AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene072264

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072264.t1 MTR_6g016470 91.855 1019 81 2 1 1017 1 1019 0.0 1894
MS.gene072264.t1 MTR_7g095710 68.482 955 287 7 71 1017 104 1052 0.0 1261
MS.gene072264.t1 MTR_8g013780 95.986 573 23 0 447 1019 1 573 0.0 1135
MS.gene072264.t1 MTR_2g038310 56.256 967 399 9 52 1009 123 1074 0.0 1022
MS.gene072264.t1 MTR_4g008170 56.540 971 394 12 50 1009 133 1086 0.0 1013
MS.gene072264.t1 MTR_4g008170 55.918 980 393 14 50 1009 133 1093 0.0 995
MS.gene072264.t1 MTR_2g038310 56.723 885 359 9 52 927 123 992 0.0 921
MS.gene072264.t1 MTR_8g013810 94.748 457 18 1 1 457 1 451 0.0 891
MS.gene072264.t1 MTR_4g008650 48.133 964 455 16 55 1004 79 1011 0.0 859
MS.gene072264.t1 MTR_8g090125 47.954 953 453 16 69 1007 49 972 0.0 846
MS.gene072264.t1 MTR_4g096990 48.539 958 458 14 56 1004 81 1012 0.0 817
MS.gene072264.t1 MTR_5g015590 48.049 974 465 16 41 1004 72 1014 0.0 807
MS.gene072264.t1 MTR_3g103070 46.722 961 475 12 55 1004 82 1016 0.0 799
MS.gene072264.t1 MTR_4g043690 46.122 954 471 14 69 1007 96 1021 0.0 797
MS.gene072264.t1 MTR_0005s0140 46.122 954 471 14 69 1007 11 936 0.0 797
MS.gene072264.t1 MTR_3g103070 49.015 863 406 11 153 1004 1 840 0.0 753
MS.gene072264.t1 MTR_5g015590 48.606 897 420 16 41 927 72 937 0.0 741
MS.gene072264.t1 MTR_2g105830 52.825 761 342 10 40 794 106 855 0.0 729
MS.gene072264.t1 MTR_8g446010 41.368 950 512 16 69 1004 49 967 0.0 688
MS.gene072264.t1 MTR_8g045070 40.569 949 498 15 69 1004 49 944 0.0 673
MS.gene072264.t1 MTR_4g008650 47.074 786 375 15 55 830 79 833 0.0 667
MS.gene072264.t1 MTR_5g015590 47.236 796 383 15 41 830 72 836 0.0 620
MS.gene072264.t1 MTR_5g015590 45.811 740 364 15 41 774 72 780 5.63e-178 538
MS.gene072264.t1 MTR_5g097270 31.531 980 588 19 52 1002 79 1004 2.18e-138 442
MS.gene072264.t1 MTR_4g014480 29.783 1014 617 23 19 1004 3 949 1.31e-125 407
MS.gene072264.t1 MTR_7g100110 32.316 885 461 28 101 885 38 884 5.38e-104 350
MS.gene072264.t1 MTR_8g027160 30.876 868 490 23 106 886 25 869 1.22e-93 318
MS.gene072264.t1 MTR_2g105690 62.613 222 78 1 793 1009 22 243 2.14e-92 295
MS.gene072264.t1 MTR_8g027160 30.796 867 490 23 106 885 25 868 2.36e-92 318
MS.gene072264.t1 MTR_3g103270 30.238 840 473 19 124 890 65 864 1.51e-88 306
MS.gene072264.t1 MTR_8g027160 29.841 754 420 22 106 773 25 755 2.14e-67 241
MS.gene072264.t1 MTR_8g027160 29.708 754 421 22 106 773 25 755 3.66e-67 241
MS.gene072264.t1 MTR_8g089870 24.242 759 471 21 153 881 69 753 3.61e-44 173
MS.gene072264.t1 MTR_4g116950 22.849 709 438 21 122 816 44 657 2.51e-43 171
MS.gene072264.t1 MTR_2g036650 24.378 603 371 12 218 816 141 662 2.88e-43 171
MS.gene072264.t1 MTR_7g117500 23.021 821 497 25 220 1019 145 851 4.13e-43 171
MS.gene072264.t1 MTR_4g127710 23.462 699 446 19 122 816 46 659 6.21e-43 170
MS.gene072264.t1 MTR_4g127710 23.462 699 446 19 122 816 46 659 9.39e-43 169
MS.gene072264.t1 MTR_2g449840 23.625 618 371 17 218 824 137 664 1.43e-41 165
MS.gene072264.t1 MTR_2g104860 24.110 618 368 17 218 824 134 661 5.52e-41 164
MS.gene072264.t1 MTR_3g108800 24.792 601 370 15 218 816 135 655 6.04e-41 164
MS.gene072264.t1 MTR_3g108800 24.792 601 370 15 218 816 136 656 7.03e-41 163
MS.gene072264.t1 MTR_1g009760 24.126 601 374 15 218 816 139 659 1.03e-40 162
MS.gene072264.t1 MTR_6g011310 23.786 618 370 19 218 824 138 665 2.12e-40 162
MS.gene072264.t1 MTR_1g009760 24.466 609 362 18 218 816 136 656 2.34e-40 162
MS.gene072264.t1 MTR_4g107500 23.786 618 370 19 218 824 140 667 1.09e-39 159
MS.gene072264.t1 MTR_7g117500 22.549 816 496 26 220 1019 145 840 1.16e-39 159
MS.gene072264.t1 MTR_8g063880 23.920 602 374 15 218 816 136 656 4.00e-39 158
MS.gene072264.t1 MTR_1g009720 23.810 609 366 17 218 816 136 656 4.53e-39 157
MS.gene072264.t1 MTR_6g011310 24.110 618 363 20 218 824 138 660 6.00e-39 157
MS.gene072264.t1 MTR_8g006790 22.735 607 389 14 218 824 144 670 5.33e-36 148
MS.gene072264.t1 MTR_5g052190 76.250 80 19 0 520 599 279 358 1.27e-31 134
MS.gene072264.t1 MTR_3g097560 23.358 685 392 21 172 779 215 843 2.89e-21 100
MS.gene072264.t1 MTR_2g035840 31.694 183 93 3 639 821 788 938 2.24e-18 91.3
MS.gene072264.t1 MTR_4g094695 29.798 198 106 4 624 821 775 939 2.81e-18 91.3
MS.gene072264.t1 MTR_8g079250 29.508 183 97 3 639 821 788 938 1.97e-16 85.1
MS.gene072264.t1 MTR_5g010420 31.694 183 89 5 619 798 757 906 3.18e-16 84.3
MS.gene072264.t1 MTR_4g008640 46.078 102 48 3 579 680 76 170 3.67e-16 77.8
MS.gene072264.t1 MTR_8g012390 29.907 214 110 5 627 839 748 922 5.84e-16 83.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene072264.t1 AT3G22910 67.191 1018 305 11 12 1018 17 1016 0.0 1305
MS.gene072264.t1 AT3G63380 66.402 1006 301 9 28 1013 27 1015 0.0 1278
MS.gene072264.t1 AT4G29900 56.635 957 399 8 69 1017 114 1062 0.0 1055
MS.gene072264.t1 AT4G29900 56.635 957 399 8 69 1017 114 1062 0.0 1055
MS.gene072264.t1 AT5G57110 56.445 962 401 7 64 1017 109 1060 0.0 1051
MS.gene072264.t1 AT5G57110 56.445 962 401 7 64 1017 109 1060 0.0 1051
MS.gene072264.t1 AT5G57110 56.445 962 401 7 64 1017 109 1060 0.0 1051
MS.gene072264.t1 AT3G21180 56.062 965 403 11 65 1017 124 1079 0.0 1015
