Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07091.t1 | XP_003626013.1 | 99.3 | 724 | 2 | 1 | 1 | 721 | 1 | 724 | 0.00E+00 | 1417.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07091.t1 | Q9M1P7 | 81.0 | 720 | 112 | 6 | 1 | 715 | 1 | 700 | 0.0e+00 | 1147.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07091.t1 | G7KTQ1 | 99.3 | 724 | 2 | 1 | 1 | 721 | 1 | 724 | 0.0e+00 | 1417.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050436 | MS.gene07091 | 0.993365 | 3.10E-199 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene07091 | MS.gene071065 | PPI |
| MS.gene07091 | MS.gene87672 | PPI |
| MS.gene07091 | MS.gene067090 | PPI |
| MS.gene07091 | MS.gene98782 | PPI |
| MS.gene07091 | MS.gene78458 | PPI |
| MS.gene036929 | MS.gene07091 | PPI |
| MS.gene07091 | MS.gene62009 | PPI |
| MS.gene07091 | MS.gene27517 | PPI |
| MS.gene07091 | MS.gene44764 | PPI |
| MS.gene07091 | MS.gene75518 | PPI |
| MS.gene07091 | MS.gene92776 | PPI |
| MS.gene07091 | MS.gene022025 | PPI |
| MS.gene07091 | MS.gene77305 | PPI |
| MS.gene07091 | MS.gene75990 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07091.t1 | MTR_7g110000 | 99.309 | 724 | 2 | 1 | 1 | 721 | 1 | 724 | 0.0 | 1476 |
| MS.gene07091.t1 | MTR_3g077670 | 74.538 | 703 | 157 | 8 | 1 | 695 | 1 | 689 | 0.0 | 1012 |
| MS.gene07091.t1 | MTR_2g032690 | 75.193 | 649 | 156 | 2 | 1 | 646 | 1 | 647 | 0.0 | 998 |
| MS.gene07091.t1 | MTR_3g107730 | 57.895 | 684 | 253 | 7 | 7 | 676 | 4 | 666 | 0.0 | 786 |
| MS.gene07091.t1 | MTR_0459s0020 | 59.422 | 658 | 245 | 7 | 1 | 647 | 9 | 655 | 0.0 | 781 |
| MS.gene07091.t1 | MTR_1g011840 | 56.375 | 651 | 260 | 4 | 7 | 647 | 3 | 639 | 0.0 | 750 |
| MS.gene07091.t1 | MTR_3g107730 | 62.715 | 523 | 182 | 3 | 7 | 529 | 4 | 513 | 0.0 | 688 |
| MS.gene07091.t1 | MTR_0366s0020 | 54.351 | 655 | 199 | 6 | 1 | 647 | 9 | 571 | 0.0 | 679 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07091.t1 | AT3G62270 | 82.260 | 699 | 109 | 5 | 1 | 694 | 1 | 689 | 0.0 | 1168 |
| MS.gene07091.t1 | AT2G47160 | 80.305 | 721 | 121 | 8 | 1 | 717 | 1 | 704 | 0.0 | 1147 |
| MS.gene07091.t1 | AT2G47160 | 77.614 | 746 | 121 | 9 | 1 | 717 | 1 | 729 | 0.0 | 1134 |
| MS.gene07091.t1 | AT3G06450 | 72.377 | 648 | 168 | 5 | 3 | 646 | 5 | 645 | 0.0 | 975 |
| MS.gene07091.t1 | AT3G06450 | 72.377 | 648 | 168 | 5 | 3 | 646 | 5 | 645 | 0.0 | 975 |
| MS.gene07091.t1 | AT3G06450 | 72.377 | 648 | 168 | 5 | 3 | 646 | 5 | 645 | 0.0 | 975 |
| MS.gene07091.t1 | AT3G06450 | 72.377 | 648 | 168 | 5 | 3 | 646 | 5 | 645 | 0.0 | 975 |
| MS.gene07091.t1 | AT1G15460 | 60.030 | 663 | 250 | 7 | 8 | 660 | 13 | 670 | 0.0 | 821 |
| MS.gene07091.t1 | AT1G15460 | 60.030 | 663 | 250 | 7 | 8 | 660 | 13 | 670 | 0.0 | 821 |
| MS.gene07091.t1 | AT1G15460 | 62.397 | 609 | 224 | 3 | 8 | 615 | 13 | 617 | 0.0 | 806 |
| MS.gene07091.t1 | AT1G74810 | 57.447 | 658 | 265 | 5 | 1 | 647 | 1 | 654 | 0.0 | 790 |
| MS.gene07091.t1 | AT1G74810 | 57.447 | 658 | 265 | 5 | 1 | 647 | 1 | 654 | 0.0 | 790 |
| MS.gene07091.t1 | AT1G74810 | 57.447 | 658 | 265 | 5 | 1 | 647 | 1 | 654 | 0.0 | 790 |
| MS.gene07091.t1 | AT5G25430 | 56.269 | 670 | 265 | 10 | 7 | 661 | 9 | 665 | 0.0 | 768 |
| MS.gene07091.t1 | AT1G74810 | 58.158 | 619 | 249 | 4 | 35 | 647 | 8 | 622 | 0.0 | 752 |
| MS.gene07091.t1 | AT1G74810 | 58.158 | 619 | 249 | 4 | 35 | 647 | 8 | 622 | 0.0 | 752 |
| MS.gene07091.t1 | AT4G32510 | 53.869 | 685 | 286 | 6 | 1 | 665 | 1 | 675 | 0.0 | 750 |
| MS.gene07091.t1 | AT4G32510 | 54.303 | 674 | 279 | 5 | 1 | 655 | 1 | 664 | 0.0 | 749 |
| MS.gene07091.t1 | AT1G15460 | 57.996 | 569 | 224 | 7 | 102 | 660 | 1 | 564 | 0.0 | 671 |
| MS.gene07091.t1 | AT1G74810 | 56.159 | 552 | 232 | 4 | 102 | 647 | 1 | 548 | 0.0 | 646 |
| MS.gene07091.t1 | AT1G74810 | 55.534 | 515 | 219 | 4 | 139 | 647 | 1 | 511 | 0.0 | 587 |
Find 169 sgRNAs with CRISPR-Local
Find 259 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGGGCTACTTTGCCTTTA+TGG | 0.123064 | 7.2:+6283526 | MS.gene07091:CDS |
| TCATTATGATTTGCTCCTTT+TGG | 0.138425 | 7.2:+6282737 | MS.gene07091:CDS |
| ACATTATTGTGTGGCCTTAT+TGG | 0.170662 | 7.2:+6282862 | MS.gene07091:CDS |
| TGATTCACTTTACAGGATTT+TGG | 0.172961 | 7.2:+6280947 | MS.gene07091:intron |
| GTTCCTGTTGTGTTCATAAT+TGG | 0.189623 | 7.2:+6282606 | MS.gene07091:CDS |
| AATAATGCTATTGTCTTAAA+AGG | 0.213365 | 7.2:-6283768 | None:intergenic |
| TTGTCTTGGTGTTTGGAATC+AGG | 0.217098 | 7.2:-6284385 | None:intergenic |
| ATTTATCTATTTATATGTTT+TGG | 0.242133 | 7.2:+6283807 | MS.gene07091:CDS |
| TGCTTTGATACTATTCTTAC+TGG | 0.270594 | 7.2:+6281769 | MS.gene07091:CDS |
| ACCTGACAATCTCATTTCTT+TGG | 0.287431 | 7.2:-6284341 | None:intergenic |
| CTATTCTTACTGGCCATCTT+AGG | 0.291093 | 7.2:+6281779 | MS.gene07091:CDS |
| CTTTCCCAAAACTGGTTTCC+AGG | 0.295534 | 7.2:-6283563 | None:intergenic |
| TAAACTTTCAATTGCCATAA+AGG | 0.296865 | 7.2:-6283540 | None:intergenic |
| AATACCAACTTCAGTACTTT+GGG | 0.301075 | 7.2:+6283508 | MS.gene07091:CDS |
| TTATTTCTTGTCTTGGTGTT+TGG | 0.301293 | 7.2:-6284392 | None:intergenic |
| GCGCCGGGCGACCACGGATT+TGG | 0.306746 | 7.2:-6282434 | None:intergenic |
| AAAGGATCCTTTCCCAAAAC+TGG | 0.307317 | 7.2:-6283571 | None:intergenic |
| CATTCAAGCAGCTACGAGTA+TGG | 0.307917 | 7.2:+6283331 | MS.gene07091:CDS |
