Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072580.t1 | AFK41357.1 | 100 | 86 | 0 | 0 | 1 | 86 | 176 | 261 | 1.40E-39 | 171.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072580.t1 | Q8L9A0 | 84.9 | 86 | 13 | 0 | 1 | 86 | 146 | 231 | 3.6e-36 | 151.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072580.t1 | G7KWH0 | 100.0 | 86 | 0 | 0 | 1 | 86 | 166 | 251 | 1.0e-39 | 171.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050084 | MS.gene072580 | 0.806376 | 8.48E-50 | -1.69E-46 |
| MS.gene050085 | MS.gene072580 | 0.825652 | 4.17E-54 | -1.69E-46 |
| MS.gene050384 | MS.gene072580 | 0.807898 | 4.04E-50 | -1.69E-46 |
| MS.gene050386 | MS.gene072580 | 0.817607 | 3.02E-52 | -1.69E-46 |
| MS.gene050689 | MS.gene072580 | 0.824501 | 7.80E-54 | -1.69E-46 |
| MS.gene050838 | MS.gene072580 | 0.853467 | 2.34E-61 | -1.69E-46 |
| MS.gene051003 | MS.gene072580 | 0.823311 | 1.48E-53 | -1.69E-46 |
| MS.gene051233 | MS.gene072580 | 0.808477 | 3.04E-50 | -1.69E-46 |
| MS.gene051234 | MS.gene072580 | 0.811245 | 7.71E-51 | -1.69E-46 |
| MS.gene051343 | MS.gene072580 | 0.830156 | 3.44E-55 | -1.69E-46 |
| MS.gene051381 | MS.gene072580 | 0.810788 | 9.68E-51 | -1.69E-46 |
| MS.gene052342 | MS.gene072580 | 0.817105 | 3.92E-52 | -1.69E-46 |
| MS.gene052397 | MS.gene072580 | 0.805592 | 1.24E-49 | -1.69E-46 |
| MS.gene053058 | MS.gene072580 | 0.829338 | 5.45E-55 | -1.69E-46 |
| MS.gene056097 | MS.gene072580 | 0.808788 | 2.61E-50 | -1.69E-46 |
| MS.gene056181 | MS.gene072580 | 0.822763 | 1.99E-53 | -1.69E-46 |
| MS.gene058054 | MS.gene072580 | 0.805711 | 1.17E-49 | -1.69E-46 |
| MS.gene059007 | MS.gene072580 | 0.8044 | 2.20E-49 | -1.69E-46 |
| MS.gene059146 | MS.gene072580 | 0.831083 | 2.04E-55 | -1.69E-46 |
| MS.gene061006 | MS.gene072580 | 0.823188 | 1.58E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072580.t1 | MTR_7g111750 | 100.000 | 86 | 0 | 0 | 1 | 86 | 166 | 251 | 7.40e-58 | 179 |
| MS.gene072580.t1 | MTR_7g111750 | 100.000 | 86 | 0 | 0 | 1 | 86 | 176 | 261 | 1.24e-57 | 179 |
| MS.gene072580.t1 | MTR_2g058400 | 98.837 | 86 | 1 | 0 | 1 | 86 | 244 | 329 | 5.12e-56 | 176 |
| MS.gene072580.t1 | MTR_1g096460 | 51.163 | 86 | 42 | 0 | 1 | 86 | 98 | 183 | 1.39e-17 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene072580.t1 | AT4G30930 | 84.884 | 86 | 13 | 0 | 1 | 86 | 146 | 231 | 1.99e-39 | 131 |
| MS.gene072580.t1 | AT1G35680 | 47.674 | 86 | 45 | 0 | 1 | 86 | 106 | 191 | 1.22e-16 | 71.2 |
Find 0 sgRNAs with CRISPR-Local
Find 291 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTAAATAGGAAAAATAA+TGG | - | 51789:8396-8415 | None:intergenic | 10.0% |
| !! | AATCTTATTAAATACTTAAT+TGG | + | 51789:7060-7079 | MS.gene072580:intron | 10.0% |
| !!! | ATATCAAATTTATTTTTAAC+TGG | - | 51789:7313-7332 | None:intergenic | 10.0% |
| !!! | ATTTTTCCTATTTAATTTAA+GGG | + | 51789:8398-8417 | MS.gene072580:intron | 10.0% |
| !!! | TATTTTTCCTATTTAATTTA+AGG | + | 51789:8397-8416 | MS.gene072580:intron | 10.0% |
| !! | TTTGCTGAATTTAAATTAAA+TGG | + | 51789:7681-7700 | MS.gene072580:intron | 15.0% |
| !!! | AATACAAGTTTATTTTAACT+TGG | + | 51789:10384-10403 | MS.gene072580:intron | 15.0% |
| !!! | ATATTTTTCTTAGATAAAAG+AGG | - | 51789:10097-10116 | None:intergenic | 15.0% |
| !!! | TATTTTTCTTAGATAAAAGA+GGG | - | 51789:10096-10115 | None:intergenic | 15.0% |
| !!! | TCTTTTATCTAAGAAAAATA+TGG | + | 51789:10096-10115 | MS.gene072580:intron | 15.0% |
| !!! | TGATTTTCTAAAAAAATTAG+CGG | + | 51789:9372-9391 | MS.gene072580:intron | 15.0% |
