AlfalfaGEDB | MS.gene072880

M. sativa cultivar XinJiangDaYe / MS.gene072880

KEGG: -
GO: GO:0003674 GO:0005488 GO:0005515 GO:0005543 GO:0005545 GO:0005575 GO:0008150 GO:0008289 GO:0009987 GO:0016043 GO:0022607 GO:0030135 GO:0030136 GO:0030276 GO:0031410 GO:0031982 GO:0034622 GO:0035091 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043933 GO:0048268 GO:0065003 GO:0071840 GO:0097708 GO:0110165
PFAM: PF07651.19

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene072880.t1	RHN70628.1	96.9	641	20	0	1	641	1	641	0.00E+00	1184.1

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene072880.t1	Q8S9J8	74.3	642	143	10	5	638	4	631	1.3e-242	840.5

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene072880.t1	A0A396J184	96.9	641	20	0	1	641	1	641	0.0e+00	1184.1

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene050479	MS.gene072880	0.835786	1.37E-56	-1.69E-46
MS.gene050547	MS.gene072880	0.824993	5.97E-54	-1.69E-46
MS.gene050811	MS.gene072880	0.825026	5.87E-54	-1.69E-46
MS.gene051973	MS.gene072880	0.8035	3.38E-49	-1.69E-46
MS.gene055370	MS.gene072880	-0.818214	2.20E-52	-1.69E-46
MS.gene055719	MS.gene072880	0.802646	5.08E-49	-1.69E-46
MS.gene056988	MS.gene072880	0.818909	1.53E-52	-1.69E-46
MS.gene05914	MS.gene072880	-0.806643	7.45E-50	-1.69E-46
MS.gene059512	MS.gene072880	-0.813711	2.23E-51	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene072880	MS.gene014846	PPI
MS.gene072880	MS.gene80244	PPI
MS.gene072880	MS.gene32646	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene072880.t1	MTR_3g106900	99.064	641	6	0	1	641	1	641	0.0	1313
MS.gene072880.t1	MTR_4g114960	57.231	650	220	11	1	641	1	601	0.0	746
MS.gene072880.t1	MTR_2g008170	45.963	644	275	11	1	618	1	597	3.44e-169	496
MS.gene072880.t1	MTR_8g008860	44.038	629	289	12	1	618	1	577	7.22e-166	487
MS.gene072880.t1	MTR_3g080490	43.503	354	151	5	4	357	3	307	2.86e-95	313
MS.gene072880.t1	MTR_2g037980	34.540	359	178	8	2	355	3	309	1.35e-59	210
MS.gene072880.t1	MTR_4g127440	30.169	590	316	13	2	577	3	510	5.40e-59	208
MS.gene072880.t1	MTR_4g115420	46.053	152	79	2	2	151	5	155	5.74e-38	148
MS.gene072880.t1	MTR_4g115420	28.493	365	199	9	227	577	172	488	7.56e-28	118
MS.gene072880.t1	MTR_8g106040	26.629	353	203	6	6	353	5	306	3.24e-33	133
MS.gene072880.t1	MTR_0530s0020	26.606	327	178	6	32	355	17	284	3.54e-30	125
MS.gene072880.t1	MTR_6g059380	34.437	151	95	1	4	150	7	157	6.14e-19	90.9
MS.gene072880.t1	MTR_1g033880	35.570	149	82	4	7	149	8	148	2.98e-17	84.7
MS.gene072880.t1	MTR_8g089850	30.220	182	117	5	1	178	1	176	8.03e-16	79.3
MS.gene072880.t1	MTR_3g086670	33.333	147	93	3	6	150	5	148	1.39e-15	79.0

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene072880.t1	AT2G25430	74.887	661	124	15	5	638	4	649	0.0	898
MS.gene072880.t1	AT4G32285	72.430	642	155	10	5	638	4	631	0.0	867
MS.gene072880.t1	AT4G32285	72.430	642	155	10	5	638	4	631	0.0	867
MS.gene072880.t1	AT1G03050	45.609	649	255	14	1	610	1	590	0.0	533
MS.gene072880.t1	AT4G02650	44.665	656	281	15	1	626	1	604	4.92e-164	483
MS.gene072880.t1	AT1G05020	40.199	403	180	6	4	400	3	350	5.81e-96	308
MS.gene072880.t1	AT4G25940	31.954	604	300	18	2	572	3	528	2.20e-72	245
MS.gene072880.t1	AT1G14910	33.645	535	262	18	2	514	3	466	1.43e-70	242
MS.gene072880.t1	AT1G14910	33.271	535	259	19	2	514	3	461	7.72e-67	232
MS.gene072880.t1	AT2G01600	30.146	617	309	19	2	594	3	521	7.01e-65	224
MS.gene072880.t1	AT5G57200	34.722	360	175	8	2	355	3	308	8.77e-62	216
MS.gene072880.t1	AT5G35200	43.333	150	82	2	6	153	11	159	1.80e-34	138
MS.gene072880.t1	AT5G35200	28.212	358	202	11	227	575	174	485	7.39e-24	106
MS.gene072880.t1	AT5G35200	43.333	150	82	2	6	153	11	159	1.80e-34	138
MS.gene072880.t1	AT5G35200	28.212	358	202	11	227	575	174	485	7.39e-24	106
MS.gene072880.t1	AT1G68110	26.836	354	186	11	7	353	5	292	1.88e-18	88.2
MS.gene072880.t1	AT1G33340	35.099	151	92	2	3	150	6	153	1.16e-17	85.9
MS.gene072880.t1	AT4G40080	34.014	147	91	4	10	150	11	157	1.08e-15	79.7
MS.gene072880.t1	AT1G25240	35.811	148	81	5	7	148	5	144	1.86e-15	79.0
MS.gene072880.t1	AT1G25240	35.811	148	81	5	7	148	6	145	1.93e-15	79.0