MS.gene072264.t1 AT3G57330 48.013 956 460 13 56 1004 25 950 0.0 862
MS.gene072264.t1 AT3G57330 47.908 956 461 12 56 1004 80 1005 0.0 862
MS.gene072264.t1 AT2G41560 44.763 1012 512 15 6 1007 37 1011 0.0 838
MS.gene072264.t1 AT2G41560 46.965 939 458 14 79 1007 1 909 0.0 825
MS.gene072264.t1 AT2G41560 46.965 939 458 14 79 1007 1 909 0.0 825
MS.gene072264.t1 AT2G41560 46.965 939 458 14 79 1007 1 909 0.0 825
MS.gene072264.t1 AT1G27770 47.341 959 467 14 58 1004 85 1017 0.0 815
MS.gene072264.t1 AT1G27770 47.341 959 467 14 58 1004 85 1017 0.0 815
MS.gene072264.t1 AT1G27770 47.237 959 468 13 58 1004 22 954 0.0 813
MS.gene072264.t1 AT4G37640 47.034 961 473 13 55 1004 79 1014 0.0 788
MS.gene072264.t1 AT2G22950 47.347 961 471 14 55 1004 79 1015 0.0 782
MS.gene072264.t1 AT5G53010 37.514 909 491 17 69 951 140 997 4.26e-177 544
MS.gene072264.t1 AT5G53010 37.270 652 390 10 62 712 133 766 1.79e-125 400
MS.gene072264.t1 AT1G27770 41.308 581 311 10 55 621 82 646 9.41e-121 393
MS.gene072264.t1 AT1G27770 57.605 309 126 2 701 1004 635 943 1.87e-108 360
MS.gene072264.t1 AT1G07670 33.413 835 465 24 122 885 54 868 8.79e-107 358
MS.gene072264.t1 AT1G07670 33.413 835 465 24 122 885 54 868 8.79e-107 358
MS.gene072264.t1 AT1G07810 33.413 835 465 24 122 885 54 868 1.73e-106 357
MS.gene072264.t1 AT4G00900 32.712 859 468 25 94 868 14 846 5.61e-100 339
MS.gene072264.t1 AT4G00900 32.712 859 468 25 94 868 14 846 5.61e-100 339
MS.gene072264.t1 AT1G10130 30.668 838 475 21 122 890 32 832 5.20e-90 310
MS.gene072264.t1 AT1G80660 23.987 617 370 18 218 824 10 537 3.69e-43 170
MS.gene072264.t1 AT1G80660 23.987 617 370 18 218 824 139 666 4.55e-43 170
MS.gene072264.t1 AT1G80660 23.987 617 370 18 218 824 139 666 4.73e-43 170
MS.gene072264.t1 AT1G80660 23.987 617 370 18 218 824 139 666 5.26e-43 170
MS.gene072264.t1 AT2G24520 25.295 593 361 14 225 816 188 699 9.22e-43 169
MS.gene072264.t1 AT2G24520 25.295 593 361 14 225 816 125 636 9.24e-43 169
MS.gene072264.t1 AT2G24520 25.295 593 361 14 225 816 125 636 9.24e-43 169
MS.gene072264.t1 AT3G60330 24.217 607 361 18 219 816 138 654 1.42e-42 169
MS.gene072264.t1 AT3G60330 24.217 607 361 18 219 816 138 654 1.42e-42 169
MS.gene072264.t1 AT3G60330 24.053 607 362 18 219 816 138 654 3.56e-42 167
MS.gene072264.t1 AT3G60330 24.053 607 362 18 219 816 138 654 3.56e-42 167
MS.gene072264.t1 AT3G42640 23.026 760 469 25 78 824 8 664 5.42e-41 164
MS.gene072264.t1 AT2G07560 23.402 782 484 23 78 847 8 686 6.71e-41 164
MS.gene072264.t1 AT3G47950 22.329 833 497 31 218 1019 142 855 1.06e-40 163
MS.gene072264.t1 AT3G47950 22.329 833 497 31 218 1019 142 855 1.06e-40 163
MS.gene072264.t1 AT1G17260 23.974 609 364 13 218 816 142 661 1.24e-39 159
MS.gene072264.t1 AT4G30190 24.176 637 390 17 218 847 134 684 2.33e-39 159
MS.gene072264.t1 AT5G62670 23.501 617 373 18 218 824 138 665 2.34e-39 159
MS.gene072264.t1 AT2G18960 23.975 634 395 16 218 847 70 620 1.26e-38 156
MS.gene072264.t1 AT2G18960 23.975 634 395 16 218 847 70 620 1.26e-38 156
MS.gene072264.t1 AT2G18960 23.975 634 395 16 218 847 134 684 1.55e-38 156
MS.gene072264.t1 AT5G57350 23.762 606 370 16 218 816 135 655 5.75e-38 154
MS.gene072264.t1 AT5G57350 23.762 606 370 16 218 816 135 655 5.75e-38 154
MS.gene072264.t1 AT5G57350 23.762 606 370 16 218 816 135 655 5.75e-38 154
MS.gene072264.t1 AT4G30190 23.169 669 390 20 218 847 134 717 4.36e-36 148
MS.gene072264.t1 AT2G24520 24.074 432 277 8 385 816 13 393 7.29e-28 121
MS.gene072264.t1 AT5G57350 24.194 434 274 10 385 816 13 393 3.55e-27 119
MS.gene072264.t1 AT5G23630 22.917 672 384 21 172 766 215 829 1.30e-20 99.0
MS.gene072264.t1 AT1G63440 31.148 183 94 2 639 821 787 937 9.41e-19 92.8
MS.gene072264.t1 AT5G44790 31.818 198 102 4 624 821 784 948 4.46e-18 90.5
MS.gene072264.t1 AT4G11730 23.235 340 215 13 122 454 45 345 8.20e-16 82.8
MS.gene072264.t1 AT4G30110 27.358 212 114 4 636 847 508 679 5.31e-15 80.5
MS.gene072264.t1 AT4G30110 27.358 212 114 4 636 847 508 679 5.31e-15 80.5

Find 165 sgRNAs with CRISPR-Local

Find 202 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAACAGCAGTTCAGTTATTA+TGG 0.164193 8.3:+75003720 MS.gene072264:CDS
TCATGACAATCTATTGTTCT+AGG 0.188399 8.3:+75001042 MS.gene072264:CDS
AATAACTGAACTGCTGTTAA+TGG 0.205635 8.3:-75003716 None:intergenic
TGAGTTTAATGCAAGGAAAT+TGG 0.225227 8.3:+75004003 MS.gene072264:CDS
TCTTATATTGTTTGTGTTGT+TGG 0.228608 8.3:-75001006 None:intergenic
CTATAGCAACAGTTATAAAT+TGG 0.243600 8.3:+75003585 MS.gene072264:CDS
ACTTTCTGCGTGTGAGACTA+TGG 0.256241 8.3:+75002216 MS.gene072264:CDS
ATTATGGGTGAATTTGATTA+TGG 0.264335 8.3:+75003736 MS.gene072264:CDS
TTTAACAATTCTTATTCTTT+TGG 0.264806 8.3:+75001391 MS.gene072264:CDS
AAATGAAGGTCACAAAGTTT+TGG 0.276505 8.3:+75002414 MS.gene072264:CDS
AATGCTATCTTGGGCTGTTT+TGG 0.282495 8.3:+75002601 MS.gene072264:CDS
AACCGATGTAACGAGCATTT+TGG 0.283162 8.3:-75001822 None:intergenic
AAAACCTACTAAGGATTTAA+TGG 0.285321 8.3:+75003790 MS.gene072264:CDS
GTTTCATCTGTGTCCTGATT+AGG 0.302304 8.3:-75003287 None:intergenic
TTTGGAATTGAAAATGGATA+TGG 0.303373 8.3:+75002619 MS.gene072264:CDS
CTTAAAACTAACATTGAGTT+TGG 0.304565 8.3:+75001245 MS.gene072264:CDS
