Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073050.t1 | XP_003603582.1 | 98.9 | 439 | 5 | 0 | 1 | 439 | 1 | 439 | 6.80E-98 | 367.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073050.t1 | G7J2W4 | 98.9 | 439 | 5 | 0 | 1 | 439 | 1 | 439 | 4.9e-98 | 367.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050105 | MS.gene073050 | 0.801589 | 8.38E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene013282 | MS.gene073050 | PPI |
| MS.gene81658 | MS.gene073050 | PPI |
| MS.gene81663 | MS.gene073050 | PPI |
| MS.gene81660 | MS.gene073050 | PPI |
| MS.gene06367 | MS.gene073050 | PPI |
| MS.gene29768 | MS.gene073050 | PPI |
| MS.gene98540 | MS.gene073050 | PPI |
| MS.gene90626 | MS.gene073050 | PPI |
| MS.gene049260 | MS.gene073050 | PPI |
| MS.gene40923 | MS.gene073050 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073050.t1 | MTR_3g109330 | 98.633 | 439 | 6 | 0 | 1 | 439 | 1 | 439 | 0.0 | 868 |
| MS.gene073050.t1 | MTR_3g109330 | 94.533 | 439 | 6 | 1 | 1 | 439 | 1 | 421 | 0.0 | 817 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073050.t1 | AT4G31340 | 58.435 | 409 | 164 | 4 | 31 | 439 | 35 | 437 | 7.91e-165 | 471 |
| MS.gene073050.t1 | AT2G24420 | 54.545 | 429 | 184 | 5 | 17 | 439 | 17 | 440 | 3.85e-160 | 459 |
| MS.gene073050.t1 | AT2G24420 | 54.545 | 429 | 184 | 5 | 17 | 439 | 17 | 440 | 3.85e-160 | 459 |
| MS.gene073050.t1 | AT4G31340 | 58.442 | 385 | 156 | 2 | 31 | 415 | 35 | 415 | 6.24e-155 | 445 |
| MS.gene073050.t1 | AT4G30090 | 30.446 | 404 | 214 | 6 | 40 | 437 | 44 | 386 | 1.87e-52 | 181 |
Find 99 sgRNAs with CRISPR-Local
Find 292 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGAATTGAGTTGATCTAAT+TGG | 0.198323 | 3.3:-89584543 | None:intergenic |
| AAGAAGGTTGTTCTCGCTTA+TGG | 0.201487 | 3.3:+89587609 | MS.gene073050:CDS |
| AAGTAACGAAGGAGAAAATT+AGG | 0.226102 | 3.3:-89584471 | None:intergenic |
| AAAAGGCACAAGCTGGAAAA+TGG | 0.236033 | 3.3:+89586988 | MS.gene073050:CDS |
| ACTCTAGCTATTAAGATAAT+AGG | 0.265678 | 3.3:-89588551 | None:intergenic |
| TATGCAGGCCTCTGCCCTTC+TGG | 0.268328 | 3.3:+89588523 | MS.gene073050:intron |
| GAAACTTATACCTGATAATA+AGG | 0.301355 | 3.3:-89587427 | None:intergenic |
| AACACAAGAATTGAAGAAAA+AGG | 0.318070 | 3.3:+89584875 | MS.gene073050:CDS |
| TTGGATTGATACCGAGGAAT+TGG | 0.318579 | 3.3:-89584570 | None:intergenic |
| GAATGAGGTTGCTTCTCTTC+AGG | 0.323946 | 3.3:+89584962 | MS.gene073050:CDS |
| ATTCTAGGCCCTAGAGAAAA+AGG | 0.331966 | 3.3:+89586971 | MS.gene073050:intron |
| ACCTCTTGCTACTAAAGAAT+TGG | 0.345133 | 3.3:+89588400 | MS.gene073050:CDS |
| GAATGCTACTCAACTTATCT+TGG | 0.345760 | 3.3:-89584929 | None:intergenic |
| ATCTAAGACTAACCAGAAAA+TGG | 0.347393 | 3.3:-89588582 | None:intergenic |
| TCTCGCTTATGGGAATTTCT+TGG | 0.348918 | 3.3:+89587620 | MS.gene073050:CDS |
| CTTCATGTTATCTACTTGTC+TGG | 0.380045 | 3.3:-89588812 | None:intergenic |
| ATGGTGCTTGGCTTCCTCCT+TGG | 0.385003 | 3.3:+89586632 | MS.gene073050:CDS |
| TATCATCTGCAGCAGCAAAA+AGG | 0.397213 | 3.3:+89588727 | MS.gene073050:intron |
| AGAAGGTTGTTCTCGCTTAT+GGG | 0.403445 | 3.3:+89587610 | MS.gene073050:CDS |
| ATGTGTAGATCCTTATTATC+AGG | 0.406758 | 3.3:+89587417 | MS.gene073050:CDS |
| GATACCGAGGAATTGGATCT+TGG | 0.433047 | 3.3:-89584563 | None:intergenic |
| GTCATTGGATGCCGAGGAGC+AGG | 0.448017 | 3.3:+89585157 | MS.gene073050:CDS |
| GGGAGCAAGTGCGTCCTTTG+AGG | 0.460893 | 3.3:-89587374 | None:intergenic |
| AGAAAGTGAACTGGGAATCT+CGG | 0.463402 | 3.3:+89585339 | MS.gene073050:CDS |
| AAAGGCACAAGCTGGAAAAT+GGG | 0.463620 | 3.3:+89586989 | MS.gene073050:CDS |
| GACCACTGTTCTTTCACAGC+TGG | 0.466702 | 3.3:-89587283 | None:intergenic |
| GTTGGAAGTGATATCTCAAA+AGG | 0.468095 | 3.3:+89586807 | MS.gene073050:CDS |
| CAGTGCTTGCACATGAGGTT+CGG | 0.473641 | 3.3:-89587323 | None:intergenic |
| TAGCAAGCCATACATTGATC+AGG | 0.474392 | 3.3:+89587527 | MS.gene073050:CDS |
| AGTAACGAAGGAGAAAATTA+GGG | 0.474409 | 3.3:-89584470 | None:intergenic |
| AGTCCGTGGCTGAGAGTCAT+TGG | 0.476512 | 3.3:+89586764 | MS.gene073050:intron |
| AAAACAGTGAGAAAGTGAAC+TGG | 0.480727 | 3.3:+89585330 | MS.gene073050:CDS |
| AGAACAACCTTCTTTGTGTA+GGG | 0.494541 | 3.3:-89587600 | None:intergenic |
| GAAGTCAGTGCTTGCACATG+AGG | 0.495088 | 3.3:-89587328 | None:intergenic |
| TTCGATGGAAACATCGGCCT+CGG | 0.496792 | 3.3:-89584494 | None:intergenic |
| TGTACACTATATTCGTAGTA+AGG | 0.505415 | 3.3:+89586660 | MS.gene073050:CDS |
| GAAAGTGAACTGGGAATCTC+GGG | 0.506911 | 3.3:+89585340 | MS.gene073050:CDS |
| CATTCAATCCTTGCAGAATG+AGG | 0.508270 | 3.3:+89584947 | MS.gene073050:CDS |
| ATGATCAGACTCATGGTGCT+TGG | 0.513875 | 3.3:+89586620 | MS.gene073050:intron |
| ACGTCTCTTGGACAGTAGCT+TGG | 0.519002 | 3.3:-89588355 | None:intergenic |
| TTGCTACTAAAGAATTGGAA+TGG | 0.520379 | 3.3:+89588405 | MS.gene073050:CDS |
| TATTTAGGAAGAAATGTTGA+AGG | 0.522472 | 3.3:+89586227 | MS.gene073050:intron |