| !!! | TTTCTATTTTCTTTTTGTTA+TGG | + | 51789:7117-7136 | MS.gene072580:intron | 15.0% |
| !!! | TTTTAAAATCTCAAGATTAT+AGG | - | 51789:9185-9204 | None:intergenic | 15.0% |
| !! | AAAAAATATGAACTTCCTAA+TGG | + | 51789:9841-9860 | MS.gene072580:intron | 20.0% |
| !! | AAAAATGTATTTATTCTCCT+TGG | + | 51789:10232-10251 | MS.gene072580:intron | 20.0% |
| !! | AAACATAGAAAAAGATATCA+AGG | - | 51789:10182-10201 | None:intergenic | 20.0% |
| !! | AGATAATATAAAACGAGTTT+AGG | + | 51789:9556-9575 | MS.gene072580:intron | 20.0% |
| !! | ATTGTTTAAAGAACTAAAAG+AGG | - | 51789:8548-8567 | None:intergenic | 20.0% |
| !! | ATTTGTATATATGAGAATAC+TGG | + | 51789:6645-6664 | MS.gene072580:intron | 20.0% |
| !! | CAAAGAAGTTTATTAAAAAG+AGG | - | 51789:10329-10348 | None:intergenic | 20.0% |
| !! | TTTGTATATATGAGAATACT+GGG | + | 51789:6646-6665 | MS.gene072580:intron | 20.0% |
| !!! | AAAAATGAGTATTGCTTTTT+AGG | - | 51789:9970-9989 | None:intergenic | 20.0% |
| !!! | AAGCAATACTCATTTTTTAT+TGG | + | 51789:9973-9992 | MS.gene072580:intron | 20.0% |
| !!! | ATAATTTTTCTATCTTTGCT+AGG | - | 51789:7743-7762 | None:intergenic | 20.0% |
| !!! | ATTTTATTAAGGAAAAACAC+TGG | - | 51789:8300-8319 | None:intergenic | 20.0% |
| !!! | CTTTTAATTTTCTCAACAAT+AGG | - | 51789:7510-7529 | None:intergenic | 20.0% |
| !!! | GTTTTCAATTTGAATATTGT+GGG | + | 51789:6882-6901 | MS.gene072580:intron | 20.0% |
| !!! | TAAGAAAAATATGGAGTTTT+GGG | + | 51789:10105-10124 | MS.gene072580:intron | 20.0% |
| !!! | TATATTGTTGTTACAGTTAA+TGG | - | 51789:8839-8858 | None:intergenic | 20.0% |
| !!! | TATGTTTTTTAAATCTCTCA+CGG | + | 51789:9264-9283 | MS.gene072580:intron | 20.0% |
| !!! | TTTTCAATTTGAATATTGTG+GGG | + | 51789:6883-6902 | MS.gene072580:intron | 20.0% |
| !!! | TTTTTGTTTCTTCTCATATA+CGG | + | 51789:10264-10283 | MS.gene072580:intron | 20.0% |
| ! | AAAAAAAATTCCATGTTGAG+TGG | + | 51789:9032-9051 | MS.gene072580:intron | 25.0% |
| ! | AAAATGCAATTAACAGTCTT+TGG | - | 51789:7632-7651 | None:intergenic | 25.0% |
| ! | AAAGAATTGTGTACAGAATA+TGG | + | 51789:8001-8020 | MS.gene072580:intron | 25.0% |
| ! | AACTCTTCGTATTGTATATT+TGG | + | 51789:9658-9677 | MS.gene072580:intron | 25.0% |
| ! | AAGAATTGTGTACAGAATAT+GGG | + | 51789:8002-8021 | MS.gene072580:intron | 25.0% |
| ! | AGAAGTTTATTAAAAAGAGG+AGG | - | 51789:10326-10345 | None:intergenic | 25.0% |
| ! | AGACATGTAAGATTATTAAG+AGG | + | 51789:9688-9707 | MS.gene072580:intron | 25.0% |
| ! | ATAAGTCAAACTATTAAGAC+CGG | + | 51789:6844-6863 | MS.gene072580:intron | 25.0% |
| ! | ATGAAACATAAAACTGAAAG+AGG | - | 51789:7398-7417 | None:intergenic | 25.0% |
| ! | CAAAATACTTCGCAAATAAA+AGG | - | 51789:6619-6638 | None:intergenic | 25.0% |
| ! | GAAAACATATTATCTATGAC+TGG | + | 51789:7954-7973 | MS.gene072580:intron | 25.0% |
| ! | TACAGGGTATAAAAAAATTG+AGG | + | 51789:10009-10028 | MS.gene072580:intron | 25.0% |
| ! | TCAAAAGATGTAGATGATTA+AGG | + | 51789:8616-8635 | MS.gene072580:intron | 25.0% |
| ! | TGAAACATAAAACTGAAAGA+GGG | - | 51789:7397-7416 | None:intergenic | 25.0% |
| ! | TGAAATAAAGCTACACAAAA+TGG | - | 51789:6966-6985 | None:intergenic | 25.0% |
| ! | TTCAGTGTAATTATATGTGT+CGG | - | 51789:9347-9366 | None:intergenic | 25.0% |
| ! | TTTCATCTTTATCCTGTAAA+AGG | + | 51789:10359-10378 | MS.gene072580:intron | 25.0% |
| !! | AAACCATTTAAATCTAAAGC+CGG | - | 51789:6866-6885 | None:intergenic | 25.0% |
| !! | AAGAAAAATATGGAGTTTTG+GGG | + | 51789:10106-10125 | MS.gene072580:intron | 25.0% |
