Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073049.t1 | XP_003603582.1 | 98.9 | 439 | 5 | 0 | 1 | 439 | 1 | 439 | 6.80E-98 | 367.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073049.t1 | G7J2W4 | 98.9 | 439 | 5 | 0 | 1 | 439 | 1 | 439 | 4.9e-98 | 367.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene90626 | MS.gene073049 | PPI |
| MS.gene049260 | MS.gene073049 | PPI |
| MS.gene98540 | MS.gene073049 | PPI |
| MS.gene073049 | MS.gene013282 | PPI |
| MS.gene81658 | MS.gene073049 | PPI |
| MS.gene81663 | MS.gene073049 | PPI |
| MS.gene81660 | MS.gene073049 | PPI |
| MS.gene06367 | MS.gene073049 | PPI |
| MS.gene29768 | MS.gene073049 | PPI |
| MS.gene073049 | MS.gene40923 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073049.t1 | MTR_3g109330 | 98.633 | 439 | 6 | 0 | 1 | 439 | 1 | 439 | 0.0 | 868 |
| MS.gene073049.t1 | MTR_3g109330 | 94.533 | 439 | 6 | 1 | 1 | 439 | 1 | 421 | 0.0 | 817 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073049.t1 | AT4G31340 | 58.435 | 409 | 164 | 4 | 31 | 439 | 35 | 437 | 7.91e-165 | 471 |
| MS.gene073049.t1 | AT2G24420 | 54.545 | 429 | 184 | 5 | 17 | 439 | 17 | 440 | 3.85e-160 | 459 |
| MS.gene073049.t1 | AT2G24420 | 54.545 | 429 | 184 | 5 | 17 | 439 | 17 | 440 | 3.85e-160 | 459 |
| MS.gene073049.t1 | AT4G31340 | 58.442 | 385 | 156 | 2 | 31 | 415 | 35 | 415 | 6.24e-155 | 445 |
| MS.gene073049.t1 | AT4G30090 | 30.446 | 404 | 214 | 6 | 40 | 437 | 44 | 386 | 1.87e-52 | 181 |
Find 99 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGAATTGAGTTGATCTAAT+TGG | 0.198323 | 3.3:-89571451 | None:intergenic |
| AAGAAGGTTGTTCTCGCTTA+TGG | 0.201487 | 3.3:+89574517 | MS.gene073049:CDS |
| AAGTAACGAAGGAGAAAATT+AGG | 0.226102 | 3.3:-89571379 | None:intergenic |
| AAAAGGCACAAGCTGGAAAA+TGG | 0.236033 | 3.3:+89573896 | MS.gene073049:CDS |
| ACTCTAGCTATTAAGATAAT+AGG | 0.265678 | 3.3:-89575459 | None:intergenic |
| TATGCAGGCCTCTGCCCTTC+TGG | 0.268328 | 3.3:+89575431 | MS.gene073049:intron |
| GAAACTTATACCTGATAATA+AGG | 0.301355 | 3.3:-89574335 | None:intergenic |
| AACACAAGAATTGAAGAAAA+AGG | 0.318070 | 3.3:+89571783 | MS.gene073049:CDS |
| TTGGATTGATACCGAGGAAT+TGG | 0.318579 | 3.3:-89571478 | None:intergenic |
| GAATGAGGTTGCTTCTCTTC+AGG | 0.323946 | 3.3:+89571870 | MS.gene073049:CDS |
| ATTCTAGGCCCTAGAGAAAA+AGG | 0.331966 | 3.3:+89573879 | MS.gene073049:intron |
| ACCTCTTGCTACTAAAGAAT+TGG | 0.345133 | 3.3:+89575308 | MS.gene073049:CDS |
| GAATGCTACTCAACTTATCT+TGG | 0.345760 | 3.3:-89571837 | None:intergenic |
| ATCTAAGACTAACCAGAAAA+TGG | 0.347393 | 3.3:-89575490 | None:intergenic |
| TCTCGCTTATGGGAATTTCT+TGG | 0.348918 | 3.3:+89574528 | MS.gene073049:CDS |
| CTTCATGTTATCTACTTGTC+TGG | 0.380045 | 3.3:-89575720 | None:intergenic |
| ATGGTGCTTGGCTTCCTCCT+TGG | 0.385003 | 3.3:+89573540 | MS.gene073049:CDS |
| TATCATCTGCAGCAGCAAAA+AGG | 0.397213 | 3.3:+89575635 | MS.gene073049:intron |
| AGAAGGTTGTTCTCGCTTAT+GGG | 0.403445 | 3.3:+89574518 | MS.gene073049:CDS |
| ATGTGTAGATCCTTATTATC+AGG | 0.406758 | 3.3:+89574325 | MS.gene073049:CDS |
| GATACCGAGGAATTGGATCT+TGG | 0.433047 | 3.3:-89571471 | None:intergenic |
| GTCATTGGATGCCGAGGAGC+AGG | 0.448017 | 3.3:+89572065 | MS.gene073049:CDS |
| GGGAGCAAGTGCGTCCTTTG+AGG | 0.460893 | 3.3:-89574282 | None:intergenic |
| AGAAAGTGAACTGGGAATCT+CGG | 0.463402 | 3.3:+89572247 | MS.gene073049:CDS |
| AAAGGCACAAGCTGGAAAAT+GGG | 0.463620 | 3.3:+89573897 | MS.gene073049:CDS |
| GACCACTGTTCTTTCACAGC+TGG | 0.466702 | 3.3:-89574191 | None:intergenic |
| GTTGGAAGTGATATCTCAAA+AGG | 0.468095 | 3.3:+89573715 | MS.gene073049:CDS |
| CAGTGCTTGCACATGAGGTT+CGG | 0.473641 | 3.3:-89574231 | None:intergenic |
| TAGCAAGCCATACATTGATC+AGG | 0.474392 | 3.3:+89574435 | MS.gene073049:CDS |
| AGTAACGAAGGAGAAAATTA+GGG | 0.474409 | 3.3:-89571378 | None:intergenic |
| AGTCCGTGGCTGAGAGTCAT+TGG | 0.476512 | 3.3:+89573672 | MS.gene073049:intron |
| AAAACAGTGAGAAAGTGAAC+TGG | 0.480727 | 3.3:+89572238 | MS.gene073049:CDS |
| AGAACAACCTTCTTTGTGTA+GGG | 0.494541 | 3.3:-89574508 | None:intergenic |
| GAAGTCAGTGCTTGCACATG+AGG | 0.495088 | 3.3:-89574236 | None:intergenic |
| TTCGATGGAAACATCGGCCT+CGG | 0.496792 | 3.3:-89571402 | None:intergenic |
| TGTACACTATATTCGTAGTA+AGG | 0.505415 | 3.3:+89573568 | MS.gene073049:CDS |
| GAAAGTGAACTGGGAATCTC+GGG | 0.506911 | 3.3:+89572248 | MS.gene073049:CDS |
| CATTCAATCCTTGCAGAATG+AGG | 0.508270 | 3.3:+89571855 | MS.gene073049:CDS |
| ATGATCAGACTCATGGTGCT+TGG | 0.513875 | 3.3:+89573528 | MS.gene073049:intron |
| ACGTCTCTTGGACAGTAGCT+TGG | 0.519002 | 3.3:-89575263 | None:intergenic |
| TTGCTACTAAAGAATTGGAA+TGG | 0.520379 | 3.3:+89575313 | MS.gene073049:CDS |
| TATTTAGGAAGAAATGTTGA+AGG | 0.522472 | 3.3:+89573135 | MS.gene073049:intron |
| AGATAATAGGCAAGGCCAGA+AGG | 0.525870 | 3.3:-89575446 | None:intergenic |
| TCCAATTCTTTAGTAGCAAG+AGG | 0.528573 | 3.3:-89575309 | None:intergenic |