| AATCTCATTTCTTTGGTCAT+TGG | 0.313846 | 7.2:-6284334 | None:intergenic |
| TTCGCTTTGGTCCTTTCATT+TGG | 0.315725 | 7.2:+6282127 | MS.gene07091:CDS |
| GTTTACCTGGAAACCAGTTT+TGG | 0.316421 | 7.2:+6283558 | MS.gene07091:CDS |
| GGAGTGGAGCTATTGATCTT+TGG | 0.338665 | 7.2:-6284196 | None:intergenic |
| GCAATACCTGTCATTTCATT+TGG | 0.339007 | 7.2:+6280999 | MS.gene07091:CDS |
| GATTTCGTATCTTCTCTCTT+TGG | 0.340460 | 7.2:-6282064 | None:intergenic |
| CGACTATGGTGTGCCACTTA+TGG | 0.341912 | 7.2:+6282337 | MS.gene07091:CDS |
| CTTCGTGGAGGTTTGCTAAT+GGG | 0.346782 | 7.2:+6282101 | MS.gene07091:CDS |
| AAAACATATAAATAGATAAA+TGG | 0.347506 | 7.2:-6283805 | None:intergenic |
| CGTTGTTCCTTTACCTCAAC+AGG | 0.355491 | 7.2:-6283419 | None:intergenic |
| CAAGAAGCCGTGGTGAATTT+AGG | 0.358792 | 7.2:+6284158 | MS.gene07091:CDS |
| CCTTCGTGGAGGTTTGCTAA+TGG | 0.359784 | 7.2:+6282100 | MS.gene07091:CDS |
| AACCGCTTTACCCGAATTGC+GGG | 0.360056 | 7.2:+6281818 | MS.gene07091:CDS |
| TTGGGTAGAAACCTGTTTCT+TGG | 0.364718 | 7.2:+6281330 | MS.gene07091:CDS |
| TCTTAAATTATTTCTTGTCT+TGG | 0.364780 | 7.2:-6284399 | None:intergenic |
| TGCCACTTATGGTCCTAGTT+TGG | 0.369045 | 7.2:+6282348 | MS.gene07091:CDS |
| TGCGGTATGACTCCGTTTGC+AGG | 0.370416 | 7.2:-6282892 | None:intergenic |
| CAAACAACTCTCCCGCAATT+CGG | 0.374938 | 7.2:-6281829 | None:intergenic |
| CGAATTGCGGGAGAGTTGTT+TGG | 0.375063 | 7.2:+6281830 | MS.gene07091:CDS |
| TTCTTTGGTCATTGGACTGT+TGG | 0.381083 | 7.2:-6284326 | None:intergenic |
| GGGAGAAAGTATTGTCTTAG+TGG | 0.386465 | 7.2:-6283888 | None:intergenic |
| TTAGGATCATTTCTTGGTGT+TGG | 0.387898 | 7.2:-6284217 | None:intergenic |
| AAATACCAACTTCAGTACTT+TGG | 0.388661 | 7.2:+6283507 | MS.gene07091:CDS |
| TGCTAATGGGATGTTCGCTT+TGG | 0.391611 | 7.2:+6282114 | MS.gene07091:CDS |
| TTGCAGGAGGAATTCCAATA+AGG | 0.392276 | 7.2:-6282876 | None:intergenic |
| CGCCCGGCGCATATGACAAT+TGG | 0.395913 | 7.2:+6282447 | MS.gene07091:CDS |
| GCACACCATAGTCGGCTATA+AGG | 0.404541 | 7.2:-6282328 | None:intergenic |
| ATCAGTAAGAATGCTAGTTT+AGG | 0.405750 | 7.2:+6283106 | MS.gene07091:CDS |
| CAGCTGCATCCAAGTCTTGA+AGG | 0.411041 | 7.2:-6283932 | None:intergenic |
| TGCTAAAGAAAGACCTGAGT+TGG | 0.415592 | 7.2:+6281311 | MS.gene07091:CDS |
| TGACAATTGGACTGTTGTTA+AGG | 0.417329 | 7.2:+6282460 | MS.gene07091:CDS |
| ATATAAATAGATAAATGGTT+TGG | 0.420632 | 7.2:-6283800 | None:intergenic |
| AACCTGTTTCTTGGATGGGC+TGG | 0.422896 | 7.2:+6281339 | MS.gene07091:CDS |
| AGGCGCCTTGGGATACCGTT+TGG | 0.423298 | 7.2:-6282404 | None:intergenic |
| GCTAGTTTAGGACAGTTATA+CGG | 0.423941 | 7.2:+6283118 | MS.gene07091:CDS |
| TGTCTTGGTGTTTGGAATCA+GGG | 0.423999 | 7.2:-6284384 | None:intergenic |
| CATACTCGTAGCTGCTTGAA+TGG | 0.424821 | 7.2:-6283330 | None:intergenic |
| TTGGACTAAAGAGGCGCCTT+GGG | 0.427252 | 7.2:-6282415 | None:intergenic |
| ACCAAAGAAATGAGATTGTC+AGG | 0.428973 | 7.2:+6284340 | MS.gene07091:CDS |
| CTAACTTGGGTACCTATTGC+TGG | 0.436565 | 7.2:+6283831 | MS.gene07091:CDS |
| AGCACTGCAATCATAGTTGC+TGG | 0.439606 | 7.2:-6282639 | None:intergenic |
| GGAAACATGACTCCAGCAAT+AGG | 0.440092 | 7.2:-6283843 | None:intergenic |
| TCGGTGCTGTGAAAAGTAAA+AGG | 0.440388 | 7.2:-6283589 | None:intergenic |
| AAACAACTCTCCCGCAATTC+GGG | 0.442782 | 7.2:-6281828 | None:intergenic |
| CTTGCTTCCTGTTGAGGTAA+AGG | 0.444141 | 7.2:+6283412 | MS.gene07091:CDS |
| AGTCCTCGGTCTGGCGTAAG+AGG | 0.444825 | 7.2:+6284301 | MS.gene07091:CDS |
| TAACTTGCTTCAATCAGTAT+TGG | 0.448829 | 7.2:+6283448 | MS.gene07091:CDS |
| GTAGAAACCTGTTTCTTGGA+TGG | 0.449097 | 7.2:+6281334 | MS.gene07091:CDS |
| GAACAACTAGAGAGAAATAC+TGG | 0.450622 | 7.2:+6281023 | MS.gene07091:CDS |
| ATCCAGCCCATCCAAGAAAC+AGG | 0.452822 | 7.2:-6281341 | None:intergenic |
| TAATGTGCTACAAGCAAGAT+TGG | 0.456259 | 7.2:+6280759 | MS.gene07091:CDS |
| CTTCAATCAGTATTGGTTGG+AGG | 0.463638 | 7.2:+6283455 | MS.gene07091:CDS |
| GGAGCTGGTGCTTCTCATAT+CGG | 0.465563 | 7.2:+6284106 | MS.gene07091:CDS |
| AAGGCTAGATCATGGCGTTA+TGG | 0.470484 | 7.2:+6282178 | MS.gene07091:CDS |
| ATGGCAATTGAAAGTTTACC+TGG | 0.470571 | 7.2:+6283545 | MS.gene07091:CDS |
| GCTCCAATTATGAACACAAC+AGG | 0.475392 | 7.2:-6282609 | None:intergenic |
| ATCATTTCTTGGTGTTGGAG+TGG | 0.476671 | 7.2:-6284212 | None:intergenic |
| CTTGGATGCAGCTGAGTATG+AGG | 0.477776 | 7.2:+6283941 | MS.gene07091:CDS |
| TTTGGACTAAAGAGGCGCCT+TGG | 0.478346 | 7.2:-6282416 | None:intergenic |
| TCTAGCAACTCTTAAACATC+AGG | 0.479084 | 7.2:+6282936 | MS.gene07091:CDS |
| GGCATTATACACTCAATCAT+TGG | 0.482191 | 7.2:+6281219 | MS.gene07091:CDS |
| AGTCCAAATCCGTGGTCGCC+CGG | 0.483928 | 7.2:+6282431 | MS.gene07091:CDS |
| ATTTACTTGTATCTTCTGCT+CGG | 0.484482 | 7.2:-6283608 | None:intergenic |
| TTGCTTCAATCAGTATTGGT+TGG | 0.485493 | 7.2:+6283452 | MS.gene07091:CDS |
| CGTAGCCTTATAGCCGACTA+TGG | 0.485953 | 7.2:+6282323 | MS.gene07091:CDS |
| TAAGAGGTGTCTGCATTTGA+TGG | 0.489462 | 7.2:-6283159 | None:intergenic |
| TAGAAACCTGTTTCTTGGAT+GGG | 0.489881 | 7.2:+6281335 | MS.gene07091:CDS |
| TCGGGTAAAGCGGTTGATGA+TGG | 0.490490 | 7.2:-6281810 | None:intergenic |
| AGATGACTTGCTTCCTGTTG+AGG | 0.490643 | 7.2:+6283406 | MS.gene07091:CDS |
| GTCCTTGTGCCAGGGACTTG+TGG | 0.493396 | 7.2:+6282027 | MS.gene07091:intron |
| ATTGGAATTCCTCCTGCAAA+CGG | 0.495864 | 7.2:+6282880 | MS.gene07091:CDS |
