Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071487.t1 | XP_003593617.1 | 90.2 | 143 | 12 | 1 | 5 | 145 | 1 | 143 | 5.80E-54 | 220.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071487.t1 | Q38741 | 55.3 | 141 | 53 | 2 | 5 | 145 | 1 | 131 | 5.7e-34 | 145.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene071487.t1 | G7ISD5 | 90.2 | 143 | 12 | 1 | 5 | 145 | 1 | 143 | 4.2e-54 | 220.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050438 | MS.gene071487 | 0.817806 | 2.72E-52 | -1.69E-46 |
| MS.gene050719 | MS.gene071487 | 0.807654 | 4.55E-50 | -1.69E-46 |
| MS.gene050721 | MS.gene071487 | 0.805781 | 1.13E-49 | -1.69E-46 |
| MS.gene050724 | MS.gene071487 | 0.805143 | 1.54E-49 | -1.69E-46 |
| MS.gene051860 | MS.gene071487 | 0.813548 | 2.42E-51 | -1.69E-46 |
| MS.gene053074 | MS.gene071487 | 0.81301 | 3.18E-51 | -1.69E-46 |
| MS.gene054183 | MS.gene071487 | 0.802179 | 6.34E-49 | -1.69E-46 |
| MS.gene054184 | MS.gene071487 | 0.808921 | 2.44E-50 | -1.69E-46 |
| MS.gene054185 | MS.gene071487 | 0.802353 | 5.84E-49 | -1.69E-46 |
| MS.gene055356 | MS.gene071487 | 0.806017 | 1.01E-49 | -1.69E-46 |
| MS.gene055358 | MS.gene071487 | 0.835073 | 2.07E-56 | -1.69E-46 |
| MS.gene058139 | MS.gene071487 | 0.802589 | 5.22E-49 | -1.69E-46 |
| MS.gene058168 | MS.gene071487 | 0.822302 | 2.55E-53 | -1.69E-46 |
| MS.gene059609 | MS.gene071487 | 0.815533 | 8.80E-52 | -1.69E-46 |
| MS.gene060803 | MS.gene071487 | 0.800117 | 1.68E-48 | -1.69E-46 |
| MS.gene061114 | MS.gene071487 | -0.809625 | 1.72E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 35 sgRNAs with CRISPR-Local
Find 132 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCAGATTTACCTTTACTTA+TGG | 0.220696 | 2.4:-70686466 | None:intergenic |
| CACAAACCTTATGGCGCTTA+TGG | 0.248219 | 2.4:+70686217 | None:intergenic |
| AATGGTATTCACAAACCTTA+TGG | 0.308780 | 2.4:+70686208 | None:intergenic |
| TTTACTTATGGATGGAAGTT+GGG | 0.337434 | 2.4:-70686454 | MS.gene071487:CDS |
| ATGACTTGAAAAGGAGTTGT+AGG | 0.355530 | 2.4:-70684401 | MS.gene071487:CDS |
| GGTTTGTGAATACCATTCTA+AGG | 0.368542 | 2.4:-70686202 | MS.gene071487:CDS |
| TTGTCAACCTGCTACATTGC+TGG | 0.372075 | 2.4:+70686139 | None:intergenic |
| GAAGAGGAAGATGTGAGTTA+TGG | 0.375825 | 2.4:-70686372 | MS.gene071487:CDS |
| CTTTACTTATGGATGGAAGT+TGG | 0.392836 | 2.4:-70686455 | MS.gene071487:CDS |
| CAGAATTTGATGACTTGAAA+AGG | 0.424158 | 2.4:-70684410 | MS.gene071487:CDS |
| GAGATGATGGGAAGAAGAAA+AGG | 0.443829 | 2.4:-70686350 | MS.gene071487:CDS |