| AGATAATAGGCAAGGCCAGA+AGG | 0.525870 | 3.3:-89588538 | None:intergenic |
| TCCAATTCTTTAGTAGCAAG+AGG | 0.528573 | 3.3:-89588401 | None:intergenic |
| AGCCACTGCATATCATCGCC+AGG | 0.534905 | 3.3:+89587647 | MS.gene073050:CDS |
| GTAGCGACCTGATCAATGTA+TGG | 0.537102 | 3.3:-89587534 | None:intergenic |
| AGCTTTACGACGAGTGTGGT+GGG | 0.538967 | 3.3:-89588777 | None:intergenic |
| TGCCGGTGAACTACAGAAGC+AGG | 0.548974 | 3.3:+89585199 | MS.gene073050:CDS |
| AGGCAAGGCCAGAAGGGCAG+AGG | 0.549576 | 3.3:-89588531 | None:intergenic |
| TGAACATGGGAAGCCTCTGT+TGG | 0.550076 | 3.3:+89586789 | MS.gene073050:CDS |
| GGAAAGGCTCATGCACGTGC+CGG | 0.552710 | 3.3:+89585182 | MS.gene073050:CDS |
| GAGAGTCATTGGAATGAACA+TGG | 0.556843 | 3.3:+89586775 | MS.gene073050:CDS |
| TTTCTCCTTCGTTACTTCCG+AGG | 0.559530 | 3.3:+89584477 | MS.gene073050:CDS |
| TGCCGAGGAGCAGGTTGGAA+AGG | 0.563199 | 3.3:+89585166 | MS.gene073050:CDS |
| ACAGGTTCAAAAGATAAATG+AGG | 0.567365 | 3.3:+89586060 | MS.gene073050:intron |
| TAGCTTTACGACGAGTGTGG+TGG | 0.567556 | 3.3:-89588778 | None:intergenic |
| AGAATCTTCGATGGAAACAT+CGG | 0.571464 | 3.3:-89584500 | None:intergenic |
| GAGAACAACCTTCTTTGTGT+AGG | 0.572587 | 3.3:-89587601 | None:intergenic |
| GATAATAGGCAAGGCCAGAA+GGG | 0.576847 | 3.3:-89588537 | None:intergenic |
| ATAGCGAAGACGAAAAGCTT+CGG | 0.580873 | 3.3:-89584439 | None:intergenic |
| GACCTGCTTCTGTAGTTCAC+CGG | 0.583896 | 3.3:-89585201 | None:intergenic |
| TGGGTGTTTCCACTTCGAGC+GGG | 0.584384 | 3.3:-89588758 | None:intergenic |
| GCTTAGCTTTACGACGAGTG+TGG | 0.588964 | 3.3:-89588781 | None:intergenic |
| AATTCCAAGATCCAATTCCT+CGG | 0.589768 | 3.3:+89584559 | MS.gene073050:CDS |
| AAAATGGGCTGAACCTCACG+TGG | 0.592865 | 3.3:+89587004 | MS.gene073050:CDS |
| ACTTGCTCCCCACTTGAACA+AGG | 0.596960 | 3.3:+89587387 | MS.gene073050:CDS |
| AGCCTTTCCAACCTGCTCCT+CGG | 0.598082 | 3.3:-89585168 | None:intergenic |
| TGAGATATCACTTCCAACAG+AGG | 0.601782 | 3.3:-89586802 | None:intergenic |
| AGCTATTAAGATAATAGGCA+AGG | 0.602545 | 3.3:-89588546 | None:intergenic |
| TCTGAAGCCCTACACAAAGA+AGG | 0.603321 | 3.3:+89587593 | MS.gene073050:CDS |
| ACTTGTATATTCTCAACATG+AGG | 0.604598 | 3.3:-89587567 | None:intergenic |
| GCAAGTAAACCCGCTCGAAG+TGG | 0.604975 | 3.3:+89588749 | MS.gene073050:CDS |
| TGAAGTTTACAAGTCCTCAA+AGG | 0.607940 | 3.3:+89587360 | MS.gene073050:CDS |
| GAAGGAGAAAATTAGGGCAA+CGG | 0.609746 | 3.3:-89584464 | None:intergenic |
| TTGGATGCCGAGGAGCAGGT+TGG | 0.613773 | 3.3:+89585161 | MS.gene073050:CDS |
| AGAGGAATCAGAATCTTCGA+TGG | 0.619773 | 3.3:-89584509 | None:intergenic |
| AAAAGGGTCATTGGATGCCG+AGG | 0.621224 | 3.3:+89585151 | MS.gene073050:CDS |
| TGATTTGAACTCAAAACTAG+AGG | 0.624974 | 3.3:+89585388 | MS.gene073050:CDS |
| AAACAGTGAGAAAGTGAACT+GGG | 0.625922 | 3.3:+89585331 | MS.gene073050:CDS |
| AATGTTGAAGGCAAAGCTAG+AGG | 0.629492 | 3.3:+89586239 | MS.gene073050:CDS |
| GTGGGTGTTTCCACTTCGAG+CGG | 0.630465 | 3.3:-89588759 | None:intergenic |
| CATTGATCAGGTCGCTACTG+CGG | 0.635282 | 3.3:+89587539 | MS.gene073050:CDS |
| ATCGGCCTCGGAAGTAACGA+AGG | 0.639450 | 3.3:-89584482 | None:intergenic |
| TAATTGGATCTTAAGAGCAG+AGG | 0.640351 | 3.3:-89584527 | None:intergenic |
| AGAAGCAACCTCATTCTGCA+AGG | 0.645724 | 3.3:-89584955 | None:intergenic |
| TCATGTTGAGAATATACAAG+TGG | 0.650587 | 3.3:+89587569 | MS.gene073050:CDS |
| ATTCCAATGACTCTCAGCCA+CGG | 0.657274 | 3.3:-89586767 | None:intergenic |
| ATATAGTGTACAGCAAGCCA+AGG | 0.657714 | 3.3:-89586649 | None:intergenic |
| GGTGTTAATGATCAGACTCA+TGG | 0.658662 | 3.3:+89586613 | MS.gene073050:intron |
| TAGTGTACAGCAAGCCAAGG+AGG | 0.659126 | 3.3:-89586646 | None:intergenic |
| GCGAAGACGAAAAGCTTCGG+AGG | 0.668584 | 3.3:-89584436 | None:intergenic |
| AGAGTCATTGGAATGAACAT+GGG | 0.671207 | 3.3:+89586776 | MS.gene073050:CDS |
| GTGGTCTGTGGTGAAAACAA+AGG | 0.688492 | 3.3:+89587300 | MS.gene073050:CDS |
| CAAAGCAAAAGAGCTGAGCG+AGG | 0.693194 | 3.3:+89586269 | MS.gene073050:CDS |
| AACCTGGCGATGATATGCAG+TGG | 0.697941 | 3.3:-89587649 | None:intergenic |
| ACGTGCTCTTAAAGTCGCCG+AGG | 0.698226 | 3.3:+89586111 | MS.gene073050:CDS |
| TGTGAAAGAACAGTGGTCTG+TGG | 0.702105 | 3.3:+89587288 | MS.gene073050:CDS |
| TTCCAGCTGTGAAAGAACAG+TGG | 0.708355 | 3.3:+89587281 | MS.gene073050:CDS |
| ACTCGTCGTAAAGCTAAGCG+AGG | 0.711196 | 3.3:+89588785 | MS.gene073050:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAAAAAATAATAATTTTGAA+GGG | - | chr3.3:89585124-89585143 | None:intergenic | 10.0% |
| !! | AAAAAAAAACAATTCAGTAT+GGG | - | chr3.3:89588628-89588647 | None:intergenic | 15.0% |
| !! | ACTAAAATATAAATATGGTT+AGG | + | chr3.3:89588472-89588491 | MS.gene073050:intron | 15.0% |
| !! | ATTCAAAAAAATAATACAAG+AGG | - | chr3.3:89587714-89587733 | None:intergenic | 15.0% |
| !!! | ATATAAGGAATTTTTTTACT+AGG | - | chr3.3:89586490-89586509 | None:intergenic | 15.0% |
| !!! | CTTAATTTTTTTTCATTAAG+TGG | - | chr3.3:89585926-89585945 | None:intergenic | 15.0% |