Find 213 sgRNAs with CRISPR-Local

Find 234 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCTTTCCTCTCTGGACTCTT+TGG	0.225582	3.2:+87339041	None:intergenic
TGCTAGCAGTGTGGCGTTGC+CGG	0.225948	3.2:-87338541	MS.gene072880:CDS
CTAGTAATTCTTTGAACTTC+CGG	0.266921	3.2:+87339113	None:intergenic
TCAGGCTCTGGTGGAGGTGG+CGG	0.270903	3.2:+87338930	None:intergenic
TTCTTGGCTTGTAGGCCAAC+TGG	0.276217	3.2:-87339377	MS.gene072880:CDS
GGAGGTCCCATTCCATGAAC+TGG	0.286179	3.2:+87338243	None:intergenic
GAGTCATTTGCAGAGGCTTT+TGG	0.294432	3.2:-87339405	MS.gene072880:CDS
TGGATCGTTTCTTGGCTTGT+AGG	0.296888	3.2:-87339385	MS.gene072880:CDS
TGCACAGATCCATCTGGGGC+TGG	0.298625	3.2:+87338483	None:intergenic
ATACATGCCATTCAACAATA+AGG	0.303811	3.2:+87338617	None:intergenic
ATGAGGCTCATTCAAGTTCT+TGG	0.306921	3.2:-87339742	MS.gene072880:CDS
CAGGCTCTGGTGGAGGTGGC+GGG	0.310633	3.2:+87338931	None:intergenic
GTGGTGGAGGTGGGGATGAG+AGG	0.323272	3.2:-87339625	MS.gene072880:CDS
TCCTCCGTAAACTGCGGTTT+TGG	0.326695	3.2:+87338900	None:intergenic
AAGAATTACTAGTAAGTTGT+TGG	0.329377	3.2:-87339102	MS.gene072880:CDS
CAAACCCCTGCAGCTGAACC+TGG	0.330516	3.2:-87338723	MS.gene072880:CDS
TTTGCGTTGGCACTCTTTGC+TGG	0.331820	3.2:-87338825	MS.gene072880:CDS
TCTAGGCAGAAGAATGCTTT+AGG	0.335417	3.2:-87338654	MS.gene072880:CDS
ACAGGTGTTGTGGTCTTTCC+CGG	0.343337	3.2:+87338516	None:intergenic
GGTAGTGTTGGTGGTGGTGG+TGG	0.343928	3.2:-87339641	MS.gene072880:CDS
TGCCAAGCTGAAGTTACTTC+CGG	0.346193	3.2:+87338744	None:intergenic
GTGGGAGAGAAAATAATTTC+AGG	0.350857	3.2:-87339598	MS.gene072880:CDS
ACAAGAGGAGGAGCCGGTTC+AGG	0.352668	3.2:-87338997	MS.gene072880:CDS
TGCTGATATATGCGAGGTTT+TGG	0.359618	3.2:-87339285	MS.gene072880:CDS
TCAGGCTCAGGCTCTGGTGG+AGG	0.361839	3.2:+87338924	None:intergenic
TTGTTGCTTCTTCTCCATTT+CGG	0.363887	3.2:+87338395	None:intergenic
CAGTGTGGCGTTGCCGGGAC+CGG	0.367032	3.2:-87338535	MS.gene072880:CDS
GGAGCTTCCTCTTTCCTCTC+TGG	0.367047	3.2:+87339032	None:intergenic
GGCGAGATCCTCCGAGTATC+CGG	0.368486	3.2:-87339132	MS.gene072880:CDS
GCTGGTAGTGTTGGTGGTGG+TGG	0.373659	3.2:-87339644	MS.gene072880:CDS
TGCAGTCACTGCAGACGATC+AGG	0.373792	3.2:-87338856	MS.gene072880:CDS
TGTCGGGGAATGATGATAGA+AGG	0.374281	3.2:-87339484	MS.gene072880:CDS
GGCTCAGGCTCTGGTGGAGG+TGG	0.378487	3.2:+87338927	None:intergenic
GAGCAACATGGCGCCGGAAT+TGG	0.378632	3.2:-87340044	MS.gene072880:CDS
ATAATCTCTTCCTGGAAAAT+CGG	0.381274	3.2:+87339815	None:intergenic
ATCTGTGCAGCCAGTTAATC+AGG	0.381955	3.2:-87338469	MS.gene072880:CDS
TGCATTGTATCCGTTGGTTA+AGG	0.382273	3.2:-87339324	MS.gene072880:CDS
TCAAAGGCCTTCACACAATC+AGG	0.395986	3.2:+87339227	None:intergenic
TTTGGCTCAGGCTCAGGCTC+TGG	0.396279	3.2:+87338918	None:intergenic
GCTTTCCCAGGTTCAGCTGC+AGG	0.404670	3.2:+87338717	None:intergenic
TCAGCTGTGTCCAAGCGATT+GGG	0.406593	3.2:-87339908	MS.gene072880:CDS
CTTCTGCCTAGATAAATTGC+TGG	0.406648	3.2:+87338665	None:intergenic
CTGGGTTGGCTAAGAACAAT+AGG	0.407625	3.2:-87339358	MS.gene072880:CDS
TAGCATACATAATCTCTTCC+TGG	0.407692	3.2:+87339807	None:intergenic
ACTTCCGGCTGTCCATTTGA+TGG	0.408563	3.2:+87338759	None:intergenic
TATGGAGGTGGACAATTTAG+AGG	0.412015	3.2:-87339554	MS.gene072880:CDS
CTTTCCCAGGTTCAGCTGCA+GGG	0.412658	3.2:+87338718	None:intergenic
CTTGATCCCTTATTGTTGAA+TGG	0.413257	3.2:-87338624	MS.gene072880:CDS
GTTGTGGTCTTTCCCGGTCC+CGG	0.413441	3.2:+87338522	None:intergenic
GCGAACGGATCCTGATTAAC+TGG	0.416129	3.2:+87338459	None:intergenic
CTATGTGCAAATGGCCGAAA+TGG	0.416745	3.2:-87338409	MS.gene072880:CDS
CCGGCTAATAATAATGCAAA+TGG	0.417868	3.2:-87338798	MS.gene072880:CDS
TGGGAAGCCTTTCCATCAAA+TGG	0.420108	3.2:-87338771	MS.gene072880:CDS
GATTGGGGAAGACGCGTGAT+TGG	0.420367	3.2:-87339892	MS.gene072880:CDS
TTCAGCTGTGTCCAAGCGAT+TGG	0.424563	3.2:-87339909	MS.gene072880:CDS
ACAATCGCCACCTCCAATTC+CGG	0.424606	3.2:+87340031	None:intergenic
GCACAGATCCATCTGGGGCT+GGG	0.426777	3.2:+87338484	None:intergenic
TCCTCTTGTACTTCCAGCTT+AGG	0.430283	3.2:+87339011	None:intergenic
TGAGCCAAAACCGCAGTTTA+CGG	0.430872	3.2:-87338904	MS.gene072880:CDS
CCACCGAATGAGTATGAGTA+TGG	0.432260	3.2:-87339572	MS.gene072880:CDS
TGAACCTGGGAAAGCGGATT+GGG	0.433469	3.2:-87338709	MS.gene072880:CDS
ATCTCGTTCATATCCTGAAC+CGG	0.433714	3.2:+87338984	None:intergenic
ACTGGCTGCACAGATCCATC+TGG	0.435637	3.2:+87338477	None:intergenic
TTGTTACTGTGACTCCTTTG+AGG	0.437358	3.2:-87339460	MS.gene072880:CDS
AACAAAATGAACAATGGTAC+TGG	0.437938	3.2:-87338303	MS.gene072880:CDS
GCTAGCAGTGTGGCGTTGCC+GGG	0.438220	3.2:-87338540	MS.gene072880:CDS
CGGCTGTCCATTTGATGGAA+AGG	0.439223	3.2:+87338764	None:intergenic
TGAGGCTCATTCAAGTTCTT+GGG	0.442141	3.2:-87339741	MS.gene072880:CDS
AGCGGATTGGGAACTGGCAT+TGG	0.444215	3.2:-87338697	MS.gene072880:CDS
TACAATTGGTGTAAAGAAAG+TGG	0.445885	3.2:-87339158	MS.gene072880:CDS
GGCTCAGGCTCAGGCTCTGG+TGG	0.448716	3.2:+87338921	None:intergenic
ACCTCCCTCCTATGTGCAAA+TGG	0.449011	3.2:-87338418	MS.gene072880:CDS
TGGAGGAGTTTGTGAGGGAT+AGG	0.450640	3.2:-87339073	MS.gene072880:CDS
GGCACTCTTTGCTGGTGCAC+CGG	0.450777	3.2:-87338817	MS.gene072880:CDS
TACATGCCATTCAACAATAA+GGG	0.450802	3.2:+87338618	None:intergenic
AATGGTACTGGATACTATGC+TGG	0.457007	3.2:-87338291	MS.gene072880:CDS
TGGGAAAGCGGATTGGGAAC+TGG	0.460427	3.2:-87338703	MS.gene072880:CDS
AGACAGCCAGCAATTTATCT+AGG	0.466153	3.2:-87338671	MS.gene072880:CDS
GTGAGCACTTCCCAACTTAG+TGG	0.466638	3.2:-87338570	MS.gene072880:CDS
GGCTTGTAGGCCAACTGGGT+TGG	0.467428	3.2:-87339372	MS.gene072880:CDS
AGCACTCCCTCCACTAAGTT+GGG	0.468854	3.2:+87338560	None:intergenic
