Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073773.t1 | XP_020220731.1 | 84.6 | 727 | 99 | 2 | 1 | 715 | 1 | 726 | 0.00E+00 | 1096.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073773.t1 | Q9M1H3 | 76.2 | 724 | 162 | 4 | 1 | 715 | 1 | 723 | 3.0e-285 | 982.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073773.t1 | A0A1S2XNE6 | 85.6 | 716 | 101 | 2 | 1 | 715 | 1 | 715 | 0.0e+00 | 1090.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene073773 | MS.gene40858 | PPI |
| MS.gene073773 | MS.gene98065 | PPI |
| MS.gene054719 | MS.gene073773 | PPI |
| MS.gene69745 | MS.gene073773 | PPI |
| MS.gene31234 | MS.gene073773 | PPI |
| MS.gene073773 | MS.gene044268 | PPI |
| MS.gene70530 | MS.gene073773 | PPI |
| MS.gene073773 | MS.gene050086 | PPI |
| MS.gene028666 | MS.gene073773 | PPI |
| MS.gene25771 | MS.gene073773 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073773.t1 | MTR_8g075040 | 90.769 | 715 | 64 | 2 | 1 | 715 | 54 | 766 | 0.0 | 1238 |
| MS.gene073773.t1 | MTR_7g018380 | 90.642 | 716 | 65 | 2 | 1 | 715 | 1 | 715 | 0.0 | 1233 |
| MS.gene073773.t1 | MTR_1g066620 | 93.036 | 560 | 38 | 1 | 157 | 715 | 2 | 561 | 0.0 | 1061 |
| MS.gene073773.t1 | MTR_3g080970 | 43.286 | 566 | 292 | 10 | 147 | 705 | 167 | 710 | 3.23e-152 | 459 |
| MS.gene073773.t1 | MTR_2g095440 | 41.516 | 554 | 290 | 8 | 153 | 705 | 62 | 582 | 3.98e-143 | 431 |
| MS.gene073773.t1 | MTR_2g095440 | 41.304 | 552 | 290 | 8 | 155 | 705 | 4 | 522 | 2.32e-142 | 427 |
| MS.gene073773.t1 | MTR_2g095440 | 41.499 | 547 | 286 | 8 | 157 | 702 | 12 | 525 | 5.93e-142 | 426 |
| MS.gene073773.t1 | MTR_4g057795 | 41.166 | 566 | 275 | 9 | 153 | 705 | 62 | 582 | 8.92e-141 | 425 |
| MS.gene073773.t1 | MTR_4g057795 | 40.891 | 516 | 247 | 9 | 203 | 705 | 2 | 472 | 2.21e-124 | 379 |
| MS.gene073773.t1 | MTR_3g095010 | 29.561 | 592 | 365 | 14 | 145 | 715 | 96 | 656 | 1.58e-62 | 222 |
| MS.gene073773.t1 | MTR_3g095010 | 27.393 | 303 | 170 | 6 | 155 | 457 | 433 | 685 | 1.02e-21 | 100 |
| MS.gene073773.t1 | MTR_6g011680 | 32.314 | 229 | 116 | 11 | 488 | 691 | 1008 | 1222 | 6.82e-13 | 72.8 |
| MS.gene073773.t1 | MTR_8g022270 | 28.696 | 230 | 123 | 8 | 488 | 691 | 598 | 812 | 7.86e-13 | 72.8 |
| MS.gene073773.t1 | MTR_7g102070 | 28.390 | 236 | 128 | 8 | 482 | 691 | 420 | 640 | 1.16e-12 | 72.4 |
| MS.gene073773.t1 | MTR_1g063170 | 29.858 | 211 | 113 | 7 | 482 | 666 | 393 | 594 | 1.33e-12 | 72.0 |
| MS.gene073773.t1 | MTR_4g124050 | 28.814 | 236 | 106 | 9 | 493 | 691 | 1055 | 1265 | 2.90e-12 | 70.9 |
| MS.gene073773.t1 | MTR_3g107800 | 29.661 | 236 | 104 | 9 | 493 | 691 | 1031 | 1241 | 3.76e-12 | 70.5 |