CAATGATATTCAAATTGATT+TGG 0.308945 8.3:+75001577 MS.gene072264:CDS
GTTATCAGTCTTTGTGTTCC+CGG 0.323015 8.3:-75002008 None:intergenic
TTCGTCAATGTCGTTGCTTA+TGG 0.324687 8.3:-75001879 None:intergenic
CTTTCCAATGTGCAATAGTT+TGG 0.325768 8.3:-75002736 None:intergenic
GCTGCTGTTTCTTGGCCAAT+TGG 0.334729 8.3:+75004184 MS.gene072264:CDS
GAGTTAACAAAATAACTATT+TGG 0.336053 8.3:-75003889 None:intergenic
TTCACTTGGCTTTGGAATCA+AGG 0.339090 8.3:+75001427 MS.gene072264:CDS
GCTACTCTTTCACTTGGCTT+TGG 0.339406 8.3:+75001419 MS.gene072264:CDS
GTTAGGACTTGTCGGCATTA+AGG 0.342087 8.3:+75002985 MS.gene072264:CDS
GACAATGGTTTAACATTGTT+AGG 0.351609 8.3:+75002968 MS.gene072264:CDS
TATGGATACATTAGGTGCTT+TGG 0.352422 8.3:+75003754 MS.gene072264:CDS
TATAGCAACAGTTATAAATT+GGG 0.361053 8.3:+75003586 MS.gene072264:CDS
CACATAATGTTAGTTATAAG+AGG 0.361954 8.3:-75003839 None:intergenic
CTAATACTGAGAGGTTGAAT+TGG 0.365165 8.3:+75004134 MS.gene072264:CDS
TCAATTCGACAACAAATGTT+TGG 0.370421 8.3:+75001302 MS.gene072264:CDS
CGGAATTCTTCAACCTAATC+AGG 0.375327 8.3:+75003274 MS.gene072264:CDS
GCATTGAAAGAAGCTGATAT+TGG 0.384204 8.3:+75003485 MS.gene072264:CDS
AGCTGATATTGGACTTTCAA+TGG 0.384913 8.3:+75003496 MS.gene072264:CDS
CTCAATCGGAAAGGTTGGTT+TGG 0.386409 8.3:+75001940 MS.gene072264:CDS
TTGATCAATTGAAGAACAAA+TGG 0.386607 8.3:-75002482 None:intergenic
GTTCAATGCTTAAGACAAAA+AGG 0.388378 8.3:+75003419 MS.gene072264:CDS
GATGTGATGAATGCAGTTAT+TGG 0.388736 8.3:+75002070 MS.gene072264:CDS
AATTTGATTATGGATACATT+AGG 0.389466 8.3:+75003746 MS.gene072264:CDS
GCCGATGGATTGTTCGTAGA+TGG 0.389779 8.3:+75001686 MS.gene072264:CDS
TTGTTTGTGTTGTTGGTGTT+TGG 0.395216 8.3:-75000999 None:intergenic
GGTCATGTAGTAGCTGTAAC+TGG 0.398797 8.3:+75003440 MS.gene072264:CDS
GATGTTGTTTGTTTGAAGAT+TGG 0.403237 8.3:+75001650 MS.gene072264:CDS
AACAGCAGTTCAGTTATTAT+GGG 0.404290 8.3:+75003721 MS.gene072264:CDS
GGTGTTCACAAATTGAAATC+AGG 0.407128 8.3:+75002533 MS.gene072264:CDS
TCATCCATTAAATCCTTAGT+AGG 0.407767 8.3:-75003794 None:intergenic
TCAACCGCCGTCTTCACTCC+TGG 0.411973 8.3:-75003019 None:intergenic
GTTCTTCAATTGATCAAAGA+AGG 0.413127 8.3:+75002488 MS.gene072264:CDS
AGAGGCTTTGTTCTACCAAC+AGG 0.415046 8.3:-75003821 None:intergenic
CATGACAATCTATTGTTCTA+GGG 0.426996 8.3:+75001043 MS.gene072264:CDS
CAAACCAACCTTTCCGATTG+AGG 0.434963 8.3:-75001939 None:intergenic
GGACTTTCAATGGGTATTCA+AGG 0.435159 8.3:+75003506 MS.gene072264:CDS
GTGAATGTCAAAATGATTAC+AGG 0.438056 8.3:+75003061 MS.gene072264:CDS
ACCATTAGAAGTTTATCAAA+AGG 0.438596 8.3:-75003398 None:intergenic
AGTGTCAATGTCACAGCTAA+TGG 0.439120 8.3:-75002145 None:intergenic
AGAGGTTGAATTGGAGAGAG+TGG 0.441904 8.3:+75004143 MS.gene072264:CDS
CGAAAGCATTATTCAAGGTA+TGG 0.444612 8.3:+75002850 MS.gene072264:CDS
TACGAGAGTTTCTTGATCAA+TGG 0.446567 8.3:-75001153 None:intergenic
TCAATATTTGATATTGTTGT+TGG 0.451599 8.3:+75001626 MS.gene072264:CDS
AACTTCACAACAAAACCAAT+TGG 0.455892 8.3:-75004199 None:intergenic
TTTGTAGCGGCGGTTTCAGC+AGG 0.459320 8.3:+75003686 MS.gene072264:CDS
GAGAAGAAGAATGTGTTTGA+AGG 0.463945 8.3:+75004025 MS.gene072264:CDS
CAGAAACATGGAGGAGTTGA+AGG 0.464354 8.3:+75001209 MS.gene072264:CDS
AGAGAGTGGATTGTTTGTAT+TGG 0.469398 8.3:+75004157 MS.gene072264:CDS
TCAAAATACCACGATGGTTG+TGG 0.475860 8.3:+75002788 MS.gene072264:CDS
AAATTCGAAAGCATTATTCA+AGG 0.477862 8.3:+75002845 MS.gene072264:CDS
ACAGCTAATGGCAAACCCTC+AGG 0.478867 8.3:-75002133 None:intergenic
GACGAAGAGCTTGGAGTTGA+AGG 0.481741 8.3:+75002920 MS.gene072264:CDS
GGAGTTGCTCTCAATACAAC+TGG 0.484303 8.3:+75002509 MS.gene072264:CDS
GAATATGCACCAACTTCCAT+TGG 0.484480 8.3:-75002449 None:intergenic
ATATCAGCTTCTTTCAATGC+TGG 0.486714 8.3:-75003482 None:intergenic
GCTGATATTGGACTTTCAAT+GGG 0.486835 8.3:+75003497 MS.gene072264:CDS
TTAACATTGTTAGGACTTGT+CGG 0.492019 8.3:+75002977 MS.gene072264:CDS
CTGTTGATTCGATATTTCAC+CGG 0.495373 8.3:+75001989 MS.gene072264:CDS
GTTTGTGCTACTCTTTCACT+TGG 0.496780 8.3:+75001413 MS.gene072264:CDS
GGTTTAGAACCAATGGAAGT+TGG 0.498433 8.3:+75002440 MS.gene072264:CDS
GTTGATGAATCGAGCATGAC+CGG 0.505360 8.3:+75001722 MS.gene072264:CDS
TTGTTAACTCTTCAATTCAA+AGG 0.506553 8.3:+75003902 MS.gene072264:CDS
TCGTAGTGGGCGCCGACAAA+AGG 0.507237 8.3:+75001601 MS.gene072264:CDS
CGGTTGGTATGAACACAACA+TGG 0.507879 8.3:+75001840 MS.gene072264:CDS
AATAAACTAACATCCTCAAT+CGG 0.510354 8.3:+75001926 MS.gene072264:CDS
GTCGTCGTCGCTATCCCTGA+GGG 0.516038 8.3:+75002118 MS.gene072264:CDS
AAGAAACTCCTTTGCAAACA+AGG 0.516856 8.3:+75001900 MS.gene072264:CDS
ATCAAAGAAGGTTGGTATGA+TGG 0.518871 8.3:+75001458 MS.gene072264:CDS
GTGGTTCAAGTTTGTGAACA+AGG 0.521853 8.3:-75000955 None:intergenic
AAATCAACCACGGTGAAAGA+TGG 0.523772 8.3:-75001110 None:intergenic
AGAACAATAGATTGTCATGA+AGG 0.524303 8.3:-75001039 None:intergenic
CTCTTATAACTAACATTATG+TGG 0.531696 8.3:+75003840 MS.gene072264:CDS
CAAATTGATTTGGTTCGTAG+TGG 0.532205 8.3:+75001587 MS.gene072264:CDS
AGTAATGGTTTATCTGAGAC+TGG 0.534339 8.3:-75004226 None:intergenic
AAAGTTACCGACGAAGAGCT+TGG 0.534806 8.3:+75002911 MS.gene072264:CDS
ACAGATGAAACAGTGGTTGA+AGG 0.535678 8.3:+75003299 MS.gene072264:CDS
AACTCAAAGAAGAAAAGAAG+TGG 0.537966 8.3:+75002686 MS.gene072264:CDS
TTGGATTGGTTTAGAACCAA+TGG 0.540028 8.3:+75002433 MS.gene072264:CDS
