Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071058.t1 | RHN46399.1 | 58.8 | 473 | 77 | 5 | 8 | 362 | 4 | 476 | 2.10E-129 | 472.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071058.t1 | A0A396GZ69 | 58.8 | 473 | 77 | 5 | 8 | 362 | 4 | 476 | 1.5e-129 | 472.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049968 | MS.gene071058 | 0.808592 | 2.87E-50 | -1.69E-46 |
| MS.gene052447 | MS.gene071058 | 0.825084 | 5.68E-54 | -1.69E-46 |
| MS.gene053974 | MS.gene071058 | 0.807065 | 6.06E-50 | -1.69E-46 |
| MS.gene054174 | MS.gene071058 | 0.802902 | 4.50E-49 | -1.69E-46 |
| MS.gene054175 | MS.gene071058 | 0.80892 | 2.44E-50 | -1.69E-46 |
| MS.gene05531 | MS.gene071058 | 0.810296 | 1.24E-50 | -1.69E-46 |
| MS.gene059458 | MS.gene071058 | 0.8246 | 7.39E-54 | -1.69E-46 |
| MS.gene059459 | MS.gene071058 | 0.803057 | 4.18E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071058.t1 | MTR_7g067300 | 61.587 | 479 | 63 | 5 | 5 | 362 | 1 | 479 | 0.0 | 526 |
| MS.gene071058.t1 | MTR_7g067600 | 50.000 | 278 | 103 | 7 | 109 | 362 | 259 | 524 | 1.21e-70 | 229 |
| MS.gene071058.t1 | MTR_7g067600 | 50.893 | 112 | 52 | 2 | 1 | 110 | 1 | 111 | 4.34e-24 | 103 |
| MS.gene071058.t1 | MTR_7g067660 | 39.018 | 387 | 170 | 16 | 24 | 362 | 14 | 382 | 1.42e-63 | 207 |
| MS.gene071058.t1 | MTR_7g067940 | 52.511 | 219 | 64 | 4 | 178 | 362 | 327 | 539 | 7.54e-62 | 207 |
| MS.gene071058.t1 | MTR_7g067940 | 50.000 | 104 | 43 | 3 | 7 | 109 | 9 | 104 | 1.64e-20 | 93.2 |
| MS.gene071058.t1 | MTR_7g068070 | 38.188 | 309 | 104 | 7 | 132 | 358 | 238 | 541 | 9.55e-54 | 186 |
| MS.gene071058.t1 | MTR_7g068070 | 49.038 | 104 | 48 | 2 | 7 | 109 | 9 | 108 | 2.44e-22 | 98.6 |
| MS.gene071058.t1 | MTR_7g068160 | 48.077 | 208 | 75 | 4 | 186 | 362 | 332 | 537 | 1.88e-53 | 185 |
| MS.gene071058.t1 | MTR_7g068160 | 51.376 | 109 | 49 | 3 | 3 | 109 | 12 | 118 | 8.69e-20 | 90.9 |
| MS.gene071058.t1 | MTR_7g067750 | 46.411 | 209 | 80 | 4 | 184 | 362 | 343 | 549 | 1.41e-48 | 172 |
| MS.gene071058.t1 | MTR_7g067750 | 51.724 | 87 | 37 | 2 | 24 | 109 | 61 | 143 | 2.08e-17 | 84.0 |
| MS.gene071058.t1 | MTR_7g067970 | 50.000 | 188 | 69 | 4 | 198 | 362 | 353 | 538 | 1.97e-47 | 169 |
| MS.gene071058.t1 | MTR_7g067970 | 46.154 | 104 | 51 | 2 | 7 | 109 | 9 | 108 | 2.36e-18 | 86.7 |