| GTGGAATCAAAGCAGGTGTA+AGG | 0.505469 | 7.2:+6280786 | MS.gene07091:CDS |
| GCTAAAGAAAGACCTGAGTT+GGG | 0.505588 | 7.2:+6281312 | MS.gene07091:CDS |
| AGATCATGGCGTTATGGTAG+TGG | 0.507525 | 7.2:+6282184 | MS.gene07091:CDS |
| CTTATGGTCCTAGTTTGGAC+AGG | 0.509478 | 7.2:+6282353 | MS.gene07091:CDS |
| GAGAATTAAAAGAGAGGTGC+GGG | 0.510378 | 7.2:-6284252 | None:intergenic |
| AGAAATGAGATTGTCAGGTA+GGG | 0.510643 | 7.2:+6284345 | MS.gene07091:CDS |
| AAGAGAGGTGCGGGCTCAGA+CGG | 0.517099 | 7.2:-6284243 | None:intergenic |
| CAGCAATCTGAGTTTGGAGC+TGG | 0.517149 | 7.2:+6284091 | MS.gene07091:intron |
| AAGAAATGAGATTGTCAGGT+AGG | 0.518072 | 7.2:+6284344 | MS.gene07091:CDS |
| GATCGACTTACTCGAGCAGA+TGG | 0.522727 | 7.2:-6283193 | None:intergenic |
| AGGACACACCTGTCCAAACT+AGG | 0.523221 | 7.2:-6282361 | None:intergenic |
| TAGCCCCAAAGTACTGAAGT+TGG | 0.525039 | 7.2:-6283512 | None:intergenic |
| GATGGGTCCTGGTAAATAAG+AGG | 0.526245 | 7.2:-6283175 | None:intergenic |
| TTACTCGAGCAGATGGGTCC+TGG | 0.527068 | 7.2:-6283186 | None:intergenic |
| TATGGGAAACGTGGACGCCC+CGG | 0.529193 | 7.2:+6283349 | MS.gene07091:CDS |
| TCAAATATAGTCTCATCGAC+CGG | 0.529909 | 7.2:-6283368 | None:intergenic |
| ACTGAGCAAAGTCCTCGGTC+TGG | 0.531263 | 7.2:+6284292 | MS.gene07091:CDS |
| AGTCCAATTGTCATATGCGC+CGG | 0.534376 | 7.2:-6282450 | None:intergenic |
| ACATATTGAAGTTGATGCCA+AGG | 0.539736 | 7.2:-6281196 | None:intergenic |
| CAAATATAGTCTCATCGACC+GGG | 0.540975 | 7.2:-6283367 | None:intergenic |
| GCTAGACTCTTTGTATGCAT+CGG | 0.543376 | 7.2:-6282919 | None:intergenic |
| ATTCAAGCAGCTACGAGTAT+GGG | 0.543742 | 7.2:+6283332 | MS.gene07091:CDS |
| GCCACTCCTAAAATCAGTAA+AGG | 0.544686 | 7.2:-6281249 | None:intergenic |
| GTCCAATTGTCATATGCGCC+GGG | 0.545574 | 7.2:-6282449 | None:intergenic |
| TGTTCACCAAATGAAATGAC+AGG | 0.550764 | 7.2:-6281005 | None:intergenic |
| AAATCATAATGATAAGAAGA+TGG | 0.551493 | 7.2:-6282726 | None:intergenic |
| TCATTCTTGATACCTTCAAA+AGG | 0.552421 | 7.2:-6280722 | None:intergenic |
| TCTAACAGCTGTTCAAACCT+TGG | 0.553634 | 7.2:+6281179 | MS.gene07091:CDS |
| GTCCAAACTAGGACCATAAG+TGG | 0.562627 | 7.2:-6282350 | None:intergenic |
| TGCTACAAGCAAGATTGGAC+AGG | 0.567931 | 7.2:+6280764 | MS.gene07091:CDS |
| GGTATCAAGAATGATCTAAG+AGG | 0.570702 | 7.2:+6280731 | MS.gene07091:CDS |
| AGGTGCACACCTTCAAGACT+TGG | 0.572324 | 7.2:+6283923 | MS.gene07091:CDS |
| TGGACAGGTGGAATCAAAGC+AGG | 0.574832 | 7.2:+6280779 | MS.gene07091:CDS |
| GAAATGAGATTGTCAGGTAG+GGG | 0.575756 | 7.2:+6284346 | MS.gene07091:CDS |
| TAAGGAGAAGGCCAAATGAA+AGG | 0.576331 | 7.2:-6282138 | None:intergenic |
| CAATATATCTTACCGATGCA+AGG | 0.577470 | 7.2:-6283986 | None:intergenic |
| CAACCGCTTTACCCGAATTG+CGG | 0.578492 | 7.2:+6281817 | MS.gene07091:CDS |
| GATGGAACATGCTCCTAAGA+TGG | 0.580149 | 7.2:-6281792 | None:intergenic |
| ACTAAGAGCATGATCATCAA+AGG | 0.581858 | 7.2:-6283864 | None:intergenic |
| TGTTTCTTGGATGGGCTGGA+TGG | 0.584884 | 7.2:+6281343 | MS.gene07091:CDS |
| AAAGCAGAAAGGCTAGATCA+TGG | 0.585011 | 7.2:+6282170 | MS.gene07091:CDS |
| TTGGCATCAACTTCAATATG+TGG | 0.585839 | 7.2:+6281198 | MS.gene07091:CDS |
| TGCTGGAAGACATTATTGTG+TGG | 0.586710 | 7.2:+6282853 | MS.gene07091:intron |
| CATAAGTGGCACACCATAGT+CGG | 0.587251 | 7.2:-6282336 | None:intergenic |
| GCAGACACCTCTTATTTACC+AGG | 0.589449 | 7.2:+6283168 | MS.gene07091:CDS |
| ACCACGGATTTGGACTAAAG+AGG | 0.593964 | 7.2:-6282424 | None:intergenic |
| TGTTTGGAATCAGGGTTGAG+AGG | 0.594019 | 7.2:-6284376 | None:intergenic |
| TTTACCGTTCAACCTTGCAT+CGG | 0.594284 | 7.2:+6283974 | MS.gene07091:CDS |
| TCATATGCGCCGGGCGACCA+CGG | 0.597510 | 7.2:-6282440 | None:intergenic |
| AACAGGTTTCTACCCAACTC+AGG | 0.597836 | 7.2:-6281324 | None:intergenic |
| CTCCCGCAATTCGGGTAAAG+CGG | 0.606782 | 7.2:-6281820 | None:intergenic |
| CTTACCGATGCAAGGTTGAA+CGG | 0.608240 | 7.2:-6283978 | None:intergenic |
| TCGCGACTGAGCAAAGTCCT+CGG | 0.608512 | 7.2:+6284287 | MS.gene07091:CDS |
| GGTGCTTCTCATATCGGAGA+AGG | 0.609058 | 7.2:+6284112 | MS.gene07091:CDS |
| ATACCAACTTCAGTACTTTG+GGG | 0.618229 | 7.2:+6283509 | MS.gene07091:CDS |
| CCGTTTGGAACACTTGCAGT+CGG | 0.622641 | 7.2:-6282389 | None:intergenic |
| TCAAGAATGATCTAAGAGGA+AGG | 0.623945 | 7.2:+6280735 | MS.gene07091:CDS |
| CCGACTGCAAGTGTTCCAAA+CGG | 0.624889 | 7.2:+6282389 | MS.gene07091:CDS |
| GTGTTCCAAACGGTATCCCA+AGG | 0.628714 | 7.2:+6282399 | MS.gene07091:CDS |
| AATGTGTACATGATCACAGT+AGG | 0.629188 | 7.2:-6281276 | None:intergenic |
| CTTACTGATACTGTTTCGAG+CGG | 0.639834 | 7.2:-6283092 | None:intergenic |
| GAAGTTATCACAAGAAGCCG+TGG | 0.642922 | 7.2:+6284148 | MS.gene07091:CDS |
| ATTATACACTCAATCATTGG+TGG | 0.645714 | 7.2:+6281222 | MS.gene07091:CDS |
| CGAGAATTAAAAGAGAGGTG+CGG | 0.646333 | 7.2:-6284253 | None:intergenic |
| GTGACAAATGATTAGGCACA+AGG | 0.648110 | 7.2:+6283284 | MS.gene07091:intron |
| TACAAGCAAGATTGGACAGG+TGG | 0.649360 | 7.2:+6280767 | MS.gene07091:CDS |
| ATCGACTTACTCGAGCAGAT+GGG | 0.649721 | 7.2:-6283192 | None:intergenic |
| CTGTTTCAACAAAAGTAGCA+TGG | 0.650562 | 7.2:-6283743 | None:intergenic |
| GCCTCTTTAGTCCAAATCCG+TGG | 0.651698 | 7.2:+6282423 | MS.gene07091:CDS |
| AACACTTGCAGTCGGCATGT+AGG | 0.670569 | 7.2:-6282381 | None:intergenic |
| TTTGTATGCATCGGAGACTG+CGG | 0.679679 | 7.2:-6282910 | None:intergenic |