| AAGGAGTTGTAGGAGGCGTT+TGG | 0.456087 | 2.4:-70684391 | MS.gene071487:CDS |
| TGAAGTAGAAGTAGAAGAAG+AGG | 0.463169 | 2.4:-70686388 | MS.gene071487:CDS |
| ATGGATGGAAGTTGGGGTGA+GGG | 0.465253 | 2.4:-70686447 | MS.gene071487:CDS |
| GATGTGAGTTATGGAGATGA+TGG | 0.466595 | 2.4:-70686363 | MS.gene071487:CDS |
| AACAGGAAAGGGTCAAAAGC+TGG | 0.479614 | 2.4:-70686306 | MS.gene071487:CDS |
| AGTTGTAGGAGGCGTTTGGC+TGG | 0.487448 | 2.4:-70684387 | MS.gene071487:CDS |
| TATGGATGGAAGTTGGGGTG+AGG | 0.500828 | 2.4:-70686448 | MS.gene071487:CDS |
| TGACTGATCATCTTTACAAC+AGG | 0.501584 | 2.4:-70686323 | MS.gene071487:CDS |
| ATCATCTTTACAACAGGAAA+GGG | 0.510630 | 2.4:-70686317 | MS.gene071487:CDS |
| GATTTACCTTTACTTATGGA+TGG | 0.521525 | 2.4:-70686462 | MS.gene071487:CDS |
| CAACTTCCATCCATAAGTAA+AGG | 0.525127 | 2.4:+70686456 | None:intergenic |
| TTGAAGCTCTGAAATGAGTA+CGG | 0.530837 | 2.4:+70686173 | None:intergenic |
| GCAGTACCATAAGCGCCATA+AGG | 0.534642 | 2.4:-70686223 | MS.gene071487:CDS |
| TTACTTATGGATGGAAGTTG+GGG | 0.539498 | 2.4:-70686453 | MS.gene071487:CDS |
| GATCATCTTTACAACAGGAA+AGG | 0.569404 | 2.4:-70686318 | MS.gene071487:CDS |
| GTACGGAATGAGCCTTAGAA+TGG | 0.572289 | 2.4:+70686190 | None:intergenic |
| AGATGATGGGAAGAAGAAAA+GGG | 0.572790 | 2.4:-70686349 | MS.gene071487:CDS |
| CAGTTATCAACTTGACAAGA+AGG | 0.576877 | 2.4:+70686270 | None:intergenic |
| ATGTGAGTTATGGAGATGAT+GGG | 0.595276 | 2.4:-70686362 | MS.gene071487:CDS |
| TCATTTCAGAGCTTCAACAA+AGG | 0.599380 | 2.4:-70686167 | MS.gene071487:CDS |
| ACTTGAAAAGGAGTTGTAGG+AGG | 0.645868 | 2.4:-70684398 | MS.gene071487:CDS |
| TGATGGGAAGAAGAAAAGGG+TGG | 0.655448 | 2.4:-70686346 | MS.gene071487:CDS |
| AGGAAAGGGTCAAAAGCTGG+AGG | 0.666819 | 2.4:-70686303 | MS.gene071487:CDS |
| GTTTGGCTGGACATAACGAG+AGG | 0.681910 | 2.4:-70684374 | MS.gene071487:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTAATATTTACTAGAAA+TGG | + | chr2.4:70684964-70684983 | None:intergenic | 10.0% |
| !!! | AAAACAAGTTTTTTTTAATA+TGG | - | chr2.4:70685260-70685279 | MS.gene071487:intron | 10.0% |
| !!! | AAAATGATAGATTTTTATAA+GGG | + | chr2.4:70685190-70685209 | None:intergenic | 10.0% |
| !!! | ATTTCATCATTATAATTTTT+TGG | - | chr2.4:70685428-70685447 | MS.gene071487:intron | 10.0% |
| !!! | ATTTTGTAAAAATAAGATTA+AGG | - | chr2.4:70685341-70685360 | MS.gene071487:intron | 10.0% |
| !!! | TAAAAAAAACTTGTTTTATA+TGG | + | chr2.4:70685257-70685276 | None:intergenic | 10.0% |