| MS.gene073773.t1 | MTR_5g029750 | 27.193 | 228 | 129 | 9 | 488 | 691 | 989 | 1203 | 1.51e-11 | 68.6 |
| MS.gene073773.t1 | MTR_7g079540 | 36.025 | 161 | 79 | 6 | 505 | 643 | 101 | 259 | 5.81e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene073773.t1 | AT3G54540 | 76.204 | 727 | 157 | 5 | 1 | 715 | 1 | 723 | 0.0 | 1101 |
| MS.gene073773.t1 | AT3G54540 | 76.204 | 727 | 157 | 5 | 1 | 715 | 1 | 723 | 0.0 | 1101 |
| MS.gene073773.t1 | AT1G64550 | 43.937 | 569 | 289 | 11 | 145 | 705 | 165 | 711 | 1.68e-150 | 455 |
| MS.gene073773.t1 | AT5G60790 | 41.441 | 555 | 289 | 9 | 153 | 705 | 67 | 587 | 3.22e-139 | 422 |
| MS.gene073773.t1 | AT5G64840 | 28.571 | 567 | 371 | 9 | 146 | 703 | 89 | 630 | 2.19e-63 | 224 |
| MS.gene073773.t1 | AT5G09930 | 29.072 | 571 | 365 | 12 | 145 | 703 | 74 | 616 | 3.93e-60 | 215 |
| MS.gene073773.t1 | AT5G09930 | 27.244 | 312 | 152 | 6 | 155 | 454 | 411 | 659 | 7.14e-20 | 94.7 |
| MS.gene073773.t1 | AT3G28390 | 29.956 | 227 | 116 | 9 | 493 | 691 | 985 | 1196 | 3.57e-12 | 70.5 |
| MS.gene073773.t1 | AT2G36910 | 29.612 | 206 | 110 | 7 | 487 | 666 | 367 | 563 | 4.12e-12 | 70.5 |
| MS.gene073773.t1 | AT1G67940 | 31.754 | 211 | 102 | 9 | 166 | 367 | 41 | 218 | 7.20e-12 | 67.0 |
| MS.gene073773.t1 | AT3G28345 | 29.808 | 208 | 121 | 7 | 481 | 666 | 988 | 1192 | 7.93e-12 | 69.7 |
| MS.gene073773.t1 | AT3G28860 | 31.818 | 220 | 119 | 9 | 493 | 691 | 1015 | 1224 | 8.37e-12 | 69.3 |
| MS.gene073773.t1 | AT2G47000 | 29.344 | 259 | 117 | 10 | 488 | 710 | 1042 | 1270 | 1.03e-11 | 69.3 |
| MS.gene073773.t1 | AT2G47000 | 29.344 | 259 | 117 | 10 | 488 | 710 | 1042 | 1270 | 1.03e-11 | 69.3 |
| MS.gene073773.t1 | AT2G47000 | 29.344 | 259 | 117 | 10 | 488 | 710 | 1042 | 1270 | 1.03e-11 | 69.3 |
| MS.gene073773.t1 | AT3G62150 | 27.917 | 240 | 113 | 9 | 488 | 691 | 1052 | 1267 | 4.17e-11 | 67.4 |
| MS.gene073773.t1 | AT3G62150 | 27.917 | 240 | 113 | 9 | 488 | 691 | 1052 | 1267 | 4.17e-11 | 67.4 |
| MS.gene073773.t1 | AT3G62150 | 27.917 | 240 | 113 | 9 | 488 | 691 | 1052 | 1267 | 4.17e-11 | 67.4 |
| MS.gene073773.t1 | AT1G65410 | 30.734 | 218 | 111 | 8 | 151 | 355 | 79 | 269 | 4.28e-11 | 65.5 |
| MS.gene073773.t1 | AT1G70610 | 32.184 | 174 | 102 | 4 | 488 | 646 | 455 | 627 | 4.70e-11 | 66.6 |
| MS.gene073773.t1 | AT1G70610 | 32.184 | 174 | 102 | 4 | 488 | 646 | 274 | 446 | 6.02e-11 | 65.9 |
Find 165 sgRNAs with CRISPR-Local
Find 189 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGTGCAAAACTTGGTAAATT+TGG | 0.116784 | 1.1:-49081072 | MS.gene073773:CDS |
| CTCTGCCATGTTAGCAAGTA+TGG | 0.253861 | 1.1:-49082756 | MS.gene073773:CDS |