| AAATATAGTCTCATCGACCG+GGG | 0.685107 | 7.2:-6283366 | None:intergenic |
| GGTATGACTCCGTTTGCAGG+AGG | 0.685848 | 7.2:-6282889 | None:intergenic |
| GTGCCTCTTACGCCAGACCG+AGG | 0.694511 | 7.2:-6284304 | None:intergenic |
| TAGTATGCCTAAATTCACCA+CGG | 0.697327 | 7.2:-6284165 | None:intergenic |
| CCACACGAGAATTAAAAGAG+AGG | 0.699754 | 7.2:-6284258 | None:intergenic |
| AGCTACGAGTATGGGAAACG+TGG | 0.712689 | 7.2:+6283340 | MS.gene07091:CDS |
| TTATTACTTTGACCACAGTG+TGG | 0.712922 | 7.2:+6282662 | MS.gene07091:CDS |
| CCATTAGCAAACCTCCACGA+AGG | 0.724265 | 7.2:-6282100 | None:intergenic |
| AAAGCTGAGATGCCACACTG+TGG | 0.814882 | 7.2:-6282674 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAACATATAAATAGATAAA+TGG | - | chr7.2:6283808-6283827 | None:intergenic | 10.0% |
| !! | AACATTATTTATTAAAAAGA+TGG | + | chr7.2:6282514-6282533 | MS.gene07091:intron | 10.0% |
| !!! | ATTTATCTATTTATATGTTT+TGG | + | chr7.2:6283807-6283826 | MS.gene07091:CDS | 10.0% |
| !!! | TAACTATAAGTATATTATTT+TGG | + | chr7.2:6281069-6281088 | MS.gene07091:intron | 10.0% |
| !!! | TTAAATCTTTGTTTAATATA+TGG | + | chr7.2:6283247-6283266 | MS.gene07091:intron | 10.0% |
| !! | ATATAAATAGATAAATGGTT+TGG | - | chr7.2:6283803-6283822 | None:intergenic | 15.0% |
| !! | TATGAAAGTTATATTTCAAT+TGG | - | chr7.2:6280920-6280939 | None:intergenic | 15.0% |
| !! | TTTAATAAATAATGTTACAG+TGG | - | chr7.2:6282510-6282529 | None:intergenic | 15.0% |
| !!! | AAATTTTCTTTTAATGTGTA+GGG | + | chr7.2:6283707-6283726 | MS.gene07091:intron | 15.0% |
| !!! | AATAAATTTTAAGAAGGTTT+AGG | - | chr7.2:6283218-6283237 | None:intergenic | 15.0% |
| !!! | ATTATTAACTTGATTTTGTA+GGG | + | chr7.2:6281733-6281752 | MS.gene07091:intron | 15.0% |
| !!! | ATTTATTTAACTTTAACTAC+AGG | + | chr7.2:6282293-6282312 | MS.gene07091:intron | 15.0% |
| !!! | CAAGAAAATAAATTTTAAGA+AGG | - | chr7.2:6283224-6283243 | None:intergenic | 15.0% |
| !! | AAATCATAATGATAAGAAGA+TGG | - | chr7.2:6282729-6282748 | None:intergenic | 20.0% |
| !! | AATAATGCTATTGTCTTAAA+AGG | - | chr7.2:6283771-6283790 | None:intergenic | 20.0% |
| !! | ATTTATCTATCTATCAATGA+AGG | + | chr7.2:6281949-6281968 | MS.gene07091:intron | 20.0% |
| !! | CTAAGAGTTATAAATTAATC+AGG | - | chr7.2:6283000-6283019 | None:intergenic | 20.0% |
| !! | TCAAGTTAATAATGAAAACA+AGG | - | chr7.2:6281726-6281745 | None:intergenic | 20.0% |
| !! | TGTAACTAAAAAATGAACAA+TGG | + | chr7.2:6283033-6283052 | MS.gene07091:intron | 20.0% |
| !! | TTTGGATAAACAACTTAATT+AGG | + | chr7.2:6281435-6281454 | MS.gene07091:intron | 20.0% |
| !!! | AATATGTTGGTAAATAACTT+CGG | - | chr7.2:6282004-6282023 | None:intergenic | 20.0% |
| !!! | AATTAAGTTGTTTATCCAAA+CGG | - | chr7.2:6281435-6281454 | None:intergenic | 20.0% |
| !!! | ACTTAATTAGGTTTTGTTAT+TGG | + | chr7.2:6281447-6281466 | MS.gene07091:intron | 20.0% |
| !!! | ATATGTTTTCATAAAGGAAA+AGG | + | chr7.2:6281093-6281112 | MS.gene07091:intron | 20.0% |
| !!! | CAAATTTTCTTTTAATGTGT+AGG | + | chr7.2:6283706-6283725 | MS.gene07091:intron | 20.0% |
| !!! | CATTATTAACTTGATTTTGT+AGG | + | chr7.2:6281732-6281751 | MS.gene07091:intron | 20.0% |
| !!! | TTGCTTAATTCTTTTTCTAA+TGG | + | chr7.2:6282814-6282833 | MS.gene07091:intron | 20.0% |
| !!! | TTTGGAATATGTTTTCATAA+AGG | + | chr7.2:6281087-6281106 | MS.gene07091:intron | 20.0% |
| ! | AAAAAATATGTATGTTGTGG+GGG | - | chr7.2:6280973-6280992 | None:intergenic | 25.0% |
| ! | AGAAAAAGAATTAAGCAAGT+TGG | - | chr7.2:6282812-6282831 | None:intergenic | 25.0% |
| ! | AGCAAAAAATATGTATGTTG+TGG | - | chr7.2:6280976-6280995 | None:intergenic | 25.0% |
| ! | CAAAAAATATGTATGTTGTG+GGG | - | chr7.2:6280974-6280993 | None:intergenic | 25.0% |
| ! | GATAGCTTATAAAAGAAGTT+TGG | - | chr7.2:6281540-6281559 | None:intergenic | 25.0% |
| ! | GCAAAAAATATGTATGTTGT+GGG | - | chr7.2:6280975-6280994 | None:intergenic | 25.0% |
| ! | TAAACTTTCAATTGCCATAA+AGG | - | chr7.2:6283543-6283562 | None:intergenic | 25.0% |
| ! | TAATAATGAAAACAAGGCAA+TGG | - | chr7.2:6281720-6281739 | None:intergenic | 25.0% |
| !! | AATAAGTTGAAAACAGCTTA+TGG | + | chr7.2:6281576-6281595 | MS.gene07091:intron | 25.0% |
| !! | ACTTCTTTTATAAGCTATCA+TGG | + | chr7.2:6281541-6281560 | MS.gene07091:intron | 25.0% |
| !! | ATTAAGTTGTTTATCCAAAC+GGG | - | chr7.2:6281434-6281453 | None:intergenic | 25.0% |
| !! | ATTTAACTTTAACTACAGGT+TGG | + | chr7.2:6282297-6282316 | MS.gene07091:intron | 25.0% |
| !!! | AAATAAGGACATGTTTTGAT+TGG | - | chr7.2:6281665-6281684 | None:intergenic | 25.0% |
| !!! | AATGTTTTGATTCACTTTAC+AGG | + | chr7.2:6280940-6280959 | MS.gene07091:intron | 25.0% |
| !!! | TATATGTTTTGGACTAACTT+GGG | + | chr7.2:6283818-6283837 | MS.gene07091:CDS | 25.0% |
| !!! | TTATATGTTTTGGACTAACT+TGG | + | chr7.2:6283817-6283836 | MS.gene07091:CDS | 25.0% |
| !!! | TTTTTTTCTTCTTTCTGAAC+AGG | + | chr7.2:6282572-6282591 | MS.gene07091:intron | 25.0% |
| AAATACCAACTTCAGTACTT+TGG | + | chr7.2:6283507-6283526 | MS.gene07091:CDS | 30.0% | |
| AAGCTATCATGGATAACTTA+TGG | + | chr7.2:6281552-6281571 | MS.gene07091:intron | 30.0% | |
| AATACCAACTTCAGTACTTT+GGG | + | chr7.2:6283508-6283527 | MS.gene07091:CDS | 30.0% | |
| AATCTCATTTCTTTGGTCAT+TGG | - | chr7.2:6284337-6284356 | None:intergenic | 30.0% | |
| ACAGCACTAGAACATAAATA+AGG | - | chr7.2:6281680-6281699 | None:intergenic | 30.0% | |