| AGCCACTGCATATCATCGCC+AGG | 0.534905 | 3.3:+89574555 | MS.gene073049:CDS |
| GTAGCGACCTGATCAATGTA+TGG | 0.537102 | 3.3:-89574442 | None:intergenic |
| AGCTTTACGACGAGTGTGGT+GGG | 0.538967 | 3.3:-89575685 | None:intergenic |
| TGCCGGTGAACTACAGAAGC+AGG | 0.548974 | 3.3:+89572107 | MS.gene073049:CDS |
| AGGCAAGGCCAGAAGGGCAG+AGG | 0.549576 | 3.3:-89575439 | None:intergenic |
| TGAACATGGGAAGCCTCTGT+TGG | 0.550076 | 3.3:+89573697 | MS.gene073049:CDS |
| GGAAAGGCTCATGCACGTGC+CGG | 0.552710 | 3.3:+89572090 | MS.gene073049:CDS |
| GAGAGTCATTGGAATGAACA+TGG | 0.556843 | 3.3:+89573683 | MS.gene073049:CDS |
| TTTCTCCTTCGTTACTTCCG+AGG | 0.559530 | 3.3:+89571385 | MS.gene073049:CDS |
| TGCCGAGGAGCAGGTTGGAA+AGG | 0.563199 | 3.3:+89572074 | MS.gene073049:CDS |
| ACAGGTTCAAAAGATAAATG+AGG | 0.567365 | 3.3:+89572968 | MS.gene073049:intron |
| TAGCTTTACGACGAGTGTGG+TGG | 0.567556 | 3.3:-89575686 | None:intergenic |
| AGAATCTTCGATGGAAACAT+CGG | 0.571464 | 3.3:-89571408 | None:intergenic |
| GAGAACAACCTTCTTTGTGT+AGG | 0.572587 | 3.3:-89574509 | None:intergenic |
| GATAATAGGCAAGGCCAGAA+GGG | 0.576847 | 3.3:-89575445 | None:intergenic |
| ATAGCGAAGACGAAAAGCTT+CGG | 0.580873 | 3.3:-89571347 | None:intergenic |
| GACCTGCTTCTGTAGTTCAC+CGG | 0.583896 | 3.3:-89572109 | None:intergenic |
| TGGGTGTTTCCACTTCGAGC+GGG | 0.584384 | 3.3:-89575666 | None:intergenic |
| GCTTAGCTTTACGACGAGTG+TGG | 0.588964 | 3.3:-89575689 | None:intergenic |
| AATTCCAAGATCCAATTCCT+CGG | 0.589768 | 3.3:+89571467 | MS.gene073049:CDS |
| AAAATGGGCTGAACCTCACG+TGG | 0.592865 | 3.3:+89573912 | MS.gene073049:CDS |
| ACTTGCTCCCCACTTGAACA+AGG | 0.596960 | 3.3:+89574295 | MS.gene073049:CDS |
| AGCCTTTCCAACCTGCTCCT+CGG | 0.598082 | 3.3:-89572076 | None:intergenic |
| TGAGATATCACTTCCAACAG+AGG | 0.601782 | 3.3:-89573710 | None:intergenic |
| AGCTATTAAGATAATAGGCA+AGG | 0.602545 | 3.3:-89575454 | None:intergenic |
| TCTGAAGCCCTACACAAAGA+AGG | 0.603321 | 3.3:+89574501 | MS.gene073049:CDS |
| ACTTGTATATTCTCAACATG+AGG | 0.604598 | 3.3:-89574475 | None:intergenic |
| GCAAGTAAACCCGCTCGAAG+TGG | 0.604975 | 3.3:+89575657 | MS.gene073049:CDS |
| TGAAGTTTACAAGTCCTCAA+AGG | 0.607940 | 3.3:+89574268 | MS.gene073049:CDS |
| GAAGGAGAAAATTAGGGCAA+CGG | 0.609746 | 3.3:-89571372 | None:intergenic |
| TTGGATGCCGAGGAGCAGGT+TGG | 0.613773 | 3.3:+89572069 | MS.gene073049:CDS |
| AGAGGAATCAGAATCTTCGA+TGG | 0.619773 | 3.3:-89571417 | None:intergenic |
| AAAAGGGTCATTGGATGCCG+AGG | 0.621224 | 3.3:+89572059 | MS.gene073049:CDS |
| TGATTTGAACTCAAAACTAG+AGG | 0.624974 | 3.3:+89572296 | MS.gene073049:CDS |
| AAACAGTGAGAAAGTGAACT+GGG | 0.625922 | 3.3:+89572239 | MS.gene073049:CDS |
| AATGTTGAAGGCAAAGCTAG+AGG | 0.629492 | 3.3:+89573147 | MS.gene073049:CDS |
| GTGGGTGTTTCCACTTCGAG+CGG | 0.630465 | 3.3:-89575667 | None:intergenic |
| CATTGATCAGGTCGCTACTG+CGG | 0.635282 | 3.3:+89574447 | MS.gene073049:CDS |
| ATCGGCCTCGGAAGTAACGA+AGG | 0.639450 | 3.3:-89571390 | None:intergenic |
| TAATTGGATCTTAAGAGCAG+AGG | 0.640351 | 3.3:-89571435 | None:intergenic |
| AGAAGCAACCTCATTCTGCA+AGG | 0.645724 | 3.3:-89571863 | None:intergenic |
| TCATGTTGAGAATATACAAG+TGG | 0.650587 | 3.3:+89574477 | MS.gene073049:CDS |
| ATTCCAATGACTCTCAGCCA+CGG | 0.657274 | 3.3:-89573675 | None:intergenic |
| ATATAGTGTACAGCAAGCCA+AGG | 0.657714 | 3.3:-89573557 | None:intergenic |
| GGTGTTAATGATCAGACTCA+TGG | 0.658662 | 3.3:+89573521 | MS.gene073049:intron |
| TAGTGTACAGCAAGCCAAGG+AGG | 0.659126 | 3.3:-89573554 | None:intergenic |
| GCGAAGACGAAAAGCTTCGG+AGG | 0.668584 | 3.3:-89571344 | None:intergenic |
| AGAGTCATTGGAATGAACAT+GGG | 0.671207 | 3.3:+89573684 | MS.gene073049:CDS |
| GTGGTCTGTGGTGAAAACAA+AGG | 0.688492 | 3.3:+89574208 | MS.gene073049:CDS |
| CAAAGCAAAAGAGCTGAGCG+AGG | 0.693194 | 3.3:+89573177 | MS.gene073049:CDS |
| AACCTGGCGATGATATGCAG+TGG | 0.697941 | 3.3:-89574557 | None:intergenic |
| ACGTGCTCTTAAAGTCGCCG+AGG | 0.698226 | 3.3:+89573019 | MS.gene073049:CDS |
| TGTGAAAGAACAGTGGTCTG+TGG | 0.702105 | 3.3:+89574196 | MS.gene073049:CDS |
| TTCCAGCTGTGAAAGAACAG+TGG | 0.708355 | 3.3:+89574189 | MS.gene073049:CDS |
| ACTCGTCGTAAAGCTAAGCG+AGG | 0.711196 | 3.3:+89575693 | MS.gene073049:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAAAAAATAATAATTTTGAA+GGG | - | chr3.3:89572032-89572051 | None:intergenic | 10.0% |
| !! | AAAAAAAAACAATTCAGTAT+GGG | - | chr3.3:89575536-89575555 | None:intergenic | 15.0% |
| !! | ACTAAAATATAAATATGGTT+AGG | + | chr3.3:89575380-89575399 | MS.gene073049:intron | 15.0% |
| !! | ATTCAAAAAAATAATACAAG+AGG | - | chr3.3:89574622-89574641 | None:intergenic | 15.0% |
| !!! | ATATAAGGAATTTTTTTACT+AGG | - | chr3.3:89573398-89573417 | None:intergenic | 15.0% |
| !!! | CTTAATTTTTTTTCATTAAG+TGG | - | chr3.3:89572834-89572853 | None:intergenic | 15.0% |
| !!! | GGAAAAAATAATAATTTTGA+AGG | - | chr3.3:89572033-89572052 | None:intergenic | 15.0% |