CTGAACCTGGGAAAGCGGAT+TGG	0.473866	3.2:-87338710	MS.gene072880:CDS
TCTTGGCTTGTAGGCCAACT+GGG	0.474549	3.2:-87339376	MS.gene072880:CDS
GACGAGTCACGACGAAGATC+CGG	0.474753	3.2:-87340002	MS.gene072880:CDS
TTAGAGGGGAAGGTGGGATG+AGG	0.476333	3.2:-87339538	MS.gene072880:CDS
GTGGGGATGAGAGGTTCAGT+GGG	0.476909	3.2:-87339616	MS.gene072880:CDS
TAGCACTCCCTCCACTAAGT+TGG	0.477701	3.2:+87338559	None:intergenic
CCATTTGCATTATTATTAGC+CGG	0.478356	3.2:+87338798	None:intergenic
CAGAAGAATGCTTTAGGTGG+TGG	0.478692	3.2:-87338648	MS.gene072880:CDS
TGTTACTGTGACTCCTTTGA+GGG	0.482095	3.2:-87339459	MS.gene072880:CDS
GACAATTTAGAGGGGAAGGT+GGG	0.482887	3.2:-87339544	MS.gene072880:CDS
GAGGTCCCATTCCATGAACT+GGG	0.483754	3.2:+87338244	None:intergenic
CATTTCGGCCATTTGCACAT+AGG	0.483880	3.2:+87338410	None:intergenic
ACCGCAGTTTACGGAGGACT+TGG	0.485521	3.2:-87338895	MS.gene072880:CDS
TAGTAAGTTGTTGGAGACAC+TGG	0.489566	3.2:-87339093	MS.gene072880:CDS
GGAGTATGGTAATACCCGTT+TGG	0.490570	3.2:+87338222	None:intergenic
AAAAGCGATTGGAGCGGTGA+AGG	0.491311	3.2:-87340098	MS.gene072880:CDS
GTGAAGGATCAGACGAGTAT+TGG	0.495455	3.2:-87340082	MS.gene072880:CDS
AGTTCCCAATCCGCTTTCCC+AGG	0.496887	3.2:+87338705	None:intergenic
CAACATGGCGCCGGAATTGG+AGG	0.497407	3.2:-87340041	MS.gene072880:CDS
GGTGATGTGAATGAAGTGTC+GGG	0.503105	3.2:-87339500	MS.gene072880:CDS
GAAAGAGGAAGCTCCTAAGC+TGG	0.504819	3.2:-87339024	MS.gene072880:CDS
GGACAATTTAGAGGGGAAGG+TGG	0.509390	3.2:-87339545	MS.gene072880:CDS
ACGCGTCTTCCCCAATCGCT+TGG	0.510059	3.2:+87339898	None:intergenic
TCTTTGAACTTCCGGATACT+CGG	0.511861	3.2:+87339121	None:intergenic
CCTCCATACTCATACTCATT+CGG	0.512264	3.2:+87339569	None:intergenic
CTGGCTGCACAGATCCATCT+GGG	0.512279	3.2:+87338478	None:intergenic
AGCACAATCCGAAAAGCGAT+TGG	0.514162	3.2:-87340109	MS.gene072880:CDS
GGGGTATAATTCTCAGGTGC+AGG	0.514218	3.2:+87338951	None:intergenic
ATGGAATGGGACCTCCAAAC+GGG	0.516808	3.2:-87338236	MS.gene072880:CDS
TTAGCTCTCCCAGCCCCAGA+TGG	0.517956	3.2:-87338492	MS.gene072880:CDS
TTCGGCCATTTGCACATAGG+AGG	0.519643	3.2:+87338413	None:intergenic
AGTGTGGCGTTGCCGGGACC+GGG	0.520277	3.2:-87338534	MS.gene072880:CDS
ATGTTGTTTGATAGAAAAGC+TGG	0.520386	3.2:-87339662	MS.gene072880:CDS
TTGGTGTAAAGAAAGTGGTT+TGG	0.520726	3.2:-87339153	MS.gene072880:CDS
ATGTTCAATGATGCGGCGAA+CGG	0.523167	3.2:+87338444	None:intergenic
GGTGGCGGGGTATAATTCTC+AGG	0.525615	3.2:+87338945	None:intergenic
ATGCTACGAGGAGAGGGACT+AGG	0.526966	3.2:-87339790	MS.gene072880:CDS
ATCTTCCCGAAAATCCTCTC+CGG	0.528840	3.2:+87339428	None:intergenic
TCCTTTGAGGGATATGAAGC+CGG	0.529821	3.2:-87339447	MS.gene072880:CDS
GGAAGTACAAGAGGAGGAGC+CGG	0.530728	3.2:-87339003	MS.gene072880:CDS
AAACCCCTGCAGCTGAACCT+GGG	0.532015	3.2:-87338722	MS.gene072880:CDS
TCAGGATATGAACGAGATCA+AGG	0.532360	3.2:-87338979	MS.gene072880:CDS
GGAGGAGTTTGTGAGGGATA+GGG	0.532775	3.2:-87339072	MS.gene072880:CDS
AGCTGTGGCATCAGTATGCA+AGG	0.533057	3.2:-87338353	MS.gene072880:CDS
CGGAGGACTTGGTGAATCTG+AGG	0.533271	3.2:-87338884	MS.gene072880:CDS
CTTATATACTTCTCACTCGC+CGG	0.534004	3.2:+87339983	None:intergenic
AGAAGAATGCTTTAGGTGGT+GGG	0.534327	3.2:-87338647	MS.gene072880:CDS
TGCAGCTGAACCTGGGAAAG+CGG	0.538233	3.2:-87338715	MS.gene072880:CDS
AGGCTCTGGTGGAGGTGGCG+GGG	0.540099	3.2:+87338932	None:intergenic
AAAGAGTCCAGAGAGGAAAG+AGG	0.540156	3.2:-87339039	MS.gene072880:CDS
GATAGAAAAGCTGGTAGTGT+TGG	0.540496	3.2:-87339653	MS.gene072880:CDS
CATGGCGCCGGAATTGGAGG+TGG	0.543914	3.2:-87340038	MS.gene072880:CDS
GGGGCTGGGAGAGCTAAAAC+AGG	0.544685	3.2:+87338498	None:intergenic
TTTCCCAGGTTCAGCTGCAG+GGG	0.545857	3.2:+87338719	None:intergenic
GGTGGACAATTTAGAGGGGA+AGG	0.546935	3.2:-87339548	MS.gene072880:CDS
ATGGTACTGGATACTATGCT+GGG	0.551613	3.2:-87338290	MS.gene072880:CDS
ATGGAGGTGGACAATTTAGA+GGG	0.551974	3.2:-87339553	MS.gene072880:CDS
ATGAGGAAGACGAGGTCGTA+TGG	0.552855	3.2:-87339521	MS.gene072880:CDS
GTTCATCGACTGATGAATGA+TGG	0.553308	3.2:-87339842	MS.gene072880:CDS
TGGCATCAGTATGCAAGGGA+TGG	0.556853	3.2:-87338348	MS.gene072880:CDS
CTTTCCATCAAATGGACAGC+CGG	0.557840	3.2:-87338763	MS.gene072880:CDS
TCAGGGTAATAGATTTGCGT+TGG	0.558037	3.2:-87338838	MS.gene072880:CDS
TTGTGAGGGATAGGGCTAAG+AGG	0.559656	3.2:-87339064	MS.gene072880:CDS
TCCTAAGCTGGAAGTACAAG+AGG	0.562685	3.2:-87339012	MS.gene072880:CDS
CAGCTGTGTCCAAGCGATTG+GGG	0.563623	3.2:-87339907	MS.gene072880:CDS
GGTGGGGATGAGAGGTTCAG+TGG	0.563806	3.2:-87339617	MS.gene072880:CDS
CATGGAATGGGACCTCCAAA+CGG	0.565171	3.2:-87338237	MS.gene072880:CDS
TAATAATGCAAATGGATCGT+GGG	0.567598	3.2:-87338790	MS.gene072880:CDS
AGAAAAGCTGGTAGTGTTGG+TGG	0.569447	3.2:-87339650	MS.gene072880:CDS
AATGAGTATGAGTATGGAGG+TGG	0.576242	3.2:-87339566	MS.gene072880:CDS
AGCACTTGCATAAGCATCAA+AGG	0.577337	3.2:+87339211	None:intergenic
TCGGCCATTTGCACATAGGA+GGG	0.577744	3.2:+87338414	None:intergenic
AGTAGCGAGCAACATGGCGC+CGG	0.578249	3.2:-87340050	MS.gene072880:CDS
ATTTGCACATAGGAGGGAGG+TGG	0.579870	3.2:+87338420	None:intergenic
TTTGATTGCATTGTATCCGT+TGG	0.580416	3.2:-87339330	MS.gene072880:CDS
AGCCGGAAGTAACTTCAGCT+TGG	0.581334	3.2:-87338746	MS.gene072880:CDS
GTATGGTAATACCCGTTTGG+AGG	0.584432	3.2:+87338225	None:intergenic
TTATGTATGCTACGAGGAGA+GGG	0.585734	3.2:-87339796	MS.gene072880:CDS
TATGCAAGGGATGGGATGCA+AGG	0.585796	3.2:-87338339	MS.gene072880:CDS
ATAATAATGCAAATGGATCG+TGG	0.587702	3.2:-87338791	MS.gene072880:CDS
ATTATGTATGCTACGAGGAG+AGG	0.593045	3.2:-87339797	MS.gene072880:CDS
TTGTTCTTAGCCAACCCAGT+TGG	0.593548	3.2:+87339362	None:intergenic
TTGAATGGCATGTATGATCA+AGG	0.598862	3.2:-87338609	MS.gene072880:CDS