| AGTTGGAAGTTTAATGAACT+AGG | - | chr7.2:6282795-6282814 | None:intergenic | 30.0% | |
| ATTATACACTCAATCATTGG+TGG | + | chr7.2:6281222-6281241 | MS.gene07091:CDS | 30.0% | |
| ATTTACTTGTATCTTCTGCT+CGG | - | chr7.2:6283611-6283630 | None:intergenic | 30.0% | |
| CAAATGATTACAAACAGTGA+CGG | - | chr7.2:6282257-6282276 | None:intergenic | 30.0% | |
| GTATAATTCATGTTTCTTGC+TGG | + | chr7.2:6282836-6282855 | MS.gene07091:intron | 30.0% | |
| GTTTAATATATGGCATGTGT+TGG | + | chr7.2:6283257-6283276 | MS.gene07091:intron | 30.0% | |
| TACTGCATTAAAAAGCAGAA+AGG | + | chr7.2:6282159-6282178 | MS.gene07091:CDS | 30.0% | |
| TCATTCTTGATACCTTCAAA+AGG | - | chr7.2:6280725-6280744 | None:intergenic | 30.0% | |
| TGCTTTGATACTATTCTTAC+TGG | + | chr7.2:6281769-6281788 | MS.gene07091:CDS | 30.0% | |
| TGGTATTGTGACAAATGATT+AGG | + | chr7.2:6283277-6283296 | MS.gene07091:intron | 30.0% | |
| TTATCTACTGATATAAGCAC+TGG | - | chr7.2:6281631-6281650 | None:intergenic | 30.0% | |
| ! | ATCAGTAAGAATGCTAGTTT+AGG | + | chr7.2:6283106-6283125 | MS.gene07091:CDS | 30.0% |
| ! | GAAACATTTGTACCTTTTGA+AGG | + | chr7.2:6280710-6280729 | MS.gene07091:CDS | 30.0% |
| ! | GTTGGTATTTTCTTGAGAAT+AGG | - | chr7.2:6283497-6283516 | None:intergenic | 30.0% |
| ! | TATTTTCTTGAGAATAGGCA+TGG | - | chr7.2:6283492-6283511 | None:intergenic | 30.0% |
| ! | TGATTCACTTTACAGGATTT+TGG | + | chr7.2:6280947-6280966 | MS.gene07091:intron | 30.0% |
| ! | TGTGCACCTTTGAAAAATTT+GGG | - | chr7.2:6283912-6283931 | None:intergenic | 30.0% |
| ! | TTTTTAATGCAGTAAGGAGA+AGG | - | chr7.2:6282153-6282172 | None:intergenic | 30.0% |
| !! | TAACTTGCTTCAATCAGTAT+TGG | + | chr7.2:6283448-6283467 | MS.gene07091:CDS | 30.0% |
| !! | TTATTTCTTGTCTTGGTGTT+TGG | - | chr7.2:6284395-6284414 | None:intergenic | 30.0% |
| !! | TTTCTCCCCAAATTTTTCAA+AGG | + | chr7.2:6283903-6283922 | MS.gene07091:CDS | 30.0% |
| !!! | CATTATGATTTGCTCCTTTT+GGG | + | chr7.2:6282738-6282757 | MS.gene07091:CDS | 30.0% |
| !!! | TCATTATGATTTGCTCCTTT+TGG | + | chr7.2:6282737-6282756 | MS.gene07091:CDS | 30.0% |
| !!! | TTCTGCTTTTTAATGCAGTA+AGG | - | chr7.2:6282159-6282178 | None:intergenic | 30.0% |
| AAACGGGACCTAAATGTATA+AGG | - | chr7.2:6281418-6281437 | None:intergenic | 35.0% | |
| AACGGGACCTAAATGTATAA+GGG | - | chr7.2:6281417-6281436 | None:intergenic | 35.0% | |
| AAGAAATGAGATTGTCAGGT+AGG | + | chr7.2:6284344-6284363 | MS.gene07091:CDS | 35.0% | |
| AATGTGTACATGATCACAGT+AGG | - | chr7.2:6281279-6281298 | None:intergenic | 35.0% | |
| ACCAAAGAAATGAGATTGTC+AGG | + | chr7.2:6284340-6284359 | MS.gene07091:CDS | 35.0% | |
| ACCTGACAATCTCATTTCTT+TGG | - | chr7.2:6284344-6284363 | None:intergenic | 35.0% | |
| AGAAATGAGATTGTCAGGTA+GGG | + | chr7.2:6284345-6284364 | MS.gene07091:CDS | 35.0% | |
| ATACCAACTTCAGTACTTTG+GGG | + | chr7.2:6283509-6283528 | MS.gene07091:CDS | 35.0% | |
| ATGGCAATTGAAAGTTTACC+TGG | + | chr7.2:6283545-6283564 | MS.gene07091:CDS | 35.0% | |
| CAATATATCTTACCGATGCA+AGG | - | chr7.2:6283989-6284008 | None:intergenic | 35.0% | |
| CGTCACTGTTTGTAATCATT+TGG | + | chr7.2:6282255-6282274 | MS.gene07091:intron | 35.0% | |
| CTGTTTCAACAAAAGTAGCA+TGG | - | chr7.2:6283746-6283765 | None:intergenic | 35.0% | |
| GAACAACTAGAGAGAAATAC+TGG | + | chr7.2:6281023-6281042 | MS.gene07091:CDS | 35.0% | |
| GATTAACAGCAATCTGAGTT+TGG | + | chr7.2:6284085-6284104 | MS.gene07091:intron | 35.0% | |
| GATTTCGTATCTTCTCTCTT+TGG | - | chr7.2:6282067-6282086 | None:intergenic | 35.0% | |
| GGCATTATACACTCAATCAT+TGG | + | chr7.2:6281219-6281238 | MS.gene07091:CDS | 35.0% | |
| GGTATCAAGAATGATCTAAG+AGG | + | chr7.2:6280731-6280750 | MS.gene07091:CDS | 35.0% | |
| GTCATACCAAAAATCCCAAA+AGG | - | chr7.2:6282755-6282774 | None:intergenic | 35.0% | |
| GTTCCTGTTGTGTTCATAAT+TGG | + | chr7.2:6282606-6282625 | MS.gene07091:CDS | 35.0% | |
| TAATGTGCTACAAGCAAGAT+TGG | + | chr7.2:6280759-6280778 | MS.gene07091:CDS | 35.0% | |
| TAGTATGCCTAAATTCACCA+CGG | - | chr7.2:6284168-6284187 | None:intergenic | 35.0% | |
| TCAAATATAGTCTCATCGAC+CGG | - | chr7.2:6283371-6283390 | None:intergenic | 35.0% | |
| TCAAGAATGATCTAAGAGGA+AGG | + | chr7.2:6280735-6280754 | MS.gene07091:CDS | 35.0% | |
| TCTAGCAACTCTTAAACATC+AGG | + | chr7.2:6282936-6282955 | MS.gene07091:CDS | 35.0% | |
| TCTTCTTTCTGAACAGGATA+TGG | + | chr7.2:6282578-6282597 | MS.gene07091:intron | 35.0% | |
| TGACAATTGGACTGTTGTTA+AGG | + | chr7.2:6282460-6282479 | MS.gene07091:CDS | 35.0% | |
| TGTTCACCAAATGAAATGAC+AGG | - | chr7.2:6281008-6281027 | None:intergenic | 35.0% | |
| TTATACATTTAGGTCCCGTT+TGG | + | chr7.2:6281417-6281436 | MS.gene07091:intron | 35.0% | |
| TTATTACTTTGACCACAGTG+TGG | + | chr7.2:6282662-6282681 | MS.gene07091:CDS | 35.0% | |
| TTGGCATCAACTTCAATATG+TGG | + | chr7.2:6281198-6281217 | MS.gene07091:CDS | 35.0% | |
| ! | ACTAAGAGCATGATCATCAA+AGG | - | chr7.2:6283867-6283886 | None:intergenic | 35.0% |
| ! | CAATTGAGTTTTTACCTTCG+TGG | + | chr7.2:6282086-6282105 | MS.gene07091:CDS | 35.0% |
| ! | GATTTTGTAGGGTATGTGTA+TGG | + | chr7.2:6281744-6281763 | MS.gene07091:intron | 35.0% |
| ! | GCAATACCTGTCATTTCATT+TGG | + | chr7.2:6280999-6281018 | MS.gene07091:CDS | 35.0% |
| ! | GCTAGTTTAGGACAGTTATA+CGG | + | chr7.2:6283118-6283137 | MS.gene07091:CDS | 35.0% |