| !!! | GGAAAAAATAATAATTTTGA+AGG | - | chr3.3:89585125-89585144 | None:intergenic | 15.0% |
| !!! | TATCAAAACATAATTTTGTT+AGG | + | chr3.3:89586009-89586028 | MS.gene073050:intron | 15.0% |
| !!! | TCTTGTATTATTTTTTTGAA+TGG | + | chr3.3:89587713-89587732 | MS.gene073050:intron | 15.0% |
| !!! | TTATTTTATAGTAAACTATC+AGG | - | chr3.3:89586540-89586559 | None:intergenic | 15.0% |
| !!! | TTCTATTGATATTCTTATTT+AGG | + | chr3.3:89586212-89586231 | MS.gene073050:intron | 15.0% |
| !! | AAAAAAAAACTTGGTTCAAT+CGG | - | chr3.3:89584671-89584690 | None:intergenic | 20.0% |
| !! | AAAATATAAATATGGTTAGG+TGG | + | chr3.3:89588475-89588494 | MS.gene073050:intron | 20.0% |
| !! | AAATGCTTCAAAAATAATAC+AGG | - | chr3.3:89585046-89585065 | None:intergenic | 20.0% |
| !! | AATAAACTGACATTATTAGA+TGG | - | chr3.3:89585990-89586009 | None:intergenic | 20.0% |
| !! | AGATAAATATGATAGACTTA+CGG | - | chr3.3:89587042-89587061 | None:intergenic | 20.0% |
| !! | AGCAGAAATATATAAATAGT+AGG | - | chr3.3:89587688-89587707 | None:intergenic | 20.0% |
| !! | ATAAAATAAACTATCAGACA+AGG | + | chr3.3:89586551-89586570 | MS.gene073050:intron | 20.0% |
| !! | ATATCAAATTGAAATTATGC+AGG | + | chr3.3:89588508-89588527 | MS.gene073050:intron | 20.0% |
| !! | ATTATTAGATGATGTGAATA+AGG | - | chr3.3:89586726-89586745 | None:intergenic | 20.0% |
| !! | CAACATTTAAAAAGATTACA+TGG | - | chr3.3:89586322-89586341 | None:intergenic | 20.0% |
| !! | GAAAAAAAAACAATTCAGTA+TGG | - | chr3.3:89588629-89588648 | None:intergenic | 20.0% |
| !! | TAAAAAGATTACATGGTTTA+GGG | - | chr3.3:89586315-89586334 | None:intergenic | 20.0% |
| !! | TACCAATATCACATAATATA+AGG | - | chr3.3:89586505-89586524 | None:intergenic | 20.0% |
| !! | TTAAAAAGATTACATGGTTT+AGG | - | chr3.3:89586316-89586335 | None:intergenic | 20.0% |
| !! | TTCATCTATATACAAGAAAA+TGG | - | chr3.3:89586434-89586453 | None:intergenic | 20.0% |
| !! | TTCCTTATATTATGTGATAT+TGG | + | chr3.3:89586500-89586519 | MS.gene073050:intron | 20.0% |
| !!! | AATTATGATAACTGAGATTT+TGG | - | chr3.3:89584592-89584611 | None:intergenic | 20.0% |
| !!! | AGATTCTATTTTCAATTATC+TGG | - | chr3.3:89587965-89587984 | None:intergenic | 20.0% |
| !!! | ATAATCATGGATAACTTTTA+AGG | - | chr3.3:89586360-89586379 | None:intergenic | 20.0% |
| !!! | GTATTATTTTTGAAGCATTT+TGG | + | chr3.3:89585046-89585065 | MS.gene073050:intron | 20.0% |
| !!! | TATTATGTGATATTGGTAAT+TGG | + | chr3.3:89586507-89586526 | MS.gene073050:intron | 20.0% |
| !!! | TATTTTTTCCTCAGAAAAAA+GGG | + | chr3.3:89585135-89585154 | MS.gene073050:intron | 20.0% |
| !!! | TTATTTTTTCCTCAGAAAAA+AGG | + | chr3.3:89585134-89585153 | MS.gene073050:intron | 20.0% |
| !!! | TTTTATTAATTGATGCTTAC+TGG | + | chr3.3:89586592-89586611 | MS.gene073050:intron | 20.0% |
| !!! | TTTTTTTTCATTAAGTGGTT+AGG | - | chr3.3:89585921-89585940 | None:intergenic | 20.0% |
| ! | AAAAAGATTACATGGTTTAG+GGG | - | chr3.3:89586314-89586333 | None:intergenic | 25.0% |
| ! | AACACAAGAATTGAAGAAAA+AGG | + | chr3.3:89584875-89584894 | MS.gene073050:CDS | 25.0% |
| ! | ACTCTAGCTATTAAGATAAT+AGG | - | chr3.3:89588554-89588573 | None:intergenic | 25.0% |
| ! | CAAATACAACTAGAAATATC+AGG | - | chr3.3:89588673-89588692 | None:intergenic | 25.0% |
| ! | CTTCAATAAATTATAGATCC+AGG | + | chr3.3:89586879-89586898 | MS.gene073050:intron | 25.0% |
| ! | GAAACTTATACCTGATAATA+AGG | - | chr3.3:89587430-89587449 | None:intergenic | 25.0% |
| ! | GGCTAGTAATTTACAAATTT+AGG | + | chr3.3:89584777-89584796 | MS.gene073050:intron | 25.0% |
| ! | TAAATAAAATCACACATTGC+AGG | - | chr3.3:89587908-89587927 | None:intergenic | 25.0% |
| ! | TATTTAGGAAGAAATGTTGA+AGG | + | chr3.3:89586227-89586246 | MS.gene073050:intron | 25.0% |
| ! | TCAATTAGTTGAAATTACTG+AGG | + | chr3.3:89584744-89584763 | MS.gene073050:intron | 25.0% |
| ! | TCTTGTATATAGATGAATGA+AGG | + | chr3.3:89586437-89586456 | MS.gene073050:intron | 25.0% |
| ! | TTGAAAATAGAATCTTGAGT+TGG | + | chr3.3:89587970-89587989 | MS.gene073050:intron | 25.0% |
| ! | TTTAAGCAAATAACAACAAG+TGG | - | chr3.3:89585101-89585120 | None:intergenic | 25.0% |
| !! | AATTACTGAGGAAATTTTTG+TGG | + | chr3.3:89584756-89584775 | MS.gene073050:intron | 25.0% |
| !! | ATGAATCTTTTTCTCTAACT+TGG | - | chr3.3:89585369-89585388 | None:intergenic | 25.0% |
| !! | CTTTCATACTTTTGATCTTT+AGG | + | chr3.3:89587060-89587079 | MS.gene073050:intron | 25.0% |
| !! | GTTTGTTTATGTTTTTCTTG+AGG | + | chr3.3:89587470-89587489 | MS.gene073050:intron | 25.0% |
| !! | TCTTTTCATGATATGCTTTT+TGG | + | chr3.3:89588115-89588134 | MS.gene073050:intron | 25.0% |
| !! | TGAAGTAAATCTGAGTTTTA+TGG | + | chr3.3:89585452-89585471 | MS.gene073050:intron | 25.0% |
| !!! | GAATTGTCTTTTGTTATTCA+AGG | + | chr3.3:89588331-89588350 | MS.gene073050:intron | 25.0% |
| !!! | TCCTAGTTTGTTAAATACTT+GGG | + | chr3.3:89587204-89587223 | MS.gene073050:intron | 25.0% |
| !!! | TTAGGGATTTTTCAATCATT+AGG | + | chr3.3:89585011-89585030 | MS.gene073050:intron | 25.0% |