GGAAGATGAGTCATTTGCAG+AGG	0.598868	3.2:-87339412	MS.gene072880:CDS
GCTTGACAAATTCTTTGACA+TGG	0.599304	3.2:-87339255	MS.gene072880:CDS
ATGCTTTGTATCTCGATCAG+AGG	0.601861	3.2:-87339694	MS.gene072880:CDS
TCCGGCTTCATATCCCTCAA+AGG	0.602526	3.2:+87339446	None:intergenic
AACTTGATGTCTTACTCGCG+TGG	0.604269	3.2:-87339950	MS.gene072880:CDS
TGGTGATGTGAATGAAGTGT+CGG	0.612307	3.2:-87339501	MS.gene072880:CDS
GACACTGGAGGAGTTTGTGA+GGG	0.619044	3.2:-87339078	MS.gene072880:CDS
GCAGTCACTGCAGACGATCA+GGG	0.621548	3.2:-87338855	MS.gene072880:CDS
TAAGCTGGAAGTACAAGAGG+AGG	0.625162	3.2:-87339009	MS.gene072880:CDS
AAAGCTGGTAGTGTTGGTGG+TGG	0.625469	3.2:-87339647	MS.gene072880:CDS
TGGAGGTGGACAATTTAGAG+GGG	0.626675	3.2:-87339552	MS.gene072880:CDS
TTGTGCATGAGCAGCAGCTG+TGG	0.626683	3.2:-87338368	MS.gene072880:CDS
AGACACTGGAGGAGTTTGTG+AGG	0.628043	3.2:-87339079	MS.gene072880:CDS
GGTCCCATTCCATGAACTGG+GGG	0.628379	3.2:+87338246	None:intergenic
AGGTGGAATGTTCAATGATG+CGG	0.628537	3.2:+87338437	None:intergenic
AGCACTTCCCAACTTAGTGG+AGG	0.634431	3.2:-87338567	MS.gene072880:CDS
GCCATTTGCACATAGGAGGG+AGG	0.634464	3.2:+87338417	None:intergenic
TGGTACTGGATACTATGCTG+GGG	0.635659	3.2:-87338289	MS.gene072880:CDS
GGCATCAGTATGCAAGGGAT+GGG	0.637136	3.2:-87338347	MS.gene072880:CDS
ACCAAGTCCTCCGTAAACTG+CGG	0.641216	3.2:+87338894	None:intergenic
GGAGGACTTGGTGAATCTGA+GGG	0.641575	3.2:-87338883	MS.gene072880:CDS
TAAACAGATTGATGAACTTG+TGG	0.645164	3.2:-87339186	MS.gene072880:CDS
AGCTTGAACAAAATGAACAA+TGG	0.645990	3.2:-87338309	MS.gene072880:CDS
CCATACTCATACTCATTCGG+TGG	0.649853	3.2:+87339572	None:intergenic
TGAAAACTCTCCTTAACCAA+CGG	0.650974	3.2:+87339314	None:intergenic
GAGAGCTAAAACAGGTGTTG+TGG	0.651335	3.2:+87338506	None:intergenic
GCTGTATGCTGATATATGCG+AGG	0.654854	3.2:-87339291	MS.gene072880:CDS
AGCGAAAGTAGCGAGCAACA+TGG	0.657386	3.2:-87340056	MS.gene072880:CDS
TGAGGGATATGAAGCCGGAG+AGG	0.659064	3.2:-87339442	MS.gene072880:CDS
CCGAATGAGTATGAGTATGG+AGG	0.662053	3.2:-87339569	MS.gene072880:CDS
GCACTTCCCAACTTAGTGGA+GGG	0.664190	3.2:-87338566	MS.gene072880:CDS
TAAGTTGTTGGAGACACTGG+AGG	0.669834	3.2:-87339090	MS.gene072880:CDS
GCTGTGGCATCAGTATGCAA+GGG	0.669933	3.2:-87338352	MS.gene072880:CDS
AGGCAGAAGAATGCTTTAGG+TGG	0.677279	3.2:-87338651	MS.gene072880:CDS
TGGCATGTATGATCAAGGAA+TGG	0.678938	3.2:-87338604	MS.gene072880:CDS
TTGAACTTCCGGATACTCGG+AGG	0.680206	3.2:+87339124	None:intergenic
GGACTTGGTGAATCTGAGGG+AGG	0.680416	3.2:-87338880	MS.gene072880:CDS
TGGAGGGAGTGCTAGCAGTG+TGG	0.687452	3.2:-87338550	MS.gene072880:CDS
AGGTCCCATTCCATGAACTG+GGG	0.690448	3.2:+87338245	None:intergenic
GGTACTGGATACTATGCTGG+GGG	0.690788	3.2:-87338288	MS.gene072880:CDS
GGAGTATCCTGATTGTGTGA+AGG	0.692728	3.2:-87339234	MS.gene072880:CDS
GCCAAAACCGCAGTTTACGG+AGG	0.695554	3.2:-87338901	MS.gene072880:CDS
GTGATGTGAATGAAGTGTCG+GGG	0.703090	3.2:-87339499	MS.gene072880:CDS
TGGCTGCACAGATCCATCTG+GGG	0.707777	3.2:+87338479	None:intergenic
AATCCGAAAAGCGATTGGAG+CGG	0.709364	3.2:-87340104	MS.gene072880:CDS
AAGGTGGGATGAGGAAGACG+AGG	0.712639	3.2:-87339529	MS.gene072880:CDS
AGAGGCCAAAGAGTCCAGAG+AGG	0.718357	3.2:-87339046	MS.gene072880:CDS
TGTATGATCAAGGAATGGTG+AGG	0.740576	3.2:-87338599	MS.gene072880:CDS
AAGAGATTATGTATGCTACG+AGG	0.775372	3.2:-87339802	MS.gene072880:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	AAGAATTACTAGTAAGTTGT+TGG	-	chr3.2:87339231-87339250	MS.gene072880:CDS	25.0%
	AACAAAATGAACAATGGTAC+TGG	-	chr3.2:87340030-87340049	MS.gene072880:CDS	30.0%
	AGCTTGAACAAAATGAACAA+TGG	-	chr3.2:87340024-87340043	MS.gene072880:CDS	30.0%
	ATAATAATGCAAATGGATCG+TGG	-	chr3.2:87339542-87339561	MS.gene072880:CDS	30.0%
	ATAATCTCTTCCTGGAAAAT+CGG	+	chr3.2:87338521-87338540	None:intergenic	30.0%
	ATACATGCCATTCAACAATA+AGG	+	chr3.2:87339719-87339738	None:intergenic	30.0%
	CCATTTGCATTATTATTAGC+CGG	+	chr3.2:87339538-87339557	None:intergenic	30.0%
	CTAGTAATTCTTTGAACTTC+CGG	+	chr3.2:87339223-87339242	None:intergenic	30.0%
	TAAACAGATTGATGAACTTG+TGG	-	chr3.2:87339147-87339166	MS.gene072880:CDS	30.0%
	TAATAATGCAAATGGATCGT+GGG	-	chr3.2:87339543-87339562	MS.gene072880:CDS	30.0%
	TACAATTGGTGTAAAGAAAG+TGG	-	chr3.2:87339175-87339194	MS.gene072880:CDS	30.0%
	TACATGCCATTCAACAATAA+GGG	+	chr3.2:87339718-87339737	None:intergenic	30.0%
!	ATGTTGTTTGATAGAAAAGC+TGG	-	chr3.2:87338671-87338690	MS.gene072880:CDS	30.0%
!!	TATGTCTGATTTTAGAGATG+AGG	-	chr3.2:87338574-87338593	MS.gene072880:CDS	30.0%
	AAGAGATTATGTATGCTACG+AGG	-	chr3.2:87338531-87338550	MS.gene072880:CDS	35.0%
	CCGGCTAATAATAATGCAAA+TGG	-	chr3.2:87339535-87339554	MS.gene072880:CDS	35.0%
	CTTGATCCCTTATTGTTGAA+TGG	-	chr3.2:87339709-87339728	MS.gene072880:CDS	35.0%
	GCTTGACAAATTCTTTGACA+TGG	-	chr3.2:87339078-87339097	MS.gene072880:CDS	35.0%
	GTGGGAGAGAAAATAATTTC+AGG	-	chr3.2:87338735-87338754	MS.gene072880:CDS	35.0%
	TAGCATACATAATCTCTTCC+TGG	+	chr3.2:87338529-87338548	None:intergenic	35.0%
	TGAAAACTCTCCTTAACCAA+CGG	+	chr3.2:87339022-87339041	None:intergenic	35.0%
	TTGAATGGCATGTATGATCA+AGG	-	chr3.2:87339724-87339743	MS.gene072880:CDS	35.0%
	TTGGTGTAAAGAAAGTGGTT+TGG	-	chr3.2:87339180-87339199	MS.gene072880:CDS	35.0%
	TTTGATTGCATTGTATCCGT+TGG	-	chr3.2:87339003-87339022	MS.gene072880:CDS	35.0%
!	AACTTGTGGCGTTTTACAAT+TGG	-	chr3.2:87339161-87339180	MS.gene072880:CDS	35.0%
!	TCATTTTGTTCAAGCTAGAC+TGG	+	chr3.2:87340020-87340039	None:intergenic	35.0%
!	TTGTTGCTTCTTCTCCATTT+CGG	+	chr3.2:87339941-87339960	None:intergenic	35.0%
	AATGAGTATGAGTATGGAGG+TGG	-	chr3.2:87338767-87338786	MS.gene072880:CDS	40.0%