| !!! | TAAAATGATAGATTTTTATA+AGG | + | chr2.4:70685191-70685210 | None:intergenic | 10.0% |
| !!! | TTATTTTTTAATATTCCAAT+AGG | - | chr2.4:70685088-70685107 | MS.gene071487:intron | 10.0% |
| !!! | TTTTGTAAAAATAAGATTAA+GGG | - | chr2.4:70685342-70685361 | MS.gene071487:intron | 10.0% |
| !!! | TTTTTTTTTTCTATCAAATA+AGG | - | chr2.4:70684906-70684925 | MS.gene071487:intron | 10.0% |
| !! | AATTAATTAGTTGTAAATCA+TGG | + | chr2.4:70686325-70686344 | None:intergenic | 15.0% |
| !! | ATTAATTAGTTGTAAATCAT+GGG | + | chr2.4:70686324-70686343 | None:intergenic | 15.0% |
| !! | TAATTATTAACTTATAGCTT+TGG | - | chr2.4:70686340-70686359 | MS.gene071487:CDS | 15.0% |
| !!! | CATTTTACTAAAAATAGTAA+GGG | - | chr2.4:70685204-70685223 | MS.gene071487:intron | 15.0% |
| !!! | TCATTTTACTAAAAATAGTA+AGG | - | chr2.4:70685203-70685222 | MS.gene071487:intron | 15.0% |
| !!! | TTTATATGGACTTTTAAAAA+AGG | + | chr2.4:70685243-70685262 | None:intergenic | 15.0% |
| !!! | TTTTTTATTGATAAATACCT+TGG | - | chr2.4:70684824-70684843 | MS.gene071487:intron | 15.0% |
| !! | AAAAATAAAATAAAGGGAAG+TGG | - | chr2.4:70685385-70685404 | MS.gene071487:intron | 20.0% |
| !! | AAATATTGAGGTTCAATATA+AGG | + | chr2.4:70684746-70684765 | None:intergenic | 20.0% |
| !! | AAGACAGGAAAAAAAAATTA+GGG | - | chr2.4:70686092-70686111 | MS.gene071487:intron | 20.0% |
| !! | AAGATATTCAAGGAAAAAAA+AGG | + | chr2.4:70684704-70684723 | None:intergenic | 20.0% |
| !! | ATAAGATTAAGGGTAAAATA+CGG | - | chr2.4:70685352-70685371 | MS.gene071487:intron | 20.0% |
| !! | ATGAACATCAATAAATATTC+AGG | + | chr2.4:70685763-70685782 | None:intergenic | 20.0% |
| !! | TACTAATACTAAGATATTCA+AGG | + | chr2.4:70684714-70684733 | None:intergenic | 20.0% |
| !! | TCAAAAAAAATGTTCAAATG+TGG | - | chr2.4:70685286-70685305 | MS.gene071487:intron | 20.0% |
| !! | TGAACATCAATAAATATTCA+GGG | + | chr2.4:70685762-70685781 | None:intergenic | 20.0% |
| !! | TTAAGCTTCTTAACAAATAA+GGG | - | chr2.4:70685143-70685162 | MS.gene071487:intron | 20.0% |
| !! | TTTAAGCTTCTTAACAAATA+AGG | - | chr2.4:70685142-70685161 | MS.gene071487:intron | 20.0% |
| !! | TTTGTGCATCATTATAAAAT+GGG | - | chr2.4:70684998-70685017 | MS.gene071487:intron | 20.0% |
| !!! | ACCATATTTTACTATAAAAG+AGG | + | chr2.4:70685319-70685338 | None:intergenic | 20.0% |
| !!! | ACCTCTTTTATAGTAAAATA+TGG | - | chr2.4:70685315-70685334 | MS.gene071487:intron | 20.0% |
| !!! | CATGAAGTATCTTTAAAAAA+TGG | + | chr2.4:70686067-70686086 | None:intergenic | 20.0% |