| !!! | TATCAAAACATAATTTTGTT+AGG | + | chr3.3:89572917-89572936 | MS.gene073049:intron | 15.0% |
| !!! | TCTTGTATTATTTTTTTGAA+TGG | + | chr3.3:89574621-89574640 | MS.gene073049:intron | 15.0% |
| !!! | TTATTTTATAGTAAACTATC+AGG | - | chr3.3:89573448-89573467 | None:intergenic | 15.0% |
| !!! | TTCTATTGATATTCTTATTT+AGG | + | chr3.3:89573120-89573139 | MS.gene073049:intron | 15.0% |
| !! | AAAAAAAAACTTGGTTCAAT+CGG | - | chr3.3:89571579-89571598 | None:intergenic | 20.0% |
| !! | AAAATATAAATATGGTTAGG+TGG | + | chr3.3:89575383-89575402 | MS.gene073049:intron | 20.0% |
| !! | AAATGCTTCAAAAATAATAC+AGG | - | chr3.3:89571954-89571973 | None:intergenic | 20.0% |
| !! | AATAAACTGACATTATTAGA+TGG | - | chr3.3:89572898-89572917 | None:intergenic | 20.0% |
| !! | AGATAAATATGATAGACTTA+CGG | - | chr3.3:89573950-89573969 | None:intergenic | 20.0% |
| !! | AGCAGAAATATATAAATAGT+AGG | - | chr3.3:89574596-89574615 | None:intergenic | 20.0% |
| !! | ATAAAATAAACTATCAGACA+AGG | + | chr3.3:89573459-89573478 | MS.gene073049:intron | 20.0% |
| !! | ATATCAAATTGAAATTATGC+AGG | + | chr3.3:89575416-89575435 | MS.gene073049:intron | 20.0% |
| !! | ATTATTAGATGATGTGAATA+AGG | - | chr3.3:89573634-89573653 | None:intergenic | 20.0% |
| !! | CAACATTTAAAAAGATTACA+TGG | - | chr3.3:89573230-89573249 | None:intergenic | 20.0% |
| !! | GAAAAAAAAACAATTCAGTA+TGG | - | chr3.3:89575537-89575556 | None:intergenic | 20.0% |
| !! | TAAAAAGATTACATGGTTTA+GGG | - | chr3.3:89573223-89573242 | None:intergenic | 20.0% |
| !! | TACCAATATCACATAATATA+AGG | - | chr3.3:89573413-89573432 | None:intergenic | 20.0% |
| !! | TTAAAAAGATTACATGGTTT+AGG | - | chr3.3:89573224-89573243 | None:intergenic | 20.0% |
| !! | TTCATCTATATACAAGAAAA+TGG | - | chr3.3:89573342-89573361 | None:intergenic | 20.0% |
| !! | TTCCTTATATTATGTGATAT+TGG | + | chr3.3:89573408-89573427 | MS.gene073049:intron | 20.0% |
| !!! | AATTATGATAACTGAGATTT+TGG | - | chr3.3:89571500-89571519 | None:intergenic | 20.0% |
| !!! | AGATTCTATTTTCAATTATC+TGG | - | chr3.3:89574873-89574892 | None:intergenic | 20.0% |
| !!! | ATAATCATGGATAACTTTTA+AGG | - | chr3.3:89573268-89573287 | None:intergenic | 20.0% |
| !!! | GTATTATTTTTGAAGCATTT+TGG | + | chr3.3:89571954-89571973 | MS.gene073049:intron | 20.0% |
| !!! | TATTATGTGATATTGGTAAT+TGG | + | chr3.3:89573415-89573434 | MS.gene073049:intron | 20.0% |
| !!! | TATTTTTTCCTCAGAAAAAA+GGG | + | chr3.3:89572043-89572062 | MS.gene073049:intron | 20.0% |
| !!! | TTATTTTTTCCTCAGAAAAA+AGG | + | chr3.3:89572042-89572061 | MS.gene073049:intron | 20.0% |
| !!! | TTTTATTAATTGATGCTTAC+TGG | + | chr3.3:89573500-89573519 | MS.gene073049:intron | 20.0% |
| !!! | TTTTTTTTCATTAAGTGGTT+AGG | - | chr3.3:89572829-89572848 | None:intergenic | 20.0% |
| ! | AAAAAGATTACATGGTTTAG+GGG | - | chr3.3:89573222-89573241 | None:intergenic | 25.0% |
| ! | AACACAAGAATTGAAGAAAA+AGG | + | chr3.3:89571783-89571802 | MS.gene073049:CDS | 25.0% |
| ! | ACTCTAGCTATTAAGATAAT+AGG | - | chr3.3:89575462-89575481 | None:intergenic | 25.0% |
| ! | CAAATACAACTAGAAATATC+AGG | - | chr3.3:89575581-89575600 | None:intergenic | 25.0% |
| ! | CTTCAATAAATTATAGATCC+AGG | + | chr3.3:89573787-89573806 | MS.gene073049:intron | 25.0% |
| ! | GAAACTTATACCTGATAATA+AGG | - | chr3.3:89574338-89574357 | None:intergenic | 25.0% |
| ! | GGCTAGTAATTTACAAATTT+AGG | + | chr3.3:89571685-89571704 | MS.gene073049:intron | 25.0% |
| ! | TAAATAAAATCACACATTGC+AGG | - | chr3.3:89574816-89574835 | None:intergenic | 25.0% |
| ! | TATTTAGGAAGAAATGTTGA+AGG | + | chr3.3:89573135-89573154 | MS.gene073049:intron | 25.0% |
| ! | TCAATTAGTTGAAATTACTG+AGG | + | chr3.3:89571652-89571671 | MS.gene073049:intron | 25.0% |
| ! | TCTTGTATATAGATGAATGA+AGG | + | chr3.3:89573345-89573364 | MS.gene073049:intron | 25.0% |
| ! | TTGAAAATAGAATCTTGAGT+TGG | + | chr3.3:89574878-89574897 | MS.gene073049:intron | 25.0% |
| ! | TTTAAGCAAATAACAACAAG+TGG | - | chr3.3:89572009-89572028 | None:intergenic | 25.0% |
| !! | AATTACTGAGGAAATTTTTG+TGG | + | chr3.3:89571664-89571683 | MS.gene073049:intron | 25.0% |
| !! | ATGAATCTTTTTCTCTAACT+TGG | - | chr3.3:89572277-89572296 | None:intergenic | 25.0% |
| !! | CTTTCATACTTTTGATCTTT+AGG | + | chr3.3:89573968-89573987 | MS.gene073049:intron | 25.0% |
| !! | GTTTGTTTATGTTTTTCTTG+AGG | + | chr3.3:89574378-89574397 | MS.gene073049:intron | 25.0% |
| !! | TCTTTTCATGATATGCTTTT+TGG | + | chr3.3:89575023-89575042 | MS.gene073049:intron | 25.0% |
| !! | TGAAGTAAATCTGAGTTTTA+TGG | + | chr3.3:89572360-89572379 | MS.gene073049:intron | 25.0% |
| !!! | GAATTGTCTTTTGTTATTCA+AGG | + | chr3.3:89575239-89575258 | MS.gene073049:intron | 25.0% |
| !!! | TCCTAGTTTGTTAAATACTT+GGG | + | chr3.3:89574112-89574131 | MS.gene073049:intron | 25.0% |
| !!! | TTAGGGATTTTTCAATCATT+AGG | + | chr3.3:89571919-89571938 | MS.gene073049:intron | 25.0% |
| AAAAAGGATCAAGTAATTGC+AGG | + | chr3.3:89571799-89571818 | MS.gene073049:CDS | 30.0% | |