| MS.gene071058.t1 | MTR_7g067990 | 47.980 | 198 | 74 | 5 | 190 | 362 | 404 | 597 | 1.32e-46 | 167 |
| MS.gene071058.t1 | MTR_7g067990 | 44.954 | 109 | 56 | 3 | 5 | 111 | 2 | 108 | 1.21e-15 | 78.6 |
| MS.gene071058.t1 | MTR_7g067880 | 48.066 | 181 | 61 | 4 | 199 | 348 | 333 | 511 | 3.92e-43 | 157 |
| MS.gene071058.t1 | MTR_7g067880 | 42.391 | 92 | 49 | 2 | 19 | 109 | 22 | 110 | 2.80e-12 | 68.2 |
| MS.gene071058.t1 | MTR_7g068150 | 42.079 | 202 | 87 | 4 | 7 | 179 | 5 | 205 | 4.49e-33 | 129 |
| MS.gene071058.t1 | MTR_7g068150 | 50.725 | 69 | 19 | 1 | 160 | 228 | 271 | 324 | 5.86e-13 | 70.1 |
| MS.gene071058.t1 | MTR_3g466740 | 37.173 | 191 | 84 | 6 | 203 | 362 | 289 | 474 | 6.78e-26 | 108 |
| MS.gene071058.t1 | MTR_3g466740 | 41.860 | 86 | 43 | 2 | 24 | 109 | 28 | 106 | 2.20e-13 | 71.6 |
| MS.gene071058.t1 | MTR_0067s0010 | 34.804 | 204 | 94 | 8 | 186 | 361 | 288 | 480 | 1.55e-21 | 95.9 |
| MS.gene071058.t1 | MTR_0067s0010 | 44.186 | 86 | 41 | 2 | 24 | 109 | 41 | 119 | 8.58e-14 | 72.8 |
| MS.gene071058.t1 | MTR_7g068040 | 55.814 | 86 | 36 | 1 | 24 | 109 | 15 | 98 | 5.69e-19 | 83.6 |
| MS.gene071058.t1 | MTR_7g068030 | 44.554 | 101 | 25 | 1 | 188 | 257 | 31 | 131 | 1.53e-16 | 76.3 |
| MS.gene071058.t1 | MTR_4g015410 | 28.352 | 261 | 133 | 12 | 128 | 354 | 129 | 369 | 5.69e-16 | 79.0 |
| MS.gene071058.t1 | MTR_1g040690 | 31.551 | 187 | 94 | 7 | 203 | 358 | 292 | 475 | 9.74e-16 | 78.6 |
| MS.gene071058.t1 | MTR_4g015450 | 26.394 | 269 | 139 | 9 | 135 | 354 | 212 | 470 | 3.79e-14 | 73.9 |
| MS.gene071058.t1 | MTR_1g038270 | 34.454 | 119 | 62 | 5 | 203 | 308 | 333 | 448 | 9.92e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 72 sgRNAs with CRISPR-Local
Find 93 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCAATGGAGATGAATTATT+TGG | 0.119874 | 7.3:+37646760 | None:intergenic |
| GAATTATTTGGGAAAATTAT+AGG | 0.265697 | 7.3:+37646772 | None:intergenic |
| AAAGCATTTGGATTTGGATT+TGG | 0.305274 | 7.3:-37647293 | MS.gene071058:intron |
| TGTTTCAATATAATGCAAAT+AGG | 0.320897 | 7.3:+37647822 | None:intergenic |
| GTCATACATGGCTTCATTCA+TGG | 0.340896 | 7.3:+37648079 | None:intergenic |
| GAATGGAAAGCATTTGGATT+TGG | 0.342460 | 7.3:-37647299 | MS.gene071058:intron |
| TGATGTCTTCCATGAGCAAT+AGG | 0.352008 | 7.3:+37647898 | None:intergenic |
| GACCATGAAGTAGTTGATTC+CGG | 0.380475 | 7.3:-37646992 | MS.gene071058:CDS |