| ! | GTGCACCTTTGAAAAATTTG+GGG | - | chr7.2:6283911-6283930 | None:intergenic | 35.0% |
| ! | GTGTGCACCTTTGAAAAATT+TGG | - | chr7.2:6283913-6283932 | None:intergenic | 35.0% |
| ! | GTTTTACTTCTCCATGTTTC+CGG | + | chr7.2:6281391-6281410 | MS.gene07091:intron | 35.0% |
| ! | TAGAAACCTGTTTCTTGGAT+GGG | + | chr7.2:6281335-6281354 | MS.gene07091:CDS | 35.0% |
| ! | TTAGGATCATTTCTTGGTGT+TGG | - | chr7.2:6284220-6284239 | None:intergenic | 35.0% |
| ! | TTTACCTGGAAACCAGTTTT+GGG | + | chr7.2:6283559-6283578 | MS.gene07091:CDS | 35.0% |
| !! | ACATATTGAAGTTGATGCCA+AGG | - | chr7.2:6281199-6281218 | None:intergenic | 35.0% |
| !! | ACATTATTGTGTGGCCTTAT+TGG | + | chr7.2:6282862-6282881 | MS.gene07091:CDS | 35.0% |
| !! | CTCTCTTTTAATTCTCGTGT+GGG | + | chr7.2:6284259-6284278 | MS.gene07091:CDS | 35.0% |
| !! | GTTGATTTGATACTTGCAGA+GGG | + | chr7.2:6281153-6281172 | MS.gene07091:intron | 35.0% |
| !! | TGTTGATTTGATACTTGCAG+AGG | + | chr7.2:6281152-6281171 | MS.gene07091:intron | 35.0% |
| !! | TTGCTTCAATCAGTATTGGT+TGG | + | chr7.2:6283452-6283471 | MS.gene07091:CDS | 35.0% |
| !!! | ACCTTTACTGATTTTAGGAG+TGG | + | chr7.2:6281248-6281267 | MS.gene07091:CDS | 35.0% |
| !!! | GGTCAACCTTTACTGATTTT+AGG | + | chr7.2:6281243-6281262 | MS.gene07091:CDS | 35.0% |
| !!! | TTTGCTCCTTTTGGGATTTT+TGG | + | chr7.2:6282746-6282765 | MS.gene07091:CDS | 35.0% |
| AAAGCAGAAAGGCTAGATCA+TGG | + | chr7.2:6282170-6282189 | MS.gene07091:CDS | 40.0% | |
| AAAGGATCCTTTCCCAAAAC+TGG | - | chr7.2:6283574-6283593 | None:intergenic | 40.0% | |
| AAATATAGTCTCATCGACCG+GGG | - | chr7.2:6283369-6283388 | None:intergenic | 40.0% | |
| ATATTGTTGTCCTTGTGCCA+GGG | + | chr7.2:6282019-6282038 | MS.gene07091:intron | 40.0% | |
| ATTCAAGCAGCTACGAGTAT+GGG | + | chr7.2:6283332-6283351 | MS.gene07091:CDS | 40.0% | |
| ATTGGAATTCCTCCTGCAAA+CGG | + | chr7.2:6282880-6282899 | MS.gene07091:CDS | 40.0% | |
| CAAATATAGTCTCATCGACC+GGG | - | chr7.2:6283370-6283389 | None:intergenic | 40.0% | |
| CCACACGAGAATTAAAAGAG+AGG | - | chr7.2:6284261-6284280 | None:intergenic | 40.0% | |
| CGAGAATTAAAAGAGAGGTG+CGG | - | chr7.2:6284256-6284275 | None:intergenic | 40.0% | |
| CTATTCTTACTGGCCATCTT+AGG | + | chr7.2:6281779-6281798 | MS.gene07091:CDS | 40.0% | |
| CTTACTGATACTGTTTCGAG+CGG | - | chr7.2:6283095-6283114 | None:intergenic | 40.0% | |
| GAAATGAGATTGTCAGGTAG+GGG | + | chr7.2:6284346-6284365 | MS.gene07091:CDS | 40.0% | |
| GCACAAGGACAACAATATGT+TGG | - | chr7.2:6282017-6282036 | None:intergenic | 40.0% | |
| GCCACTCCTAAAATCAGTAA+AGG | - | chr7.2:6281252-6281271 | None:intergenic | 40.0% | |
| GCTAAAGAAAGACCTGAGTT+GGG | + | chr7.2:6281312-6281331 | MS.gene07091:CDS | 40.0% | |
| GCTAGACTCTTTGTATGCAT+CGG | - | chr7.2:6282922-6282941 | None:intergenic | 40.0% | |
| GCTCCAATTATGAACACAAC+AGG | - | chr7.2:6282612-6282631 | None:intergenic | 40.0% | |
| GTGACAAATGATTAGGCACA+AGG | + | chr7.2:6283284-6283303 | MS.gene07091:intron | 40.0% | |
| TAAGGAGAAGGCCAAATGAA+AGG | - | chr7.2:6282141-6282160 | None:intergenic | 40.0% | |
| TCTAACAGCTGTTCAAACCT+TGG | + | chr7.2:6281179-6281198 | MS.gene07091:CDS | 40.0% | |
| TGCTAAAGAAAGACCTGAGT+TGG | + | chr7.2:6281311-6281330 | MS.gene07091:CDS | 40.0% | |
| TGCTGGAAGACATTATTGTG+TGG | + | chr7.2:6282853-6282872 | MS.gene07091:intron | 40.0% | |
| TTCGCTTTGGTCCTTTCATT+TGG | + | chr7.2:6282127-6282146 | MS.gene07091:CDS | 40.0% | |
| TTCTTTGGTCATTGGACTGT+TGG | - | chr7.2:6284329-6284348 | None:intergenic | 40.0% | |
| TTGCAGGAGGAATTCCAATA+AGG | - | chr7.2:6282879-6282898 | None:intergenic | 40.0% | |
| TTTACCGTTCAACCTTGCAT+CGG | + | chr7.2:6283974-6283993 | MS.gene07091:CDS | 40.0% | |
| TTTCATGTTGCAGAGACAGT+CGG | - | chr7.2:6282225-6282244 | None:intergenic | 40.0% | |
| TTTCCGGCCCTTATACATTT+AGG | + | chr7.2:6281407-6281426 | MS.gene07091:intron | 40.0% | |
| ! | GAGAATTAAAAGAGAGGTGC+GGG | - | chr7.2:6284255-6284274 | None:intergenic | 40.0% |
| ! | GTAGAAACCTGTTTCTTGGA+TGG | + | chr7.2:6281334-6281353 | MS.gene07091:CDS | 40.0% |
| ! | GTTTACCTGGAAACCAGTTT+TGG | + | chr7.2:6283558-6283577 | MS.gene07091:CDS | 40.0% |
| ! | TTGAGTTTTTACCTTCGTGG+AGG | + | chr7.2:6282089-6282108 | MS.gene07091:CDS | 40.0% |
| ! | TTGGGTAGAAACCTGTTTCT+TGG | + | chr7.2:6281330-6281349 | MS.gene07091:CDS | 40.0% |
| !! | ATCATTTCTTGGTGTTGGAG+TGG | - | chr7.2:6284215-6284234 | None:intergenic | 40.0% |
| !! | CCTCTCTTTTAATTCTCGTG+TGG | + | chr7.2:6284258-6284277 | MS.gene07091:CDS | 40.0% |
| !! | CTTCAATCAGTATTGGTTGG+AGG | + | chr7.2:6283455-6283474 | MS.gene07091:CDS | 40.0% |
| !! | GGGAGAAAGTATTGTCTTAG+TGG | - | chr7.2:6283891-6283910 | None:intergenic | 40.0% |
| !! | TAAGAGGTGTCTGCATTTGA+TGG | - | chr7.2:6283162-6283181 | None:intergenic | 40.0% |
| !! | TCGGTGCTGTGAAAAGTAAA+AGG | - | chr7.2:6283592-6283611 | None:intergenic | 40.0% |
| !! | TGTCTTGGTGTTTGGAATCA+GGG | - | chr7.2:6284387-6284406 | None:intergenic | 40.0% |
| !! | TTGTCTTGGTGTTTGGAATC+AGG | - | chr7.2:6284388-6284407 | None:intergenic | 40.0% |
| !!! | CGGCTTTTAGGATCATTTCT+TGG | - | chr7.2:6284226-6284245 | None:intergenic | 40.0% |
| AAACAACTCTCCCGCAATTC+GGG | - | chr7.2:6281831-6281850 | None:intergenic | 45.0% | |
| AACAGGTTTCTACCCAACTC+AGG | - | chr7.2:6281327-6281346 | None:intergenic | 45.0% | |