| AAAAAGGATCAAGTAATTGC+AGG | + | chr3.3:89584891-89584910 | MS.gene073050:CDS | 30.0% | |
| AAGTAACGAAGGAGAAAATT+AGG | - | chr3.3:89584474-89584493 | None:intergenic | 30.0% | |
| ACAACAACAACAAATACAAG+AGG | - | chr3.3:89587859-89587878 | None:intergenic | 30.0% | |
| ACAGGTTCAAAAGATAAATG+AGG | + | chr3.3:89586060-89586079 | MS.gene073050:intron | 30.0% | |
| ACTTGTATATTCTCAACATG+AGG | - | chr3.3:89587570-89587589 | None:intergenic | 30.0% | |
| AGAAGAAGAAGAATTAAACC+TGG | - | chr3.3:89586900-89586919 | None:intergenic | 30.0% | |
| AGACAATTCAACACTCAAAA+AGG | - | chr3.3:89588320-89588339 | None:intergenic | 30.0% | |
| AGCTATTAAGATAATAGGCA+AGG | - | chr3.3:89588549-89588568 | None:intergenic | 30.0% | |
| AGTAACGAAGGAGAAAATTA+GGG | - | chr3.3:89584473-89584492 | None:intergenic | 30.0% | |
| AGTTTCTTCATTGAACTGTA+TGG | + | chr3.3:89587444-89587463 | MS.gene073050:intron | 30.0% | |
| ATGTGTAGATCCTTATTATC+AGG | + | chr3.3:89587417-89587436 | MS.gene073050:CDS | 30.0% | |
| ATTGCAACATGATATAGACA+TGG | + | chr3.3:89588140-89588159 | MS.gene073050:intron | 30.0% | |
| ATTTCAAAGAATAAGCAGTG+AGG | - | chr3.3:89588230-89588249 | None:intergenic | 30.0% | |
| CACAAAATGATAAGCAGAAA+GGG | - | chr3.3:89588172-89588191 | None:intergenic | 30.0% | |
| CAGATAAAAAAAGTTAGCAG+AGG | - | chr3.3:89585770-89585789 | None:intergenic | 30.0% | |
| CATTTCTTCAGTTGAAAACA+GGG | - | chr3.3:89587259-89587278 | None:intergenic | 30.0% | |
| GATTGAAAAATCCCTAAAGA+GGG | - | chr3.3:89585008-89585027 | None:intergenic | 30.0% | |
| GTGATGTCATAATATCAAGT+TGG | - | chr3.3:89588057-89588076 | None:intergenic | 30.0% | |
| TATTAGTTCCAGATCTTGAA+CGG | + | chr3.3:89588253-89588272 | MS.gene073050:intron | 30.0% | |
| TCACAAAATGATAAGCAGAA+AGG | - | chr3.3:89588173-89588192 | None:intergenic | 30.0% | |
| TCATGTTGAGAATATACAAG+TGG | + | chr3.3:89587569-89587588 | MS.gene073050:CDS | 30.0% | |
| TGAGCGAGGTAATAATTTAT+TGG | + | chr3.3:89586283-89586302 | MS.gene073050:intron | 30.0% | |
| TGATTGAAAAATCCCTAAAG+AGG | - | chr3.3:89585009-89585028 | None:intergenic | 30.0% | |
| TGATTTGAACTCAAAACTAG+AGG | + | chr3.3:89585388-89585407 | MS.gene073050:CDS | 30.0% | |
| TGTACACTATATTCGTAGTA+AGG | + | chr3.3:89586660-89586679 | MS.gene073050:CDS | 30.0% | |
| TTGACTAGATTTCAGATTGT+GGG | - | chr3.3:89588032-89588051 | None:intergenic | 30.0% | |
| TTGCTACTAAAGAATTGGAA+TGG | + | chr3.3:89588405-89588424 | MS.gene073050:CDS | 30.0% | |
| TTTCAAAGAATAAGCAGTGA+GGG | - | chr3.3:89588229-89588248 | None:intergenic | 30.0% | |
| TTTGACTAGATTTCAGATTG+TGG | - | chr3.3:89588033-89588052 | None:intergenic | 30.0% | |
| ! | AACTTTCACATTGCCTATTT+TGG | + | chr3.3:89585822-89585841 | MS.gene073050:intron | 30.0% |
| ! | ACTTTCACATTGCCTATTTT+GGG | + | chr3.3:89585823-89585842 | MS.gene073050:intron | 30.0% |
| ! | ATCTAAGACTAACCAGAAAA+TGG | - | chr3.3:89588585-89588604 | None:intergenic | 30.0% |
| ! | CTGTTTTCAACTGAAGAAAT+GGG | + | chr3.3:89587258-89587277 | MS.gene073050:intron | 30.0% |
| ! | TAGTCTGAAATTCTTAATGC+AGG | + | chr3.3:89585277-89585296 | MS.gene073050:intron | 30.0% |
| ! | TCATTTATCTTTTGAACCTG+TGG | - | chr3.3:89586061-89586080 | None:intergenic | 30.0% |
| ! | TCTGCTTATCATTTTGTGAT+GGG | + | chr3.3:89588174-89588193 | MS.gene073050:intron | 30.0% |
| ! | TTCTGCTTATCATTTTGTGA+TGG | + | chr3.3:89588173-89588192 | MS.gene073050:intron | 30.0% |
| ! | TTTGTGAATCGTGATTTTTG+TGG | + | chr3.3:89584810-89584829 | MS.gene073050:intron | 30.0% |
| !! | CTCCTAGTTTGTTAAATACT+TGG | + | chr3.3:89587203-89587222 | MS.gene073050:intron | 30.0% |
| !! | TGGAATTGAGTTGATCTAAT+TGG | - | chr3.3:89584546-89584565 | None:intergenic | 30.0% |
| !! | TTTTCTTTTTTGTTAGTCCG+TGG | + | chr3.3:89586750-89586769 | MS.gene073050:intron | 30.0% |
| !!! | AGTTTTTTTTCTCCTTCATC+CGG | + | chr3.3:89587763-89587782 | MS.gene073050:intron | 30.0% |
| !!! | GGATAACTTTTAAGGTTTTC+TGG | - | chr3.3:89586352-89586371 | None:intergenic | 30.0% |
| !!! | TAACTTTTAAGGTTTTCTGG+TGG | - | chr3.3:89586349-89586368 | None:intergenic | 30.0% |
| AAAACAAACCGTTCAAGATC+TGG | - | chr3.3:89588264-89588283 | None:intergenic | 35.0% | |
| AAAACAGTGAGAAAGTGAAC+TGG | + | chr3.3:89585330-89585349 | MS.gene073050:CDS | 35.0% | |
| AAACAGTGAGAAAGTGAACT+GGG | + | chr3.3:89585331-89585350 | MS.gene073050:CDS | 35.0% | |
| AATAGGCAATGTGAAAGTTG+TGG | - | chr3.3:89585821-89585840 | None:intergenic | 35.0% | |
| AATCATTACACCTGCACATT+TGG | - | chr3.3:89585883-89585902 | None:intergenic | 35.0% | |
| AATTCCAAGATCCAATTCCT+CGG | + | chr3.3:89584559-89584578 | MS.gene073050:CDS | 35.0% | |
| ACAACAAATACAAGAGGATC+AGG | - | chr3.3:89587853-89587872 | None:intergenic | 35.0% | |
| ACCTCTTGCTACTAAAGAAT+TGG | + | chr3.3:89588400-89588419 | MS.gene073050:CDS | 35.0% | |
| ACGATGAGGAAACATTAGTA+TGG | - | chr3.3:89588079-89588098 | None:intergenic | 35.0% | |