| AGCTGCCCATTTGGCTGAAC+AGG | 0.276829 | 1.1:-49082513 | MS.gene073773:CDS |
| ATGAAGAACGGAGTCAAATA+TGG | 0.280825 | 1.1:-49080816 | MS.gene073773:CDS |
| AGAAATTGAAAGCAGCTAAA+AGG | 0.323101 | 1.1:-49081596 | MS.gene073773:CDS |
| TCTTTGCCTGTTCAGCCAAA+TGG | 0.324070 | 1.1:+49082507 | None:intergenic |
| TGTTGATGTTGGCATTGATA+TGG | 0.325155 | 1.1:-49081325 | MS.gene073773:CDS |
| GTCTGAAATCCTCCCGGTTT+GGG | 0.332518 | 1.1:+49081355 | None:intergenic |
| TAAGAATATTGACGTCCTTC+TGG | 0.334816 | 1.1:-49082222 | MS.gene073773:CDS |
| GTGCAAAACTTGGTAAATTT+GGG | 0.337873 | 1.1:-49081071 | MS.gene073773:CDS |
| ATATCTTCTAGCTGGTGATT+TGG | 0.356211 | 1.1:-49081250 | MS.gene073773:CDS |
| TTGTAATCCTCAAATGTTCC+AGG | 0.358592 | 1.1:+49080763 | None:intergenic |
| ACTTGTGTGGTACCTCTACT+TGG | 0.360096 | 1.1:+49081466 | None:intergenic |
| ACTCCCATTGTCAAACTATC+AGG | 0.364911 | 1.1:-49081027 | MS.gene073773:CDS |
| ACCCACAAATCATCTGGATA+TGG | 0.365374 | 1.1:-49080935 | MS.gene073773:CDS |
| GTTGCCATTGTTGGGCCTAA+TGG | 0.366354 | 1.1:-49081294 | MS.gene073773:CDS |
| CTTTGCCTGTTCAGCCAAAT+GGG | 0.383181 | 1.1:+49082508 | None:intergenic |
| AGAAGGACGTCAATATTCTT+AGG | 0.383693 | 1.1:+49082224 | None:intergenic |
| GGGACTCGTGTTGCCATTGT+TGG | 0.395294 | 1.1:-49081303 | MS.gene073773:CDS |
| TTGACTTTCCCATTCCATTC+GGG | 0.395555 | 1.1:+49082285 | None:intergenic |
| GTTGACTTTCCCATTCCATT+CGG | 0.398483 | 1.1:+49082284 | None:intergenic |
| TTGACCTGAGGGCTGTTCTC+TGG | 0.403120 | 1.1:-49081818 | MS.gene073773:CDS |
| AGTCGGGCTTTGGTTCTTGA+TGG | 0.407371 | 1.1:-49082437 | MS.gene073773:CDS |
| TGTCATCCCAAGTCGGGCTT+TGG | 0.407674 | 1.1:-49082447 | MS.gene073773:CDS |
| TCCATATCCAGATGATTTGT+GGG | 0.411181 | 1.1:+49080934 | None:intergenic |
| GATCTACAAAATGCAGCTTC+AGG | 0.411979 | 1.1:-49082107 | MS.gene073773:CDS |
| TTACTAAGTCCCTCCTGGTC+TGG | 0.421538 | 1.1:+49081108 | None:intergenic |
| TGAGCTTTAGCTACCCAAAC+CGG | 0.421726 | 1.1:-49081368 | MS.gene073773:CDS |
| CATGGTTTAGCCTTTGTAGA+TGG | 0.422109 | 1.1:+49082815 | None:intergenic |
| CTTCGAAGTTCACCTTCACT+TGG | 0.427699 | 1.1:+49081225 | None:intergenic |
| ATTTCAAACTTCATTTCTAT+CGG | 0.428855 | 1.1:-49081695 | MS.gene073773:CDS |
| AGTCTGAAATCCTCCCGGTT+TGG | 0.430408 | 1.1:+49081354 | None:intergenic |
| TTCCATATCCAGATGATTTG+TGG | 0.432684 | 1.1:+49080933 | None:intergenic |
| TTTCAAACTTCATTTCTATC+GGG | 0.433047 | 1.1:-49081694 | MS.gene073773:CDS |
| GAGATATTCCCAACACTTTG+TGG | 0.436079 | 1.1:-49081181 | MS.gene073773:CDS |
| AGCATCGAAAAGCAAAAGTA+AGG | 0.436628 | 1.1:-49081511 | MS.gene073773:CDS |