| AAGGCTAGATCATGGCGTTA+TGG | + | chr7.2:6282178-6282197 | MS.gene07091:CDS | 45.0% | |
| ACCACGGATTTGGACTAAAG+AGG | - | chr7.2:6282427-6282446 | None:intergenic | 45.0% | |
| AGATCATGGCGTTATGGTAG+TGG | + | chr7.2:6282184-6282203 | MS.gene07091:CDS | 45.0% | |
| AGCACTGCAATCATAGTTGC+TGG | - | chr7.2:6282642-6282661 | None:intergenic | 45.0% | |
| AGTCCAATTGTCATATGCGC+CGG | - | chr7.2:6282453-6282472 | None:intergenic | 45.0% | |
| ATGTATAAGGGCCGGAAACA+TGG | - | chr7.2:6281405-6281424 | None:intergenic | 45.0% | |
| CAAACAACTCTCCCGCAATT+CGG | - | chr7.2:6281832-6281851 | None:intergenic | 45.0% | |
| CAAGAAGCCGTGGTGAATTT+AGG | + | chr7.2:6284158-6284177 | MS.gene07091:CDS | 45.0% | |
| CATAAGTGGCACACCATAGT+CGG | - | chr7.2:6282339-6282358 | None:intergenic | 45.0% | |
| CATACTCGTAGCTGCTTGAA+TGG | - | chr7.2:6283333-6283352 | None:intergenic | 45.0% | |
| CATATTGTTGTCCTTGTGCC+AGG | + | chr7.2:6282018-6282037 | MS.gene07091:intron | 45.0% | |
| CATTCAAGCAGCTACGAGTA+TGG | + | chr7.2:6283331-6283350 | MS.gene07091:CDS | 45.0% | |
| CGTTGTTCCTTTACCTCAAC+AGG | - | chr7.2:6283422-6283441 | None:intergenic | 45.0% | |
| CTAACTTGGGTACCTATTGC+TGG | + | chr7.2:6283831-6283850 | MS.gene07091:CDS | 45.0% | |
| CTTACCGATGCAAGGTTGAA+CGG | - | chr7.2:6283981-6284000 | None:intergenic | 45.0% | |
| CTTATGGTCCTAGTTTGGAC+AGG | + | chr7.2:6282353-6282372 | MS.gene07091:CDS | 45.0% | |
| CTTGCTTCCTGTTGAGGTAA+AGG | + | chr7.2:6283412-6283431 | MS.gene07091:CDS | 45.0% | |
| GAAGTTATCACAAGAAGCCG+TGG | + | chr7.2:6284148-6284167 | MS.gene07091:CDS | 45.0% | |
| GATGGAACATGCTCCTAAGA+TGG | - | chr7.2:6281795-6281814 | None:intergenic | 45.0% | |
| GATGGGTCCTGGTAAATAAG+AGG | - | chr7.2:6283178-6283197 | None:intergenic | 45.0% | |
| GGAAACATGACTCCAGCAAT+AGG | - | chr7.2:6283846-6283865 | None:intergenic | 45.0% | |
| GGACCTAAATGTATAAGGGC+CGG | - | chr7.2:6281413-6281432 | None:intergenic | 45.0% | |
| GGAGTGGAGCTATTGATCTT+TGG | - | chr7.2:6284199-6284218 | None:intergenic | 45.0% | |
| GTCCAAACTAGGACCATAAG+TGG | - | chr7.2:6282353-6282372 | None:intergenic | 45.0% | |
| GTGGAATCAAAGCAGGTGTA+AGG | + | chr7.2:6280786-6280805 | MS.gene07091:CDS | 45.0% | |
| TACAAGCAAGATTGGACAGG+TGG | + | chr7.2:6280767-6280786 | MS.gene07091:CDS | 45.0% | |
| TGCTAATGGGATGTTCGCTT+TGG | + | chr7.2:6282114-6282133 | MS.gene07091:CDS | 45.0% | |
| TGCTACAAGCAAGATTGGAC+AGG | + | chr7.2:6280764-6280783 | MS.gene07091:CDS | 45.0% | |
| TTTGTATGCATCGGAGACTG+CGG | - | chr7.2:6282913-6282932 | None:intergenic | 45.0% | |
| ! | ATCGACTTACTCGAGCAGAT+GGG | - | chr7.2:6283195-6283214 | None:intergenic | 45.0% |
| ! | CTTTCCCAAAACTGGTTTCC+AGG | - | chr7.2:6283566-6283585 | None:intergenic | 45.0% |
| ! | GCAGACACCTCTTATTTACC+AGG | + | chr7.2:6283168-6283187 | MS.gene07091:CDS | 45.0% |
| ! | TGCCACTTATGGTCCTAGTT+TGG | + | chr7.2:6282348-6282367 | MS.gene07091:CDS | 45.0% |
| ! | TGTTTGGAATCAGGGTTGAG+AGG | - | chr7.2:6284379-6284398 | None:intergenic | 45.0% |
| ! | TTGGGGCTACTTTGCCTTTA+TGG | + | chr7.2:6283526-6283545 | MS.gene07091:CDS | 45.0% |
| !! | AGATGACTTGCTTCCTGTTG+AGG | + | chr7.2:6283406-6283425 | MS.gene07091:CDS | 45.0% |
| !! | CTTCGTGGAGGTTTGCTAAT+GGG | + | chr7.2:6282101-6282120 | MS.gene07091:CDS | 45.0% |
| !! | TAGCCCCAAAGTACTGAAGT+TGG | - | chr7.2:6283515-6283534 | None:intergenic | 45.0% |
| !!! | CTGGAAACCAGTTTTGGGAA+AGG | + | chr7.2:6283564-6283583 | MS.gene07091:CDS | 45.0% |
| !! | TAAACATTTATATATTAAAT+TGG | - | chr7.2:6283653-6283672 | None:intergenic | 5.0% |
| AAAGCTGAGATGCCACACTG+TGG | - | chr7.2:6282677-6282696 | None:intergenic | 50.0% | |
| AACACTTGCAGTCGGCATGT+AGG | - | chr7.2:6282384-6282403 | None:intergenic | 50.0% | |
| AACCGCTTTACCCGAATTGC+GGG | + | chr7.2:6281818-6281837 | MS.gene07091:CDS | 50.0% | |
| AGCTACGAGTATGGGAAACG+TGG | + | chr7.2:6283340-6283359 | MS.gene07091:CDS | 50.0% | |
| AGGACACACCTGTCCAAACT+AGG | - | chr7.2:6282364-6282383 | None:intergenic | 50.0% | |
| AGGTGCACACCTTCAAGACT+TGG | + | chr7.2:6283923-6283942 | MS.gene07091:CDS | 50.0% | |
| ATCCAGCCCATCCAAGAAAC+AGG | - | chr7.2:6281344-6281363 | None:intergenic | 50.0% | |
| CAACCGCTTTACCCGAATTG+CGG | + | chr7.2:6281817-6281836 | MS.gene07091:CDS | 50.0% | |
| CAGCTGCATCCAAGTCTTGA+AGG | - | chr7.2:6283935-6283954 | None:intergenic | 50.0% | |
| CCATTAGCAAACCTCCACGA+AGG | - | chr7.2:6282103-6282122 | None:intergenic | 50.0% | |
| CCGACTGCAAGTGTTCCAAA+CGG | + | chr7.2:6282389-6282408 | MS.gene07091:CDS | 50.0% | |
| CGAATTGCGGGAGAGTTGTT+TGG | + | chr7.2:6281830-6281849 | MS.gene07091:CDS | 50.0% | |
| CTAGTGCTGTCACTGTCATG+TGG | + | chr7.2:6281690-6281709 | MS.gene07091:intron | 50.0% | |
| CTTGGATGCAGCTGAGTATG+AGG | + | chr7.2:6283941-6283960 | MS.gene07091:CDS | 50.0% | |
| GAAACTCATCCACAAGTCCC+TGG | - | chr7.2:6282039-6282058 | None:intergenic | 50.0% | |
| GCACACCATAGTCGGCTATA+AGG | - | chr7.2:6282331-6282350 | None:intergenic | 50.0% | |
| GCCTCTTTAGTCCAAATCCG+TGG | + | chr7.2:6282423-6282442 | MS.gene07091:CDS | 50.0% | |
| GGAGCTGGTGCTTCTCATAT+CGG | + | chr7.2:6284106-6284125 | MS.gene07091:CDS | 50.0% | |
| GGTGCTTCTCATATCGGAGA+AGG | + | chr7.2:6284112-6284131 | MS.gene07091:CDS | 50.0% | |
| GTCCAATTGTCATATGCGCC+GGG | - | chr7.2:6282452-6282471 | None:intergenic | 50.0% | |