| ACTAATGTTTCCTCATCGTA+GGG | + | chr3.3:89588080-89588099 | MS.gene073050:intron | 35.0% | |
| AGAACAACCTTCTTTGTGTA+GGG | - | chr3.3:89587603-89587622 | None:intergenic | 35.0% | |
| AGAATCTTCGATGGAAACAT+CGG | - | chr3.3:89584503-89584522 | None:intergenic | 35.0% | |
| AGAGTCATTGGAATGAACAT+GGG | + | chr3.3:89586776-89586795 | MS.gene073050:CDS | 35.0% | |
| ATAGGCAATGTGAAAGTTGT+GGG | - | chr3.3:89585820-89585839 | None:intergenic | 35.0% | |
| ATCAGGAGTAAGTGCATATA+TGG | - | chr3.3:89588656-89588675 | None:intergenic | 35.0% | |
| CATGATTATTACCAACAGTG+TGG | + | chr3.3:89586371-89586390 | MS.gene073050:intron | 35.0% | |
| CCAATGTTGAAACTCCTAAA+TGG | - | chr3.3:89587176-89587195 | None:intergenic | 35.0% | |
| CCATTTAGGAGTTTCAACAT+TGG | + | chr3.3:89587173-89587192 | MS.gene073050:intron | 35.0% | |
| CCATTTCTTCAGTTGAAAAC+AGG | - | chr3.3:89587260-89587279 | None:intergenic | 35.0% | |
| CGGGTAAAACAAACAAATTG+TGG | - | chr3.3:89587133-89587152 | None:intergenic | 35.0% | |
| GAATGCTACTCAACTTATCT+TGG | - | chr3.3:89584932-89584951 | None:intergenic | 35.0% | |
| GACACGTTAATAAAGCAATG+AGG | - | chr3.3:89585654-89585673 | None:intergenic | 35.0% | |
| GAGTAAGTGCATATATGGAA+AGG | - | chr3.3:89588651-89588670 | None:intergenic | 35.0% | |
| GCCCAAGTATTTAACAAACT+AGG | - | chr3.3:89587208-89587227 | None:intergenic | 35.0% | |
| GTTGGAAGTGATATCTCAAA+AGG | + | chr3.3:89586807-89586826 | MS.gene073050:CDS | 35.0% | |
| TAAATGGTCAACAAGCTATC+AGG | - | chr3.3:89587160-89587179 | None:intergenic | 35.0% | |
| TAATTGGATCTTAAGAGCAG+AGG | - | chr3.3:89584530-89584549 | None:intergenic | 35.0% | |
| TACTAATGTTTCCTCATCGT+AGG | + | chr3.3:89588079-89588098 | MS.gene073050:intron | 35.0% | |
| TCCAATTCTTTAGTAGCAAG+AGG | - | chr3.3:89588404-89588423 | None:intergenic | 35.0% | |
| TCTGGTGTAGATATACAGTA+TGG | - | chr3.3:89587947-89587966 | None:intergenic | 35.0% | |
| TGAAGTTTACAAGTCCTCAA+AGG | + | chr3.3:89587360-89587379 | MS.gene073050:CDS | 35.0% | |
| TTCCTAAATCGATGTTACTG+TGG | + | chr3.3:89584710-89584729 | MS.gene073050:intron | 35.0% | |
| ! | CCTGTTTTCAACTGAAGAAA+TGG | + | chr3.3:89587257-89587276 | MS.gene073050:intron | 35.0% |
| ! | TCTCGTCTTTTTGCAAAATG+AGG | + | chr3.3:89585606-89585625 | MS.gene073050:intron | 35.0% |
| ! | TTTCTTGAGGTATTCTCAAC+CGG | + | chr3.3:89587483-89587502 | MS.gene073050:intron | 35.0% |
| ! | TTTTCACTAGACCCTCTTTA+GGG | + | chr3.3:89584994-89585013 | MS.gene073050:intron | 35.0% |
| ! | TTTTCTTGCCAATGTTGTGT+AGG | + | chr3.3:89586158-89586177 | MS.gene073050:intron | 35.0% |
| !! | ATTCTTTTGCCTTGTTCAAG+TGG | - | chr3.3:89587399-89587418 | None:intergenic | 35.0% |
| !! | CACACTGTTGGTAATAATCA+TGG | - | chr3.3:89586373-89586392 | None:intergenic | 35.0% |
| !! | TGATAGCTTGTTGACCATTT+AGG | + | chr3.3:89587159-89587178 | MS.gene073050:intron | 35.0% |
| !! | TTCTTTTGCCTTGTTCAAGT+GGG | - | chr3.3:89587398-89587417 | None:intergenic | 35.0% |
| !!! | CAATTTGTTTGTTTTACCCG+TGG | + | chr3.3:89587133-89587152 | MS.gene073050:intron | 35.0% |
| !!! | GAGTTTTTTCTGCCATTTTC+TGG | + | chr3.3:89588570-89588589 | MS.gene073050:CDS | 35.0% |
| !!! | GTTTTTTTTCTCCTTCATCC+GGG | + | chr3.3:89587764-89587783 | MS.gene073050:intron | 35.0% |
| AAATACAAGAGGATCAGGAG+GGG | - | chr3.3:89587848-89587867 | None:intergenic | 40.0% | |
| AAATCCACCATCTAACCACA+GGG | - | chr3.3:89587103-89587122 | None:intergenic | 40.0% | |
| AAGAAGGTTGTTCTCGCTTA+TGG | + | chr3.3:89587609-89587628 | MS.gene073050:CDS | 40.0% | |
| AATGTTGAAGGCAAAGCTAG+AGG | + | chr3.3:89586239-89586258 | MS.gene073050:CDS | 40.0% | |
| ACAAATACAAGAGGATCAGG+AGG | - | chr3.3:89587850-89587869 | None:intergenic | 40.0% | |
| ACACGCACACAAACAAGAAT+AGG | - | chr3.3:89585484-89585503 | None:intergenic | 40.0% | |
| AGAAAGTGAACTGGGAATCT+CGG | + | chr3.3:89585339-89585358 | MS.gene073050:CDS | 40.0% | |
| AGAAGGTTGTTCTCGCTTAT+GGG | + | chr3.3:89587610-89587629 | MS.gene073050:CDS | 40.0% | |
| AGAGGAATCAGAATCTTCGA+TGG | - | chr3.3:89584512-89584531 | None:intergenic | 40.0% | |
| AGGAAAGTAAAGTCTGAACC+TGG | - | chr3.3:89587668-89587687 | None:intergenic | 40.0% | |
| ATAGCGAAGACGAAAAGCTT+CGG | - | chr3.3:89584442-89584461 | None:intergenic | 40.0% | |
| ATATAGTGTACAGCAAGCCA+AGG | - | chr3.3:89586652-89586671 | None:intergenic | 40.0% | |
| ATTCTAGGCCCTAGAGAAAA+AGG | + | chr3.3:89586971-89586990 | MS.gene073050:intron | 40.0% | |
| CAAATACAAGAGGATCAGGA+GGG | - | chr3.3:89587849-89587868 | None:intergenic | 40.0% | |
| CATTCAATCCTTGCAGAATG+AGG | + | chr3.3:89584947-89584966 | MS.gene073050:CDS | 40.0% | |
| CTATCAGACAAGGTGTATTG+TGG | + | chr3.3:89586561-89586580 | MS.gene073050:intron | 40.0% | |
| GAAGGAGAAAATTAGGGCAA+CGG | - | chr3.3:89584467-89584486 | None:intergenic | 40.0% | |
| GAGAACAACCTTCTTTGTGT+AGG | - | chr3.3:89587604-89587623 | None:intergenic | 40.0% | |
| GAGAGTCATTGGAATGAACA+TGG | + | chr3.3:89586775-89586794 | MS.gene073050:CDS | 40.0% | |