| !!! | CATTTTTTAAAGATACTTCA+TGG | - | chr2.4:70686065-70686084 | MS.gene071487:intron | 20.0% |
| !!! | TTTTACTATAAAAGAGGTAA+TGG | + | chr2.4:70685313-70685332 | None:intergenic | 20.0% |
| ! | ACACAATGTTCTTCATATAT+AGG | - | chr2.4:70686277-70686296 | MS.gene071487:CDS | 25.0% |
| ! | AGGAAAAAAAAGGTGAAATT+AGG | + | chr2.4:70684694-70684713 | None:intergenic | 25.0% |
| ! | ATATATGATCTTGAAGTTGA+AGG | + | chr2.4:70685907-70685926 | None:intergenic | 25.0% |
| ! | ATGCTAACAATTGTATGTTA+AGG | - | chr2.4:70685023-70685042 | MS.gene071487:intron | 25.0% |
| ! | CAAGACAGGAAAAAAAAATT+AGG | - | chr2.4:70686091-70686110 | MS.gene071487:intron | 25.0% |
| ! | CTTTGTGCATCATTATAAAA+TGG | - | chr2.4:70684997-70685016 | MS.gene071487:intron | 25.0% |
| ! | GAAAATTGTAATCAACCTAT+TGG | + | chr2.4:70685106-70685125 | None:intergenic | 25.0% |
| ! | GAACATCAATAAATATTCAG+GGG | + | chr2.4:70685761-70685780 | None:intergenic | 25.0% |
| ! | GGAAAAAAAAGGTGAAATTA+GGG | + | chr2.4:70684693-70684712 | None:intergenic | 25.0% |
| ! | TTCTTAACAAATAAGGGTTA+TGG | - | chr2.4:70685149-70685168 | MS.gene071487:intron | 25.0% |
| !! | ACCAACAAATTTTTCCAATT+GGG | + | chr2.4:70685717-70685736 | None:intergenic | 25.0% |
| !! | AGAACATTGTGTATATGTTT+TGG | + | chr2.4:70686269-70686288 | None:intergenic | 25.0% |
| !! | CTTTAGTCATCACTTAATTT+TGG | - | chr2.4:70685989-70686008 | MS.gene071487:intron | 25.0% |
| !! | TACCAACAAATTTTTCCAAT+TGG | + | chr2.4:70685718-70685737 | None:intergenic | 25.0% |
| !! | TTGGAATATGGTTTTTCTAT+AGG | - | chr2.4:70686359-70686378 | MS.gene071487:CDS | 25.0% |
| !!! | CACTTTTGAACATTTTTTAG+AGG | + | chr2.4:70684933-70684952 | None:intergenic | 25.0% |
| !!! | TAACTTATAGCTTTGGAATA+TGG | - | chr2.4:70686347-70686366 | MS.gene071487:CDS | 25.0% |
| !!! | TAGGTTGATTACAATTTTCA+TGG | - | chr2.4:70685107-70685126 | MS.gene071487:intron | 25.0% |
| !!! | TCATATTAGATGCACTTTTT+TGG | - | chr2.4:70685454-70685473 | MS.gene071487:intron | 25.0% |
| !!! | TTTTTAAAGATACTTCATGG+AGG | - | chr2.4:70686068-70686087 | MS.gene071487:intron | 25.0% |
| !!! | TTTTTTTTTGAAGAAGCACA+AGG | + | chr2.4:70686211-70686230 | None:intergenic | 25.0% |
| AAATGCTATTCGTCTATAGT+TGG | + | chr2.4:70685966-70685985 | None:intergenic | 30.0% | |
| AAGTTTAGCACTATATAGCT+AGG | + | chr2.4:70685638-70685657 | None:intergenic | 30.0% | |
| AATGGTATTCACAAACCTTA+TGG | + | chr2.4:70684600-70684619 | None:intergenic | 30.0% | |