AGAAGAAGAATGTGTTTGAA+GGG 0.540107 8.3:+75004026 MS.gene072264:CDS
GTAGTAGCTGTAACTGGAGA+TGG 0.540476 8.3:+75003446 MS.gene072264:CDS
AAAATGCTCGTTACATCGGT+TGG 0.541310 8.3:+75001824 MS.gene072264:CDS
ATTGGTGCTTCAAGTTGTGA+TGG 0.541508 8.3:+75004090 MS.gene072264:CDS
GTCTTCACTCCTGGACGACA+TGG 0.543810 8.3:-75003010 None:intergenic
CTTTCTGCGTGTGAGACTAT+GGG 0.544344 8.3:+75002217 MS.gene072264:CDS
CTTCACACACGAAGAGAGGT+TGG 0.545743 8.3:+75003337 MS.gene072264:CDS
GGCTTTGGAATCAAGGAGCA+TGG 0.547206 8.3:+75001434 MS.gene072264:CDS
ACAACACAAACAATATAAGA+TGG 0.547366 8.3:+75001009 MS.gene072264:CDS
ACATCCTCAATCGGAAAGGT+TGG 0.547400 8.3:+75001935 MS.gene072264:CDS
AAGGAGCATGGAATCAAAGA+AGG 0.549041 8.3:+75001446 MS.gene072264:CDS
GGGAATTGTTGGTATGACAT+TGG 0.555187 8.3:+75004072 MS.gene072264:CDS
TGAAGGAGAGAGAAACAAGA+TGG 0.555984 8.3:+75002937 MS.gene072264:CDS
GGGAACACAAAGACTGATAA+CGG 0.556116 8.3:+75002010 MS.gene072264:CDS
TTATTCAACCTTGTTTGCAA+AGG 0.556386 8.3:-75001908 None:intergenic
ACTCACTTTGAATCAAATGA+AGG 0.556389 8.3:+75002400 MS.gene072264:CDS
AGCATGGAATCAAAGAAGGT+TGG 0.557290 8.3:+75001450 MS.gene072264:CDS
TTATTCAATGAAGAAAATGA+TGG 0.562067 8.3:+75002171 MS.gene072264:CDS
AAATTGATTTGGTTCGTAGT+GGG 0.562240 8.3:+75001588 MS.gene072264:CDS
CTCTACATGATCGCTCTCAC+CGG 0.562804 8.3:-75001741 None:intergenic
TTGGAAAGGAGCAGCAGAGA+TGG 0.565912 8.3:+75002751 MS.gene072264:CDS
ATTAAGGATCCATGTCGTCC+AGG 0.566040 8.3:+75003001 MS.gene072264:CDS
AGTTGAGAAAATCTCTGTGA+TGG 0.570853 8.3:+75003364 MS.gene072264:CDS
GTTGAAGCATGCCAACATGC+TGG 0.573107 8.3:+75003037 MS.gene072264:CDS
AGGTGCTTTGGCTCTCGCAA+CGG 0.573690 8.3:+75003766 MS.gene072264:CDS
ATTTCAATTAACAGTGAATG+TGG 0.574758 8.3:+75003646 MS.gene072264:CDS
CTTATCAGTGCAAATAGTAG+TGG 0.574957 8.3:-75002245 None:intergenic
TCCGGAACAAAAGTTGTCGA+TGG 0.578123 8.3:+75001794 MS.gene072264:CDS
TGTTGATTCGATATTTCACC+GGG 0.582880 8.3:+75001990 MS.gene072264:CDS
TCTACGAACAATCCATCGGC+TGG 0.583270 8.3:-75001683 None:intergenic
TGTGAACAAGGGCATTGACA+TGG 0.585662 8.3:-75000943 None:intergenic
GCAACTTCACACACGAAGAG+AGG 0.586009 8.3:+75003333 MS.gene072264:CDS
CAAACTATTGCACATTGGAA+AGG 0.587059 8.3:+75002737 MS.gene072264:CDS
ACTATTTGCACTGATAAGAC+AGG 0.589952 8.3:+75002250 MS.gene072264:CDS
TGCCAAAATGCTCGTTACAT+CGG 0.594557 8.3:+75001820 MS.gene072264:CDS
ATGTCGTCCAGGAGTGAAGA+CGG 0.597901 8.3:+75003012 MS.gene072264:CDS
ATAGCAACAGTTATAAATTG+GGG 0.599943 8.3:+75003587 MS.gene072264:CDS
AGGAGAGAGAAACAAGATGG+TGG 0.604500 8.3:+75002940 MS.gene072264:CDS
TGACATTCACACCAGCATGT+TGG 0.604962 8.3:-75003048 None:intergenic
TTCAACTCCAAGCTCTTCGT+CGG 0.604998 8.3:-75002918 None:intergenic
AAAGAAGGTTGGTATGATGG+TGG 0.609959 8.3:+75001461 MS.gene072264:CDS
ATTGACACACTTCAGAAACA+TGG 0.613995 8.3:+75001197 MS.gene072264:CDS
TGGTTCAAGTTTGTGAACAA+GGG 0.619115 8.3:-75000954 None:intergenic
CAGCTAATGGCAAACCCTCA+GGG 0.620845 8.3:-75002132 None:intergenic
ACTAACATCCTCAATCGGAA+AGG 0.622770 8.3:+75001931 MS.gene072264:CDS
TCCATCTACGAACAATCCAT+CGG 0.630228 8.3:-75001687 None:intergenic
TGTTTAATGAGTTTAATGCA+AGG 0.630387 8.3:+75003996 MS.gene072264:CDS
GGTGATCAAGTACCAGCCGA+TGG 0.639660 8.3:+75001671 MS.gene072264:CDS
GGTTGGTATGAACACAACAT+GGG 0.640345 8.3:+75001841 MS.gene072264:CDS
AATGATGGCTGATCAAGCAA+TGG 0.640938 8.3:+75002186 MS.gene072264:CDS
ATAACCAAACTATTGCACAT+TGG 0.646246 8.3:+75002732 MS.gene072264:CDS
TGTCGTCGTCGCTATCCCTG+AGG 0.646842 8.3:+75002117 MS.gene072264:CDS
AAGATGGTGGTAAAAGACAA+TGG 0.652183 8.3:+75002953 MS.gene072264:CDS
TGATCAATGGTAAAAGAGTG+AGG 0.652312 8.3:-75001140 None:intergenic
TCAAAATTCCACAACCATCG+TGG 0.657262 8.3:-75002796 None:intergenic
AGAAGTTTGCTAATACTGAG+AGG 0.658673 8.3:+75004125 MS.gene072264:CDS
AATGCTTTCGAATTTCAACA+TGG 0.662441 8.3:-75002837 None:intergenic
TTATAACTAACATTATGTGG+AGG 0.663994 8.3:+75003843 MS.gene072264:CDS
AACGGAGTTAGAGAATTCAA+CGG 0.688331 8.3:+75002028 MS.gene072264:CDS
GTTGCTCTCAATACAACTGG+TGG 0.691153 8.3:+75002512 MS.gene072264:CDS
ACCTACTCCATCTTTCACCG+TGG 0.705281 8.3:+75001103 MS.gene072264:CDS
GTTGGTATGAACACAACATG+GGG 0.705560 8.3:+75001842 MS.gene072264:CDS
TCAGGACACAGATGAAACAG+TGG 0.715193 8.3:+75003292 MS.gene072264:CDS
ACCACGGTGAAAGATGGAGT+AGG 0.718242 8.3:-75001104 None:intergenic
ATGTGTTCAAAATACCACGA+TGG 0.719605 8.3:+75002782 MS.gene072264:CDS
AAAGCTATAGCATTTGAATG+CGG 0.720955 8.3:+75003254 MS.gene072264:CDS
AGGTGAAGTTAAATCAACCA+CGG 0.722311 8.3:-75001120 None:intergenic
ATCGAATCAACAGAACAACA+AGG 0.735048 8.3:-75001979 None:intergenic
GACACACTTCAGAAACATGG+AGG 0.742804 8.3:+75001200 MS.gene072264:CDS
CATTGAGAAGTGTCTCAATG+TGG 0.745193 8.3:-75000974 None:intergenic
TCGTCCAGGAGTGAAGACGG+CGG 0.774693 8.3:+75003015 MS.gene072264:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATTCAAAAAATCAAGTAA+TGG - chr8.3:75004244-75004263 None:intergenic 15.0%
!! TGGTTAATTAATAATTAGTT+AGG - chr8.3:75003188-75003207 None:intergenic 15.0%
!!! TACTTGATTTTTTGAATTTT+AGG + chr8.3:75004245-75004264 MS.gene072264:CDS 15.0%
!!! TTTAACAATTCTTATTCTTT+TGG + chr8.3:75001391-75001410 MS.gene072264:CDS 15.0%
!! AATTTGATTATGGATACATT+AGG + chr8.3:75003746-75003765 MS.gene072264:CDS 20.0%