| !! | AATCATCTACATCTTTTGAT+TGG | - | 51789:8615-8634 | None:intergenic | 25.0% |
| !! | AATTCCTCGACATTTTATTA+AGG | - | 51789:8311-8330 | None:intergenic | 25.0% |
| !! | ATATTGCAGCATATTTCTAT+TGG | + | 51789:7023-7042 | MS.gene072580:intron | 25.0% |
| !! | ATCAATTTAAAGTGAGCAAT+GGG | + | 51789:6536-6555 | MS.gene072580:CDS | 25.0% |
| !! | ATTATCTAGAGTAGATAATG+TGG | + | 51789:9725-9744 | MS.gene072580:intron | 25.0% |
| !! | ATTGGCTTACGATTAAATTA+AGG | - | 51789:8597-8616 | None:intergenic | 25.0% |
| !! | CTAAGAAAAATATGGAGTTT+TGG | + | 51789:10104-10123 | MS.gene072580:intron | 25.0% |
| !! | GAATTTAAGAAGGAACATTT+TGG | + | 51789:7923-7942 | MS.gene072580:intron | 25.0% |
| !! | GGTTTTCAATTTGAATATTG+TGG | + | 51789:6881-6900 | MS.gene072580:intron | 25.0% |
| !! | TACATAGTGTATCTAAAACT+AGG | - | 51789:6997-7016 | None:intergenic | 25.0% |
| !! | TTTTCCTTAATAAAATGTCG+AGG | + | 51789:8304-8323 | MS.gene072580:intron | 25.0% |
| !!! | AAACATTCCATTGCATTTTT+TGG | + | 51789:7160-7179 | MS.gene072580:intron | 25.0% |
| !!! | AAGTTTATTTTAACTTGGAG+GGG | + | 51789:10389-10408 | MS.gene072580:intron | 25.0% |
| !!! | ACAAGTTTATTTTAACTTGG+AGG | + | 51789:10387-10406 | MS.gene072580:intron | 25.0% |
| !!! | ATACGTTTTGATTTTATCAC+TGG | - | 51789:9518-9537 | None:intergenic | 25.0% |
| !!! | CAAGTTTATTTTAACTTGGA+GGG | + | 51789:10388-10407 | MS.gene072580:intron | 25.0% |
| !!! | CAATACTCATTTTTTATTGG+AGG | + | 51789:9976-9995 | MS.gene072580:intron | 25.0% |
| !!! | CTAATTTTGAGAGTAGAAAT+GGG | + | 51789:7347-7366 | MS.gene072580:intron | 25.0% |
| !!! | CTTTTATTTGCGAAGTATTT+TGG | + | 51789:6617-6636 | MS.gene072580:intron | 25.0% |
| !!! | GAATCTTGTTTTAAGGAATT+TGG | + | 51789:6753-6772 | MS.gene072580:intron | 25.0% |
| !!! | TCTAATTTTGAGAGTAGAAA+TGG | + | 51789:7346-7365 | MS.gene072580:intron | 25.0% |
| AACAATATAAGAGAGAACAG+AGG | + | 51789:8850-8869 | MS.gene072580:intron | 30.0% | |
| AAGGAAAAACACTGGAAAAT+AGG | - | 51789:8292-8311 | None:intergenic | 30.0% | |
| AATGGACAAGCTATCATAAT+TGG | + | 51789:9859-9878 | MS.gene072580:intron | 30.0% | |
| ACTAGATGAACTATTTCCTA+AGG | + | 51789:10288-10307 | MS.gene072580:intron | 30.0% | |
| AGGAAAAACACTGGAAAATA+GGG | - | 51789:8291-8310 | None:intergenic | 30.0% | |
| AGTCAGTTGTAATATTGAAG+TGG | + | 51789:8245-8264 | MS.gene072580:intron | 30.0% | |
| ATAACTGTATAACCTGGAAT+GGG | + | 51789:8088-8107 | MS.gene072580:intron | 30.0% | |
| ATGGACAAGCTATCATAATT+GGG | + | 51789:9860-9879 | MS.gene072580:intron | 30.0% | |
| ATTCCAGGTTATACAGTTAT+CGG | - | 51789:8088-8107 | None:intergenic | 30.0% | |
| ATTGTGTTCAGAATTCCAAA+TGG | + | 51789:8990-9009 | MS.gene072580:intron | 30.0% | |
| CAGTTAAACATAAAACAACG+TGG | + | 51789:9132-9151 | MS.gene072580:intron | 30.0% | |
| CCACATCATAATTAAGATCA+CGG | - | 51789:7892-7911 | None:intergenic | 30.0% | |
| GAGGGTAATTAAATAGTTAG+AGG | + | 51789:6805-6824 | MS.gene072580:intron | 30.0% | |
| GCATGACCCTTAAATTAAAT+AGG | - | 51789:8407-8426 | None:intergenic | 30.0% | |
| GTGAATACGTAAGACAAATA+AGG | + | 51789:6677-6696 | MS.gene072580:intron | 30.0% | |
| TAAAGTTCAAGAAAGAAGAG+TGG | + | 51789:7774-7793 | MS.gene072580:intron | 30.0% | |
| TACGTAAGACAAATAAGGAT+TGG | + | 51789:6682-6701 | MS.gene072580:intron | 30.0% | |
| TATATATGAGAATACTGGGA+TGG | + | 51789:6650-6669 | MS.gene072580:intron | 30.0% | |
| TATGGGAAACATGAATATGT+AGG | + | 51789:8019-8038 | MS.gene072580:intron | 30.0% | |