| AAGTAACGAAGGAGAAAATT+AGG | - | chr3.3:89571382-89571401 | None:intergenic | 30.0% | |
| ACAACAACAACAAATACAAG+AGG | - | chr3.3:89574767-89574786 | None:intergenic | 30.0% | |
| ACAGGTTCAAAAGATAAATG+AGG | + | chr3.3:89572968-89572987 | MS.gene073049:intron | 30.0% | |
| ACTTGTATATTCTCAACATG+AGG | - | chr3.3:89574478-89574497 | None:intergenic | 30.0% | |
| AGAAGAAGAAGAATTAAACC+TGG | - | chr3.3:89573808-89573827 | None:intergenic | 30.0% | |
| AGACAATTCAACACTCAAAA+AGG | - | chr3.3:89575228-89575247 | None:intergenic | 30.0% | |
| AGCTATTAAGATAATAGGCA+AGG | - | chr3.3:89575457-89575476 | None:intergenic | 30.0% | |
| AGTAACGAAGGAGAAAATTA+GGG | - | chr3.3:89571381-89571400 | None:intergenic | 30.0% | |
| AGTTTCTTCATTGAACTGTA+TGG | + | chr3.3:89574352-89574371 | MS.gene073049:intron | 30.0% | |
| ATGTGTAGATCCTTATTATC+AGG | + | chr3.3:89574325-89574344 | MS.gene073049:CDS | 30.0% | |
| ATTGCAACATGATATAGACA+TGG | + | chr3.3:89575048-89575067 | MS.gene073049:intron | 30.0% | |
| ATTTCAAAGAATAAGCAGTG+AGG | - | chr3.3:89575138-89575157 | None:intergenic | 30.0% | |
| CACAAAATGATAAGCAGAAA+GGG | - | chr3.3:89575080-89575099 | None:intergenic | 30.0% | |
| CAGATAAAAAAAGTTAGCAG+AGG | - | chr3.3:89572678-89572697 | None:intergenic | 30.0% | |
| CATTTCTTCAGTTGAAAACA+GGG | - | chr3.3:89574167-89574186 | None:intergenic | 30.0% | |
| GATTGAAAAATCCCTAAAGA+GGG | - | chr3.3:89571916-89571935 | None:intergenic | 30.0% | |
| GTGATGTCATAATATCAAGT+TGG | - | chr3.3:89574965-89574984 | None:intergenic | 30.0% | |
| TATTAGTTCCAGATCTTGAA+CGG | + | chr3.3:89575161-89575180 | MS.gene073049:intron | 30.0% | |
| TCACAAAATGATAAGCAGAA+AGG | - | chr3.3:89575081-89575100 | None:intergenic | 30.0% | |
| TCATGTTGAGAATATACAAG+TGG | + | chr3.3:89574477-89574496 | MS.gene073049:CDS | 30.0% | |
| TGAGCGAGGTAATAATTTAT+TGG | + | chr3.3:89573191-89573210 | MS.gene073049:intron | 30.0% | |
| TGATTGAAAAATCCCTAAAG+AGG | - | chr3.3:89571917-89571936 | None:intergenic | 30.0% | |
| TGATTTGAACTCAAAACTAG+AGG | + | chr3.3:89572296-89572315 | MS.gene073049:CDS | 30.0% | |
| TGTACACTATATTCGTAGTA+AGG | + | chr3.3:89573568-89573587 | MS.gene073049:CDS | 30.0% | |
| TTGACTAGATTTCAGATTGT+GGG | - | chr3.3:89574940-89574959 | None:intergenic | 30.0% | |
| TTGCTACTAAAGAATTGGAA+TGG | + | chr3.3:89575313-89575332 | MS.gene073049:CDS | 30.0% | |
| TTTCAAAGAATAAGCAGTGA+GGG | - | chr3.3:89575137-89575156 | None:intergenic | 30.0% | |
| TTTGACTAGATTTCAGATTG+TGG | - | chr3.3:89574941-89574960 | None:intergenic | 30.0% | |
| ! | AACTTTCACATAGCCTATTT+TGG | + | chr3.3:89572730-89572749 | MS.gene073049:intron | 30.0% |
| ! | ACTTTCACATAGCCTATTTT+GGG | + | chr3.3:89572731-89572750 | MS.gene073049:intron | 30.0% |
| ! | ATCTAAGACTAACCAGAAAA+TGG | - | chr3.3:89575493-89575512 | None:intergenic | 30.0% |
| ! | CTGTTTTCAACTGAAGAAAT+GGG | + | chr3.3:89574166-89574185 | MS.gene073049:intron | 30.0% |
| ! | TAGTCTGAAATTCTTAATGC+AGG | + | chr3.3:89572185-89572204 | MS.gene073049:intron | 30.0% |
| ! | TCATTTATCTTTTGAACCTG+TGG | - | chr3.3:89572969-89572988 | None:intergenic | 30.0% |
| ! | TCTGCTTATCATTTTGTGAT+GGG | + | chr3.3:89575082-89575101 | MS.gene073049:intron | 30.0% |
| ! | TTCTGCTTATCATTTTGTGA+TGG | + | chr3.3:89575081-89575100 | MS.gene073049:intron | 30.0% |
| ! | TTTGTGAATCGTGATTTTTG+TGG | + | chr3.3:89571718-89571737 | MS.gene073049:intron | 30.0% |
| !! | CTCCTAGTTTGTTAAATACT+TGG | + | chr3.3:89574111-89574130 | MS.gene073049:intron | 30.0% |
| !! | TGGAATTGAGTTGATCTAAT+TGG | - | chr3.3:89571454-89571473 | None:intergenic | 30.0% |
| !! | TTTTCTTTTTTGTTAGTCCG+TGG | + | chr3.3:89573658-89573677 | MS.gene073049:intron | 30.0% |
| !!! | AGTTTTTTTTCTCCTTCATC+CGG | + | chr3.3:89574671-89574690 | MS.gene073049:intron | 30.0% |
| !!! | GGATAACTTTTAAGGTTTTC+TGG | - | chr3.3:89573260-89573279 | None:intergenic | 30.0% |
| !!! | TAACTTTTAAGGTTTTCTGG+TGG | - | chr3.3:89573257-89573276 | None:intergenic | 30.0% |
| AAAACAAACCGTTCAAGATC+TGG | - | chr3.3:89575172-89575191 | None:intergenic | 35.0% | |
| AAAACAGTGAGAAAGTGAAC+TGG | + | chr3.3:89572238-89572257 | MS.gene073049:CDS | 35.0% | |
| AAACAGTGAGAAAGTGAACT+GGG | + | chr3.3:89572239-89572258 | MS.gene073049:CDS | 35.0% | |
| AATAGGCTATGTGAAAGTTG+TGG | - | chr3.3:89572729-89572748 | None:intergenic | 35.0% | |
| AATCATTACACCTGCACATT+TGG | - | chr3.3:89572791-89572810 | None:intergenic | 35.0% | |
| AATTCCAAGATCCAATTCCT+CGG | + | chr3.3:89571467-89571486 | MS.gene073049:CDS | 35.0% | |
| ACAACAAATACAAGAGGATC+AGG | - | chr3.3:89574761-89574780 | None:intergenic | 35.0% | |
| ACCTCTTGCTACTAAAGAAT+TGG | + | chr3.3:89575308-89575327 | MS.gene073049:CDS | 35.0% | |
| ACGATGAGGAAACATTAGTA+TGG | - | chr3.3:89574987-89575006 | None:intergenic | 35.0% | |
| ACTAATGTTTCCTCATCGTA+GGG | + | chr3.3:89574988-89575007 | MS.gene073049:intron | 35.0% | |