| GTGTTCCAAACGGTATCCCA+AGG | + | chr7.2:6282399-6282418 | MS.gene07091:CDS | 50.0% | |
| TGGACAGGTGGAATCAAAGC+AGG | + | chr7.2:6280779-6280798 | MS.gene07091:CDS | 50.0% | |
| ! | AACCTGTTTCTTGGATGGGC+TGG | + | chr7.2:6281339-6281358 | MS.gene07091:CDS | 50.0% |
| ! | CAGCAATCTGAGTTTGGAGC+TGG | + | chr7.2:6284091-6284110 | MS.gene07091:intron | 50.0% |
| ! | CCGTTTGGAACACTTGCAGT+CGG | - | chr7.2:6282392-6282411 | None:intergenic | 50.0% |
| ! | GATCGACTTACTCGAGCAGA+TGG | - | chr7.2:6283196-6283215 | None:intergenic | 50.0% |
| !! | CCTTCGTGGAGGTTTGCTAA+TGG | + | chr7.2:6282100-6282119 | MS.gene07091:CDS | 50.0% |
| !! | CGACTATGGTGTGCCACTTA+TGG | + | chr7.2:6282337-6282356 | MS.gene07091:CDS | 50.0% |
| !! | CGTAGCCTTATAGCCGACTA+TGG | + | chr7.2:6282323-6282342 | MS.gene07091:CDS | 50.0% |
| !! | TCGGGTAAAGCGGTTGATGA+TGG | - | chr7.2:6281813-6281832 | None:intergenic | 50.0% |
| !! | TGTTTCTTGGATGGGCTGGA+TGG | + | chr7.2:6281343-6281362 | MS.gene07091:CDS | 50.0% |
| !! | TTGGACTAAAGAGGCGCCTT+GGG | - | chr7.2:6282418-6282437 | None:intergenic | 50.0% |
| !! | TTTGGACTAAAGAGGCGCCT+TGG | - | chr7.2:6282419-6282438 | None:intergenic | 50.0% |
| ACTGAGCAAAGTCCTCGGTC+TGG | + | chr7.2:6284292-6284311 | MS.gene07091:CDS | 55.0% | |
| ATCCACAAGTCCCTGGCACA+AGG | - | chr7.2:6282032-6282051 | None:intergenic | 55.0% | |
| CTCCCGCAATTCGGGTAAAG+CGG | - | chr7.2:6281823-6281842 | None:intergenic | 55.0% | |
| GGTATGACTCCGTTTGCAGG+AGG | - | chr7.2:6282892-6282911 | None:intergenic | 55.0% | |
| TCGCGACTGAGCAAAGTCCT+CGG | + | chr7.2:6284287-6284306 | MS.gene07091:CDS | 55.0% | |
| TGCGGTATGACTCCGTTTGC+AGG | - | chr7.2:6282895-6282914 | None:intergenic | 55.0% | |
| TTACTCGAGCAGATGGGTCC+TGG | - | chr7.2:6283189-6283208 | None:intergenic | 55.0% | |
| AGGCGCCTTGGGATACCGTT+TGG | - | chr7.2:6282407-6282426 | None:intergenic | 60.0% | |
| AGTCCAAATCCGTGGTCGCC+CGG | + | chr7.2:6282431-6282450 | MS.gene07091:CDS | 60.0% | |
| AGTCCTCGGTCTGGCGTAAG+AGG | + | chr7.2:6284301-6284320 | MS.gene07091:CDS | 60.0% | |
| CGCCCGGCGCATATGACAAT+TGG | + | chr7.2:6282447-6282466 | MS.gene07091:CDS | 60.0% | |
| GTCCTTGTGCCAGGGACTTG+TGG | + | chr7.2:6282027-6282046 | MS.gene07091:intron | 60.0% | |
| TATGGGAAACGTGGACGCCC+CGG | + | chr7.2:6283349-6283368 | MS.gene07091:CDS | 60.0% | |
| ! | AAGAGAGGTGCGGGCTCAGA+CGG | - | chr7.2:6284246-6284265 | None:intergenic | 60.0% |
| ! | TGCGGGCTCAGACGGCTTTT+AGG | - | chr7.2:6284238-6284257 | None:intergenic | 60.0% |
| GTGCCTCTTACGCCAGACCG+AGG | - | chr7.2:6284307-6284326 | None:intergenic | 65.0% | |
| TCATATGCGCCGGGCGACCA+CGG | - | chr7.2:6282443-6282462 | None:intergenic | 65.0% | |
| GCGCCGGGCGACCACGGATT+TGG | - | chr7.2:6282437-6282456 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 6280704 | 6284414 | 6280704 | ID=MS.gene07091 |
| chr7.2 | mRNA | 6280704 | 6284414 | 6280704 | ID=MS.gene07091.t1;Parent=MS.gene07091 |
| chr7.2 | exon | 6280704 | 6280807 | 6280704 | ID=MS.gene07091.t1.exon1;Parent=MS.gene07091.t1 |
| chr7.2 | CDS | 6280704 | 6280807 | 6280704 | ID=cds.MS.gene07091.t1;Parent=MS.gene07091.t1 |
| chr7.2 | exon | 6280962 | 6281044 | 6280962 | ID=MS.gene07091.t1.exon2;Parent=MS.gene07091.t1 |
| chr7.2 | CDS | 6280962 | 6281044 | 6280962 | ID=cds.MS.gene07091.t1;Parent=MS.gene07091.t1 |
| chr7.2 | exon | 6281172 | 6281364 | 6281172 | ID=MS.gene07091.t1.exon3;Parent=MS.gene07091.t1 |
| chr7.2 | CDS | 6281172 | 6281364 | 6281172 | ID=cds.MS.gene07091.t1;Parent=MS.gene07091.t1 |
| chr7.2 | exon | 6281754 | 6281892 | 6281754 | ID=MS.gene07091.t1.exon4;Parent=MS.gene07091.t1 |
| chr7.2 | CDS | 6281754 | 6281892 | 6281754 | ID=cds.MS.gene07091.t1;Parent=MS.gene07091.t1 |
| chr7.2 | exon | 6282040 | 6282205 | 6282040 | ID=MS.gene07091.t1.exon5;Parent=MS.gene07091.t1 |
| chr7.2 | CDS | 6282040 | 6282205 | 6282040 | ID=cds.MS.gene07091.t1;Parent=MS.gene07091.t1 |
| chr7.2 | exon | 6282315 | 6282481 | 6282315 | ID=MS.gene07091.t1.exon6;Parent=MS.gene07091.t1 |
| chr7.2 | CDS | 6282315 | 6282481 | 6282315 | ID=cds.MS.gene07091.t1;Parent=MS.gene07091.t1 |
| chr7.2 | exon | 6282594 | 6282767 | 6282594 | ID=MS.gene07091.t1.exon7;Parent=MS.gene07091.t1 |
| chr7.2 | CDS | 6282594 | 6282767 | 6282594 | ID=cds.MS.gene07091.t1;Parent=MS.gene07091.t1 |
| chr7.2 | exon | 6282862 | 6282957 | 6282862 | ID=MS.gene07091.t1.exon8;Parent=MS.gene07091.t1 |
| chr7.2 | CDS | 6282862 | 6282957 | 6282862 | ID=cds.MS.gene07091.t1;Parent=MS.gene07091.t1 |
| chr7.2 | exon | 6283067 | 6283204 | 6283067 | ID=MS.gene07091.t1.exon9;Parent=MS.gene07091.t1 |
| chr7.2 | CDS | 6283067 | 6283204 | 6283067 | ID=cds.MS.gene07091.t1;Parent=MS.gene07091.t1 |
| chr7.2 | exon | 6283299 | 6283624 | 6283299 | ID=MS.gene07091.t1.exon10;Parent=MS.gene07091.t1 |
| chr7.2 | CDS | 6283299 | 6283624 | 6283299 | ID=cds.MS.gene07091.t1;Parent=MS.gene07091.t1 |
| chr7.2 | exon | 6283728 | 6283995 | 6283728 | ID=MS.gene07091.t1.exon11;Parent=MS.gene07091.t1 |
| chr7.2 | CDS | 6283728 | 6283995 | 6283728 | ID=cds.MS.gene07091.t1;Parent=MS.gene07091.t1 |
| chr7.2 | exon | 6284103 | 6284414 | 6284103 | ID=MS.gene07091.t1.exon12;Parent=MS.gene07091.t1 |
| chr7.2 | CDS | 6284103 | 6284414 | 6284103 | ID=cds.MS.gene07091.t1;Parent=MS.gene07091.t1 |
| Gene Sequence |
| Protein sequence |