| GAGGATGTAAGTTGTACACT+TGG | + | chr3.3:89585407-89585426 | MS.gene073050:intron | 40.0% | |
| GGTGTAGATATACAGTATGG+AGG | - | chr3.3:89587944-89587963 | None:intergenic | 40.0% | |
| GGTGTTAATGATCAGACTCA+TGG | + | chr3.3:89586613-89586632 | MS.gene073050:intron | 40.0% | |
| TAGCAAGCCATACATTGATC+AGG | + | chr3.3:89587527-89587546 | MS.gene073050:CDS | 40.0% | |
| TATCATCTGCAGCAGCAAAA+AGG | + | chr3.3:89588727-89588746 | MS.gene073050:intron | 40.0% | |
| TCCTCAGAAAAAAGGGTCAT+TGG | + | chr3.3:89585142-89585161 | MS.gene073050:intron | 40.0% | |
| TCTCGCTTATGGGAATTTCT+TGG | + | chr3.3:89587620-89587639 | MS.gene073050:CDS | 40.0% | |
| TGAGATATCACTTCCAACAG+AGG | - | chr3.3:89586805-89586824 | None:intergenic | 40.0% | |
| TTAGATTGAAGCCACACTGT+TGG | - | chr3.3:89586385-89586404 | None:intergenic | 40.0% | |
| TTGAGTAGTGTATTCTCCAC+AGG | + | chr3.3:89586042-89586061 | MS.gene073050:intron | 40.0% | |
| TTGGATTGATACCGAGGAAT+TGG | - | chr3.3:89584573-89584592 | None:intergenic | 40.0% | |
| ! | AAAAGGCACAAGCTGGAAAA+TGG | + | chr3.3:89586988-89587007 | MS.gene073050:CDS | 40.0% |
| ! | AAAGGCACAAGCTGGAAAAT+GGG | + | chr3.3:89586989-89587008 | MS.gene073050:CDS | 40.0% |
| ! | AAGTTGTGGGAGTGTAGTAA+AGG | - | chr3.3:89585807-89585826 | None:intergenic | 40.0% |
| ! | ACGCTTTTCCTATGCATTCT+AGG | + | chr3.3:89586956-89586975 | MS.gene073050:intron | 40.0% |
| ! | AGCTTGTGCCTTTTTCTCTA+GGG | - | chr3.3:89586982-89587001 | None:intergenic | 40.0% |
| ! | CTTTTCACTAGACCCTCTTT+AGG | + | chr3.3:89584993-89585012 | MS.gene073050:intron | 40.0% |
| ! | GAGATTTTGGATTGATACCG+AGG | - | chr3.3:89584579-89584598 | None:intergenic | 40.0% |
| ! | TTTCTTTTCCCCTCTTGTCT+TGG | + | chr3.3:89585678-89585697 | MS.gene073050:intron | 40.0% |
| !! | CACCACAGTAACATCGATTT+AGG | - | chr3.3:89584715-89584734 | None:intergenic | 40.0% |
| !! | GTTTTAATCGTTTCCACGTG+AGG | - | chr3.3:89587020-89587039 | None:intergenic | 40.0% |
| !! | TAAGAGCACGTTCAGTTTTG+CGG | - | chr3.3:89586102-89586121 | None:intergenic | 40.0% |
| !! | TCTTTTGCCTTGTTCAAGTG+GGG | - | chr3.3:89587397-89587416 | None:intergenic | 40.0% |
| !!! | TCCAATGACCCTTTTTTCTG+AGG | - | chr3.3:89585146-89585165 | None:intergenic | 40.0% |
| ACCACCATCCTACACAACAT+TGG | - | chr3.3:89586169-89586188 | None:intergenic | 45.0% | |
| ACTCACAGTCTCACATACCT+CGG | - | chr3.3:89586131-89586150 | None:intergenic | 45.0% | |
| AGAAACCACCAAGACAAGAG+GGG | - | chr3.3:89585689-89585708 | None:intergenic | 45.0% | |
| AGAAGCAACCTCATTCTGCA+AGG | - | chr3.3:89584958-89584977 | None:intergenic | 45.0% | |
| AGATAATAGGCAAGGCCAGA+AGG | - | chr3.3:89588541-89588560 | None:intergenic | 45.0% | |
| ATGATCAGACTCATGGTGCT+TGG | + | chr3.3:89586620-89586639 | MS.gene073050:intron | 45.0% | |
| ATTCCAATGACTCTCAGCCA+CGG | - | chr3.3:89586770-89586789 | None:intergenic | 45.0% | |
| CAAATCCACCATCTAACCAC+AGG | - | chr3.3:89587104-89587123 | None:intergenic | 45.0% | |
| CAGAAACCACCAAGACAAGA+GGG | - | chr3.3:89585690-89585709 | None:intergenic | 45.0% | |
| CCACAGCAATGACCCAAAAT+AGG | - | chr3.3:89585838-89585857 | None:intergenic | 45.0% | |
| CTTGCCAATGTTGTGTAGGA+TGG | + | chr3.3:89586162-89586181 | MS.gene073050:intron | 45.0% | |
| GAAAGTGAACTGGGAATCTC+GGG | + | chr3.3:89585340-89585359 | MS.gene073050:CDS | 45.0% | |
| GAATGAGGTTGCTTCTCTTC+AGG | + | chr3.3:89584962-89584981 | MS.gene073050:CDS | 45.0% | |
| GATAATAGGCAAGGCCAGAA+GGG | - | chr3.3:89588540-89588559 | None:intergenic | 45.0% | |
| GATACCGAGGAATTGGATCT+TGG | - | chr3.3:89584566-89584585 | None:intergenic | 45.0% | |
| GTAGCGACCTGATCAATGTA+TGG | - | chr3.3:89587537-89587556 | None:intergenic | 45.0% | |
| GTGGTCTGTGGTGAAAACAA+AGG | + | chr3.3:89587300-89587319 | MS.gene073050:CDS | 45.0% | |
| TAATGATTCGTGGCCGCTAT+GGG | + | chr3.3:89585895-89585914 | MS.gene073050:intron | 45.0% | |
| TCAACAAGCTATCAGGACCA+CGG | - | chr3.3:89587153-89587172 | None:intergenic | 45.0% | |
| TCATCACTAGCCAAATGTGC+AGG | + | chr3.3:89585870-89585889 | MS.gene073050:intron | 45.0% | |
| TGGTTTCTGCTGAAAGTTGC+TGG | + | chr3.3:89585701-89585720 | MS.gene073050:intron | 45.0% | |
| TGTGAAAGAACAGTGGTCTG+TGG | + | chr3.3:89587288-89587307 | MS.gene073050:CDS | 45.0% | |
| TGTGCAGGTGTAATGATTCG+TGG | + | chr3.3:89585885-89585904 | MS.gene073050:intron | 45.0% | |
| TTAAGTGGTTAGGCCCATAG+CGG | - | chr3.3:89585911-89585930 | None:intergenic | 45.0% | |
| TTCCAGCTGTGAAAGAACAG+TGG | + | chr3.3:89587281-89587300 | MS.gene073050:CDS | 45.0% | |
| TTTCTCCTTCGTTACTTCCG+AGG | + | chr3.3:89584477-89584496 | MS.gene073050:CDS | 45.0% | |
| ! | CAGCTTGTGCCTTTTTCTCT+AGG | - | chr3.3:89586983-89587002 | None:intergenic | 45.0% |
| ! | CTAGAGAAAAAGGCACAAGC+TGG | + | chr3.3:89586981-89587000 | MS.gene073050:CDS | 45.0% |
| ! | TCTGAAGCCCTACACAAAGA+AGG | + | chr3.3:89587593-89587612 | MS.gene073050:CDS | 45.0% |