| AGAACAACCTTCTTTGTGTA+GGG | - | chr3.3:89574511-89574530 | None:intergenic | 35.0% | |
| AGAATCTTCGATGGAAACAT+CGG | - | chr3.3:89571411-89571430 | None:intergenic | 35.0% | |
| AGAGTCATTGGAATGAACAT+GGG | + | chr3.3:89573684-89573703 | MS.gene073049:CDS | 35.0% | |
| ATAGGCTATGTGAAAGTTGT+GGG | - | chr3.3:89572728-89572747 | None:intergenic | 35.0% | |
| ATCAGGAGTAAGTGCATATA+TGG | - | chr3.3:89575564-89575583 | None:intergenic | 35.0% | |
| CATGATTATTACCAACAGTG+TGG | + | chr3.3:89573279-89573298 | MS.gene073049:intron | 35.0% | |
| CCAATGTTGAAACTCCTAAA+TGG | - | chr3.3:89574084-89574103 | None:intergenic | 35.0% | |
| CCATTTAGGAGTTTCAACAT+TGG | + | chr3.3:89574081-89574100 | MS.gene073049:intron | 35.0% | |
| CCATTTCTTCAGTTGAAAAC+AGG | - | chr3.3:89574168-89574187 | None:intergenic | 35.0% | |
| CGGGTAAAACAAACAAATTG+TGG | - | chr3.3:89574041-89574060 | None:intergenic | 35.0% | |
| GAATGCTACTCAACTTATCT+TGG | - | chr3.3:89571840-89571859 | None:intergenic | 35.0% | |
| GACACGTTAATAAAGCAATG+AGG | - | chr3.3:89572562-89572581 | None:intergenic | 35.0% | |
| GAGTAAGTGCATATATGGAA+AGG | - | chr3.3:89575559-89575578 | None:intergenic | 35.0% | |
| GCCCAAGTATTTAACAAACT+AGG | - | chr3.3:89574116-89574135 | None:intergenic | 35.0% | |
| GTTGGAAGTGATATCTCAAA+AGG | + | chr3.3:89573715-89573734 | MS.gene073049:CDS | 35.0% | |
| TAAATGGTCAACAAGCTATC+AGG | - | chr3.3:89574068-89574087 | None:intergenic | 35.0% | |
| TAATTGGATCTTAAGAGCAG+AGG | - | chr3.3:89571438-89571457 | None:intergenic | 35.0% | |
| TACTAATGTTTCCTCATCGT+AGG | + | chr3.3:89574987-89575006 | MS.gene073049:intron | 35.0% | |
| TCCAATTCTTTAGTAGCAAG+AGG | - | chr3.3:89575312-89575331 | None:intergenic | 35.0% | |
| TCTGGTGTAGATATACAGTA+TGG | - | chr3.3:89574855-89574874 | None:intergenic | 35.0% | |
| TGAAGTTTACAAGTCCTCAA+AGG | + | chr3.3:89574268-89574287 | MS.gene073049:CDS | 35.0% | |
| TTCCTAAATCGATGTTACTG+TGG | + | chr3.3:89571618-89571637 | MS.gene073049:intron | 35.0% | |
| ! | CCTGTTTTCAACTGAAGAAA+TGG | + | chr3.3:89574165-89574184 | MS.gene073049:intron | 35.0% |
| ! | TCTCGTCTTTTTGCAAAATG+AGG | + | chr3.3:89572514-89572533 | MS.gene073049:intron | 35.0% |
| ! | TTTCTTGAGGTATTCTCAAC+CGG | + | chr3.3:89574391-89574410 | MS.gene073049:intron | 35.0% |
| ! | TTTTCACTAGACCCTCTTTA+GGG | + | chr3.3:89571902-89571921 | MS.gene073049:intron | 35.0% |
| ! | TTTTCTTGCCAATGTTGTGT+AGG | + | chr3.3:89573066-89573085 | MS.gene073049:intron | 35.0% |
| !! | ATTCTTTTGCCTTGTTCAAG+TGG | - | chr3.3:89574307-89574326 | None:intergenic | 35.0% |
| !! | CACACTGTTGGTAATAATCA+TGG | - | chr3.3:89573281-89573300 | None:intergenic | 35.0% |
| !! | TGATAGCTTGTTGACCATTT+AGG | + | chr3.3:89574067-89574086 | MS.gene073049:intron | 35.0% |
| !! | TTCTTTTGCCTTGTTCAAGT+GGG | - | chr3.3:89574306-89574325 | None:intergenic | 35.0% |
| !!! | CAATTTGTTTGTTTTACCCG+TGG | + | chr3.3:89574041-89574060 | MS.gene073049:intron | 35.0% |
| !!! | GAGTTTTTTCTGCCATTTTC+TGG | + | chr3.3:89575478-89575497 | MS.gene073049:CDS | 35.0% |
| !!! | GTTTTTTTTCTCCTTCATCC+GGG | + | chr3.3:89574672-89574691 | MS.gene073049:intron | 35.0% |
| AAATACAAGAGGATCAGGAG+GGG | - | chr3.3:89574756-89574775 | None:intergenic | 40.0% | |
| AAATCCACCATCTAACCACA+GGG | - | chr3.3:89574011-89574030 | None:intergenic | 40.0% | |
| AAGAAGGTTGTTCTCGCTTA+TGG | + | chr3.3:89574517-89574536 | MS.gene073049:CDS | 40.0% | |
| AATGTTGAAGGCAAAGCTAG+AGG | + | chr3.3:89573147-89573166 | MS.gene073049:CDS | 40.0% | |
| ACAAATACAAGAGGATCAGG+AGG | - | chr3.3:89574758-89574777 | None:intergenic | 40.0% | |
| ACACGCACACAAACAAGAAT+AGG | - | chr3.3:89572392-89572411 | None:intergenic | 40.0% | |
| AGAAAGTGAACTGGGAATCT+CGG | + | chr3.3:89572247-89572266 | MS.gene073049:CDS | 40.0% | |
| AGAAGGTTGTTCTCGCTTAT+GGG | + | chr3.3:89574518-89574537 | MS.gene073049:CDS | 40.0% | |
| AGAGGAATCAGAATCTTCGA+TGG | - | chr3.3:89571420-89571439 | None:intergenic | 40.0% | |
| AGGAAAGTAAAGTCTGAACC+TGG | - | chr3.3:89574576-89574595 | None:intergenic | 40.0% | |
| ATAGCGAAGACGAAAAGCTT+CGG | - | chr3.3:89571350-89571369 | None:intergenic | 40.0% | |
| ATATAGTGTACAGCAAGCCA+AGG | - | chr3.3:89573560-89573579 | None:intergenic | 40.0% | |
| ATTCTAGGCCCTAGAGAAAA+AGG | + | chr3.3:89573879-89573898 | MS.gene073049:intron | 40.0% | |
| CAAATACAAGAGGATCAGGA+GGG | - | chr3.3:89574757-89574776 | None:intergenic | 40.0% | |
| CATTCAATCCTTGCAGAATG+AGG | + | chr3.3:89571855-89571874 | MS.gene073049:CDS | 40.0% | |
| CTATCAGACAAGGTGTATTG+TGG | + | chr3.3:89573469-89573488 | MS.gene073049:intron | 40.0% | |
| GAAGGAGAAAATTAGGGCAA+CGG | - | chr3.3:89571375-89571394 | None:intergenic | 40.0% | |
| GAGAACAACCTTCTTTGTGT+AGG | - | chr3.3:89574512-89574531 | None:intergenic | 40.0% | |
| GAGAGTCATTGGAATGAACA+TGG | + | chr3.3:89573683-89573702 | MS.gene073049:CDS | 40.0% | |