!! CAATGATATTCAAATTGATT+TGG + chr8.3:75001577-75001596 MS.gene072264:CDS 20.0%
!! GAGTTAACAAAATAACTATT+TGG - chr8.3:75003892-75003911 None:intergenic 20.0%
!! TATAGCAACAGTTATAAATT+GGG + chr8.3:75003586-75003605 MS.gene072264:CDS 20.0%
!! TCAATATTTGATATTGTTGT+TGG + chr8.3:75001626-75001645 MS.gene072264:CDS 20.0%
!! TTATTCAATGAAGAAAATGA+TGG + chr8.3:75002171-75002190 MS.gene072264:CDS 20.0%
!!! AAATGAAAGAAACTTTTAGA+AGG - chr8.3:75001350-75001369 None:intergenic 20.0%
! AAAACCTACTAAGGATTTAA+TGG + chr8.3:75003790-75003809 MS.gene072264:CDS 25.0%
! AATAAACTAACATCCTCAAT+CGG + chr8.3:75001926-75001945 MS.gene072264:CDS 25.0%
! ACAACACAAACAATATAAGA+TGG + chr8.3:75001009-75001028 MS.gene072264:CDS 25.0%
! ACCATTAGAAGTTTATCAAA+AGG - chr8.3:75003401-75003420 None:intergenic 25.0%
! ATAGCAACAGTTATAAATTG+GGG + chr8.3:75003587-75003606 MS.gene072264:CDS 25.0%
! ATTATGGGTGAATTTGATTA+TGG + chr8.3:75003736-75003755 MS.gene072264:CDS 25.0%
! ATTTCAATTAACAGTGAATG+TGG + chr8.3:75003646-75003665 MS.gene072264:CDS 25.0%
! CACATAATGTTAGTTATAAG+AGG - chr8.3:75003842-75003861 None:intergenic 25.0%
! CTATAGCAACAGTTATAAAT+TGG + chr8.3:75003585-75003604 MS.gene072264:CDS 25.0%
! CTCTTATAACTAACATTATG+TGG + chr8.3:75003840-75003859 MS.gene072264:CDS 25.0%
! CTTAAAACTAACATTGAGTT+TGG + chr8.3:75001245-75001264 MS.gene072264:CDS 25.0%
! TAGACTCTATGTATAAATAG+AGG - chr8.3:75003132-75003151 None:intergenic 25.0%
! TCAGAGATAAAGTTAGTTAA+TGG - chr8.3:75003208-75003227 None:intergenic 25.0%
! TCTTATATTGTTTGTGTTGT+TGG - chr8.3:75001009-75001028 None:intergenic 25.0%
! TGTTTAATGAGTTTAATGCA+AGG + chr8.3:75003996-75004015 MS.gene072264:CDS 25.0%
! TTATAACTAACATTATGTGG+AGG + chr8.3:75003843-75003862 MS.gene072264:CDS 25.0%
! TTGATCAATTGAAGAACAAA+TGG - chr8.3:75002485-75002504 None:intergenic 25.0%
! TTGTTAACTCTTCAATTCAA+AGG + chr8.3:75003902-75003921 MS.gene072264:CDS 25.0%
!! CAAATATTGATACCTTTTGT+CGG - chr8.3:75001616-75001635 None:intergenic 25.0%
!! TCCTTTTGATAAACTTCTAA+TGG + chr8.3:75003397-75003416 MS.gene072264:CDS 25.0%
!! TTCAAAGGTGAGATTATTTT+TGG + chr8.3:75003917-75003936 MS.gene072264:CDS 25.0%
!! TTTGGAATTGAAAATGGATA+TGG + chr8.3:75002619-75002638 MS.gene072264:CDS 25.0%
!!! AAATTCGAAAGCATTATTCA+AGG + chr8.3:75002845-75002864 MS.gene072264:CDS 25.0%
!!! AATTTTGAAAGATCTTGACA+AGG + chr8.3:75002811-75002830 MS.gene072264:CDS 25.0%
!!! ACTTGTTATCAATTTTGTAG+CGG + chr8.3:75003673-75003692 MS.gene072264:CDS 25.0%
!!! ATTTAAGAGCAAGTTGTTTT+TGG + chr8.3:75004051-75004070 MS.gene072264:CDS 25.0%
!!! TTTAAGAGCAAGTTGTTTTT+GGG + chr8.3:75004052-75004071 MS.gene072264:CDS 25.0%
!!! TTTTGTTGTTGAAGCTTTTA+AGG + chr8.3:75001367-75001386 MS.gene072264:CDS 25.0%
AAAGCTATAGCATTTGAATG+CGG + chr8.3:75003254-75003273 MS.gene072264:CDS 30.0%
AACAGCAGTTCAGTTATTAT+GGG + chr8.3:75003721-75003740 MS.gene072264:CDS 30.0%
AACTCAAAGAAGAAAAGAAG+TGG + chr8.3:75002686-75002705 MS.gene072264:CDS 30.0%
AACTTCACAACAAAACCAAT+TGG - chr8.3:75004202-75004221 None:intergenic 30.0%
AATAACTGAACTGCTGTTAA+TGG - chr8.3:75003719-75003738 None:intergenic 30.0%
AATGCTTTCGAATTTCAACA+TGG - chr8.3:75002840-75002859 None:intergenic 30.0%
ACTCACTTTGAATCAAATGA+AGG + chr8.3:75002400-75002419 MS.gene072264:CDS 30.0%
AGAACAATAGATTGTCATGA+AGG - chr8.3:75001042-75001061 None:intergenic 30.0%
AGAAGAAGAATGTGTTTGAA+GGG + chr8.3:75004026-75004045 MS.gene072264:CDS 30.0%
ATAACCAAACTATTGCACAT+TGG + chr8.3:75002732-75002751 MS.gene072264:CDS 30.0%
CATGACAATCTATTGTTCTA+GGG + chr8.3:75001043-75001062 MS.gene072264:CDS 30.0%
GACAATGGTTTAACATTGTT+AGG + chr8.3:75002968-75002987 MS.gene072264:CDS 30.0%
GTGAATGTCAAAATGATTAC+AGG + chr8.3:75003061-75003080 MS.gene072264:CDS 30.0%
GTTCAATGCTTAAGACAAAA+AGG + chr8.3:75003419-75003438 MS.gene072264:CDS 30.0%
GTTCTTCAATTGATCAAAGA+AGG + chr8.3:75002488-75002507 MS.gene072264:CDS 30.0%
TAACAGCAGTTCAGTTATTA+TGG + chr8.3:75003720-75003739 MS.gene072264:CDS 30.0%
TCAATTCGACAACAAATGTT+TGG + chr8.3:75001302-75001321 MS.gene072264:CDS 30.0%
TCATCCATTAAATCCTTAGT+AGG - chr8.3:75003797-75003816 None:intergenic 30.0%
TCATGACAATCTATTGTTCT+AGG + chr8.3:75001042-75001061 MS.gene072264:CDS 30.0%
TGAGTTTAATGCAAGGAAAT+TGG + chr8.3:75004003-75004022 MS.gene072264:CDS 30.0%
TGTTACAAATCACATGATCA+AGG - chr8.3:75002375-75002394 None:intergenic 30.0%
TTAACATTGTTAGGACTTGT+CGG + chr8.3:75002977-75002996 MS.gene072264:CDS 30.0%
! AAATGAAGGTCACAAAGTTT+TGG + chr8.3:75002414-75002433 MS.gene072264:CDS 30.0%
! GATGTTGTTTGTTTGAAGAT+TGG + chr8.3:75001650-75001669 MS.gene072264:CDS 30.0%
! TTAATGGATGAAAAACCTGT+TGG + chr8.3:75003806-75003825 MS.gene072264:CDS 30.0%
! TTATTCAACCTTGTTTGCAA+AGG - chr8.3:75001911-75001930 None:intergenic 30.0%
! TTGATCATGTGATTTGTAAC+AGG + chr8.3:75002374-75002393 MS.gene072264:intron 30.0%
!! AAATTGATTTGGTTCGTAGT+GGG + chr8.3:75001588-75001607 MS.gene072264:CDS 30.0%
!! TGAAAGAAACTTTTAGAAGG+TGG - chr8.3:75001347-75001366 None:intergenic 30.0%
!!! AAGTTGTTTTTGGGAATTGT+TGG + chr8.3:75004061-75004080 MS.gene072264:CDS 30.0%
!!! TATTTTTGGTGTGAGTTCAA+AGG + chr8.3:75003931-75003950 MS.gene072264:CDS 30.0%