| TTTAAATTCAAGTTTGAAAA+GGG | 0.385021 | 7.3:-37647232 | MS.gene071058:CDS |
| AGGTGATGTTCAACTTCTTA+AGG | 0.388288 | 7.3:-37647095 | MS.gene071058:CDS |
| AGAATTTCTTTATAGTGATC+AGG | 0.388324 | 7.3:-37647709 | MS.gene071058:CDS |
| CTCCAGTAAAATCAACGAAA+TGG | 0.402225 | 7.3:-37647796 | MS.gene071058:CDS |
| TTTAGTATTCGAGGAAGTTA+CGG | 0.407480 | 7.3:-37647771 | MS.gene071058:CDS |
| GCAATGGAGATGAATTATTT+GGG | 0.409897 | 7.3:+37646761 | None:intergenic |
| CTTTAAATTCAAGTTTGAAA+AGG | 0.409991 | 7.3:-37647233 | MS.gene071058:CDS |
| GTACCTTTAGTGGTCTGAAC+TGG | 0.411308 | 7.3:+37647627 | None:intergenic |
| AAGAAGGTTAGTACCTTTAG+TGG | 0.411360 | 7.3:+37647617 | None:intergenic |
| GATGAGCAACCAAAAGTTGA+TGG | 0.423093 | 7.3:-37647044 | MS.gene071058:CDS |
| AATCTTGTCCCGTCACTGTT+AGG | 0.423270 | 7.3:-37647666 | MS.gene071058:CDS |
| TTGTCCACTTATTCGTCAAC+GGG | 0.425147 | 7.3:-37647590 | MS.gene071058:CDS |
| TACCGGAATCAACTACTTCA+TGG | 0.430829 | 7.3:+37646990 | None:intergenic |
| TTAGTATTCGAGGAAGTTAC+GGG | 0.431341 | 7.3:-37647770 | MS.gene071058:CDS |
| TTCCGGTAGTTATATTCAAA+TGG | 0.442043 | 7.3:-37646975 | MS.gene071058:CDS |
| CTTTCCCGTTGACGAATAAG+TGG | 0.442597 | 7.3:+37647586 | None:intergenic |
| TTTAAGTCTTTCTGGAACAA+TGG | 0.453973 | 7.3:+37647992 | None:intergenic |
| ATTTGGGAAAATTATAGGCT+AGG | 0.460869 | 7.3:+37646777 | None:intergenic |
| TGTTCTGTCGTATCGTTTCA+AGG | 0.464852 | 7.3:-37647734 | MS.gene071058:CDS |
| ACAAAAGCAAAGTGGGGCTC+TGG | 0.465724 | 7.3:-37647172 | MS.gene071058:CDS |
| TCATTCACATACCGTCATCA+TGG | 0.481271 | 7.3:-37646887 | MS.gene071058:CDS |
| GGTCCGATGGACACCACTCT+TGG | 0.484493 | 7.3:+37647945 | None:intergenic |
| GTCCATCGGACCACGATTCA+AGG | 0.484857 | 7.3:-37647934 | MS.gene071058:CDS |
| AGAGGTGAAATTGAAAGGTA+TGG | 0.488357 | 7.3:-37647257 | MS.gene071058:CDS |
| CACTTATTCGTCAACGGGAA+AGG | 0.490744 | 7.3:-37647585 | MS.gene071058:CDS |
| TTTCAACGGTCTGATCTGTT+CGG | 0.501502 | 7.3:-37647119 | MS.gene071058:CDS |
| TAAGGACAAGAAAATTGTTG+TGG | 0.511678 | 7.3:-37647077 | MS.gene071058:CDS |
| TCCCTTGAATCGTGGTCCGA+TGG | 0.514498 | 7.3:+37647932 | None:intergenic |
| GAGAGAAGACCTATTGCTCA+TGG | 0.521887 | 7.3:-37647907 | MS.gene071058:CDS |
| CAATTACAACGTCGTTGCAA+CGG | 0.525056 | 7.3:-37646840 | MS.gene071058:CDS |
| TCTGAAGAGGTGAAATTGAA+AGG | 0.526110 | 7.3:-37647262 | MS.gene071058:CDS |