| GAAGTCAGAAATTGAGGATA+GGG | 0.438140 | 1.1:-49081203 | MS.gene073773:CDS |
| TCATGGAAAACGGTATGGTT+TGG | 0.441052 | 1.1:-49082312 | MS.gene073773:CDS |
| TAATGTTGTCATCCCAAGTC+GGG | 0.442342 | 1.1:-49082453 | MS.gene073773:CDS |
| GCAAAGAAAGAAGCTCTTAG+AGG | 0.450601 | 1.1:-49082491 | MS.gene073773:CDS |
| TCCCTCTGATGATGATGAAT+CGG | 0.452332 | 1.1:-49082633 | MS.gene073773:CDS |
| GTGTTTCATCCATTGTTAGT+AGG | 0.453766 | 1.1:+49081157 | None:intergenic |
| TATGCAGAAGCTTTCGGAGC+AGG | 0.454924 | 1.1:+49082677 | None:intergenic |
| CAGCAGCATCAGACCCCATC+AGG | 0.463191 | 1.1:+49082003 | None:intergenic |
| AGATGAACCCACAAATCATC+TGG | 0.463680 | 1.1:-49080941 | MS.gene073773:CDS |
| GTTGATGTTGGCATTGATAT+GGG | 0.466393 | 1.1:-49081324 | MS.gene073773:CDS |
| GGTGTGAGCTCTGTAGGTTC+AGG | 0.469356 | 1.1:+49081414 | None:intergenic |
| CTGGTTGAGCAGGAGGTAGT+TGG | 0.476330 | 1.1:-49082203 | MS.gene073773:CDS |
| TAGTAGGTCCACAAAGTGTT+GGG | 0.476791 | 1.1:+49081173 | None:intergenic |
| TGACGTCCTTCTGGTTGAGC+AGG | 0.476988 | 1.1:-49082213 | MS.gene073773:CDS |
| GTCCTACAAAATCCTTTAGT+GGG | 0.477264 | 1.1:-49081923 | MS.gene073773:CDS |
| AAATTTCCCTGGAACATTTG+AGG | 0.478395 | 1.1:-49080770 | MS.gene073773:CDS |
| TATCAGGAGGGCAGAAAGCT+CGG | 0.480167 | 1.1:-49081011 | MS.gene073773:CDS |
| TTGGTTGGCCCGAATGGAAT+GGG | 0.482720 | 1.1:-49082293 | MS.gene073773:CDS |
| GCGGGTGGGAACAACGTTGT+AGG | 0.488336 | 1.1:-49081650 | MS.gene073773:CDS |
| CTTGCTTACTAAGTCCCTCC+TGG | 0.488701 | 1.1:+49081103 | None:intergenic |
| ATTGATTTCACGTGTGTGTA+AGG | 0.490491 | 1.1:-49080839 | MS.gene073773:CDS |
| GAGGCTGTCCGTGCAAAACT+TGG | 0.491172 | 1.1:-49081081 | MS.gene073773:CDS |
| CAAATATGGGTTGTTGAAGA+TGG | 0.492000 | 1.1:-49080802 | MS.gene073773:CDS |
| ATCAGGAGGGCAGAAAGCTC+GGG | 0.492201 | 1.1:-49081010 | MS.gene073773:CDS |
| TGTCCTACAAAATCCTTTAG+TGG | 0.493667 | 1.1:-49081924 | MS.gene073773:CDS |
| CCTCAGGTCAAGATGATTAG+TGG | 0.497140 | 1.1:+49081830 | None:intergenic |
| AGATGATACTAATGAGGAAG+AGG | 0.497593 | 1.1:-49082066 | MS.gene073773:CDS |
| TTCGAAGAAGTCAGAAATTG+AGG | 0.499370 | 1.1:-49081209 | MS.gene073773:CDS |
| GGACTCGTGTTGCCATTGTT+GGG | 0.501610 | 1.1:-49081302 | MS.gene073773:CDS |
| ACGTCAATATTCTTAGGTAC+TGG | 0.501876 | 1.1:+49082230 | None:intergenic |
| TATGGTTTGGTTGGCCCGAA+TGG | 0.501890 | 1.1:-49082299 | MS.gene073773:CDS |
| AGACTCTCAGATGTTGATGT+TGG | 0.502794 | 1.1:-49081336 | MS.gene073773:CDS |
| AGAAGTCAGAAATTGAGGAT+AGG | 0.504671 | 1.1:-49081204 | MS.gene073773:CDS |
| TAGTAAAGATGTTTCTAAGA+AGG | 0.504745 | 1.1:-49082792 | MS.gene073773:CDS |