	AGACAGCCAGCAATTTATCT+AGG	-	chr3.2:87339662-87339681	MS.gene072880:CDS	40.0%
	AGCACTTGCATAAGCATCAA+AGG	+	chr3.2:87339125-87339144	None:intergenic	40.0%
	AGGTGGAATGTTCAATGATG+CGG	+	chr3.2:87339899-87339918	None:intergenic	40.0%
	ATCTCGTTCATATCCTGAAC+CGG	+	chr3.2:87339352-87339371	None:intergenic	40.0%
	ATGCTTTGTATCTCGATCAG+AGG	-	chr3.2:87338639-87338658	MS.gene072880:CDS	40.0%
	ATGGAGGTGGACAATTTAGA+GGG	-	chr3.2:87338780-87338799	MS.gene072880:CDS	40.0%
	ATTATGTATGCTACGAGGAG+AGG	-	chr3.2:87338536-87338555	MS.gene072880:CDS	40.0%
	CCTCCATACTCATACTCATT+CGG	+	chr3.2:87338767-87338786	None:intergenic	40.0%
	CTTATATACTTCTCACTCGC+CGG	+	chr3.2:87338353-87338372	None:intergenic	40.0%
	CTTCTGCCTAGATAAATTGC+TGG	+	chr3.2:87339671-87339690	None:intergenic	40.0%
	TAGTAAGTTGTTGGAGACAC+TGG	-	chr3.2:87339240-87339259	MS.gene072880:CDS	40.0%
	TATGGAGGTGGACAATTTAG+AGG	-	chr3.2:87338779-87338798	MS.gene072880:CDS	40.0%
	TCAGGATATGAACGAGATCA+AGG	-	chr3.2:87339354-87339373	MS.gene072880:CDS	40.0%
	TCAGGGTAATAGATTTGCGT+TGG	-	chr3.2:87339495-87339514	MS.gene072880:CDS	40.0%
	TCTAGGCAGAAGAATGCTTT+AGG	-	chr3.2:87339679-87339698	MS.gene072880:CDS	40.0%
	TCTTTGAACTTCCGGATACT+CGG	+	chr3.2:87339215-87339234	None:intergenic	40.0%
	TGGCATGTATGATCAAGGAA+TGG	-	chr3.2:87339729-87339748	MS.gene072880:CDS	40.0%
	TGTATGATCAAGGAATGGTG+AGG	-	chr3.2:87339734-87339753	MS.gene072880:CDS	40.0%
	TGTTACTGTGACTCCTTTGA+GGG	-	chr3.2:87338874-87338893	MS.gene072880:CDS	40.0%
	TTATGTATGCTACGAGGAGA+GGG	-	chr3.2:87338537-87338556	MS.gene072880:CDS	40.0%
	TTGTTACTGTGACTCCTTTG+AGG	-	chr3.2:87338873-87338892	MS.gene072880:CDS	40.0%
!	AATGGTACTGGATACTATGC+TGG	-	chr3.2:87340042-87340061	MS.gene072880:CDS	40.0%
!	AGAAGAATGCTTTAGGTGGT+GGG	-	chr3.2:87339686-87339705	MS.gene072880:CDS	40.0%
!	ATGAGGCTCATTCAAGTTCT+TGG	-	chr3.2:87338591-87338610	MS.gene072880:CDS	40.0%
!	ATGGTACTGGATACTATGCT+GGG	-	chr3.2:87340043-87340062	MS.gene072880:CDS	40.0%
!	GATAGAAAAGCTGGTAGTGT+TGG	-	chr3.2:87338680-87338699	MS.gene072880:CDS	40.0%
!	GTTCATCGACTGATGAATGA+TGG	-	chr3.2:87338491-87338510	MS.gene072880:CDS	40.0%
!	TGAGGCTCATTCAAGTTCTT+GGG	-	chr3.2:87338592-87338611	MS.gene072880:CDS	40.0%
!	TGCATTGTATCCGTTGGTTA+AGG	-	chr3.2:87339009-87339028	MS.gene072880:CDS	40.0%
!	TGCTGATATATGCGAGGTTT+TGG	-	chr3.2:87339048-87339067	MS.gene072880:CDS	40.0%
!	TGGTGATGTGAATGAAGTGT+CGG	-	chr3.2:87338832-87338851	MS.gene072880:CDS	40.0%
!!	GGGATCATTCTGCTTTTGTT+AGG	-	chr3.2:87338612-87338631	MS.gene072880:CDS	40.0%
	AAAGAGTCCAGAGAGGAAAG+AGG	-	chr3.2:87339294-87339313	MS.gene072880:CDS	45.0%
	AACTTGATGTCTTACTCGCG+TGG	-	chr3.2:87338383-87338402	MS.gene072880:CDS	45.0%
	AATCCGAAAAGCGATTGGAG+CGG	-	chr3.2:87338229-87338248	MS.gene072880:CDS	45.0%
	AGCACAATCCGAAAAGCGAT+TGG	-	chr3.2:87338224-87338243	MS.gene072880:CDS	45.0%
	ATCTGTGCAGCCAGTTAATC+AGG	-	chr3.2:87339864-87339883	MS.gene072880:CDS	45.0%
	ATCTTCCCGAAAATCCTCTC+CGG	+	chr3.2:87338908-87338927	None:intergenic	45.0%
	ATGTTCAATGATGCGGCGAA+CGG	+	chr3.2:87339892-87339911	None:intergenic	45.0%
	CATTTCGGCCATTTGCACAT+AGG	+	chr3.2:87339926-87339945	None:intergenic	45.0%
	CCACCGAATGAGTATGAGTA+TGG	-	chr3.2:87338761-87338780	MS.gene072880:CDS	45.0%
	CCATACTCATACTCATTCGG+TGG	+	chr3.2:87338764-87338783	None:intergenic	45.0%
	CCGAATGAGTATGAGTATGG+AGG	-	chr3.2:87338764-87338783	MS.gene072880:CDS	45.0%
	CTATGTGCAAATGGCCGAAA+TGG	-	chr3.2:87339924-87339943	MS.gene072880:CDS	45.0%
	CTTTCCATCAAATGGACAGC+CGG	-	chr3.2:87339570-87339589	MS.gene072880:CDS	45.0%
	GACAATTTAGAGGGGAAGGT+GGG	-	chr3.2:87338789-87338808	MS.gene072880:CDS	45.0%
	GCTGTATGCTGATATATGCG+AGG	-	chr3.2:87339042-87339061	MS.gene072880:CDS	45.0%
	GGAAGATGAGTCATTTGCAG+AGG	-	chr3.2:87338921-87338940	MS.gene072880:CDS	45.0%
	GGAGTATGGTAATACCCGTT+TGG	+	chr3.2:87340114-87340133	None:intergenic	45.0%
	GTATGGTAATACCCGTTTGG+AGG	+	chr3.2:87340111-87340130	None:intergenic	45.0%
	GTGAAGGATCAGACGAGTAT+TGG	-	chr3.2:87338251-87338270	MS.gene072880:CDS	45.0%
	TAAGTTGTTGGAGACACTGG+AGG	-	chr3.2:87339243-87339262	MS.gene072880:CDS	45.0%
	TCAAAGGCCTTCACACAATC+AGG	+	chr3.2:87339109-87339128	None:intergenic	45.0%
	TCCTCTTGTACTTCCAGCTT+AGG	+	chr3.2:87339325-87339344	None:intergenic	45.0%
	TCTTTCCTCTCTGGACTCTT+TGG	+	chr3.2:87339295-87339314	None:intergenic	45.0%
	TGAGCCAAAACCGCAGTTTA+CGG	-	chr3.2:87339429-87339448	MS.gene072880:CDS	45.0%
	TGCCAAGCTGAAGTTACTTC+CGG	+	chr3.2:87339592-87339611	None:intergenic	45.0%
	TGGAGGTGGACAATTTAGAG+GGG	-	chr3.2:87338781-87338800	MS.gene072880:CDS	45.0%
	TGGGAAGCCTTTCCATCAAA+TGG	-	chr3.2:87339562-87339581	MS.gene072880:CDS	45.0%
	TGTCGGGGAATGATGATAGA+AGG	-	chr3.2:87338849-87338868	MS.gene072880:CDS	45.0%
	TTGTTCTTAGCCAACCCAGT+TGG	+	chr3.2:87338974-87338993	None:intergenic	45.0%
!	AGAAAAGCTGGTAGTGTTGG+TGG	-	chr3.2:87338683-87338702	MS.gene072880:CDS	45.0%
!	AGGCAGAAGAATGCTTTAGG+TGG	-	chr3.2:87339682-87339701	MS.gene072880:CDS	45.0%
!	ATGAAGCCGGAGAGGATTTT+CGG	-	chr3.2:87338899-87338918	MS.gene072880:CDS	45.0%
!	CAGAAGAATGCTTTAGGTGG+TGG	-	chr3.2:87339685-87339704	MS.gene072880:CDS	45.0%
!	GAGAGCTAAAACAGGTGTTG+TGG	+	chr3.2:87339830-87339849	None:intergenic	45.0%
!	GAGGCTTTTGGATCGTTTCT+TGG	-	chr3.2:87338940-87338959	MS.gene072880:CDS	45.0%
!	GAGTCATTTGCAGAGGCTTT+TGG	-	chr3.2:87338928-87338947	MS.gene072880:CDS	45.0%
!	GGAGTATCCTGATTGTGTGA+AGG	-	chr3.2:87339099-87339118	MS.gene072880:CDS	45.0%
!	GGTGATGTGAATGAAGTGTC+GGG	-	chr3.2:87338833-87338852	MS.gene072880:CDS	45.0%