| TTAAATTCAAGTTTGAAAAG+GGG | 0.529042 | 7.3:-37647231 | MS.gene071058:CDS |
| TTTGGATCATATTTCTGAAG+AGG | 0.531811 | 7.3:-37647275 | MS.gene071058:CDS |
| GAAATGGAATTTAGTATTCG+AGG | 0.532224 | 7.3:-37647780 | MS.gene071058:CDS |
| TCTTTATAGTGATCAGGAGC+GGG | 0.532901 | 7.3:-37647703 | MS.gene071058:CDS |
| TGGCGGCTGCAAATTCACTT+TGG | 0.534207 | 7.3:-37647152 | MS.gene071058:CDS |
| GACCATTTGAATATAACTAC+CGG | 0.539799 | 7.3:+37646973 | None:intergenic |
| TAAATTCAAGTTTGAAAAGG+GGG | 0.540957 | 7.3:-37647230 | MS.gene071058:CDS |
| ATTGTCCACTTATTCGTCAA+CGG | 0.549385 | 7.3:-37647591 | MS.gene071058:CDS |
| GGTCCAGTTCAGACCACTAA+AGG | 0.553027 | 7.3:-37647630 | MS.gene071058:CDS |
| ATCTTCTTCCTTCTCAACAC+GGG | 0.562374 | 7.3:+37647551 | None:intergenic |
| CATTCACATACCGTCATCAT+GGG | 0.565017 | 7.3:-37646886 | MS.gene071058:CDS |
| GAGTACTGCCCGTGTTGAGA+AGG | 0.567080 | 7.3:-37647559 | MS.gene071058:CDS |
| TGAACGACACCAGTCATACA+TGG | 0.572316 | 7.3:+37648067 | None:intergenic |
| TTGCAACGACGTTGTAATTG+CGG | 0.574657 | 7.3:+37646843 | None:intergenic |
| AACGGTCTGATCTGTTCGGA+AGG | 0.577746 | 7.3:-37647115 | MS.gene071058:CDS |
| GTTCTGTCGTATCGTTTCAA+GGG | 0.579709 | 7.3:-37647733 | MS.gene071058:CDS |
| TGAATGAAGCCATGTATGAC+TGG | 0.580228 | 7.3:-37648076 | MS.gene071058:CDS |
| GAGAGTAGCCTAACAGTGAC+GGG | 0.580790 | 7.3:+37647658 | None:intergenic |
| TCGGACCACGATTCAAGGGA+AGG | 0.594029 | 7.3:-37647929 | MS.gene071058:CDS |
| ATGCCAAGAGTGGTGTCCAT+CGG | 0.595264 | 7.3:-37647948 | MS.gene071058:CDS |
| TCTCTCCTTCCCTTGAATCG+TGG | 0.595677 | 7.3:+37647924 | None:intergenic |
| TGAGAGTAGCCTAACAGTGA+CGG | 0.600866 | 7.3:+37647657 | None:intergenic |
| TCCATCGGACCACGATTCAA+GGG | 0.600976 | 7.3:-37647933 | MS.gene071058:CDS |
| TTCTTTATAGTGATCAGGAG+CGG | 0.601392 | 7.3:-37647704 | MS.gene071058:CDS |
| GATCTTCTTCCTTCTCAACA+CGG | 0.608575 | 7.3:+37647550 | None:intergenic |
| ATAAGTGGACAATATCAAGA+AGG | 0.615034 | 7.3:+37647601 | None:intergenic |
| AAAGCAAAGTGGGGCTCTGG+CGG | 0.636144 | 7.3:-37647169 | MS.gene071058:CDS |
| TCACATACCGTCATCATGGG+TGG | 0.645091 | 7.3:-37646883 | MS.gene071058:CDS |
| TTAACAGCCACCCATGATGA+CGG | 0.648634 | 7.3:+37646876 | None:intergenic |
| CTGTTAGGCTACTCTCACGA+CGG | 0.651252 | 7.3:-37647651 | MS.gene071058:CDS |
| CAACTCCAAATGCTATTGCG+CGG | 0.656272 | 7.3:+37647014 | None:intergenic |