| ATCATCTTTACAACAGGAAA+GGG | - | chr2.4:70684488-70684507 | MS.gene071487:intron | 30.0% | |
| CAAATTTGTGACTTAAACGT+TGG | - | chr2.4:70686158-70686177 | MS.gene071487:CDS | 30.0% | |
| CTTAGTTATTAGTAAGACCA+AGG | + | chr2.4:70684844-70684863 | None:intergenic | 30.0% | |
| TGGTTAATTTAGTATGCACA+AGG | + | chr2.4:70686249-70686268 | None:intergenic | 30.0% | |
| TTTAAAAAAGGAGCCAAATG+TGG | + | chr2.4:70685231-70685250 | None:intergenic | 30.0% | |
| TTTACTTATGGATGGAAGTT+GGG | - | chr2.4:70684351-70684370 | MS.gene071487:CDS | 30.0% | |
| TTTGTAGGAGTGAAAATCAA+AGG | + | chr2.4:70685603-70685622 | None:intergenic | 30.0% | |
| ! | CAGAATTTGATGACTTGAAA+AGG | - | chr2.4:70686395-70686414 | MS.gene071487:CDS | 30.0% |
| ! | GTTTTTCTATAGGTTTCATG+AGG | - | chr2.4:70686369-70686388 | MS.gene071487:CDS | 30.0% |
| !! | TTGGAAAAATTTGTTGGTAC+AGG | - | chr2.4:70685719-70685738 | MS.gene071487:intron | 30.0% |
| !! | TTTGATTTTCACTCCTACAA+AGG | - | chr2.4:70685602-70685621 | MS.gene071487:intron | 30.0% |
| !!! | TTAGATGCACTTTTTTGGAT+AGG | - | chr2.4:70685459-70685478 | MS.gene071487:intron | 30.0% |
| AAATAGTAAGGGTCCACATT+TGG | - | chr2.4:70685215-70685234 | MS.gene071487:intron | 35.0% | |
| AGCATGTTGGGGTAATTAAA+AGG | + | chr2.4:70685858-70685877 | None:intergenic | 35.0% | |
| AGGCTAACTATATCCTTTGT+AGG | + | chr2.4:70685618-70685637 | None:intergenic | 35.0% | |
| ATGACTTGAAAAGGAGTTGT+AGG | - | chr2.4:70686404-70686423 | MS.gene071487:CDS | 35.0% | |
| ATGTGAGTTATGGAGATGAT+GGG | - | chr2.4:70684443-70684462 | MS.gene071487:intron | 35.0% | |
| CAACTTCCATCCATAAGTAA+AGG | + | chr2.4:70684352-70684371 | None:intergenic | 35.0% | |
| CAGTTATCAACTTGACAAGA+AGG | + | chr2.4:70684538-70684557 | None:intergenic | 35.0% | |
| CCACTTCACATCAAATATTG+AGG | + | chr2.4:70684758-70684777 | None:intergenic | 35.0% | |
| CCTCAATATTTGATGTGAAG+TGG | - | chr2.4:70684755-70684774 | MS.gene071487:intron | 35.0% | |
| CTTTACTTATGGATGGAAGT+TGG | - | chr2.4:70684350-70684369 | MS.gene071487:CDS | 35.0% | |
| GACACAGGTTAAAACTGATT+TGG | + | chr2.4:70686189-70686208 | None:intergenic | 35.0% | |
| GATCATCTTTACAACAGGAA+AGG | - | chr2.4:70684487-70684506 | MS.gene071487:intron | 35.0% | |
| GCCCAATTGGAAAAATTTGT+TGG | - | chr2.4:70685713-70685732 | MS.gene071487:intron | 35.0% | |
| GGAAAATGTCTGTAAGTTAC+TGG | - | chr2.4:70685480-70685499 | MS.gene071487:intron | 35.0% | |
| GGTTTGTGAATACCATTCTA+AGG | - | chr2.4:70684603-70684622 | MS.gene071487:intron | 35.0% | |