!!! TTTCATCCTTTTTTGCTTTC+CGG + chr8.3:75001776-75001795 MS.gene072264:CDS 30.0%
AACGGAGTTAGAGAATTCAA+CGG + chr8.3:75002028-75002047 MS.gene072264:CDS 35.0%
AAGAAACTCCTTTGCAAACA+AGG + chr8.3:75001900-75001919 MS.gene072264:CDS 35.0%
AGCTGATATTGGACTTTCAA+TGG + chr8.3:75003496-75003515 MS.gene072264:CDS 35.0%
AGGTGAAGTTAAATCAACCA+CGG - chr8.3:75001123-75001142 None:intergenic 35.0%
AGTTGAGAAAATCTCTGTGA+TGG + chr8.3:75003364-75003383 MS.gene072264:CDS 35.0%
ATATCAGCTTCTTTCAATGC+TGG - chr8.3:75003485-75003504 None:intergenic 35.0%
ATCGAATCAACAGAACAACA+AGG - chr8.3:75001982-75002001 None:intergenic 35.0%
ATGTGTTCAAAATACCACGA+TGG + chr8.3:75002782-75002801 MS.gene072264:CDS 35.0%
ATTGACACACTTCAGAAACA+TGG + chr8.3:75001197-75001216 MS.gene072264:CDS 35.0%
CAAACTATTGCACATTGGAA+AGG + chr8.3:75002737-75002756 MS.gene072264:CDS 35.0%
CTAACTTTATCTCTGATGAC+AGG + chr8.3:75003212-75003231 MS.gene072264:intron 35.0%
CTAATACTGAGAGGTTGAAT+TGG + chr8.3:75004134-75004153 MS.gene072264:CDS 35.0%
CTTATCAGTGCAAATAGTAG+TGG - chr8.3:75002248-75002267 None:intergenic 35.0%
CTTTCCAATGTGCAATAGTT+TGG - chr8.3:75002739-75002758 None:intergenic 35.0%
GAGAAGAAGAATGTGTTTGA+AGG + chr8.3:75004025-75004044 MS.gene072264:CDS 35.0%
GATGTGATGAATGCAGTTAT+TGG + chr8.3:75002070-75002089 MS.gene072264:CDS 35.0%
GCATTGAAAGAAGCTGATAT+TGG + chr8.3:75003485-75003504 MS.gene072264:CDS 35.0%
GCTGATATTGGACTTTCAAT+GGG + chr8.3:75003497-75003516 MS.gene072264:CDS 35.0%
GGAAAAAGCAATGCTATCTT+GGG + chr8.3:75002592-75002611 MS.gene072264:CDS 35.0%
GGTGTTCACAAATTGAAATC+AGG + chr8.3:75002533-75002552 MS.gene072264:CDS 35.0%
TACGAGAGTTTCTTGATCAA+TGG - chr8.3:75001156-75001175 None:intergenic 35.0%
TATGGATACATTAGGTGCTT+TGG + chr8.3:75003754-75003773 MS.gene072264:CDS 35.0%
TGATCAATGGTAAAAGAGTG+AGG - chr8.3:75001143-75001162 None:intergenic 35.0%
TTTGTTCCGGAAAGCAAAAA+AGG - chr8.3:75001785-75001804 None:intergenic 35.0%
! AAGATGGTGGTAAAAGACAA+TGG + chr8.3:75002953-75002972 MS.gene072264:CDS 35.0%
! ACTATTTGCACTGATAAGAC+AGG + chr8.3:75002250-75002269 MS.gene072264:CDS 35.0%
! AGTAATGGTTTATCTGAGAC+TGG - chr8.3:75004229-75004248 None:intergenic 35.0%
! TGGTTCAAGTTTGTGAACAA+GGG - chr8.3:75000957-75000976 None:intergenic 35.0%
! TGTTATCAATTTTGTAGCGG+CGG + chr8.3:75003676-75003695 MS.gene072264:CDS 35.0%
! TTGTTTGTGTTGTTGGTGTT+TGG - chr8.3:75001002-75001021 None:intergenic 35.0%
!! AGAAGTTTGCTAATACTGAG+AGG + chr8.3:75004125-75004144 MS.gene072264:CDS 35.0%
!! AGAGAGTGGATTGTTTGTAT+TGG + chr8.3:75004157-75004176 MS.gene072264:CDS 35.0%
!! ATCAAAGAAGGTTGGTATGA+TGG + chr8.3:75001458-75001477 MS.gene072264:CDS 35.0%
!! CAAATTGATTTGGTTCGTAG+TGG + chr8.3:75001587-75001606 MS.gene072264:CDS 35.0%
!! CGAAAGCATTATTCAAGGTA+TGG + chr8.3:75002850-75002869 MS.gene072264:CDS 35.0%
!! CTGTTGATTCGATATTTCAC+CGG + chr8.3:75001989-75002008 MS.gene072264:CDS 35.0%
!! GATTCTGAATTCGAGTTTTC+AGG + chr8.3:75002560-75002579 MS.gene072264:CDS 35.0%
!! TGTTGATTCGATATTTCACC+GGG + chr8.3:75001990-75002009 MS.gene072264:CDS 35.0%
!! TTGGATTGGTTTAGAACCAA+TGG + chr8.3:75002433-75002452 MS.gene072264:CDS 35.0%
!!! AAGGTCACAAAGTTTTGGAT+TGG + chr8.3:75002419-75002438 MS.gene072264:CDS 35.0%
!!! AGGTGGTTTTTTGTAAGTGT+TGG - chr8.3:75001330-75001349 None:intergenic 35.0%
!!! AGGTGTGATTTTTGGTTTCT+TGG - chr8.3:75001087-75001106 None:intergenic 35.0%
!!! GAAGTGGAGTTTTGTTAAGA+AGG + chr8.3:75002702-75002721 MS.gene072264:CDS 35.0%
!!! GGCTGTTTTGGAATTGAAAA+TGG + chr8.3:75002613-75002632 MS.gene072264:CDS 35.0%
AAAATGCTCGTTACATCGGT+TGG + chr8.3:75001824-75001843 MS.gene072264:CDS 40.0%
AAATCAACCACGGTGAAAGA+TGG - chr8.3:75001113-75001132 None:intergenic 40.0%
AATGATGGCTGATCAAGCAA+TGG + chr8.3:75002186-75002205 MS.gene072264:CDS 40.0%
ACAGATGAAACAGTGGTTGA+AGG + chr8.3:75003299-75003318 MS.gene072264:CDS 40.0%
ACTAACATCCTCAATCGGAA+AGG + chr8.3:75001931-75001950 MS.gene072264:CDS 40.0%
AGCATGGAATCAAAGAAGGT+TGG + chr8.3:75001450-75001469 MS.gene072264:CDS 40.0%
AGTGTCAATGTCACAGCTAA+TGG - chr8.3:75002148-75002167 None:intergenic 40.0%
CGGAAAAAGCAATGCTATCT+TGG + chr8.3:75002591-75002610 MS.gene072264:CDS 40.0%
CGGAATTCTTCAACCTAATC+AGG + chr8.3:75003274-75003293 MS.gene072264:CDS 40.0%
GAATATGCACCAACTTCCAT+TGG - chr8.3:75002452-75002471 None:intergenic 40.0%
GGACTTTCAATGGGTATTCA+AGG + chr8.3:75003506-75003525 MS.gene072264:CDS 40.0%
GGGAACACAAAGACTGATAA+CGG + chr8.3:75002010-75002029 MS.gene072264:CDS 40.0%
GGGAATTGTTGGTATGACAT+TGG + chr8.3:75004072-75004091 MS.gene072264:CDS 40.0%
GTTATCAGTCTTTGTGTTCC+CGG - chr8.3:75002011-75002030 None:intergenic 40.0%
GTTGGTATGAACACAACATG+GGG + chr8.3:75001842-75001861 MS.gene072264:CDS 40.0%
GTTTCATCTGTGTCCTGATT+AGG - chr8.3:75003290-75003309 None:intergenic 40.0%
TCAAAATACCACGATGGTTG+TGG + chr8.3:75002788-75002807 MS.gene072264:CDS 40.0%
TCAAAATTCCACAACCATCG+TGG - chr8.3:75002799-75002818 None:intergenic 40.0%
TCCATCTACGAACAATCCAT+CGG - chr8.3:75001690-75001709 None:intergenic 40.0%
TGAAGGAGAGAGAAACAAGA+TGG + chr8.3:75002937-75002956 MS.gene072264:CDS 40.0%
TGCCAAAATGCTCGTTACAT+CGG + chr8.3:75001820-75001839 MS.gene072264:CDS 40.0%
TTCGTCAATGTCGTTGCTTA+TGG - chr8.3:75001882-75001901 None:intergenic 40.0%