| GAGGATGTAAGTTGTACACT+TGG | + | chr3.3:89572315-89572334 | MS.gene073049:intron | 40.0% | |
| GGTGTAGATATACAGTATGG+AGG | - | chr3.3:89574852-89574871 | None:intergenic | 40.0% | |
| GGTGTTAATGATCAGACTCA+TGG | + | chr3.3:89573521-89573540 | MS.gene073049:intron | 40.0% | |
| TAGCAAGCCATACATTGATC+AGG | + | chr3.3:89574435-89574454 | MS.gene073049:CDS | 40.0% | |
| TATCATCTGCAGCAGCAAAA+AGG | + | chr3.3:89575635-89575654 | MS.gene073049:intron | 40.0% | |
| TCCTCAGAAAAAAGGGTCAT+TGG | + | chr3.3:89572050-89572069 | MS.gene073049:intron | 40.0% | |
| TCTCGCTTATGGGAATTTCT+TGG | + | chr3.3:89574528-89574547 | MS.gene073049:CDS | 40.0% | |
| TGAGATATCACTTCCAACAG+AGG | - | chr3.3:89573713-89573732 | None:intergenic | 40.0% | |
| TTAGATTGAAGCCACACTGT+TGG | - | chr3.3:89573293-89573312 | None:intergenic | 40.0% | |
| TTGAGTAGTGTATTCTCCAC+AGG | + | chr3.3:89572950-89572969 | MS.gene073049:intron | 40.0% | |
| TTGGATTGATACCGAGGAAT+TGG | - | chr3.3:89571481-89571500 | None:intergenic | 40.0% | |
| ! | AAAAGGCACAAGCTGGAAAA+TGG | + | chr3.3:89573896-89573915 | MS.gene073049:CDS | 40.0% |
| ! | AAAGGCACAAGCTGGAAAAT+GGG | + | chr3.3:89573897-89573916 | MS.gene073049:CDS | 40.0% |
| ! | AAGTTGTGGGAGTGTAGTAA+AGG | - | chr3.3:89572715-89572734 | None:intergenic | 40.0% |
| ! | ACGCTTTTCCTATGCATTCT+AGG | + | chr3.3:89573864-89573883 | MS.gene073049:intron | 40.0% |
| ! | AGCTTGTGCCTTTTTCTCTA+GGG | - | chr3.3:89573890-89573909 | None:intergenic | 40.0% |
| ! | CTTTTCACTAGACCCTCTTT+AGG | + | chr3.3:89571901-89571920 | MS.gene073049:intron | 40.0% |
| ! | GAGATTTTGGATTGATACCG+AGG | - | chr3.3:89571487-89571506 | None:intergenic | 40.0% |
| ! | TTTCTTTTCCCCTCTTGTCT+TGG | + | chr3.3:89572586-89572605 | MS.gene073049:intron | 40.0% |
| !! | CACCACAGTAACATCGATTT+AGG | - | chr3.3:89571623-89571642 | None:intergenic | 40.0% |
| !! | GTTTTAATCGTTTCCACGTG+AGG | - | chr3.3:89573928-89573947 | None:intergenic | 40.0% |
| !! | TAAGAGCACGTTCAGTTTTG+CGG | - | chr3.3:89573010-89573029 | None:intergenic | 40.0% |
| !! | TCTTTTGCCTTGTTCAAGTG+GGG | - | chr3.3:89574305-89574324 | None:intergenic | 40.0% |
| !!! | TCCAATGACCCTTTTTTCTG+AGG | - | chr3.3:89572054-89572073 | None:intergenic | 40.0% |
| ACCACCATCCTACACAACAT+TGG | - | chr3.3:89573077-89573096 | None:intergenic | 45.0% | |
| ACTCACAGTCTCACATACCT+CGG | - | chr3.3:89573039-89573058 | None:intergenic | 45.0% | |
| AGAAACCACCAAGACAAGAG+GGG | - | chr3.3:89572597-89572616 | None:intergenic | 45.0% | |
| AGAAGCAACCTCATTCTGCA+AGG | - | chr3.3:89571866-89571885 | None:intergenic | 45.0% | |
| AGATAATAGGCAAGGCCAGA+AGG | - | chr3.3:89575449-89575468 | None:intergenic | 45.0% | |
| ATGATCAGACTCATGGTGCT+TGG | + | chr3.3:89573528-89573547 | MS.gene073049:intron | 45.0% | |
| ATTCCAATGACTCTCAGCCA+CGG | - | chr3.3:89573678-89573697 | None:intergenic | 45.0% | |
| CAAATCCACCATCTAACCAC+AGG | - | chr3.3:89574012-89574031 | None:intergenic | 45.0% | |
| CAGAAACCACCAAGACAAGA+GGG | - | chr3.3:89572598-89572617 | None:intergenic | 45.0% | |
| CCACAGCAATGACCCAAAAT+AGG | - | chr3.3:89572746-89572765 | None:intergenic | 45.0% | |
| CTTGCCAATGTTGTGTAGGA+TGG | + | chr3.3:89573070-89573089 | MS.gene073049:intron | 45.0% | |
| GAAAGTGAACTGGGAATCTC+GGG | + | chr3.3:89572248-89572267 | MS.gene073049:CDS | 45.0% | |
| GAATGAGGTTGCTTCTCTTC+AGG | + | chr3.3:89571870-89571889 | MS.gene073049:CDS | 45.0% | |
| GATAATAGGCAAGGCCAGAA+GGG | - | chr3.3:89575448-89575467 | None:intergenic | 45.0% | |
| GATACCGAGGAATTGGATCT+TGG | - | chr3.3:89571474-89571493 | None:intergenic | 45.0% | |
| GTAGCGACCTGATCAATGTA+TGG | - | chr3.3:89574445-89574464 | None:intergenic | 45.0% | |
| GTGGTCTGTGGTGAAAACAA+AGG | + | chr3.3:89574208-89574227 | MS.gene073049:CDS | 45.0% | |
| TAATGATTCGTGGCCGCTAT+GGG | + | chr3.3:89572803-89572822 | MS.gene073049:intron | 45.0% | |
| TCAACAAGCTATCAGGACCA+CGG | - | chr3.3:89574061-89574080 | None:intergenic | 45.0% | |
| TCATCACTAGCCAAATGTGC+AGG | + | chr3.3:89572778-89572797 | MS.gene073049:intron | 45.0% | |
| TGGTTTCTGCTGAAAGTTGC+TGG | + | chr3.3:89572609-89572628 | MS.gene073049:intron | 45.0% | |
| TGTGAAAGAACAGTGGTCTG+TGG | + | chr3.3:89574196-89574215 | MS.gene073049:CDS | 45.0% | |
| TGTGCAGGTGTAATGATTCG+TGG | + | chr3.3:89572793-89572812 | MS.gene073049:intron | 45.0% | |
| TTAAGTGGTTAGGCCCATAG+CGG | - | chr3.3:89572819-89572838 | None:intergenic | 45.0% | |
| TTCCAGCTGTGAAAGAACAG+TGG | + | chr3.3:89574189-89574208 | MS.gene073049:CDS | 45.0% | |
| TTTCTCCTTCGTTACTTCCG+AGG | + | chr3.3:89571385-89571404 | MS.gene073049:CDS | 45.0% | |
| ! | CAGCTTGTGCCTTTTTCTCT+AGG | - | chr3.3:89573891-89573910 | None:intergenic | 45.0% |
| ! | CTAGAGAAAAAGGCACAAGC+TGG | + | chr3.3:89573889-89573908 | MS.gene073049:CDS | 45.0% |
| ! | TCTGAAGCCCTACACAAAGA+AGG | + | chr3.3:89574501-89574520 | MS.gene073049:CDS | 45.0% |
| ! | TGTGGGAGTGTAGTAAAGGT+GGG | - | chr3.3:89572711-89572730 | None:intergenic | 45.0% |