| TCATTTCAGAGCTTCAACAA+AGG | - | chr2.4:70684638-70684657 | MS.gene071487:intron | 35.0% | |
| TGAAGTAGAAGTAGAAGAAG+AGG | - | chr2.4:70684417-70684436 | MS.gene071487:CDS | 35.0% | |
| TGACTGATCATCTTTACAAC+AGG | - | chr2.4:70684482-70684501 | MS.gene071487:intron | 35.0% | |
| TTACTTATGGATGGAAGTTG+GGG | - | chr2.4:70684352-70684371 | MS.gene071487:CDS | 35.0% | |
| ! | TATAGCAGTGTTACTGTGAT+TGG | - | chr2.4:70685926-70685945 | MS.gene071487:intron | 35.0% |
| ! | TTTTGTGTTGTCAACTTCGT+GGG | + | chr2.4:70686031-70686050 | None:intergenic | 35.0% |
| !! | AGATGATGGGAAGAAGAAAA+GGG | - | chr2.4:70684456-70684475 | MS.gene071487:intron | 35.0% |
| !! | TTGAAGCTCTGAAATGAGTA+CGG | + | chr2.4:70684635-70684654 | None:intergenic | 35.0% |
| ACATAGAACTCACACTCACA+GGG | - | chr2.4:70685798-70685817 | MS.gene071487:intron | 40.0% | |
| ACTTGAAAAGGAGTTGTAGG+AGG | - | chr2.4:70686407-70686426 | MS.gene071487:CDS | 40.0% | |
| ATTTGATGTGAAGTGGCTGA+GGG | - | chr2.4:70684762-70684781 | MS.gene071487:intron | 40.0% | |
| CACGAAGTTGACAACACAAA+AGG | - | chr2.4:70686030-70686049 | MS.gene071487:intron | 40.0% | |
| CTATGAGTTGTCTCTTGCTA+GGG | + | chr2.4:70684867-70684886 | None:intergenic | 40.0% | |
| GAAGAGGAAGATGTGAGTTA+TGG | - | chr2.4:70684433-70684452 | MS.gene071487:intron | 40.0% | |
| GATGTGAGTTATGGAGATGA+TGG | - | chr2.4:70684442-70684461 | MS.gene071487:intron | 40.0% | |
| GATTTAGCAACTTGCCCAAT+TGG | - | chr2.4:70685700-70685719 | MS.gene071487:intron | 40.0% | |
| TACATAGAACTCACACTCAC+AGG | - | chr2.4:70685797-70685816 | MS.gene071487:intron | 40.0% | |
| TATTTGATGTGAAGTGGCTG+AGG | - | chr2.4:70684761-70684780 | MS.gene071487:intron | 40.0% | |
| TTTAGTATGCACAAGGACAC+AGG | + | chr2.4:70686242-70686261 | None:intergenic | 40.0% | |
| TTTGTGTTGTCAACTTCGTG+GGG | + | chr2.4:70686030-70686049 | None:intergenic | 40.0% | |
| ! | CTTTTGTGTTGTCAACTTCG+TGG | + | chr2.4:70686032-70686051 | None:intergenic | 40.0% |
| ! | GATATTCAGACGTGCTTTTG+CGG | + | chr2.4:70686459-70686478 | None:intergenic | 40.0% |
| !! | GAGATGATGGGAAGAAGAAA+AGG | - | chr2.4:70684455-70684474 | MS.gene071487:intron | 40.0% |
| AACAGGAAAGGGTCAAAAGC+TGG | - | chr2.4:70684499-70684518 | MS.gene071487:intron | 45.0% | |
| ATACTTCATGGAGGCAAGAC+AGG | - | chr2.4:70686077-70686096 | MS.gene071487:intron | 45.0% | |
| ATGTCCCTATCTCAGCATGT+TGG | + | chr2.4:70685871-70685890 | None:intergenic | 45.0% | |
| CACAAACCTTATGGCGCTTA+TGG | + | chr2.4:70684591-70684610 | None:intergenic | 45.0% | |