| TATTGAAGTGGTAGAATTAG+TGG | + | 51789:8257-8276 | MS.gene072580:intron | 30.0% | |
| TCCAATATGATTGCAATGAT+AGG | - | 51789:7454-7473 | None:intergenic | 30.0% | |
| TCCTATCATTGCAATCATAT+TGG | + | 51789:7450-7469 | MS.gene072580:intron | 30.0% | |
| TCTAAAAAAATTAGCGGTGT+CGG | + | 51789:9378-9397 | MS.gene072580:intron | 30.0% | |
| TTAATGGTTATCATCTCCTT+AGG | - | 51789:8823-8842 | None:intergenic | 30.0% | |
| TTCTTTAAACAATGCCTCAA+GGG | + | 51789:8555-8574 | MS.gene072580:intron | 30.0% | |
| ! | AACTTGTATTCTCCTTTTAC+AGG | - | 51789:10374-10393 | None:intergenic | 30.0% |
| ! | ATATTATCTATGACTGGTCA+TGG | + | 51789:7960-7979 | MS.gene072580:intron | 30.0% |
| ! | ATGGTTGTTTATCTCAGTTT+TGG | - | 51789:7842-7861 | None:intergenic | 30.0% |
| ! | ATTATGATAGCTTGTCCATT+AGG | - | 51789:9859-9878 | None:intergenic | 30.0% |
| ! | ATTTTGCGAAGTGAATGATA+AGG | + | 51789:6585-6604 | MS.gene072580:CDS | 30.0% |
| ! | CATCAATTTAAAGTGAGCAA+TGG | + | 51789:6535-6554 | MS.gene072580:CDS | 30.0% |
| ! | TCAATTTAAAGTGAGCAATG+GGG | + | 51789:6537-6556 | MS.gene072580:CDS | 30.0% |
| ! | TTCGTATTGTATATTTGGTG+AGG | + | 51789:9663-9682 | MS.gene072580:intron | 30.0% |
| !! | AAATTGAGGTTTTAGCAAGT+TGG | - | 51789:9078-9097 | None:intergenic | 30.0% |
| !! | AACTTGCTAAAACCTCAATT+TGG | + | 51789:9077-9096 | MS.gene072580:intron | 30.0% |
| !! | CATTGTTTTGTCTTTTGTCT+AGG | - | 51789:8187-8206 | None:intergenic | 30.0% |
| !! | CGTTGTTTTATGTTTAACTG+AGG | - | 51789:9132-9151 | None:intergenic | 30.0% |
| !!! | GATGGTAGAATCTTGTTTTA+AGG | + | 51789:6746-6765 | MS.gene072580:intron | 30.0% |
| AAACCGATAACTGTATAACC+TGG | + | 51789:8082-8101 | MS.gene072580:intron | 35.0% | |
| AACAAAAAACATCACGACCA+AGG | - | 51789:10252-10271 | None:intergenic | 35.0% | |
| AAGAATTACCGAAGAACCAA+AGG | + | 51789:10534-10553 | MS.gene072580:CDS | 35.0% | |
| AAGCTCTTGTTCATAATCCA+AGG | - | 51789:9791-9810 | None:intergenic | 35.0% | |
| AAGTAAGTAGGTGAAATGGA+GGG | + | 51789:6787-6806 | MS.gene072580:intron | 35.0% | |
| ACTTCCATTCCAATCATAGA+TGG | - | 51789:9922-9941 | None:intergenic | 35.0% | |
| AGAATTACCGAAGAACCAAA+GGG | + | 51789:10535-10554 | MS.gene072580:CDS | 35.0% | |
| AGGAGTAAGTCAGTTATTGT+AGG | - | 51789:8768-8787 | None:intergenic | 35.0% | |
| ATTCCTCAAACAATGCACTT+AGG | - | 51789:8440-8459 | None:intergenic | 35.0% | |
| ATTTCACCTACTTACTTAGC+GGG | - | 51789:6784-6803 | None:intergenic | 35.0% | |
| CATTTCACCTACTTACTTAG+CGG | - | 51789:6785-6804 | None:intergenic | 35.0% | |
| CCGTGATCTTAATTATGATG+TGG | + | 51789:7889-7908 | MS.gene072580:intron | 35.0% | |
| CTGAACAAAGTTCTATTGCT+TGG | + | 51789:7199-7218 | MS.gene072580:CDS | 35.0% | |
| GAAGATGTGTTGCAATTTAG+GGG | - | 51789:7870-7889 | None:intergenic | 35.0% | |
| GAGGATAATAGATCATCCTT+AGG | - | 51789:10307-10326 | None:intergenic | 35.0% | |
| GATAACTGTATAACCTGGAA+TGG | + | 51789:8087-8106 | MS.gene072580:intron | 35.0% | |
| GATACGTCAAAGAGAAAATC+AGG | + | 51789:6704-6723 | MS.gene072580:intron | 35.0% | |
| GCAATGGAATGTTTAATTGC+TGG | - | 51789:7154-7173 | None:intergenic | 35.0% | |
| GGAAGATGTGTTGCAATTTA+GGG | - | 51789:7871-7890 | None:intergenic | 35.0% | |
| GTTCTTTAAACAATGCCTCA+AGG | + | 51789:8554-8573 | MS.gene072580:intron | 35.0% | |
| TAAGTAAGTAGGTGAAATGG+AGG | + | 51789:6786-6805 | MS.gene072580:intron | 35.0% | |
| TACAAGAGAGGAGCTAAAAA+AGG | + | 51789:8042-8061 | MS.gene072580:intron | 35.0% | |
| TGAATATGTAGGTACAAGAG+AGG | + | 51789:8030-8049 | MS.gene072580:intron | 35.0% | |