| AGATGCATACATGCCAAGAG+TGG | 0.657442 | 7.3:-37647958 | MS.gene071058:CDS |
| AAAACAACAAAAGCAAAGTG+GGG | 0.712817 | 7.3:-37647178 | MS.gene071058:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTCTTTTATG+TGG | - | chr7.3:37647483-37647502 | MS.gene071058:intron | 10.0% |
| !!! | TTTAAATTCAAGTTTGAAAA+GGG | - | chr7.3:37647620-37647639 | MS.gene071058:CDS | 15.0% |
| !! | AGAAAGACTTAAAAAATCAA+AGG | - | chr7.3:37646870-37646889 | MS.gene071058:CDS | 20.0% |
| !! | TGTTTCAATATAATGCAAAT+AGG | + | chr7.3:37647033-37647052 | None:intergenic | 20.0% |
| !!! | CTTTAAATTCAAGTTTGAAA+AGG | - | chr7.3:37647619-37647638 | MS.gene071058:CDS | 20.0% |
| !!! | TTAAATTCAAGTTTGAAAAG+GGG | - | chr7.3:37647621-37647640 | MS.gene071058:CDS | 20.0% |
| !!! | TTTGATTTTTTAAGTCTTTC+TGG | + | chr7.3:37646871-37646890 | None:intergenic | 20.0% |
| ! | AAAAACAACAAAAGCAAAGT+GGG | - | chr7.3:37647673-37647692 | MS.gene071058:CDS | 25.0% |
| ! | AGAATTTCTTTATAGTGATC+AGG | - | chr7.3:37647143-37647162 | MS.gene071058:CDS | 25.0% |
| !! | AAGTACTACATTTATCCTTT+TGG | + | chr7.3:37647437-37647456 | None:intergenic | 25.0% |
| !! | TAAATTCAAGTTTGAAAAGG+GGG | - | chr7.3:37647622-37647641 | MS.gene071058:CDS | 25.0% |
| !! | TATTTTTCATGAAACGAATC+TGG | - | chr7.3:37647927-37647946 | MS.gene071058:CDS | 25.0% |
| AAAACAACAAAAGCAAAGTG+GGG | - | chr7.3:37647674-37647693 | MS.gene071058:CDS | 30.0% | |
| ATAAGTGGACAATATCAAGA+AGG | + | chr7.3:37647254-37647273 | None:intergenic | 30.0% | |
| ATTTGGGAAAATTATAGGCT+AGG | + | chr7.3:37648078-37648097 | None:intergenic | 30.0% | |
| CAAAAACAACAAAAGCAAAG+TGG | - | chr7.3:37647672-37647691 | MS.gene071058:CDS | 30.0% | |
| GAAATGGAATTTAGTATTCG+AGG | - | chr7.3:37647072-37647091 | MS.gene071058:CDS | 30.0% | |
| GACCATTTGAATATAACTAC+CGG | + | chr7.3:37647882-37647901 | None:intergenic | 30.0% | |
| TAAGGACAAGAAAATTGTTG+TGG | - | chr7.3:37647775-37647794 | MS.gene071058:CDS | 30.0% | |
| TGTAGTACTTCTGTTAAGTT+TGG | - | chr7.3:37647447-37647466 | MS.gene071058:intron | 30.0% | |
| TTATTGATACTACTCAGTCT+CGG | - | chr7.3:37647340-37647359 | MS.gene071058:intron | 30.0% | |
| TTCCGGTAGTTATATTCAAA+TGG | - | chr7.3:37647877-37647896 | MS.gene071058:CDS | 30.0% | |
| TTTAGTATTCGAGGAAGTTA+CGG | - | chr7.3:37647081-37647100 | MS.gene071058:CDS | 30.0% | |