| TCAAGAACCAAAGCCCGACT+TGG | 0.505660 | 1.1:+49082440 | None:intergenic |
| TTAGTAGGTCCACAAAGTGT+TGG | 0.510313 | 1.1:+49081172 | None:intergenic |
| TAGAAGAGTACTTGTGTCGC+TGG | 0.512213 | 1.1:-49081794 | MS.gene073773:CDS |
| AGGAGCATGAGCAAAGACAT+AGG | 0.514702 | 1.1:-49082607 | MS.gene073773:CDS |
| GTTTGACAATGGGAGTAAGA+TGG | 0.515153 | 1.1:+49081034 | None:intergenic |
| TGAAGATATCTCATGGAAAA+CGG | 0.518295 | 1.1:-49082322 | MS.gene073773:CDS |
| AGTGGCGGTGTGAGCTCTGT+AGG | 0.518413 | 1.1:+49081408 | None:intergenic |
| TCAGTGTATGCAGAAGCTTT+CGG | 0.518649 | 1.1:+49082671 | None:intergenic |
| TTGAAAGCAGCTAAAAGGAC+TGG | 0.519209 | 1.1:-49081591 | MS.gene073773:CDS |
| AGACGAAGAAGGTACTGAAC+AGG | 0.519926 | 1.1:+49081135 | None:intergenic |
| AATGCAGCTTCAGGTGAAGA+AGG | 0.521065 | 1.1:-49082098 | MS.gene073773:CDS |
| CGGGTGGGAACAACGTTGTA+GGG | 0.523970 | 1.1:-49081649 | MS.gene073773:CDS |
| CGTCCTTCTGGTTGAGCAGG+AGG | 0.524087 | 1.1:-49082210 | MS.gene073773:CDS |
| TCTTCGTCTGCATCCAGACC+AGG | 0.526284 | 1.1:-49081121 | MS.gene073773:CDS |
| ACTAATGAGGAAGAGGATGT+AGG | 0.528791 | 1.1:-49082059 | MS.gene073773:CDS |
| GCTCTGTAGGTTCAGGAAAG+TGG | 0.529343 | 1.1:+49081421 | None:intergenic |
| ATTGTTGGGCCTAATGGTGC+TGG | 0.529640 | 1.1:-49081288 | MS.gene073773:CDS |
| GGAAAACGGTATGGTTTGGT+TGG | 0.532511 | 1.1:-49082308 | MS.gene073773:CDS |
| TGGAACATTTGAGGATTACA+AGG | 0.541220 | 1.1:-49080761 | MS.gene073773:CDS |
| TTTGGTTGGCCCGAATGGAA+TGG | 0.541464 | 1.1:-49082294 | MS.gene073773:CDS |
| TTCAACATTAGCTGAAACAA+CGG | 0.543598 | 1.1:+49082157 | None:intergenic |
| GTATGAACAATTACACCTGA+TGG | 0.543906 | 1.1:-49082018 | MS.gene073773:CDS |
| CCCTCCTGATAGTTTGACAA+TGG | 0.544696 | 1.1:+49081023 | None:intergenic |
| TTCAAACTTCATTTCTATCG+GGG | 0.545830 | 1.1:-49081693 | MS.gene073773:CDS |
| AGCTAAAAGGACTGGAGACA+AGG | 0.547150 | 1.1:-49081583 | MS.gene073773:CDS |
| TATGAACAATTACACCTGAT+GGG | 0.547968 | 1.1:-49082017 | MS.gene073773:CDS |
| CCTCCTGATAGTTTGACAAT+GGG | 0.549798 | 1.1:+49081024 | None:intergenic |
| TGAAGAACGGAGTCAAATAT+GGG | 0.553289 | 1.1:-49080815 | MS.gene073773:CDS |
| GGGAAAGTTTGATGAGGATG+AGG | 0.553303 | 1.1:-49081490 | MS.gene073773:CDS |
| GCATCAGTGAAGATATCTCA+TGG | 0.554022 | 1.1:-49082329 | MS.gene073773:CDS |
| GGAGCATGAGCAAAGACATA+GGG | 0.554124 | 1.1:-49082606 | MS.gene073773:CDS |
| TTAGAAACATCTTTACTACA+TGG | 0.554327 | 1.1:+49082797 | None:intergenic |
| ATATCTCATGGAAAACGGTA+TGG | 0.560689 | 1.1:-49082317 | MS.gene073773:CDS |
| TGATGATGATGAATCGGAAG+AGG | 0.561420 | 1.1:-49082627 | MS.gene073773:CDS |
| CATCTGGATATGGAAAGTAT+TGG | 0.561515 | 1.1:-49080925 | MS.gene073773:CDS |