| TGCTGGAATGGAGATATTAA+GGG | + | 51789:9942-9961 | MS.gene072580:intron | 35.0% | |
| TGGACAAGCTATCATAATTG+GGG | + | 51789:9861-9880 | MS.gene072580:intron | 35.0% | |
| TGGAGGATACTATTACTACA+GGG | + | 51789:9993-10012 | MS.gene072580:intron | 35.0% | |
| TGTTCCTTCTTAAATTCCCT+AGG | - | 51789:7920-7939 | None:intergenic | 35.0% | |
| TTCCTCAAACAATGCACTTA+GGG | - | 51789:8439-8458 | None:intergenic | 35.0% | |
| TTCTTAGATAAAAGAGGGCA+GGG | - | 51789:10091-10110 | None:intergenic | 35.0% | |
| TTGCAATTTAGGGGTTTACA+TGG | - | 51789:7861-7880 | None:intergenic | 35.0% | |
| TTGCTGGAATGGAGATATTA+AGG | + | 51789:9941-9960 | MS.gene072580:intron | 35.0% | |
| TTGGAGGATACTATTACTAC+AGG | + | 51789:9992-10011 | MS.gene072580:intron | 35.0% | |
| TTGTCTGTATTACTTACAGC+TGG | - | 51789:8361-8380 | None:intergenic | 35.0% | |
| TTTCCTTCTACTCCAAATTG+AGG | - | 51789:9092-9111 | None:intergenic | 35.0% | |
| TTTCTTAGATAAAAGAGGGC+AGG | - | 51789:10092-10111 | None:intergenic | 35.0% | |
| ! | AAACCTCAATTTGGAGTAGA+AGG | + | 51789:9086-9105 | MS.gene072580:intron | 35.0% |
| ! | ACTCATTTTCCCCTTATATC+AGG | + | 51789:10470-10489 | MS.gene072580:intron | 35.0% |
| ! | ATGTCATTTAGTAGCACTTC+TGG | - | 51789:7483-7502 | None:intergenic | 35.0% |
| ! | CGAATGAAGACTCTTTTTGA+AGG | - | 51789:9588-9607 | None:intergenic | 35.0% |
| ! | GTAGACATGATAATGACCTA+AGG | + | 51789:8804-8823 | MS.gene072580:intron | 35.0% |
| ! | GTTTTCTTTACCTAGTTCGA+AGG | - | 51789:7610-7629 | None:intergenic | 35.0% |
| ! | TCGATGTGTTCTTTTGGATT+GGG | - | 51789:8745-8764 | None:intergenic | 35.0% |
| !! | AGACCGGCTTTAGATTTAAA+TGG | + | 51789:6860-6879 | MS.gene072580:intron | 35.0% |
| !! | GAAACTTGTTAGAAGTAAGC+AGG | + | 51789:8879-8898 | MS.gene072580:intron | 35.0% |
| !! | GGGATTACTTTAGAATAGAG+TGG | + | 51789:7367-7386 | MS.gene072580:intron | 35.0% |
| !! | GTGTAAGGATTGATTTGAAG+TGG | + | 51789:10411-10430 | MS.gene072580:intron | 35.0% |
| !! | TTTTGGTTGTTCTTCCATCT+TGG | - | 51789:7825-7844 | None:intergenic | 35.0% |
| !!! | TGTTTGGGAACTGCTTTTTT+GGG | - | 51789:8675-8694 | None:intergenic | 35.0% |
| AAACAACGACAAGGTAGACT+TGG | - | 51789:6925-6944 | None:intergenic | 40.0% | |
| AATATTGCGACCTTCGAACT+AGG | + | 51789:7597-7616 | MS.gene072580:intron | 40.0% | |
| ACGTCAAAGAGAAAATCAGG+TGG | + | 51789:6707-6726 | MS.gene072580:intron | 40.0% | |
| AGACAATGGAGTTCCTGTTT+GGG | - | 51789:8690-8709 | None:intergenic | 40.0% | |
| ATGATTGGAATGGAAGTTGC+TGG | + | 51789:9925-9944 | MS.gene072580:intron | 40.0% | |
| ATTATGATGTGGTGTAGCCT+AGG | + | 51789:7900-7919 | MS.gene072580:intron | 40.0% | |
| CAAAAAAGCAGTTCCCAAAC+AGG | + | 51789:8674-8693 | MS.gene072580:intron | 40.0% | |
| CAATCATAGATGGCTGGAAA+AGG | - | 51789:9912-9931 | None:intergenic | 40.0% | |
| CAGTGAGCCAAAAAATGCAA+TGG | - | 51789:7170-7189 | None:intergenic | 40.0% | |
| CATCTAGTGCCTGATATAAG+GGG | - | 51789:10482-10501 | None:intergenic | 40.0% | |
| CATGGTAGAACAGTACAAGA+AGG | + | 51789:7978-7997 | MS.gene072580:intron | 40.0% | |
| CGCTAAGTAAGTAGGTGAAA+TGG | + | 51789:6783-6802 | MS.gene072580:intron | 40.0% | |
| CGGAAGATGTGTTGCAATTT+AGG | - | 51789:7872-7891 | None:intergenic | 40.0% | |
| CTACCTTGTGTTAGATCACA+TGG | + | 51789:8114-8133 | MS.gene072580:intron | 40.0% | |
| CTGGAATGGAGATATTAAGG+GGG | + | 51789:9944-9963 | MS.gene072580:intron | 40.0% | |
| GAAACAACCAAGATAGAACC+AGG | + | 51789:8936-8955 | MS.gene072580:intron | 40.0% | |