| CCTAGCAAGAGACAACTCAT+AGG | - | chr2.4:70684865-70684884 | MS.gene071487:intron | 45.0% | |
| CCTATGAGTTGTCTCTTGCT+AGG | + | chr2.4:70684868-70684887 | None:intergenic | 45.0% | |
| GTACGGAATGAGCCTTAGAA+TGG | + | chr2.4:70684618-70684637 | None:intergenic | 45.0% | |
| TACCCCAACATGCTGAGATA+GGG | - | chr2.4:70685864-70685883 | MS.gene071487:intron | 45.0% | |
| TGATGGGAAGAAGAAAAGGG+TGG | - | chr2.4:70684459-70684478 | MS.gene071487:intron | 45.0% | |
| TGTCCCTATCTCAGCATGTT+GGG | + | chr2.4:70685870-70685889 | None:intergenic | 45.0% | |
| TTACCCCAACATGCTGAGAT+AGG | - | chr2.4:70685863-70685882 | MS.gene071487:intron | 45.0% | |
| TTGTCAACCTGCTACATTGC+TGG | + | chr2.4:70684669-70684688 | None:intergenic | 45.0% | |
| ! | TTGAAGAAGCACAAGGACAC+AGG | + | chr2.4:70686204-70686223 | None:intergenic | 45.0% |
| !!! | ATTTTGTAAAAATAAAATAA+AGG | - | chr2.4:70685378-70685397 | MS.gene071487:intron | 5.0% |
| !!! | TTTTGTAAAAATAAAATAAA+GGG | - | chr2.4:70685379-70685398 | MS.gene071487:intron | 5.0% |
| AGGAAAGGGTCAAAAGCTGG+AGG | - | chr2.4:70684502-70684521 | MS.gene071487:intron | 50.0% | |
| ATGGATGGAAGTTGGGGTGA+GGG | - | chr2.4:70684358-70684377 | MS.gene071487:CDS | 50.0% | |
| GCAGTACCATAAGCGCCATA+AGG | - | chr2.4:70684582-70684601 | MS.gene071487:intron | 50.0% | |
| GTCCCTATCTCAGCATGTTG+GGG | + | chr2.4:70685869-70685888 | None:intergenic | 50.0% | |
| GTTTGGCTGGACATAACGAG+AGG | - | chr2.4:70686431-70686450 | MS.gene071487:CDS | 50.0% | |
| TATGGATGGAAGTTGGGGTG+AGG | - | chr2.4:70684357-70684376 | MS.gene071487:CDS | 50.0% | |
| ! | GGTTTTGCCAGCAATGTAGC+AGG | - | chr2.4:70684659-70684678 | MS.gene071487:intron | 50.0% |
| !! | AAGGAGTTGTAGGAGGCGTT+TGG | - | chr2.4:70686414-70686433 | MS.gene071487:CDS | 50.0% |
| !! | AGTTGTAGGAGGCGTTTGGC+TGG | - | chr2.4:70686418-70686437 | MS.gene071487:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 70684344 | 70686483 | 70684344 | ID=MS.gene071487 |
| chr2.4 | mRNA | 70684344 | 70686483 | 70684344 | ID=MS.gene071487.t1;Parent=MS.gene071487 |
| chr2.4 | exon | 70686147 | 70686483 | 70686147 | ID=MS.gene071487.t1.exon1;Parent=MS.gene071487.t1 |
| chr2.4 | CDS | 70686147 | 70686483 | 70686147 | ID=cds.MS.gene071487.t1;Parent=MS.gene071487.t1 |
| chr2.4 | exon | 70684344 | 70684446 | 70684344 | ID=MS.gene071487.t1.exon2;Parent=MS.gene071487.t1 |
| chr2.4 | CDS | 70684344 | 70684446 | 70684344 | ID=cds.MS.gene071487.t1;Parent=MS.gene071487.t1 |
| Gene Sequence |
| Protein sequence |