! AACCGATGTAACGAGCATTT+TGG - chr8.3:75001825-75001844 None:intergenic 40.0%
! AAGGAGCATGGAATCAAAGA+AGG + chr8.3:75001446-75001465 MS.gene072264:CDS 40.0%
! AATGCTATCTTGGGCTGTTT+TGG + chr8.3:75002601-75002620 MS.gene072264:CDS 40.0%
! GATGGAGTAGGTGTGATTTT+TGG - chr8.3:75001095-75001114 None:intergenic 40.0%
! GGTTGGTATGAACACAACAT+GGG + chr8.3:75001841-75001860 MS.gene072264:CDS 40.0%
! GGTTTAGAACCAATGGAAGT+TGG + chr8.3:75002440-75002459 MS.gene072264:CDS 40.0%
! GTGGTTCAAGTTTGTGAACA+AGG - chr8.3:75000958-75000977 None:intergenic 40.0%
! GTTTGTGCTACTCTTTCACT+TGG + chr8.3:75001413-75001432 MS.gene072264:CDS 40.0%
! TCCATCGACAACTTTTGTTC+CGG - chr8.3:75001798-75001817 None:intergenic 40.0%
!! AAAGAAGGTTGGTATGATGG+TGG + chr8.3:75001461-75001480 MS.gene072264:CDS 40.0%
!! ATTGGTGCTTCAAGTTGTGA+TGG + chr8.3:75004090-75004109 MS.gene072264:CDS 40.0%
!! CATTGAGAAGTGTCTCAATG+TGG - chr8.3:75000977-75000996 None:intergenic 40.0%
!! TTCACTTGGCTTTGGAATCA+AGG + chr8.3:75001427-75001446 MS.gene072264:CDS 40.0%
!!! GATAGCATTGCTTTTTCCGT+CGG - chr8.3:75002590-75002609 None:intergenic 40.0%
!!! TTGGTTTTGCTGCTGTTTCT+TGG + chr8.3:75004176-75004195 MS.gene072264:CDS 40.0%
AAAGTTACCGACGAAGAGCT+TGG + chr8.3:75002911-75002930 MS.gene072264:CDS 45.0%
ACATCCTCAATCGGAAAGGT+TGG + chr8.3:75001935-75001954 MS.gene072264:CDS 45.0%
ACTTTCTGCGTGTGAGACTA+TGG + chr8.3:75002216-75002235 MS.gene072264:CDS 45.0%
AGAGGTTGAATTGGAGAGAG+TGG + chr8.3:75004143-75004162 MS.gene072264:CDS 45.0%
AGGAGAGAGAAACAAGATGG+TGG + chr8.3:75002940-75002959 MS.gene072264:CDS 45.0%
ATTAAGGATCCATGTCGTCC+AGG + chr8.3:75003001-75003020 MS.gene072264:CDS 45.0%
CAAACCAACCTTTCCGATTG+AGG - chr8.3:75001942-75001961 None:intergenic 45.0%
CAGAAACATGGAGGAGTTGA+AGG + chr8.3:75001209-75001228 MS.gene072264:CDS 45.0%
CGCAACGGAAAAACCTACTA+AGG + chr8.3:75003781-75003800 MS.gene072264:CDS 45.0%
CTTTCTGCGTGTGAGACTAT+GGG + chr8.3:75002217-75002236 MS.gene072264:CDS 45.0%
GACACACTTCAGAAACATGG+AGG + chr8.3:75001200-75001219 MS.gene072264:CDS 45.0%
GCTACTCTTTCACTTGGCTT+TGG + chr8.3:75001419-75001438 MS.gene072264:CDS 45.0%
GGAGTTGCTCTCAATACAAC+TGG + chr8.3:75002509-75002528 MS.gene072264:CDS 45.0%
GGTCATGTAGTAGCTGTAAC+TGG + chr8.3:75003440-75003459 MS.gene072264:CDS 45.0%
GTAGTAGCTGTAACTGGAGA+TGG + chr8.3:75003446-75003465 MS.gene072264:CDS 45.0%
GTTAGGACTTGTCGGCATTA+AGG + chr8.3:75002985-75003004 MS.gene072264:CDS 45.0%
GTTGCTCTCAATACAACTGG+TGG + chr8.3:75002512-75002531 MS.gene072264:CDS 45.0%
TCAGGACACAGATGAAACAG+TGG + chr8.3:75003292-75003311 MS.gene072264:CDS 45.0%
TCCGGAACAAAAGTTGTCGA+TGG + chr8.3:75001794-75001813 MS.gene072264:CDS 45.0%
TGACATTCACACCAGCATGT+TGG - chr8.3:75003051-75003070 None:intergenic 45.0%
TTCAACTCCAAGCTCTTCGT+CGG - chr8.3:75002921-75002940 None:intergenic 45.0%
! CGGTTGGTATGAACACAACA+TGG + chr8.3:75001840-75001859 MS.gene072264:CDS 45.0%
! CTCAATCGGAAAGGTTGGTT+TGG + chr8.3:75001940-75001959 MS.gene072264:CDS 45.0%
! GTTGATGAATCGAGCATGAC+CGG + chr8.3:75001722-75001741 MS.gene072264:CDS 45.0%
!! AGAGGCTTTGTTCTACCAAC+AGG - chr8.3:75003824-75003843 None:intergenic 45.0%
ACAGCTAATGGCAAACCCTC+AGG - chr8.3:75002136-75002155 None:intergenic 50.0%
ACCACGGTGAAAGATGGAGT+AGG - chr8.3:75001107-75001126 None:intergenic 50.0%
ACCTACTCCATCTTTCACCG+TGG + chr8.3:75001103-75001122 MS.gene072264:CDS 50.0%
ATGTCGTCCAGGAGTGAAGA+CGG + chr8.3:75003012-75003031 MS.gene072264:CDS 50.0%
CAGCTAATGGCAAACCCTCA+GGG - chr8.3:75002135-75002154 None:intergenic 50.0%
CTCTACATGATCGCTCTCAC+CGG - chr8.3:75001744-75001763 None:intergenic 50.0%
CTTCACACACGAAGAGAGGT+TGG + chr8.3:75003337-75003356 MS.gene072264:CDS 50.0%
GACGAAGAGCTTGGAGTTGA+AGG + chr8.3:75002920-75002939 MS.gene072264:CDS 50.0%
GCAACTTCACACACGAAGAG+AGG + chr8.3:75003333-75003352 MS.gene072264:CDS 50.0%
GTTGAAGCATGCCAACATGC+TGG + chr8.3:75003037-75003056 MS.gene072264:CDS 50.0%
TCTACGAACAATCCATCGGC+TGG - chr8.3:75001686-75001705 None:intergenic 50.0%
TTGGAAAGGAGCAGCAGAGA+TGG + chr8.3:75002751-75002770 MS.gene072264:CDS 50.0%
!! GCCGATGGATTGTTCGTAGA+TGG + chr8.3:75001686-75001705 MS.gene072264:CDS 50.0%
!! GCTGCTGTTTCTTGGCCAAT+TGG + chr8.3:75004184-75004203 MS.gene072264:CDS 50.0%
!! GGCTTTGGAATCAAGGAGCA+TGG + chr8.3:75001434-75001453 MS.gene072264:CDS 50.0%
!!! CGAGTTTTCAGGTAGTCCGA+CGG + chr8.3:75002571-75002590 MS.gene072264:CDS 50.0%
GGTGATCAAGTACCAGCCGA+TGG + chr8.3:75001671-75001690 MS.gene072264:CDS 55.0%
GTCTTCACTCCTGGACGACA+TGG - chr8.3:75003013-75003032 None:intergenic 55.0%
TTTGTAGCGGCGGTTTCAGC+AGG + chr8.3:75003686-75003705 MS.gene072264:CDS 55.0%
!! AGGTGCTTTGGCTCTCGCAA+CGG + chr8.3:75003766-75003785 MS.gene072264:CDS 55.0%
GTCGTCGTCGCTATCCCTGA+GGG + chr8.3:75002118-75002137 MS.gene072264:CDS 60.0%
TCAACCGCCGTCTTCACTCC+TGG - chr8.3:75003022-75003041 None:intergenic 60.0%
TCGTCCAGGAGTGAAGACGG+CGG + chr8.3:75003015-75003034 MS.gene072264:CDS 60.0%
TGTCGTCGTCGCTATCCCTG+AGG + chr8.3:75002117-75002136 MS.gene072264:CDS 60.0%
!! TCGTAGTGGGCGCCGACAAA+AGG + chr8.3:75001601-75001620 MS.gene072264:CDS 60.0%


Chromosome Type Strat End Strand Name
chr8.3 gene 75000945 75004279 75000945 ID=MS.gene072264