| GAAGTGAATGATAAGGTGAG+TGG | + | 51789:6592-6611 | MS.gene072580:intron | 40.0% | |
| GCATCTAGTGCCTGATATAA+GGG | - | 51789:10483-10502 | None:intergenic | 40.0% | |
| GCTGGAATGGAGATATTAAG+GGG | + | 51789:9943-9962 | MS.gene072580:intron | 40.0% | |
| GCTGTACAAAAACAACGACA+AGG | - | 51789:6934-6953 | None:intergenic | 40.0% | |
| GTAGCCTAGGGAATTTAAGA+AGG | + | 51789:7913-7932 | MS.gene072580:intron | 40.0% | |
| GTCTGTCTACATCTACTAAC+AGG | + | 51789:8638-8657 | MS.gene072580:intron | 40.0% | |
| GTTCAGAATTCCAAATGGAC+TGG | + | 51789:8995-9014 | MS.gene072580:intron | 40.0% | |
| TCAGAGGCTAAACTTGCAAT+AGG | - | 51789:8155-8174 | None:intergenic | 40.0% | |
| TGACCATGTGATCTAACACA+AGG | - | 51789:8120-8139 | None:intergenic | 40.0% | |
| TGCCAACAATTGTCTGACTA+GGG | - | 51789:7228-7247 | None:intergenic | 40.0% | |
| TGTTAGATCACATGGTCACT+GGG | + | 51789:8122-8141 | MS.gene072580:intron | 40.0% | |
| TTATGATGTGGTGTAGCCTA+GGG | + | 51789:7901-7920 | MS.gene072580:intron | 40.0% | |
| TTCCCTAAGTGCATTGTTTG+AGG | + | 51789:8434-8453 | MS.gene072580:intron | 40.0% | |
| TTGCTTCAGTAAATACGCGT+AGG | - | 51789:9627-9646 | None:intergenic | 40.0% | |
| ! | CTTTTCCAGCCATCTATGAT+TGG | + | 51789:9910-9929 | MS.gene072580:intron | 40.0% |
| ! | GTCGATGTGTTCTTTTGGAT+TGG | - | 51789:8746-8765 | None:intergenic | 40.0% |
| ! | TGTAGGTCGATGTGTTCTTT+TGG | - | 51789:8751-8770 | None:intergenic | 40.0% |
| ! | TTCTTCCATCTTGGAAGTGT+TGG | - | 51789:7816-7835 | None:intergenic | 40.0% |
| !! | ATGTGTTCTTTTGGATTGGG+AGG | - | 51789:8742-8761 | None:intergenic | 40.0% |
| !! | TGACTTTCCTGGTTCTATCT+TGG | - | 51789:8946-8965 | None:intergenic | 40.0% |
| !! | TGTGTTCTTTTGGATTGGGA+GGG | - | 51789:8741-8760 | None:intergenic | 40.0% |
| !!! | CTGTTTGGGAACTGCTTTTT+TGG | - | 51789:8676-8695 | None:intergenic | 40.0% |
| !!! | TTTTAACTTGGAGGGGTGTA+AGG | + | 51789:10396-10415 | MS.gene072580:intron | 40.0% |
| AAAATTGAGGCCCATCCTTG+AGG | + | 51789:10022-10041 | MS.gene072580:intron | 45.0% | |
| AAATTGAGGCCCATCCTTGA+GGG | + | 51789:10023-10042 | MS.gene072580:intron | 45.0% | |
| AAGAACCAGCATGACTTTCC+TGG | - | 51789:8957-8976 | None:intergenic | 45.0% | |
| AATGCTAACAAGTGCCCTTG+AGG | - | 51789:8572-8591 | None:intergenic | 45.0% | |
| AGAAAATCAGGTGGCACGTA+TGG | + | 51789:6716-6735 | MS.gene072580:intron | 45.0% | |
| AGACTCTTTGCCCTCTTTCA+GGG | + | 51789:9447-9466 | MS.gene072580:intron | 45.0% | |
| AGCCTCTCAACATATCTGCA+AGG | - | 51789:9222-9241 | None:intergenic | 45.0% | |
| AGCTGTTCATGCTGTTGTTG+AGG | + | 51789:7267-7286 | MS.gene072580:CDS | 45.0% | |
| AGGAACTATGCGTCCATCAT+GGG | + | 51789:8899-8918 | MS.gene072580:intron | 45.0% | |
| ATATCAGGCACTAGATGCGA+AGG | + | 51789:10485-10504 | MS.gene072580:intron | 45.0% | |
| ATCCAAGGCAACAAGAACAG+AGG | - | 51789:9776-9795 | None:intergenic | 45.0% | |
| ATGGCTGGAAAAGGACTTCT+AGG | - | 51789:9903-9922 | None:intergenic | 45.0% | |
| CCAGCCATCTATGATTGGAA+TGG | + | 51789:9915-9934 | MS.gene072580:intron | 45.0% | |
| CCATTCCAATCATAGATGGC+TGG | - | 51789:9918-9937 | None:intergenic | 45.0% | |
| CGCATCTAGTGCCTGATATA+AGG | - | 51789:10484-10503 | None:intergenic | 45.0% | |
| CTATCATAATTGGGGCTGAG+AGG | + | 51789:9869-9888 | MS.gene072580:intron | 45.0% | |
| CTGCCAACAATTGTCTGACT+AGG | - | 51789:7229-7248 | None:intergenic | 45.0% | |
| GAAATTGAAGCTGCCCATGA+TGG | - | 51789:8915-8934 | None:intergenic | 45.0% | |
| GAGACAATGGAGTTCCTGTT+TGG | - | 51789:8691-8710 | None:intergenic | 45.0% | |