| ! | TTGTGGGAGTGTAGTAAAGG+TGG | - | chr3.3:89572712-89572731 | None:intergenic | 45.0% |
| !! | AGCTCAACTGGTTTGAGCTA+AGG | - | chr3.3:89574727-89574746 | None:intergenic | 45.0% |
| !! | CCTATTTTGGGTCATTGCTG+TGG | + | chr3.3:89572743-89572762 | MS.gene073049:intron | 45.0% |
| !! | GCTCAACTGGTTTGAGCTAA+GGG | - | chr3.3:89574726-89574745 | None:intergenic | 45.0% |
| !!! | CGTGCTTTTTCAACGTCTCT+TGG | - | chr3.3:89575278-89575297 | None:intergenic | 45.0% |
| !! | ATAAAAAAAAAAAAAAAACT+TGG | - | chr3.3:89571588-89571607 | None:intergenic | 5.0% |
| !! | TTATTACTAAAATATAAATA+TGG | + | chr3.3:89575375-89575394 | MS.gene073049:intron | 5.0% |
| !!! | ATATTTTAGTAATAATATTT+AGG | - | chr3.3:89575370-89575389 | None:intergenic | 5.0% |
| AAAAGGGTCATTGGATGCCG+AGG | + | chr3.3:89572059-89572078 | MS.gene073049:CDS | 50.0% | |
| AAATGAGGACGATGCCTGGA+AGG | + | chr3.3:89572529-89572548 | MS.gene073049:intron | 50.0% | |
| AACCTGGCGATGATATGCAG+TGG | - | chr3.3:89574560-89574579 | None:intergenic | 50.0% | |
| AATGAGGACGATGCCTGGAA+GGG | + | chr3.3:89572530-89572549 | MS.gene073049:intron | 50.0% | |
| ACGTCTCTTGGACAGTAGCT+TGG | - | chr3.3:89575266-89575285 | None:intergenic | 50.0% | |
| ACTCGTCGTAAAGCTAAGCG+AGG | + | chr3.3:89575693-89575712 | MS.gene073049:CDS | 50.0% | |
| ACTGCAATTACTGTGCCCTG+TGG | + | chr3.3:89573993-89574012 | MS.gene073049:intron | 50.0% | |
| ACTTGCTCCCCACTTGAACA+AGG | + | chr3.3:89574295-89574314 | MS.gene073049:CDS | 50.0% | |
| AGCTTTACGACGAGTGTGGT+GGG | - | chr3.3:89575688-89575707 | None:intergenic | 50.0% | |
| CAAAGCAAAAGAGCTGAGCG+AGG | + | chr3.3:89573177-89573196 | MS.gene073049:CDS | 50.0% | |
| CAACAAGCTATCAGGACCAC+GGG | - | chr3.3:89574060-89574079 | None:intergenic | 50.0% | |
| CAGTGCTTGCACATGAGGTT+CGG | - | chr3.3:89574234-89574253 | None:intergenic | 50.0% | |
| CATTGATCAGGTCGCTACTG+CGG | + | chr3.3:89574447-89574466 | MS.gene073049:CDS | 50.0% | |
| CTTTCGAGCTTCCTGTCAAC+CGG | - | chr3.3:89574413-89574432 | None:intergenic | 50.0% | |
| GAAGTCAGTGCTTGCACATG+AGG | - | chr3.3:89574239-89574258 | None:intergenic | 50.0% | |
| GACCACTGTTCTTTCACAGC+TGG | - | chr3.3:89574194-89574213 | None:intergenic | 50.0% | |
| GACCTGCTTCTGTAGTTCAC+CGG | - | chr3.3:89572112-89572131 | None:intergenic | 50.0% | |
| GCAGAAACCACCAAGACAAG+AGG | - | chr3.3:89572599-89572618 | None:intergenic | 50.0% | |
| GCCAATGTTGTGTAGGATGG+TGG | + | chr3.3:89573073-89573092 | MS.gene073049:intron | 50.0% | |
| GGTATTCTCAACCGGTTGAC+AGG | + | chr3.3:89574399-89574418 | MS.gene073049:intron | 50.0% | |
| GTAATGATTCGTGGCCGCTA+TGG | + | chr3.3:89572802-89572821 | MS.gene073049:intron | 50.0% | |
| TACTGTGCCCTGTGGTTAGA+TGG | + | chr3.3:89574001-89574020 | MS.gene073049:intron | 50.0% | |
| TAGTGTACAGCAAGCCAAGG+AGG | - | chr3.3:89573557-89573576 | None:intergenic | 50.0% | |
| TGAACATGGGAAGCCTCTGT+TGG | + | chr3.3:89573697-89573716 | MS.gene073049:CDS | 50.0% | |
| TGAGCTAAGGGATGAGGAGT+TGG | - | chr3.3:89574714-89574733 | None:intergenic | 50.0% | |
| TGCAAAATGAGGACGATGCC+TGG | + | chr3.3:89572525-89572544 | MS.gene073049:intron | 50.0% | |
| TGCTGCTGCTGTTGTTAGCA+AGG | + | chr3.3:89574790-89574809 | MS.gene073049:intron | 50.0% | |
| TTCGATGGAAACATCGGCCT+CGG | - | chr3.3:89571405-89571424 | None:intergenic | 50.0% | |
| ! | CTCGCTCAGCTCTTTTGCTT+TGG | - | chr3.3:89573179-89573198 | None:intergenic | 50.0% |
| ! | CTGGTTTGAGCTAAGGGATG+AGG | - | chr3.3:89574720-89574739 | None:intergenic | 50.0% |
| ! | CTTTTCCCCTCTTGTCTTGG+TGG | + | chr3.3:89572589-89572608 | MS.gene073049:intron | 50.0% |
| ! | TAGCTTTACGACGAGTGTGG+TGG | - | chr3.3:89575689-89575708 | None:intergenic | 50.0% |
| !! | AAAATGGGCTGAACCTCACG+TGG | + | chr3.3:89573912-89573931 | MS.gene073049:CDS | 50.0% |
| !! | CTCTAGGGCCTAGAATGCAT+AGG | - | chr3.3:89573875-89573894 | None:intergenic | 50.0% |
| !! | GCTTAGCTTTACGACGAGTG+TGG | - | chr3.3:89575692-89575711 | None:intergenic | 50.0% |
| AATGAGGACGATGCCCTTCC+AGG | - | chr3.3:89572546-89572565 | None:intergenic | 55.0% | |
| ACAAGAGGATCAGGAGGGGT+TGG | - | chr3.3:89574752-89574771 | None:intergenic | 55.0% | |
| ACACACAGCTCCCTACGATG+AGG | - | chr3.3:89575001-89575020 | None:intergenic | 55.0% | |
| ACGTGCTCTTAAAGTCGCCG+AGG | + | chr3.3:89573019-89573038 | MS.gene073049:CDS | 55.0% | |
| AGCCACTGCATATCATCGCC+AGG | + | chr3.3:89574555-89574574 | MS.gene073049:CDS | 55.0% | |
| AGCCTTTCCAACCTGCTCCT+CGG | - | chr3.3:89572079-89572098 | None:intergenic | 55.0% | |
| AGTCCGTGGCTGAGAGTCAT+TGG | + | chr3.3:89573672-89573691 | MS.gene073049:intron | 55.0% | |
| ATCGGCCTCGGAAGTAACGA+AGG | - | chr3.3:89571393-89571412 | None:intergenic | 55.0% | |
| ATGGTGCTTGGCTTCCTCCT+TGG | + | chr3.3:89573540-89573559 | MS.gene073049:CDS | 55.0% | |
| CAAGAGGATCAGGAGGGGTT+GGG | - | chr3.3:89574751-89574770 | None:intergenic | 55.0% | |