chr8.3 mRNA 75000945 75004279 75000945 ID=MS.gene072264.t1;Parent=MS.gene072264
chr8.3 exon 75000945 75002271 75000945 ID=MS.gene072264.t1.exon1;Parent=MS.gene072264.t1
chr8.3 CDS 75000945 75002271 75000945 ID=cds.MS.gene072264.t1;Parent=MS.gene072264.t1
chr8.3 exon 75002396 75003082 75002396 ID=MS.gene072264.t1.exon2;Parent=MS.gene072264.t1
chr8.3 CDS 75002396 75003082 75002396 ID=cds.MS.gene072264.t1;Parent=MS.gene072264.t1
chr8.3 exon 75003234 75004279 75003234 ID=MS.gene072264.t1.exon3;Parent=MS.gene072264.t1
chr8.3 CDS 75003234 75004279 75003234 ID=cds.MS.gene072264.t1;Parent=MS.gene072264.t1
Gene Sequence

>MS.gene072264

ATGTCAATGCCCTTGTTCACAAACTTGAACCACATTGAGACACTTCTCAATGCACCAAACACCAACAACACAAACAATATAAGATGGCACAATGCCTTCATGACAATCTATTGTTCTAGGGCTTTCATGTTACATTCTACCAAGAAACCAAAAATCACACCTACTCCATCTTTCACCGTGGTTGATTTAACTTCACCTCACTCTTTTACCATTGATCAAGAAACTCTCGTAGATATTGTCAAAGAGAAAAACATTGACACACTTCAGAAACATGGAGGAGTTGAAGGTGTTGCTTCATCACTTAAAACTAACATTGAGTTTGGTATCAAAAGTCATGATGATGATTTTCAAGACATTTCAATTCGACAACAAATGTTTGGTTCCAACACTTACAAAAAACCACCTTCTAAAAGTTTCTTTCATTTTGTTGTTGAAGCTTTTAAGGATTTAACAATTCTTATTCTTTTGGTTTGTGCTACTCTTTCACTTGGCTTTGGAATCAAGGAGCATGGAATCAAAGAAGGTTGGTATGATGGTGGTAGCATTTTTCTAGCTGTTTTCATTGTTATTTCAATGTCTGCAATAAGCAACTTTAAACAAAACAAACAATTTGATAAATTGTCTCAAGTGAGCAATGATATTCAAATTGATTTGGTTCGTAGTGGGCGCCGACAAAAGGTATCAATATTTGATATTGTTGTTGGTGATGTTGTTTGTTTGAAGATTGGTGATCAAGTACCAGCCGATGGATTGTTCGTAGATGGACATTCGTTGAGAGTTGATGAATCGAGCATGACCGGTGAGAGCGATCATGTAGAGATTAATCAAAACTTTCATCCTTTTTTGCTTTCCGGAACAAAAGTTGTCGATGGATATGCCAAAATGCTCGTTACATCGGTTGGTATGAACACAACATGGGGACAAATGATGAGTTCCATAAGCAACGACATTGACGAAGAAACTCCTTTGCAAACAAGGTTGAATAAACTAACATCCTCAATCGGAAAGGTTGGTTTGGTTGTCGCATTTTTAGTCCTTGTTGTTCTGTTGATTCGATATTTCACCGGGAACACAAAGACTGATAACGGAGTTAGAGAATTCAACGGTAGAAAGACTAGTTTTGATGATGTGATGAATGCAGTTATTGGAATTATTGCTGATGCTGTTACTATTGTCGTCGTCGCTATCCCTGAGGGTTTGCCATTAGCTGTGACATTGACACTTGCTTATTCAATGAAGAAAATGATGGCTGATCAAGCAATGGTCAGAAAACTTTCTGCGTGTGAGACTATGGGATCAGCCACTACTATTTGCACTGATAAGACAGGTACTGTTTGAAATACAAAATTTAGTGATATTCTGTTAATAGATAGTTAATTTATTGATTCTTGACTTACTCTTTATACATAGAATATTTCACATACTCACCTTGATCATGTGATTTGTAACAGGTACACTCACTTTGAATCAAATGAAGGTCACAAAGTTTTGGATTGGTTTAGAACCAATGGAAGTTGGTGCATATTCAAATGTTGATCCATTTGTTCTTCAATTGATCAAAGAAGGAGTTGCTCTCAATACAACTGGTGGTGTTCACAAATTGAAATCAGGTTCTGATTCTGAATTCGAGTTTTCAGGTAGTCCGACGGAAAAAGCAATGCTATCTTGGGCTGTTTTGGAATTGAAAATGGATATGGAGCACTTGACAAAAAGCTGTTCTATTCTTCAAGTTGAGACTTTCAACTCAAAGAAGAAAAGAAGTGGAGTTTTGTTAAGAAGGAATGTCGATAACCAAACTATTGCACATTGGAAAGGAGCAGCAGAGATGGTACTAAGAATGTGTTCAAAATACCACGATGGTTGTGGAATTTTGAAAGATCTTGACAAGGAATCCATGTTGAAATTCGAAAGCATTATTCAAGGTATGGCAGCTAGTAGTCTTCGTTGCATCGCTTTAGCGTATACAAAAGTTACCGACGAAGAGCTTGGAGTTGAAGGAGAGAGAAACAAGATGGTGGTAAAAGACAATGGTTTAACATTGTTAGGACTTGTCGGCATTAAGGATCCATGTCGTCCAGGAGTGAAGACGGCGGTTGAAGCATGCCAACATGCTGGTGTGAATGTCAAAATGATTACAGGTATTACTAAAATATCTTATTTATCGATAACTTGATAATATAAAATCCTCTATTTATACATAGAGTCTATATGAAAATGATGAAGATAATAAGAATAACTAACCTAACTAATTATTAATTAACCATTAACTAACTTTATCTCTGATGACAGGTGACAATGTTTTCACTGCAAAAGCTATAGCATTTGAATGCGGAATTCTTCAACCTAATCAGGACACAGATGAAACAGTGGTTGAAGGCGAACAATTTCGCAACTTCACACACGAAGAGAGGTTGGCGAAAGTTGAGAAAATCTCTGTGATGGCAAGATCTTCTCCTTTTGATAAACTTCTAATGGTTCAATGCTTAAGACAAAAAGGTCATGTAGTAGCTGTAACTGGAGATGGAACAAATGATGCACCAGCATTGAAAGAAGCTGATATTGGACTTTCAATGGGTATTCAAGGTACTGAAGTAGCAAAAGAGAGTTCAGATATTGTTATACTAGATGACAATTTTGCATCTATAGCAACAGTTATAAATTGGGGAAGATGTGTTTACAACAACATTCAAAAATTCATTCAATTTCAATTAACAGTGAATGTGGCAGCACTTGTTATCAATTTTGTAGCGGCGGTTTCAGCAGGTGAAGTTCCATTAACAGCAGTTCAGTTATTATGGGTGAATTTGATTATGGATACATTAGGTGCTTTGGCTCTCGCAACGGAAAAACCTACTAAGGATTTAATGGATGAAAAACCTGTTGGTAGAACAAAGCCTCTTATAACTAACATTATGTGGAGGAATCTTCTGTCACAAGCTTTGTACCAAATAGTTATTTTGTTAACTCTTCAATTCAAAGGTGAGATTATTTTTGGTGTGAGTTCAAAGGTAAATGACACATTGATATTCAACACATTTGTTCTTTGTCAAGTGTTTAATGAGTTTAATGCAAGGAAATTGGAGAAGAAGAATGTGTTTGAAGGGATATTTAAGAGCAAGTTGTTTTTGGGAATTGTTGGTATGACATTGGTGCTTCAAGTTGTGATGGTTGAGTTTTTGAAGAAGTTTGCTAATACTGAGAGGTTGAATTGGAGAGAGTGGATTGTTTGTATTGGTTTTGCTGCTGTTTCTTGGCCAATTGGTTTTGTTGTGAAGTTTATACCAGTCTCAGATAAACCATTACTTGATTTTTTGAATTTTAGGAAGCGATATTGA
Protein sequence

>MS.gene072264.t1

MSMPLFTNLNHIETLLNAPNTNNTNNIRWHNAFMTIYCSRAFMLHSTKKPKITPTPSFTVVDLTSPHSFTIDQETLVDIVKEKNIDTLQKHGGVEGVASSLKTNIEFGIKSHDDDFQDISIRQQMFGSNTYKKPPSKSFFHFVVEAFKDLTILILLVCATLSLGFGIKEHGIKEGWYDGGSIFLAVFIVISMSAISNFKQNKQFDKLSQVSNDIQIDLVRSGRRQKVSIFDIVVGDVVCLKIGDQVPADGLFVDGHSLRVDESSMTGESDHVEINQNFHPFLLSGTKVVDGYAKMLVTSVGMNTTWGQMMSSISNDIDEETPLQTRLNKLTSSIGKVGLVVAFLVLVVLLIRYFTGNTKTDNGVREFNGRKTSFDDVMNAVIGIIADAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADQAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTKFWIGLEPMEVGAYSNVDPFVLQLIKEGVALNTTGGVHKLKSGSDSEFEFSGSPTEKAMLSWAVLELKMDMEHLTKSCSILQVETFNSKKKRSGVLLRRNVDNQTIAHWKGAAEMVLRMCSKYHDGCGILKDLDKESMLKFESIIQGMAASSLRCIALAYTKVTDEELGVEGERNKMVVKDNGLTLLGLVGIKDPCRPGVKTAVEACQHAGVNVKMITGDNVFTAKAIAFECGILQPNQDTDETVVEGEQFRNFTHEERLAKVEKISVMARSSPFDKLLMVQCLRQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASIATVINWGRCVYNNIQKFIQFQLTVNVAALVINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEKPTKDLMDEKPVGRTKPLITNIMWRNLLSQALYQIVILLTLQFKGEIIFGVSSKVNDTLIFNTFVLCQVFNEFNARKLEKKNVFEGIFKSKLFLGIVGMTLVLQVVMVEFLKKFANTERLNWREWIVCIGFAAVSWPIGFVVKFIPVSDKPLLDFLNFRKRY