| TTTATGTGGAAGAGTTTATG+TGG | - | chr7.3:37647497-37647516 | MS.gene071058:intron | 30.0% | |
| ! | AAAGCATTTGGATTTGGATT+TGG | - | chr7.3:37647559-37647578 | MS.gene071058:CDS | 30.0% |
| ! | TACTACATTTATCCTTTTGG+AGG | + | chr7.3:37647434-37647453 | None:intergenic | 30.0% |
| ! | TTTGGATCATATTTCTGAAG+AGG | - | chr7.3:37647577-37647596 | MS.gene071058:CDS | 30.0% |
| !! | TTTAAGTCTTTCTGGAACAA+TGG | + | chr7.3:37646863-37646882 | None:intergenic | 30.0% |
| !!! | TTCCATTTCGTTGATTTTAC+TGG | + | chr7.3:37647061-37647080 | None:intergenic | 30.0% |
| AAGAAGGTTAGTACCTTTAG+TGG | + | chr7.3:37647238-37647257 | None:intergenic | 35.0% | |
| AATGCTTTCCATTCACACAA+AGG | + | chr7.3:37647547-37647566 | None:intergenic | 35.0% | |
| AGAGGTGAAATTGAAAGGTA+TGG | - | chr7.3:37647595-37647614 | MS.gene071058:CDS | 35.0% | |
| AGGTGATGTTCAACTTCTTA+AGG | - | chr7.3:37647757-37647776 | MS.gene071058:CDS | 35.0% | |
| ATTGTCCACTTATTCGTCAA+CGG | - | chr7.3:37647261-37647280 | MS.gene071058:CDS | 35.0% | |
| CTCCAGTAAAATCAACGAAA+TGG | - | chr7.3:37647056-37647075 | MS.gene071058:CDS | 35.0% | |
| CTTAAAACCAAACCTCCAAA+AGG | - | chr7.3:37647419-37647438 | MS.gene071058:intron | 35.0% | |
| GGAAATATCCTTTGTGTGAA+TGG | - | chr7.3:37647536-37647555 | MS.gene071058:intron | 35.0% | |
| TCTGAAGAGGTGAAATTGAA+AGG | - | chr7.3:37647590-37647609 | MS.gene071058:CDS | 35.0% | |
| TTAGTATTCGAGGAAGTTAC+GGG | - | chr7.3:37647082-37647101 | MS.gene071058:CDS | 35.0% | |
| TTCTTTATAGTGATCAGGAG+CGG | - | chr7.3:37647148-37647167 | MS.gene071058:CDS | 35.0% | |
| ! | GGAAAAACTCCATCAACTTT+TGG | + | chr7.3:37647820-37647839 | None:intergenic | 35.0% |
| ! | TGTGGTCTGTTATTTATGCT+TGG | - | chr7.3:37647515-37647534 | MS.gene071058:intron | 35.0% |
| !! | CATTTATCCTTTTGGAGGTT+TGG | + | chr7.3:37647429-37647448 | None:intergenic | 35.0% |
| !! | GAATGGAAAGCATTTGGATT+TGG | - | chr7.3:37647553-37647572 | MS.gene071058:CDS | 35.0% |
| !! | TTGGCTGCTTTGATTTTCAA+CGG | - | chr7.3:37647719-37647738 | MS.gene071058:CDS | 35.0% |
| !! | TTGTGTGAATGGAAAGCATT+TGG | - | chr7.3:37647547-37647566 | MS.gene071058:intron | 35.0% |
| !!! | CTTTTGGAGGTTTGGTTTTA+AGG | + | chr7.3:37647421-37647440 | None:intergenic | 35.0% |
| ATCTTCTTCCTTCTCAACAC+GGG | + | chr7.3:37647304-37647323 | None:intergenic | 40.0% | |