!	TAAGCTGGAAGTACAAGAGG+AGG	-	chr3.2:87339324-87339343	MS.gene072880:CDS	45.0%
!	TCCTAAGCTGGAAGTACAAG+AGG	-	chr3.2:87339321-87339340	MS.gene072880:CDS	45.0%
!	TCCTTTGAGGGATATGAAGC+CGG	-	chr3.2:87338886-87338905	MS.gene072880:CDS	45.0%
!	TGGTACTGGATACTATGCTG+GGG	-	chr3.2:87340044-87340063	MS.gene072880:CDS	45.0%
!!	CTGGGTTGGCTAAGAACAAT+AGG	-	chr3.2:87338975-87338994	MS.gene072880:CDS	45.0%
!!	GTGATGTGAATGAAGTGTCG+GGG	-	chr3.2:87338834-87338853	MS.gene072880:CDS	45.0%
!!	TGGATCGTTTCTTGGCTTGT+AGG	-	chr3.2:87338948-87338967	MS.gene072880:CDS	45.0%
	AAAAGCGATTGGAGCGGTGA+AGG	-	chr3.2:87338235-87338254	MS.gene072880:CDS	50.0%
	AATGCCCCCAGTTCATGGAA+TGG	-	chr3.2:87340083-87340102	MS.gene072880:CDS	50.0%
	ACAATCGCCACCTCCAATTC+CGG	+	chr3.2:87338305-87338324	None:intergenic	50.0%
	ACCAAGTCCTCCGTAAACTG+CGG	+	chr3.2:87339442-87339461	None:intergenic	50.0%
	ACCTCCCTCCTATGTGCAAA+TGG	-	chr3.2:87339915-87339934	MS.gene072880:CDS	50.0%
	ACTTCCGGCTGTCCATTTGA+TGG	+	chr3.2:87339577-87339596	None:intergenic	50.0%
	AGACACTGGAGGAGTTTGTG+AGG	-	chr3.2:87339254-87339273	MS.gene072880:CDS	50.0%
	AGCACTCCCTCCACTAAGTT+GGG	+	chr3.2:87339776-87339795	None:intergenic	50.0%
	AGCACTTCCCAACTTAGTGG+AGG	-	chr3.2:87339766-87339785	MS.gene072880:CDS	50.0%
	AGCCGGAAGTAACTTCAGCT+TGG	-	chr3.2:87339587-87339606	MS.gene072880:CDS	50.0%
	AGCGAAAGTAGCGAGCAACA+TGG	-	chr3.2:87338277-87338296	MS.gene072880:CDS	50.0%
	AGCTGTGGCATCAGTATGCA+AGG	-	chr3.2:87339980-87339999	MS.gene072880:CDS	50.0%
	AGGTCCCATTCCATGAACTG+GGG	+	chr3.2:87340091-87340110	None:intergenic	50.0%
	ATGAGGAAGACGAGGTCGTA+TGG	-	chr3.2:87338812-87338831	MS.gene072880:CDS	50.0%
	ATGCCCCCAGTTCATGGAAT+GGG	-	chr3.2:87340084-87340103	MS.gene072880:CDS	50.0%
	ATGGAATGGGACCTCCAAAC+GGG	-	chr3.2:87340097-87340116	MS.gene072880:CDS	50.0%
	ATTTGCACATAGGAGGGAGG+TGG	+	chr3.2:87339916-87339935	None:intergenic	50.0%
	CATGGAATGGGACCTCCAAA+CGG	-	chr3.2:87340096-87340115	MS.gene072880:CDS	50.0%
	CGGCTGTCCATTTGATGGAA+AGG	+	chr3.2:87339572-87339591	None:intergenic	50.0%
	GAAAGAGGAAGCTCCTAAGC+TGG	-	chr3.2:87339309-87339328	MS.gene072880:CDS	50.0%
	GACACTGGAGGAGTTTGTGA+GGG	-	chr3.2:87339255-87339274	MS.gene072880:CDS	50.0%
	GAGGTCCCATTCCATGAACT+GGG	+	chr3.2:87340092-87340111	None:intergenic	50.0%
	GCACTTCCCAACTTAGTGGA+GGG	-	chr3.2:87339767-87339786	MS.gene072880:CDS	50.0%
	GCGAACGGATCCTGATTAAC+TGG	+	chr3.2:87339877-87339896	None:intergenic	50.0%
	GCTGTGGCATCAGTATGCAA+GGG	-	chr3.2:87339981-87340000	MS.gene072880:CDS	50.0%
	GGACAATTTAGAGGGGAAGG+TGG	-	chr3.2:87338788-87338807	MS.gene072880:CDS	50.0%
	GGAGGAGTTTGTGAGGGATA+GGG	-	chr3.2:87339261-87339280	MS.gene072880:CDS	50.0%
	GGCATCAGTATGCAAGGGAT+GGG	-	chr3.2:87339986-87340005	MS.gene072880:CDS	50.0%
	GGGGTATAATTCTCAGGTGC+AGG	+	chr3.2:87339385-87339404	None:intergenic	50.0%
	GGTGGACAATTTAGAGGGGA+AGG	-	chr3.2:87338785-87338804	MS.gene072880:CDS	50.0%
	GTGAGCACTTCCCAACTTAG+TGG	-	chr3.2:87339763-87339782	MS.gene072880:CDS	50.0%
	TAGCACTCCCTCCACTAAGT+TGG	+	chr3.2:87339777-87339796	None:intergenic	50.0%
	TATGCAAGGGATGGGATGCA+AGG	-	chr3.2:87339994-87340013	MS.gene072880:CDS	50.0%
	TATGGAATGCCCCCAGTTCA+TGG	-	chr3.2:87340078-87340097	MS.gene072880:CDS	50.0%
	TCAGCTGTGTCCAAGCGATT+GGG	-	chr3.2:87338425-87338444	MS.gene072880:CDS	50.0%
	TCCGGCTTCATATCCCTCAA+AGG	+	chr3.2:87338890-87338909	None:intergenic	50.0%
	TCGGCCATTTGCACATAGGA+GGG	+	chr3.2:87339922-87339941	None:intergenic	50.0%
	TGGAGGAGTTTGTGAGGGAT+AGG	-	chr3.2:87339260-87339279	MS.gene072880:CDS	50.0%
	TGGCATCAGTATGCAAGGGA+TGG	-	chr3.2:87339985-87340004	MS.gene072880:CDS	50.0%
	TTCAGCTGTGTCCAAGCGAT+TGG	-	chr3.2:87338424-87338443	MS.gene072880:CDS	50.0%
	TTCGGCCATTTGCACATAGG+AGG	+	chr3.2:87339923-87339942	None:intergenic	50.0%
	TTGAACTTCCGGATACTCGG+AGG	+	chr3.2:87339212-87339231	None:intergenic	50.0%
	TTGTGAGGGATAGGGCTAAG+AGG	-	chr3.2:87339269-87339288	MS.gene072880:CDS	50.0%
!	ACAGGTGTTGTGGTCTTTCC+CGG	+	chr3.2:87339820-87339839	None:intergenic	50.0%
!	GGTACTGGATACTATGCTGG+GGG	-	chr3.2:87340045-87340064	MS.gene072880:CDS	50.0%
!	TCCTCCGTAAACTGCGGTTT+TGG	+	chr3.2:87339436-87339455	None:intergenic	50.0%
!	TGAACCTGGGAAAGCGGATT+GGG	-	chr3.2:87339624-87339643	MS.gene072880:CDS	50.0%
!	TGAAGCCGGAGAGGATTTTC+GGG	-	chr3.2:87338900-87338919	MS.gene072880:CDS	50.0%
!	TTTGCGTTGGCACTCTTTGC+TGG	-	chr3.2:87339508-87339527	MS.gene072880:CDS	50.0%
!!	AAAGCTGGTAGTGTTGGTGG+TGG	-	chr3.2:87338686-87338705	MS.gene072880:CDS	50.0%
!!	GGAGGACTTGGTGAATCTGA+GGG	-	chr3.2:87339450-87339469	MS.gene072880:CDS	50.0%
!!	TCACCGCTCCAATCGCTTTT+CGG	+	chr3.2:87338235-87338254	None:intergenic	50.0%
!!	TCTTGGCTTGTAGGCCAACT+GGG	-	chr3.2:87338957-87338976	MS.gene072880:CDS	50.0%
!!	TGAACTGGGGGCATTCCATA+AGG	+	chr3.2:87340078-87340097	None:intergenic	50.0%
!!	TTCTTGGCTTGTAGGCCAAC+TGG	-	chr3.2:87338956-87338975	MS.gene072880:CDS	50.0%
!!!	GTAAACTGCGGTTTTGGCTC+AGG	+	chr3.2:87339430-87339449	None:intergenic	50.0%
!!!	TGATGGAACGCCGATTTTCC+AGG	-	chr3.2:87338508-87338527	MS.gene072880:CDS	50.0%
	AAACCCCTGCAGCTGAACCT+GGG	-	chr3.2:87339611-87339630	MS.gene072880:CDS	55.0%
	AAGGTGGGATGAGGAAGACG+AGG	-	chr3.2:87338804-87338823	MS.gene072880:CDS	55.0%
	ACCGCAGTTTACGGAGGACT+TGG	-	chr3.2:87339438-87339457	MS.gene072880:CDS	55.0%
	ACTGGCTGCACAGATCCATC+TGG	+	chr3.2:87339859-87339878	None:intergenic	55.0%
	AGAGGCCAAAGAGTCCAGAG+AGG	-	chr3.2:87339287-87339306	MS.gene072880:CDS	55.0%
	AGTTCCCAATCCGCTTTCCC+AGG	+	chr3.2:87339631-87339650	None:intergenic	55.0%