| GAGTCTATGAAGCACGGATA+CGG | - | 51789:9433-9452 | None:intergenic | 45.0% | |
| GCCAACAATTGTCTGACTAG+GGG | - | 51789:7227-7246 | None:intergenic | 45.0% | |
| GCCTCTCAACATATCTGCAA+GGG | - | 51789:9221-9240 | None:intergenic | 45.0% | |
| GGAAAAGGACTTCTAGGCAA+CGG | - | 51789:9897-9916 | None:intergenic | 45.0% | |
| GGCAAAGAGTCTATGAAGCA+CGG | - | 51789:9439-9458 | None:intergenic | 45.0% | |
| GGCACGTATGGTACAAAAGA+TGG | + | 51789:6728-6747 | MS.gene072580:intron | 45.0% | |
| GTGTTAGATCACATGGTCAC+TGG | + | 51789:8121-8140 | MS.gene072580:intron | 45.0% | |
| TAAGAGAGAACAGAGGCAGA+TGG | + | 51789:8857-8876 | MS.gene072580:intron | 45.0% | |
| TAGAACCAGGAAAGTCATGC+TGG | + | 51789:8949-8968 | MS.gene072580:intron | 45.0% | |
| TAGACTCTTTGCCCTCTTTC+AGG | + | 51789:9446-9465 | MS.gene072580:intron | 45.0% | |
| TCCCCTAGTCAGACAATTGT+TGG | + | 51789:7223-7242 | MS.gene072580:CDS | 45.0% | |
| TCCCTTGCAGATATGTTGAG+AGG | + | 51789:9217-9236 | MS.gene072580:intron | 45.0% | |
| TCTCAGTGCCAGAATCATGT+AGG | + | 51789:8707-8726 | MS.gene072580:intron | 45.0% | |
| TGCATCCAACACTTCCAAGA+TGG | + | 51789:7808-7827 | MS.gene072580:intron | 45.0% | |
| TGGAATGGAAGTTGCTGGAA+TGG | + | 51789:9930-9949 | MS.gene072580:intron | 45.0% | |
| TGGTATAGATCAGTCCAGTC+TGG | - | 51789:9058-9077 | None:intergenic | 45.0% | |
| ! | GACAAGGTAGACTTGGTACA+TGG | - | 51789:6918-6937 | None:intergenic | 45.0% |
| ! | TGATTCTGGCACTGAGACAA+TGG | - | 51789:8704-8723 | None:intergenic | 45.0% |
| ! | TGGTTGGTCCTACATGATTC+TGG | - | 51789:8718-8737 | None:intergenic | 45.0% |
| !! | AGGAAAGTCATGCTGGTTCT+TGG | + | 51789:8956-8975 | MS.gene072580:intron | 45.0% |
| !! | GTCTAGGTTTTTCAGCTCAG+AGG | - | 51789:8171-8190 | None:intergenic | 45.0% |
| !! | TATATGTGTCGGTGTCGTGT+CGG | - | 51789:9336-9355 | None:intergenic | 45.0% |
| AATCTCTCACGGACACTCCT+CGG | + | 51789:9275-9294 | MS.gene072580:intron | 50.0% | |
| ACAAGGTAGAGTCCCATTCC+AGG | - | 51789:8103-8122 | None:intergenic | 50.0% | |
| ACAGCATGAACAGCTCCATC+CGG | - | 51789:7262-7281 | None:intergenic | 50.0% | |
| ATGAAGCACGGATACGGACA+CGG | - | 51789:9427-9446 | None:intergenic | 50.0% | |
| CAAGGCAACAAGAACAGAGG+TGG | - | 51789:9773-9792 | None:intergenic | 50.0% | |
| CACCTCTGTTCTTGTTGCCT+TGG | + | 51789:9771-9790 | MS.gene072580:intron | 50.0% | |
| CAGGAACTATGCGTCCATCA+TGG | + | 51789:8898-8917 | MS.gene072580:intron | 50.0% | |
| ! | ACGCGTAGGAAGTCTCGTTT+TGG | - | 51789:9613-9632 | None:intergenic | 50.0% |
| !! | GACGATGCCCTTTGGTTCTT+CGG | - | 51789:10545-10564 | None:intergenic | 50.0% |
| !! | GTTCTTTTGGATTGGGAGGG+TGG | - | 51789:8738-8757 | None:intergenic | 50.0% |
| !! | TTCCAAATGGACTGGCTGAG+AGG | + | 51789:9003-9022 | MS.gene072580:intron | 50.0% |
| !! | TTTTGGATTGGGAGGGTGGT+TGG | - | 51789:8734-8753 | None:intergenic | 50.0% |
| AACAGCTCCATCCGGCACAA+TGG | - | 51789:7254-7273 | None:intergenic | 55.0% | |
| ACAGCTCCATCCGGCACAAT+GGG | - | 51789:7253-7272 | None:intergenic | 55.0% | |
| AGCCTCCGAATTCTCAGGGA+CGG | - | 51789:9473-9492 | None:intergenic | 55.0% | |
| CATGACACGTGTCAGACACG+GGG | - | 51789:9312-9331 | None:intergenic | 55.0% | |
| CCATGACACGTGTCAGACAC+GGG | - | 51789:9313-9332 | None:intergenic | 55.0% | |
| GACCTCTCAGCCAGTCCATT+TGG | - | 51789:9008-9027 | None:intergenic | 55.0% | |
| GACTTACTCCTGCAGCACAC+AGG | + | 51789:8777-8796 | MS.gene072580:intron | 55.0% | |
| GAGACGCCCGCTAAGTAAGT+AGG | + | 51789:6775-6794 | MS.gene072580:intron | 55.0% | |