| CAATTACAACGTCGTTGCAA+CGG | - | chr7.3:37648012-37648031 | MS.gene071058:CDS | 40.0% | |
| CATTCACATACCGTCATCAT+GGG | - | chr7.3:37647966-37647985 | MS.gene071058:CDS | 40.0% | |
| GATCTTCTTCCTTCTCAACA+CGG | + | chr7.3:37647305-37647324 | None:intergenic | 40.0% | |
| GATGAGCAACCAAAAGTTGA+TGG | - | chr7.3:37647808-37647827 | MS.gene071058:CDS | 40.0% | |
| GTTCTGTCGTATCGTTTCAA+GGG | - | chr7.3:37647119-37647138 | MS.gene071058:CDS | 40.0% | |
| TACCGGAATCAACTACTTCA+TGG | + | chr7.3:37647865-37647884 | None:intergenic | 40.0% | |
| TCATTCACATACCGTCATCA+TGG | - | chr7.3:37647965-37647984 | MS.gene071058:CDS | 40.0% | |
| TCTTTATAGTGATCAGGAGC+GGG | - | chr7.3:37647149-37647168 | MS.gene071058:CDS | 40.0% | |
| TGAATGAAGCCATGTATGAC+TGG | - | chr7.3:37646776-37646795 | MS.gene071058:CDS | 40.0% | |
| TGATGTCTTCCATGAGCAAT+AGG | + | chr7.3:37646957-37646976 | None:intergenic | 40.0% | |
| TGTTCTGTCGTATCGTTTCA+AGG | - | chr7.3:37647118-37647137 | MS.gene071058:CDS | 40.0% | |
| TTGCAACGACGTTGTAATTG+CGG | + | chr7.3:37648012-37648031 | None:intergenic | 40.0% | |
| TTGTCCACTTATTCGTCAAC+GGG | - | chr7.3:37647262-37647281 | MS.gene071058:CDS | 40.0% | |
| TTTCAACGGTCTGATCTGTT+CGG | - | chr7.3:37647733-37647752 | MS.gene071058:CDS | 40.0% | |
| ! | GACCATGAAGTAGTTGATTC+CGG | - | chr7.3:37647860-37647879 | MS.gene071058:CDS | 40.0% |
| ! | TTTTTCCGCGCAATAGCATT+TGG | - | chr7.3:37647833-37647852 | MS.gene071058:CDS | 40.0% |
| AATCTTGTCCCGTCACTGTT+AGG | - | chr7.3:37647186-37647205 | MS.gene071058:CDS | 45.0% | |
| AGATGCATACATGCCAAGAG+TGG | - | chr7.3:37646894-37646913 | MS.gene071058:CDS | 45.0% | |
| CAACTCCAAATGCTATTGCG+CGG | + | chr7.3:37647841-37647860 | None:intergenic | 45.0% | |
| CACTTATTCGTCAACGGGAA+AGG | - | chr7.3:37647267-37647286 | MS.gene071058:CDS | 45.0% | |
| CTTTCCCGTTGACGAATAAG+TGG | + | chr7.3:37647269-37647288 | None:intergenic | 45.0% | |
| GAGAGAAGACCTATTGCTCA+TGG | - | chr7.3:37646945-37646964 | MS.gene071058:CDS | 45.0% | |
| GTACCTTTAGTGGTCTGAAC+TGG | + | chr7.3:37647228-37647247 | None:intergenic | 45.0% | |
| TGAACGACACCAGTCATACA+TGG | + | chr7.3:37646788-37646807 | None:intergenic | 45.0% | |
| TGAGAGTAGCCTAACAGTGA+CGG | + | chr7.3:37647198-37647217 | None:intergenic | 45.0% | |
| TTAACAGCCACCCATGATGA+CGG | + | chr7.3:37647979-37647998 | None:intergenic | 45.0% | |