	ATGCTACGAGGAGAGGGACT+AGG	-	chr3.2:87338543-87338562	MS.gene072880:CDS	55.0%
	CAGCTGTGTCCAAGCGATTG+GGG	-	chr3.2:87338426-87338445	MS.gene072880:CDS	55.0%
	CTGAACCTGGGAAAGCGGAT+TGG	-	chr3.2:87339623-87339642	MS.gene072880:CDS	55.0%
	CTGGCTGCACAGATCCATCT+GGG	+	chr3.2:87339858-87339877	None:intergenic	55.0%
	CTTTCCCAGGTTCAGCTGCA+GGG	+	chr3.2:87339618-87339637	None:intergenic	55.0%
	GACGAGTCACGACGAAGATC+CGG	-	chr3.2:87338331-87338350	MS.gene072880:CDS	55.0%
	GATTGGGGAAGACGCGTGAT+TGG	-	chr3.2:87338441-87338460	MS.gene072880:CDS	55.0%
	GCAGTCACTGCAGACGATCA+GGG	-	chr3.2:87339478-87339497	MS.gene072880:CDS	55.0%
	GCCAAAACCGCAGTTTACGG+AGG	-	chr3.2:87339432-87339451	MS.gene072880:CDS	55.0%
	GCCATTTGCACATAGGAGGG+AGG	+	chr3.2:87339919-87339938	None:intergenic	55.0%
	GGAGCTTCCTCTTTCCTCTC+TGG	+	chr3.2:87339304-87339323	None:intergenic	55.0%
	GGAGGTCCCATTCCATGAAC+TGG	+	chr3.2:87340093-87340112	None:intergenic	55.0%
	GGTCCCATTCCATGAACTGG+GGG	+	chr3.2:87340090-87340109	None:intergenic	55.0%
	GTGGGGATGAGAGGTTCAGT+GGG	-	chr3.2:87338717-87338736	MS.gene072880:CDS	55.0%
	TGAGGGATATGAAGCCGGAG+AGG	-	chr3.2:87338891-87338910	MS.gene072880:CDS	55.0%
	TGCAGCTGAACCTGGGAAAG+CGG	-	chr3.2:87339618-87339637	MS.gene072880:CDS	55.0%
	TGCAGTCACTGCAGACGATC+AGG	-	chr3.2:87339477-87339496	MS.gene072880:CDS	55.0%
	TGGCTGCACAGATCCATCTG+GGG	+	chr3.2:87339857-87339876	None:intergenic	55.0%
	TTAGAGGGGAAGGTGGGATG+AGG	-	chr3.2:87338795-87338814	MS.gene072880:CDS	55.0%
	TTGTGCATGAGCAGCAGCTG+TGG	-	chr3.2:87339965-87339984	MS.gene072880:CDS	55.0%
	TTTCCCAGGTTCAGCTGCAG+GGG	+	chr3.2:87339617-87339636	None:intergenic	55.0%
!	GGAAGTACAAGAGGAGGAGC+CGG	-	chr3.2:87339330-87339349	MS.gene072880:CDS	55.0%
!!	AGCGGATTGGGAACTGGCAT+TGG	-	chr3.2:87339636-87339655	MS.gene072880:CDS	55.0%
!!	CGGAGGACTTGGTGAATCTG+AGG	-	chr3.2:87339449-87339468	MS.gene072880:CDS	55.0%
!!	GGACTTGGTGAATCTGAGGG+AGG	-	chr3.2:87339453-87339472	MS.gene072880:CDS	55.0%
!!	GGGGGCATTCCATAAGGCAT+AGG	+	chr3.2:87340072-87340091	None:intergenic	55.0%
!!	GGTGGCGGGGTATAATTCTC+AGG	+	chr3.2:87339391-87339410	None:intergenic	55.0%
!!	TGGGAAAGCGGATTGGGAAC+TGG	-	chr3.2:87339630-87339649	MS.gene072880:CDS	55.0%
	ACGCGTCTTCCCCAATCGCT+TGG	+	chr3.2:87338438-87338457	None:intergenic	60.0%
	AGTAGCGAGCAACATGGCGC+CGG	-	chr3.2:87338283-87338302	MS.gene072880:CDS	60.0%
	CAAACCCCTGCAGCTGAACC+TGG	-	chr3.2:87339610-87339629	MS.gene072880:CDS	60.0%
	GCTGGGGGTCCTATGCCTTA+TGG	-	chr3.2:87340060-87340079	MS.gene072880:CDS	60.0%
	GCTTTCCCAGGTTCAGCTGC+AGG	+	chr3.2:87339619-87339638	None:intergenic	60.0%
	GGCACTCTTTGCTGGTGCAC+CGG	-	chr3.2:87339516-87339535	MS.gene072880:CDS	60.0%
	GGCGAGATCCTCCGAGTATC+CGG	-	chr3.2:87339201-87339220	MS.gene072880:CDS	60.0%
	GGCTTGTAGGCCAACTGGGT+TGG	-	chr3.2:87338961-87338980	MS.gene072880:CDS	60.0%
	GGGGCTGGGAGAGCTAAAAC+AGG	+	chr3.2:87339838-87339857	None:intergenic	60.0%
	GGTGGGGATGAGAGGTTCAG+TGG	-	chr3.2:87338716-87338735	MS.gene072880:CDS	60.0%
	GTTGTGGTCTTTCCCGGTCC+CGG	+	chr3.2:87339814-87339833	None:intergenic	60.0%
	TGCTAGCAGTGTGGCGTTGC+CGG	-	chr3.2:87339792-87339811	MS.gene072880:CDS	60.0%
!	ACAAGAGGAGGAGCCGGTTC+AGG	-	chr3.2:87339336-87339355	MS.gene072880:CDS	60.0%
!	CAACATGGCGCCGGAATTGG+AGG	-	chr3.2:87338292-87338311	MS.gene072880:CDS	60.0%
!	GAGCAACATGGCGCCGGAAT+TGG	-	chr3.2:87338289-87338308	MS.gene072880:CDS	60.0%
!	GCACAGATCCATCTGGGGCT+GGG	+	chr3.2:87339852-87339871	None:intergenic	60.0%
!	TGCACAGATCCATCTGGGGC+TGG	+	chr3.2:87339853-87339872	None:intergenic	60.0%
!	TTAGCTCTCCCAGCCCCAGA+TGG	-	chr3.2:87339841-87339860	MS.gene072880:CDS	60.0%
!	TTTGGCTCAGGCTCAGGCTC+TGG	+	chr3.2:87339418-87339437	None:intergenic	60.0%
!!	AGTGTTGGTGGTGGTGGTGG+AGG	-	chr3.2:87338695-87338714	MS.gene072880:CDS	60.0%
!!	GCTGGTAGTGTTGGTGGTGG+TGG	-	chr3.2:87338689-87338708	MS.gene072880:CDS	60.0%
!!	GGTAGTGTTGGTGGTGGTGG+TGG	-	chr3.2:87338692-87338711	MS.gene072880:CDS	60.0%
!!	TGGAGGGAGTGCTAGCAGTG+TGG	-	chr3.2:87339783-87339802	MS.gene072880:CDS	60.0%
!!	TTGGTGGTGGTGGTGGAGGT+GGG	-	chr3.2:87338699-87338718	MS.gene072880:CDS	60.0%
!!!	TGCGGTTTTGGCTCAGGCTC+AGG	+	chr3.2:87339424-87339443	None:intergenic	60.0%
	GCTAGCAGTGTGGCGTTGCC+GGG	-	chr3.2:87339793-87339812	MS.gene072880:CDS	65.0%
!	CATGGCGCCGGAATTGGAGG+TGG	-	chr3.2:87338295-87338314	MS.gene072880:CDS	65.0%
!	GTGGTGGAGGTGGGGATGAG+AGG	-	chr3.2:87338708-87338727	MS.gene072880:CDS	65.0%
!	TCAGGCTCAGGCTCTGGTGG+AGG	+	chr3.2:87339412-87339431	None:intergenic	65.0%
!	TCAGGCTCTGGTGGAGGTGG+CGG	+	chr3.2:87339406-87339425	None:intergenic	65.0%
!!	GTTGGTGGTGGTGGTGGAGG+TGG	-	chr3.2:87338698-87338717	MS.gene072880:CDS	65.0%
!!	TGGTGGTGGTGGTGGAGGTG+GGG	-	chr3.2:87338700-87338719	MS.gene072880:CDS	65.0%
	AGTGTGGCGTTGCCGGGACC+GGG	-	chr3.2:87339799-87339818	MS.gene072880:CDS	70.0%
	CAGTGTGGCGTTGCCGGGAC+CGG	-	chr3.2:87339798-87339817	MS.gene072880:CDS	70.0%
!	AGGCTCTGGTGGAGGTGGCG+GGG	+	chr3.2:87339404-87339423	None:intergenic	70.0%
!	CAGGCTCTGGTGGAGGTGGC+GGG	+	chr3.2:87339405-87339424	None:intergenic	70.0%
!	GGCTCAGGCTCAGGCTCTGG+TGG	+	chr3.2:87339415-87339434	None:intergenic	70.0%
!	GGCTCAGGCTCTGGTGGAGG+TGG	+	chr3.2:87339409-87339428	None:intergenic	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr3.2	gene	87338215	87340140	87338215	ID=MS.gene072880
chr3.2	mRNA	87338215	87340140	87338215	ID=MS.gene072880.t1;Parent=MS.gene072880
chr3.2	exon	87338215	87340140	87338215	ID=MS.gene072880.t1.exon1;Parent=MS.gene072880.t1
chr3.2	CDS	87338215	87340140	87338215	ID=cds.MS.gene072880.t1;Parent=MS.gene072880.t1