| GCAGACAGCTCAAACGAGCT+GGG | - | 51789:10052-10071 | None:intergenic | 55.0% | |
| GCCATGACACGTGTCAGACA+CGG | - | 51789:9314-9333 | None:intergenic | 55.0% | |
| TCACGGACACTCCTCGGATA+AGG | + | 51789:9281-9300 | MS.gene072580:intron | 55.0% | |
| TCCAGTCTGGCCACTCAACA+TGG | - | 51789:9045-9064 | None:intergenic | 55.0% | |
| TCCATGTTGAGTGGCCAGAC+TGG | + | 51789:9041-9060 | MS.gene072580:intron | 55.0% | |
| TCCCTGAGAATTCGGAGGCT+CGG | + | 51789:9473-9492 | MS.gene072580:intron | 55.0% | |
| TGCAGACAGCTCAAACGAGC+TGG | - | 51789:10053-10072 | None:intergenic | 55.0% | |
| TGTTGGCAGACCCATTGTGC+CGG | + | 51789:7240-7259 | MS.gene072580:CDS | 55.0% | |
| ACGGATACGGACACGGACAC+CGG | - | 51789:9420-9439 | None:intergenic | 60.0% | |
| AGAATTCGGAGGCTCGGCTC+AGG | + | 51789:9479-9498 | MS.gene072580:intron | 60.0% | |
| AGCCGAGCCTCCGAATTCTC+AGG | - | 51789:9478-9497 | None:intergenic | 60.0% | |
| CAGGGCCGTCCCTGAGAATT+CGG | + | 51789:9465-9484 | MS.gene072580:intron | 60.0% | |
| CCCGTGTCTGACACGTGTCA+TGG | + | 51789:9310-9329 | MS.gene072580:intron | 60.0% | |
| CGGTGTGTCAGTGTCGTGTC+CGG | + | 51789:9398-9417 | MS.gene072580:intron | 60.0% | |
| CTACAGTGCCTGTGTGCTGC+AGG | - | 51789:8788-8807 | None:intergenic | 60.0% | |
| GAATTCGGAGGCTCGGCTCA+GGG | + | 51789:9480-9499 | MS.gene072580:intron | 60.0% | |
| GCCGAGCCTCCGAATTCTCA+GGG | - | 51789:9477-9496 | None:intergenic | 60.0% | |
| TCAGGGACGGCCCTGAAAGA+GGG | - | 51789:9460-9479 | None:intergenic | 60.0% | |
| TTGAGGCCCATCCTTGAGGG+AGG | + | 51789:10026-10045 | MS.gene072580:intron | 60.0% | |
| AACGAGCTGGGCCTCCCTCA+AGG | - | 51789:10040-10059 | None:intergenic | 65.0% | |
| ACGGGGACACGCCTTATCCG+AGG | - | 51789:9295-9314 | None:intergenic | 65.0% | |
| AGCTGGGCCTCCCTCAAGGA+TGG | - | 51789:10036-10055 | None:intergenic | 65.0% | |
| CTCAGGGACGGCCCTGAAAG+AGG | - | 51789:9461-9480 | None:intergenic | 65.0% | |
| GAGCTGTCTGCACCCCCTCA+GGG | + | 51789:10061-10080 | MS.gene072580:intron | 65.0% | |
| GCTGGGCCTCCCTCAAGGAT+GGG | - | 51789:10035-10054 | None:intergenic | 65.0% | |
| GGCAGACCCATTGTGCCGGA+TGG | + | 51789:7244-7263 | MS.gene072580:CDS | 65.0% | |
| GGCCGTCCCTGAGAATTCGG+AGG | + | 51789:9468-9487 | MS.gene072580:intron | 65.0% | |
| TGAGCTGTCTGCACCCCCTC+AGG | + | 51789:10060-10079 | MS.gene072580:intron | 65.0% | |
| TGTCTGCACCCCCTCAGGGA+CGG | + | 51789:10065-10084 | MS.gene072580:intron | 65.0% | |
| AGAGGGCAGGGCCGTCCCTG+AGG | - | 51789:10079-10098 | None:intergenic | 75.0% | |
| AGGGCAGGGCCGTCCCTGAG+GGG | - | 51789:10077-10096 | None:intergenic | 75.0% | |
| GAGGGCAGGGCCGTCCCTGA+GGG | - | 51789:10078-10097 | None:intergenic | 75.0% | |
| ! | GGGCAGGGCCGTCCCTGAGG+GGG | - | 51789:10076-10095 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 51789 | gene | 6526 | 10566 | 6526 | ID=MS.gene072580 |
| 51789 | mRNA | 6526 | 10566 | 6526 | ID=MS.gene072580.t1;Parent=MS.gene072580 |
| 51789 | exon | 6526 | 6606 | 6526 | ID=MS.gene072580.t1.exon1;Parent=MS.gene072580.t1 |
| 51789 | CDS | 6526 | 6606 | 6526 | ID=cds.MS.gene072580.t1;Parent=MS.gene072580.t1 |
| 51789 | exon | 7193 | 7294 | 7193 | ID=MS.gene072580.t1.exon2;Parent=MS.gene072580.t1 |
| 51789 | CDS | 7193 | 7294 | 7193 | ID=cds.MS.gene072580.t1;Parent=MS.gene072580.t1 |
| 51789 | exon | 10492 | 10566 | 10492 | ID=MS.gene072580.t1.exon3;Parent=MS.gene072580.t1 |
| 51789 | CDS | 10492 | 10566 | 10492 | ID=cds.MS.gene072580.t1;Parent=MS.gene072580.t1 |
| Gene Sequence |
| Protein sequence |