| ! | TGTGGGAGTGTAGTAAAGGT+GGG | - | chr3.3:89585803-89585822 | None:intergenic | 45.0% |
| ! | TTGTGGGAGTGTAGTAAAGG+TGG | - | chr3.3:89585804-89585823 | None:intergenic | 45.0% |
| !! | AGCTCAACTGGTTTGAGCTA+AGG | - | chr3.3:89587819-89587838 | None:intergenic | 45.0% |
| !! | CCTATTTTGGGTCATTGCTG+TGG | + | chr3.3:89585835-89585854 | MS.gene073050:intron | 45.0% |
| !! | GCTCAACTGGTTTGAGCTAA+GGG | - | chr3.3:89587818-89587837 | None:intergenic | 45.0% |
| !!! | CGTGCTTTTTCAACGTCTCT+TGG | - | chr3.3:89588370-89588389 | None:intergenic | 45.0% |
| !! | ATAAAAAAAAAAAAAAAACT+TGG | - | chr3.3:89584680-89584699 | None:intergenic | 5.0% |
| !! | TTATTACTAAAATATAAATA+TGG | + | chr3.3:89588467-89588486 | MS.gene073050:intron | 5.0% |
| !!! | ATATTTTAGTAATAATATTT+AGG | - | chr3.3:89588462-89588481 | None:intergenic | 5.0% |
| AAAAGGGTCATTGGATGCCG+AGG | + | chr3.3:89585151-89585170 | MS.gene073050:CDS | 50.0% | |
| AAATGAGGACGATGCCTGGA+AGG | + | chr3.3:89585621-89585640 | MS.gene073050:intron | 50.0% | |
| AACCTGGCGATGATATGCAG+TGG | - | chr3.3:89587652-89587671 | None:intergenic | 50.0% | |
| AATGAGGACGATGCCTGGAA+GGG | + | chr3.3:89585622-89585641 | MS.gene073050:intron | 50.0% | |
| ACGTCTCTTGGACAGTAGCT+TGG | - | chr3.3:89588358-89588377 | None:intergenic | 50.0% | |
| ACTCGTCGTAAAGCTAAGCG+AGG | + | chr3.3:89588785-89588804 | MS.gene073050:CDS | 50.0% | |
| ACTGCAATTACTGTGCCCTG+TGG | + | chr3.3:89587085-89587104 | MS.gene073050:intron | 50.0% | |
| ACTTGCTCCCCACTTGAACA+AGG | + | chr3.3:89587387-89587406 | MS.gene073050:CDS | 50.0% | |
| AGCTTTACGACGAGTGTGGT+GGG | - | chr3.3:89588780-89588799 | None:intergenic | 50.0% | |
| CAAAGCAAAAGAGCTGAGCG+AGG | + | chr3.3:89586269-89586288 | MS.gene073050:CDS | 50.0% | |
| CAACAAGCTATCAGGACCAC+GGG | - | chr3.3:89587152-89587171 | None:intergenic | 50.0% | |
| CAGTGCTTGCACATGAGGTT+CGG | - | chr3.3:89587326-89587345 | None:intergenic | 50.0% | |
| CATTGATCAGGTCGCTACTG+CGG | + | chr3.3:89587539-89587558 | MS.gene073050:CDS | 50.0% | |
| CTTTCGAGCTTCCTGTCAAC+CGG | - | chr3.3:89587505-89587524 | None:intergenic | 50.0% | |
| GAAGTCAGTGCTTGCACATG+AGG | - | chr3.3:89587331-89587350 | None:intergenic | 50.0% | |
| GACCACTGTTCTTTCACAGC+TGG | - | chr3.3:89587286-89587305 | None:intergenic | 50.0% | |
| GACCTGCTTCTGTAGTTCAC+CGG | - | chr3.3:89585204-89585223 | None:intergenic | 50.0% | |
| GCAGAAACCACCAAGACAAG+AGG | - | chr3.3:89585691-89585710 | None:intergenic | 50.0% | |
| GCCAATGTTGTGTAGGATGG+TGG | + | chr3.3:89586165-89586184 | MS.gene073050:intron | 50.0% | |
| GGTATTCTCAACCGGTTGAC+AGG | + | chr3.3:89587491-89587510 | MS.gene073050:intron | 50.0% | |
| GTAATGATTCGTGGCCGCTA+TGG | + | chr3.3:89585894-89585913 | MS.gene073050:intron | 50.0% | |
| TACTGTGCCCTGTGGTTAGA+TGG | + | chr3.3:89587093-89587112 | MS.gene073050:intron | 50.0% | |
| TAGTGTACAGCAAGCCAAGG+AGG | - | chr3.3:89586649-89586668 | None:intergenic | 50.0% | |
| TGAACATGGGAAGCCTCTGT+TGG | + | chr3.3:89586789-89586808 | MS.gene073050:CDS | 50.0% | |
| TGAGCTAAGGGATGAGGAGT+TGG | - | chr3.3:89587806-89587825 | None:intergenic | 50.0% | |
| TGCAAAATGAGGACGATGCC+TGG | + | chr3.3:89585617-89585636 | MS.gene073050:intron | 50.0% | |
| TGCTGCTGCTGTTGTTAGCA+AGG | + | chr3.3:89587882-89587901 | MS.gene073050:intron | 50.0% | |
| TTCGATGGAAACATCGGCCT+CGG | - | chr3.3:89584497-89584516 | None:intergenic | 50.0% | |
| ! | CTCGCTCAGCTCTTTTGCTT+TGG | - | chr3.3:89586271-89586290 | None:intergenic | 50.0% |
| ! | CTGGTTTGAGCTAAGGGATG+AGG | - | chr3.3:89587812-89587831 | None:intergenic | 50.0% |
| ! | CTTTTCCCCTCTTGTCTTGG+TGG | + | chr3.3:89585681-89585700 | MS.gene073050:intron | 50.0% |
| ! | TAGCTTTACGACGAGTGTGG+TGG | - | chr3.3:89588781-89588800 | None:intergenic | 50.0% |
| !! | AAAATGGGCTGAACCTCACG+TGG | + | chr3.3:89587004-89587023 | MS.gene073050:CDS | 50.0% |
| !! | CTCTAGGGCCTAGAATGCAT+AGG | - | chr3.3:89586967-89586986 | None:intergenic | 50.0% |
| !! | GCTTAGCTTTACGACGAGTG+TGG | - | chr3.3:89588784-89588803 | None:intergenic | 50.0% |
| AATGAGGACGATGCCCTTCC+AGG | - | chr3.3:89585638-89585657 | None:intergenic | 55.0% | |
| ACAAGAGGATCAGGAGGGGT+TGG | - | chr3.3:89587844-89587863 | None:intergenic | 55.0% | |
| ACACACAGCTCCCTACGATG+AGG | - | chr3.3:89588093-89588112 | None:intergenic | 55.0% | |
| ACGTGCTCTTAAAGTCGCCG+AGG | + | chr3.3:89586111-89586130 | MS.gene073050:CDS | 55.0% | |
| AGCCACTGCATATCATCGCC+AGG | + | chr3.3:89587647-89587666 | MS.gene073050:CDS | 55.0% | |
| AGCCTTTCCAACCTGCTCCT+CGG | - | chr3.3:89585171-89585190 | None:intergenic | 55.0% | |
| AGTCCGTGGCTGAGAGTCAT+TGG | + | chr3.3:89586764-89586783 | MS.gene073050:intron | 55.0% | |
| ATCGGCCTCGGAAGTAACGA+AGG | - | chr3.3:89584485-89584504 | None:intergenic | 55.0% | |
| ATGGTGCTTGGCTTCCTCCT+TGG | + | chr3.3:89586632-89586651 | MS.gene073050:CDS | 55.0% | |
| CAAGAGGATCAGGAGGGGTT+GGG | - | chr3.3:89587843-89587862 | None:intergenic | 55.0% | |