| CTTCATCCGGGTTTCAACCC+AGG | + | chr3.3:89574684-89574703 | MS.gene073049:intron | 55.0% | |
| GATGAGGAGTTGGAGGTCCT+GGG | - | chr3.3:89574704-89574723 | None:intergenic | 55.0% | |
| GCAAGTAAACCCGCTCGAAG+TGG | + | chr3.3:89575657-89575676 | MS.gene073049:CDS | 55.0% | |
| GCGAAGACGAAAAGCTTCGG+AGG | - | chr3.3:89571347-89571366 | None:intergenic | 55.0% | |
| GCTAAGGGATGAGGAGTTGG+AGG | - | chr3.3:89574711-89574730 | None:intergenic | 55.0% | |
| GTGGGTGTTTCCACTTCGAG+CGG | - | chr3.3:89575670-89575689 | None:intergenic | 55.0% | |
| TGCCGGTGAACTACAGAAGC+AGG | + | chr3.3:89572107-89572126 | MS.gene073049:CDS | 55.0% | |
| TGGGTGTTTCCACTTCGAGC+GGG | - | chr3.3:89575669-89575688 | None:intergenic | 55.0% | |
| TGTGCCCTGTGGTTAGATGG+TGG | + | chr3.3:89574004-89574023 | MS.gene073049:intron | 55.0% | |
| ! | CTGGGTTGAAACCCGGATGA+AGG | - | chr3.3:89574686-89574705 | None:intergenic | 55.0% |
| GAGGGGTTGGGTAGCTCAAC+TGG | - | chr3.3:89574739-89574758 | None:intergenic | 60.0% | |
| GGAAAGGCTCATGCACGTGC+CGG | + | chr3.3:89572090-89572109 | MS.gene073049:CDS | 60.0% | |
| GGATGAGGAGTTGGAGGTCC+TGG | - | chr3.3:89574705-89574724 | None:intergenic | 60.0% | |
| GGGAGCAAGTGCGTCCTTTG+AGG | - | chr3.3:89574285-89574304 | None:intergenic | 60.0% | |
| GTCATTGGATGCCGAGGAGC+AGG | + | chr3.3:89572065-89572084 | MS.gene073049:CDS | 60.0% | |
| TATGCAGGCCTCTGCCCTTC+TGG | + | chr3.3:89575431-89575450 | MS.gene073049:intron | 60.0% | |
| TTGGATGCCGAGGAGCAGGT+TGG | + | chr3.3:89572069-89572088 | MS.gene073049:CDS | 60.0% | |
| ! | GGAGGTCCTGGGTTGAAACC+CGG | - | chr3.3:89574693-89574712 | None:intergenic | 60.0% |
| ! | TGCCGAGGAGCAGGTTGGAA+AGG | + | chr3.3:89572074-89572093 | MS.gene073049:CDS | 60.0% |
| AGGCAAGGCCAGAAGGGCAG+AGG | - | chr3.3:89575442-89575461 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 89571338 | 89575731 | 89571338 | ID=MS.gene073049 |
| chr3.3 | mRNA | 89571338 | 89575731 | 89571338 | ID=MS.gene073049.t1;Parent=MS.gene073049 |
| chr3.3 | exon | 89571338 | 89571488 | 89571338 | ID=MS.gene073049.t1.exon1;Parent=MS.gene073049.t1 |
| chr3.3 | CDS | 89571338 | 89571488 | 89571338 | ID=cds.MS.gene073049.t1;Parent=MS.gene073049.t1 |
| chr3.3 | exon | 89571764 | 89571891 | 89571764 | ID=MS.gene073049.t1.exon2;Parent=MS.gene073049.t1 |
| chr3.3 | CDS | 89571764 | 89571891 | 89571764 | ID=cds.MS.gene073049.t1;Parent=MS.gene073049.t1 |
| chr3.3 | exon | 89572057 | 89572128 | 89572057 | ID=MS.gene073049.t1.exon3;Parent=MS.gene073049.t1 |
| chr3.3 | CDS | 89572057 | 89572128 | 89572057 | ID=cds.MS.gene073049.t1;Parent=MS.gene073049.t1 |
| chr3.3 | exon | 89572207 | 89572320 | 89572207 | ID=MS.gene073049.t1.exon4;Parent=MS.gene073049.t1 |
| chr3.3 | CDS | 89572207 | 89572320 | 89572207 | ID=cds.MS.gene073049.t1;Parent=MS.gene073049.t1 |
| chr3.3 | exon | 89572972 | 89573040 | 89572972 | ID=MS.gene073049.t1.exon5;Parent=MS.gene073049.t1 |
| chr3.3 | CDS | 89572972 | 89573040 | 89572972 | ID=cds.MS.gene073049.t1;Parent=MS.gene073049.t1 |
| chr3.3 | exon | 89573142 | 89573198 | 89573142 | ID=MS.gene073049.t1.exon6;Parent=MS.gene073049.t1 |
| chr3.3 | CDS | 89573142 | 89573198 | 89573142 | ID=cds.MS.gene073049.t1;Parent=MS.gene073049.t1 |
| chr3.3 | exon | 89573536 | 89573589 | 89573536 | ID=MS.gene073049.t1.exon7;Parent=MS.gene073049.t1 |
| chr3.3 | CDS | 89573536 | 89573589 | 89573536 | ID=cds.MS.gene073049.t1;Parent=MS.gene073049.t1 |
| chr3.3 | exon | 89573674 | 89573736 | 89573674 | ID=MS.gene073049.t1.exon8;Parent=MS.gene073049.t1 |
| chr3.3 | CDS | 89573674 | 89573736 | 89573674 | ID=cds.MS.gene073049.t1;Parent=MS.gene073049.t1 |
| chr3.3 | exon | 89573886 | 89573948 | 89573886 | ID=MS.gene073049.t1.exon9;Parent=MS.gene073049.t1 |
| chr3.3 | CDS | 89573886 | 89573948 | 89573886 | ID=cds.MS.gene073049.t1;Parent=MS.gene073049.t1 |
| chr3.3 | exon | 89574182 | 89574346 | 89574182 | ID=MS.gene073049.t1.exon10;Parent=MS.gene073049.t1 |
| chr3.3 | CDS | 89574182 | 89574346 | 89574182 | ID=cds.MS.gene073049.t1;Parent=MS.gene073049.t1 |
| chr3.3 | exon | 89574421 | 89574576 | 89574421 | ID=MS.gene073049.t1.exon11;Parent=MS.gene073049.t1 |
| chr3.3 | CDS | 89574421 | 89574576 | 89574421 | ID=cds.MS.gene073049.t1;Parent=MS.gene073049.t1 |
| chr3.3 | exon | 89575261 | 89575341 | 89575261 | ID=MS.gene073049.t1.exon12;Parent=MS.gene073049.t1 |
| chr3.3 | CDS | 89575261 | 89575341 | 89575261 | ID=cds.MS.gene073049.t1;Parent=MS.gene073049.t1 |
| chr3.3 | exon | 89575438 | 89575499 | 89575438 | ID=MS.gene073049.t1.exon13;Parent=MS.gene073049.t1 |
| chr3.3 | CDS | 89575438 | 89575499 | 89575438 | ID=cds.MS.gene073049.t1;Parent=MS.gene073049.t1 |
| chr3.3 | exon | 89575647 | 89575731 | 89575647 | ID=MS.gene073049.t1.exon14;Parent=MS.gene073049.t1 |
| chr3.3 | CDS | 89575647 | 89575731 | 89575647 | ID=cds.MS.gene073049.t1;Parent=MS.gene073049.t1 |
| Gene Sequence |
| Protein sequence |