| TTAAGGCAACTCCTGCAGTT+AGG | + | chr7.3:37647404-37647423 | None:intergenic | 45.0% | |
| AACGGTCTGATCTGTTCGGA+AGG | - | chr7.3:37647737-37647756 | MS.gene071058:CDS | 50.0% | |
| ACAAAAGCAAAGTGGGGCTC+TGG | - | chr7.3:37647680-37647699 | MS.gene071058:CDS | 50.0% | |
| ATGCCAAGAGTGGTGTCCAT+CGG | - | chr7.3:37646904-37646923 | MS.gene071058:CDS | 50.0% | |
| CTGTTAGGCTACTCTCACGA+CGG | - | chr7.3:37647201-37647220 | MS.gene071058:CDS | 50.0% | |
| GAGAGTAGCCTAACAGTGAC+GGG | + | chr7.3:37647197-37647216 | None:intergenic | 50.0% | |
| GGAAGAAGATCACGTCGTGT+TGG | - | chr7.3:37647314-37647333 | MS.gene071058:intron | 50.0% | |
| GGTCCAGTTCAGACCACTAA+AGG | - | chr7.3:37647222-37647241 | MS.gene071058:CDS | 50.0% | |
| TCACATACCGTCATCATGGG+TGG | - | chr7.3:37647969-37647988 | MS.gene071058:CDS | 50.0% | |
| TCCATCGGACCACGATTCAA+GGG | - | chr7.3:37646919-37646938 | MS.gene071058:CDS | 50.0% | |
| TCTCTCCTTCCCTTGAATCG+TGG | + | chr7.3:37646931-37646950 | None:intergenic | 50.0% | |
| TGGCGGCTGCAAATTCACTT+TGG | - | chr7.3:37647700-37647719 | MS.gene071058:CDS | 50.0% | |
| GTCCATCGGACCACGATTCA+AGG | - | chr7.3:37646918-37646937 | MS.gene071058:CDS | 55.0% | |
| TCCCTTGAATCGTGGTCCGA+TGG | + | chr7.3:37646923-37646942 | None:intergenic | 55.0% | |
| TCGGACCACGATTCAAGGGA+AGG | - | chr7.3:37646923-37646942 | MS.gene071058:CDS | 55.0% | |
| ! | AAAGCAAAGTGGGGCTCTGG+CGG | - | chr7.3:37647683-37647702 | MS.gene071058:CDS | 55.0% |
| ! | GAGTACTGCCCGTGTTGAGA+AGG | - | chr7.3:37647293-37647312 | MS.gene071058:intron | 55.0% |
| !! | GCTCTGAGACTCCTAACTGC+AGG | - | chr7.3:37647390-37647409 | MS.gene071058:intron | 55.0% |
| GGTCCGATGGACACCACTCT+TGG | + | chr7.3:37646910-37646929 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.3 | gene | 37646775 | 37648099 | 37646775 | ID=MS.gene071058 |
| chr7.3 | mRNA | 37646775 | 37648099 | 37646775 | ID=MS.gene071058.t1;Parent=MS.gene071058 |
| chr7.3 | exon | 37647548 | 37648099 | 37647548 | ID=MS.gene071058.t1.exon1;Parent=MS.gene071058.t1 |
| chr7.3 | CDS | 37647548 | 37648099 | 37647548 | ID=cds.MS.gene071058.t1;Parent=MS.gene071058.t1 |
| chr7.3 | exon | 37646775 | 37647311 | 37646775 | ID=MS.gene071058.t1.exon2;Parent=MS.gene071058.t1 |
| chr7.3 | CDS | 37646775 | 37647311 | 37646775 | ID=cds.MS.gene071058.t1;Parent=MS.gene071058.t1 |
| Gene Sequence |
| Protein sequence |