| CTTCATCCGGGTTTCAACCC+AGG | + | chr3.3:89587776-89587795 | MS.gene073050:intron | 55.0% | |
| GATGAGGAGTTGGAGGTCCT+GGG | - | chr3.3:89587796-89587815 | None:intergenic | 55.0% | |
| GCAAGTAAACCCGCTCGAAG+TGG | + | chr3.3:89588749-89588768 | MS.gene073050:CDS | 55.0% | |
| GCGAAGACGAAAAGCTTCGG+AGG | - | chr3.3:89584439-89584458 | None:intergenic | 55.0% | |
| GCTAAGGGATGAGGAGTTGG+AGG | - | chr3.3:89587803-89587822 | None:intergenic | 55.0% | |
| GTGGGTGTTTCCACTTCGAG+CGG | - | chr3.3:89588762-89588781 | None:intergenic | 55.0% | |
| TGCCGGTGAACTACAGAAGC+AGG | + | chr3.3:89585199-89585218 | MS.gene073050:CDS | 55.0% | |
| TGGGTGTTTCCACTTCGAGC+GGG | - | chr3.3:89588761-89588780 | None:intergenic | 55.0% | |
| TGTGCCCTGTGGTTAGATGG+TGG | + | chr3.3:89587096-89587115 | MS.gene073050:intron | 55.0% | |
| ! | CTGGGTTGAAACCCGGATGA+AGG | - | chr3.3:89587778-89587797 | None:intergenic | 55.0% |
| GAGGGGTTGGGTAGCTCAAC+TGG | - | chr3.3:89587831-89587850 | None:intergenic | 60.0% | |
| GGAAAGGCTCATGCACGTGC+CGG | + | chr3.3:89585182-89585201 | MS.gene073050:CDS | 60.0% | |
| GGATGAGGAGTTGGAGGTCC+TGG | - | chr3.3:89587797-89587816 | None:intergenic | 60.0% | |
| GGGAGCAAGTGCGTCCTTTG+AGG | - | chr3.3:89587377-89587396 | None:intergenic | 60.0% | |
| GTCATTGGATGCCGAGGAGC+AGG | + | chr3.3:89585157-89585176 | MS.gene073050:CDS | 60.0% | |
| TATGCAGGCCTCTGCCCTTC+TGG | + | chr3.3:89588523-89588542 | MS.gene073050:intron | 60.0% | |
| TTGGATGCCGAGGAGCAGGT+TGG | + | chr3.3:89585161-89585180 | MS.gene073050:CDS | 60.0% | |
| ! | GGAGGTCCTGGGTTGAAACC+CGG | - | chr3.3:89587785-89587804 | None:intergenic | 60.0% |
| ! | TGCCGAGGAGCAGGTTGGAA+AGG | + | chr3.3:89585166-89585185 | MS.gene073050:CDS | 60.0% |
| AGGCAAGGCCAGAAGGGCAG+AGG | - | chr3.3:89588534-89588553 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 89584430 | 89588823 | 89584430 | ID=MS.gene073050 |
| chr3.3 | mRNA | 89584430 | 89588823 | 89584430 | ID=MS.gene073050.t1;Parent=MS.gene073050 |
| chr3.3 | exon | 89584430 | 89584580 | 89584430 | ID=MS.gene073050.t1.exon1;Parent=MS.gene073050.t1 |
| chr3.3 | CDS | 89584430 | 89584580 | 89584430 | ID=cds.MS.gene073050.t1;Parent=MS.gene073050.t1 |
| chr3.3 | exon | 89584856 | 89584983 | 89584856 | ID=MS.gene073050.t1.exon2;Parent=MS.gene073050.t1 |
| chr3.3 | CDS | 89584856 | 89584983 | 89584856 | ID=cds.MS.gene073050.t1;Parent=MS.gene073050.t1 |
| chr3.3 | exon | 89585149 | 89585220 | 89585149 | ID=MS.gene073050.t1.exon3;Parent=MS.gene073050.t1 |
| chr3.3 | CDS | 89585149 | 89585220 | 89585149 | ID=cds.MS.gene073050.t1;Parent=MS.gene073050.t1 |
| chr3.3 | exon | 89585299 | 89585412 | 89585299 | ID=MS.gene073050.t1.exon4;Parent=MS.gene073050.t1 |
| chr3.3 | CDS | 89585299 | 89585412 | 89585299 | ID=cds.MS.gene073050.t1;Parent=MS.gene073050.t1 |
| chr3.3 | exon | 89586064 | 89586132 | 89586064 | ID=MS.gene073050.t1.exon5;Parent=MS.gene073050.t1 |
| chr3.3 | CDS | 89586064 | 89586132 | 89586064 | ID=cds.MS.gene073050.t1;Parent=MS.gene073050.t1 |
| chr3.3 | exon | 89586234 | 89586290 | 89586234 | ID=MS.gene073050.t1.exon6;Parent=MS.gene073050.t1 |
| chr3.3 | CDS | 89586234 | 89586290 | 89586234 | ID=cds.MS.gene073050.t1;Parent=MS.gene073050.t1 |
| chr3.3 | exon | 89586628 | 89586681 | 89586628 | ID=MS.gene073050.t1.exon7;Parent=MS.gene073050.t1 |
| chr3.3 | CDS | 89586628 | 89586681 | 89586628 | ID=cds.MS.gene073050.t1;Parent=MS.gene073050.t1 |
| chr3.3 | exon | 89586766 | 89586828 | 89586766 | ID=MS.gene073050.t1.exon8;Parent=MS.gene073050.t1 |
| chr3.3 | CDS | 89586766 | 89586828 | 89586766 | ID=cds.MS.gene073050.t1;Parent=MS.gene073050.t1 |
| chr3.3 | exon | 89586978 | 89587040 | 89586978 | ID=MS.gene073050.t1.exon9;Parent=MS.gene073050.t1 |
| chr3.3 | CDS | 89586978 | 89587040 | 89586978 | ID=cds.MS.gene073050.t1;Parent=MS.gene073050.t1 |
| chr3.3 | exon | 89587274 | 89587438 | 89587274 | ID=MS.gene073050.t1.exon10;Parent=MS.gene073050.t1 |
| chr3.3 | CDS | 89587274 | 89587438 | 89587274 | ID=cds.MS.gene073050.t1;Parent=MS.gene073050.t1 |
| chr3.3 | exon | 89587513 | 89587668 | 89587513 | ID=MS.gene073050.t1.exon11;Parent=MS.gene073050.t1 |
| chr3.3 | CDS | 89587513 | 89587668 | 89587513 | ID=cds.MS.gene073050.t1;Parent=MS.gene073050.t1 |
| chr3.3 | exon | 89588353 | 89588433 | 89588353 | ID=MS.gene073050.t1.exon12;Parent=MS.gene073050.t1 |
| chr3.3 | CDS | 89588353 | 89588433 | 89588353 | ID=cds.MS.gene073050.t1;Parent=MS.gene073050.t1 |
| chr3.3 | exon | 89588530 | 89588591 | 89588530 | ID=MS.gene073050.t1.exon13;Parent=MS.gene073050.t1 |
| chr3.3 | CDS | 89588530 | 89588591 | 89588530 | ID=cds.MS.gene073050.t1;Parent=MS.gene073050.t1 |
| chr3.3 | exon | 89588739 | 89588823 | 89588739 | ID=MS.gene073050.t1.exon14;Parent=MS.gene073050.t1 |
| chr3.3 | CDS | 89588739 | 89588823 | 89588739 | ID=cds.MS.gene073050.t1;Parent=MS.gene073050.t1 |
| Gene Sequence |
| Protein sequence |
