40.0% |
| AAGGGCAACATGGTATGTGA+AGG | + | chr3.4:77218665-77218684 | MS.gene69756:CDS | 45.0% | |
| ACTTTAGTCCCTGAATCGGA+AGG | - | chr3.4:77217997-77218016 | None:intergenic | 45.0% | |
| ATTGCAAAACAGTCCCTGCA+TGG | + | chr3.4:77217818-77217837 | MS.gene69756:intron | 45.0% | |
| CGAATTCTTCCGGAAGGAAA+TGG | + | chr3.4:77219494-77219513 | MS.gene69756:intron | 45.0% | |
| CTGGGTGAAAGAGATGTTCA+AGG | - | chr3.4:77218427-77218446 | None:intergenic | 45.0% | |
| CTTTAGTCCCTGAATCGGAA+GGG | - | chr3.4:77217996-77218015 | None:intergenic | 45.0% | |
| CTTTAGTCCTTGAATGGGAG+AGG | + | chr3.4:77217764-77217783 | MS.gene69756:intron | 45.0% | |
| GAAGGAAATGGATGCTGCAA+TGG | + | chr3.4:77219506-77219525 | MS.gene69756:intron | 45.0% | |
| GCGCTAACTCAATCTTTAGG+TGG | - | chr3.4:77217262-77217281 | None:intergenic | 45.0% | |
| GGACCATAGTGAAAAAGAGG+AGG | - | chr3.4:77218281-77218300 | None:intergenic | 45.0% | |
| GGCAAGTCCAAGAATTGTTG+AGG | + | chr3.4:77219010-77219029 | MS.gene69756:CDS | 45.0% | |
| GTGGCGCTAACTCAATCTTT+AGG | - | chr3.4:77217265-77217284 | None:intergenic | 45.0% | |
| TCCCTGAAATTGACCATGCA+GGG | - | chr3.4:77217834-77217853 | None:intergenic | 45.0% | |
| TCCCTGCATGGTCAATTTCA+GGG | + | chr3.4:77217830-77217849 | MS.gene69756:intron | 45.0% | |
| TTACGTTCTCTCTAGGTTGC+AGG | - | chr3.4:77217365-77217384 | None:intergenic | 45.0% | |
| TTCACATACCATGTTGCCCT+TGG | - | chr3.4:77218666-77218685 | None:intergenic | 45.0% | |
| TTGCAGCATCCATTTCCTTC+CGG | - | chr3.4:77219506-77219525 | None:intergenic | 45.0% | |
| ! | CATGGAAGTGTGTATGTGGT+TGG | + | chr3.4:77217604-77217623 | MS.gene69756:intron | 45.0% |
| ! | TACTTGGTGGCTATCCAACA+TGG | + | chr3.4:77218805-77218824 | MS.gene69756:CDS | 45.0% |
| !! | AGTCGTGCAAATGATGGACA+GGG | - | chr3.4:77219671-77219690 | None:intergenic | 45.0% |
| !! | GATTCTCCCAGTATCGATGT+AGG | - | chr3.4:77217339-77217358 | None:intergenic | 45.0% |
| !! | GGTGTCATTGGTTCTCAACA+AGG | - | chr3.4:77217044-77217063 | None:intergenic | 45.0% |
| !! | GGTTTTGTGTATAGGGACCA+AGG | + | chr3.4:77218646-77218665 | MS.gene69756:intron | 45.0% |
| !! | TAGTCGTGCAAATGATGGAC+AGG | - | chr3.4:77219672-77219691 | None:intergenic | 45.0% |
| GACGAATCCCTTCCGATTCA+GGG | + | chr3.4:77217986-77218005 | MS.gene69756:intron | 50.0% | |
| GACGAATCCTCTCCCATTCA+AGG | - | chr3.4:77217774-77217793 | None:intergenic | 50.0% | |
| GTCCCTGAAATTGACCATGC+AGG | - | chr3.4:77217835-77217854 | None:intergenic | 50.0% | |
| GTCCCTGCATGGTCAATTTC+AGG | + | chr3.4:77217829-77217848 | MS.gene69756:intron | 50.0% | |
| TATAGGGACCAAGGGCAACA+TGG | + | chr3.4:77218655-77218674 | MS.gene69756:intron | 50.0% | |
| TGACGAATCCCTTCCGATTC+AGG | + | chr3.4:77217985-77218004 | MS.gene69756:intron | 50.0% | |
| TGCACGACTAGATTTAGCGG+CGG | + | chr3.4:77219682-77219701 | MS.gene69756:CDS | 50.0% | |
| !! | AAGAGGCAGTACGGTGTCAT+TGG | - | chr3.4:77217056-77217075 | None:intergenic | 50.0% |
| !! | GTCGTGCAAATGATGGACAG+GGG | - | chr3.4:77219670-77219689 | None:intergenic | 50.0% |
| !! | TCTCCCAGTATCGATGTAGG+TGG | - | chr3.4:77217336-77217355 | None:intergenic | 50.0% |
| GGACAGGGGATAGCATCGTA+CGG | - | chr3.4:77219656-77219675 | None:intergenic | 55.0% | |
| TTGTCCAAGTGGGTGGGAAG+TGG | + | chr3.4:77218989-77219008 | MS.gene69756:CDS | 55.0% | |
| ! | CTTGCCACTTCCCACCCACT+TGG | - | chr3.4:77218996-77219015 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 77216917 | 77219772 | 77216917 | ID=MS.gene69756 |
| chr3.4 | mRNA | 77216917 | 77219772 | 77216917 | ID=MS.gene69756.t1;Parent=MS.gene69756 |
| chr3.4 | exon | 77216917 | 77217137 | 77216917 | ID=MS.gene69756.t1.exon1;Parent=MS.gene69756.t1 |
| chr3.4 | CDS | 77216917 | 77217137 | 77216917 | ID=cds.MS.gene69756.t1;Parent=MS.gene69756.t1 |
| chr3.4 | exon | 77218223 | 77218571 | 77218223 | ID=MS.gene69756.t1.exon2;Parent=MS.gene69756.t1 |
| chr3.4 | CDS | 77218223 | 77218571 | 77218223 | ID=cds.MS.gene69756.t1;Parent=MS.gene69756.t1 |
| chr3.4 | exon | 77218660 | 77219259 | 77218660 | ID=MS.gene69756.t1.exon3;Parent=MS.gene69756.t1 |
| chr3.4 | CDS | 77218660 | 77219259 | 77218660 | ID=cds.MS.gene69756.t1;Parent=MS.gene69756.t1 |
| chr3.4 | exon | 77219510 | 77219560 | 77219510 | ID=MS.gene69756.t1.exon4;Parent=MS.gene69756.t1 |
| chr3.4 | CDS | 77219510 | 77219560 | 77219510 | ID=cds.MS.gene69756.t1;Parent=MS.gene69756.t1 |
| chr3.4 | exon | 77219653 | 77219772 | 77219653 | ID=MS.gene69756.t1.exon5;Parent=MS.gene69756.t1 |
| chr3.4 | CDS | 77219653 | 77219772 | 77219653 | ID=cds.MS.gene69756.t1;Parent=MS.gene69756.t1 |
| Gene Sequence |
| Protein sequence |