Gene Sequence

>MS.gene072880

ATGACTTCGAGCACAATCCGAAAAGCGATTGGAGCGGTGAAGGATCAGACGAGTATTGGAATAGCGAAAGTAGCGAGCAACATGGCGCCGGAATTGGAGGTGGCGATTGTGAAAGCGACGAGTCACGACGAAGATCCGGCGAGTGAGAAGTATATAAGAGAGATCTTGAACTTGATGTCTTACTCGCGTGGTTATGTGAACGCGTGTGTTTCAGCTGTGTCCAAGCGATTGGGGAAGACGCGTGATTGGATTGTTGCGTTGAAAGCTCTTATACTTGTTCATCGACTGATGAATGATGGAACGCCGATTTTCCAGGAAGAGATTATGTATGCTACGAGGAGAGGGACTAGGTTGTTGAATATGTCTGATTTTAGAGATGAGGCTCATTCAAGTTCTTGGGATCATTCTGCTTTTGTTAGGACTTATGCTTTGTATCTCGATCAGAGGCTTGAGTTGATGTTGTTTGATAGAAAAGCTGGTAGTGTTGGTGGTGGTGGTGGAGGTGGGGATGAGAGGTTCAGTGGGAGAGAAAATAATTTCAGGTCGCCACCGAATGAGTATGAGTATGGAGGTGGACAATTTAGAGGGGAAGGTGGGATGAGGAAGACGAGGTCGTATGGTGATGTGAATGAAGTGTCGGGGAATGATGATAGAAGGATTGTTACTGTGACTCCTTTGAGGGATATGAAGCCGGAGAGGATTTTCGGGAAGATGAGTCATTTGCAGAGGCTTTTGGATCGTTTCTTGGCTTGTAGGCCAACTGGGTTGGCTAAGAACAATAGGATGATTTTGATTGCATTGTATCCGTTGGTTAAGGAGAGTTTTCAGCTGTATGCTGATATATGCGAGGTTTTGGCAGTGTTGCTTGACAAATTCTTTGACATGGAGTATCCTGATTGTGTGAAGGCCTTTGATGCTTATGCAAGTGCTGCTAAACAGATTGATGAACTTGTGGCGTTTTACAATTGGTGTAAAGAAAGTGGTTTGGCGAGATCCTCCGAGTATCCGGAAGTTCAAAGAATTACTAGTAAGTTGTTGGAGACACTGGAGGAGTTTGTGAGGGATAGGGCTAAGAGGCCAAAGAGTCCAGAGAGGAAAGAGGAAGCTCCTAAGCTGGAAGTACAAGAGGAGGAGCCGGTTCAGGATATGAACGAGATCAAGGCACTGCCTGCACCTGAGAATTATACCCCGCCACCTCCACCAGAGCCTGAGCCTGAGCCAAAACCGCAGTTTACGGAGGACTTGGTGAATCTGAGGGAGGATGCAGTCACTGCAGACGATCAGGGTAATAGATTTGCGTTGGCACTCTTTGCTGGTGCACCGGCTAATAATAATGCAAATGGATCGTGGGAAGCCTTTCCATCAAATGGACAGCCGGAAGTAACTTCAGCTTGGCAAACCCCTGCAGCTGAACCTGGGAAAGCGGATTGGGAACTGGCATTGGTTGAGACAGCCAGCAATTTATCTAGGCAGAAGAATGCTTTAGGTGGTGGGCTTGATCCCTTATTGTTGAATGGCATGTATGATCAAGGAATGGTGAGGCAGCATGTGAGCACTTCCCAACTTAGTGGAGGGAGTGCTAGCAGTGTGGCGTTGCCGGGACCGGGAAAGACCACAACACCTGTTTTAGCTCTCCCAGCCCCAGATGGATCTGTGCAGCCAGTTAATCAGGATCCGTTCGCCGCATCATTGAACATTCCACCTCCCTCCTATGTGCAAATGGCCGAAATGGAGAAGAAGCAACAATTACTTGTGCATGAGCAGCAGCTGTGGCATCAGTATGCAAGGGATGGGATGCAAGGCCAGTCTAGCTTGAACAAAATGAACAATGGTACTGGATACTATGCTGGGGGTCCTATGCCTTATGGAATGCCCCCAGTTCATGGAATGGGACCTCCAAACGGGTATTACCATACTCCTATATGA

Protein sequence

>MS.gene072880.t1

MTSSTIRKAIGAVKDQTSIGIAKVASNMAPELEVAIVKATSHDEDPASEKYIREILNLMSYSRGYVNACVSAVSKRLGKTRDWIVALKALILVHRLMNDGTPIFQEEIMYATRRGTRLLNMSDFRDEAHSSSWDHSAFVRTYALYLDQRLELMLFDRKAGSVGGGGGGGDERFSGRENNFRSPPNEYEYGGGQFRGEGGMRKTRSYGDVNEVSGNDDRRIVTVTPLRDMKPERIFGKMSHLQRLLDRFLACRPTGLAKNNRMILIALYPLVKESFQLYADICEVLAVLLDKFFDMEYPDCVKAFDAYASAAKQIDELVAFYNWCKESGLARSSEYPEVQRITSKLLETLEEFVRDRAKRPKSPERKEEAPKLEVQEEEPVQDMNEIKALPAPENYTPPPPPEPEPEPKPQFTEDLVNLREDAVTADDQGNRFALALFAGAPANNNANGSWEAFPSNGQPEVTSAWQTPAAEPGKADWELALVETASNLSRQKNALGGGLDPLLLNGMYDQGMVRQHVSTSQLSGGSASSVALPGPGKTTTPVLALPAPDGSVQPVNQDPFAASLNIPPPSYVQMAEMEKKQQLLVHEQQLWHQYARDGMQGQSSLNKMNNGTGYYAGGPMPYGMPPVHGMGPPNGYYHTPI