| ACACTTCTATATCTTCTAGC+TGG | 0.562450 | 1.1:-49081258 | MS.gene073773:CDS |
| CAAGAACCAAAGCCCGACTT+GGG | 0.562585 | 1.1:+49082441 | None:intergenic |
| CACTAATCATCTTGACCTGA+GGG | 0.565689 | 1.1:-49081829 | MS.gene073773:CDS |
| CTTTGTGGACCTACTAACAA+TGG | 0.566897 | 1.1:-49081166 | MS.gene073773:CDS |
| AGACAAGGCTCAACAAGATA+AGG | 0.569772 | 1.1:-49081568 | MS.gene073773:CDS |
| TTAATGTTGTCATCCCAAGT+CGG | 0.570270 | 1.1:-49082454 | MS.gene073773:CDS |
| GATGCACTGCATAAATTCAC+CGG | 0.574833 | 1.1:-49080892 | MS.gene073773:CDS |
| CTGAGAGTCTGAAATCCTCC+CGG | 0.576382 | 1.1:+49081349 | None:intergenic |
| GTGTCGCTGGAAGAAAACTT+TGG | 0.577100 | 1.1:-49081781 | MS.gene073773:CDS |
| TATGGAAAGTATTGGTGCAT+TGG | 0.577172 | 1.1:-49080917 | MS.gene073773:CDS |
| TCTCAGAGCATACTGTATTG+AGG | 0.578071 | 1.1:+49081733 | None:intergenic |
| GCATCGAAAAGCAAAAGTAA+GGG | 0.580770 | 1.1:-49081510 | MS.gene073773:CDS |
| TTCATCCATACTTGCTAACA+TGG | 0.581588 | 1.1:+49082751 | None:intergenic |
| CTAACCAGAGAACAGCCCTC+AGG | 0.582718 | 1.1:+49081814 | None:intergenic |
| CTTGTGTGGTACCTCTACTT+GGG | 0.584462 | 1.1:+49081467 | None:intergenic |
| GAGCTTTAGCTACCCAAACC+GGG | 0.590884 | 1.1:-49081367 | MS.gene073773:CDS |
| TCATCTAACAATAAAATGTG+AGG | 0.596826 | 1.1:+49080958 | None:intergenic |
| CTCAGGTCAAGATGATTAGT+GGG | 0.599587 | 1.1:+49081831 | None:intergenic |
| ACTTCAATAAGCTGCAGAAG+TGG | 0.601176 | 1.1:+49081390 | None:intergenic |
| GGCTCAACAAGATAAGGTGA+AGG | 0.604308 | 1.1:-49081562 | MS.gene073773:CDS |
| TCCTACAAAATCCTTTAGTG+GGG | 0.604851 | 1.1:-49081922 | MS.gene073773:CDS |
| TTGATGTTGGCATTGATATG+GGG | 0.604870 | 1.1:-49081323 | MS.gene073773:CDS |
| TCATCGAGCAATAATAGAGT+GGG | 0.608704 | 1.1:+49081855 | None:intergenic |
| TTCCGATTCATCATCATCAG+AGG | 0.609922 | 1.1:+49082631 | None:intergenic |
| GGTGATTTGGTTCCAAGTGA+AGG | 0.610276 | 1.1:-49081237 | MS.gene073773:CDS |
| GGTACTGTAAGAAATTTCCC+TGG | 0.610293 | 1.1:-49080781 | MS.gene073773:CDS |
| TCCGATTCATCATCATCAGA+GGG | 0.611392 | 1.1:+49082632 | None:intergenic |
| GGAGTAAGATGGTTATGACT+AGG | 0.612089 | 1.1:+49081045 | None:intergenic |
| CTGTAGTCTCTATACTTGTG+TGG | 0.612896 | 1.1:+49081453 | None:intergenic |
| TGTAATCCTCAAATGTTCCA+GGG | 0.613886 | 1.1:+49080764 | None:intergenic |
| TTCATCGAGCAATAATAGAG+TGG | 0.615022 | 1.1:+49081854 | None:intergenic |
| CCCATTGTCAAACTATCAGG+AGG | 0.616830 | 1.1:-49081024 | MS.gene073773:CDS |
| GGAGGTAAATAAGAACTATG+AGG | 0.617027 | 1.1:-49081628 | MS.gene073773:CDS |
| AGATAAAGATGATACTAATG+AGG | 0.617215 | 1.1:-49082072 | MS.gene073773:CDS |
| TCGCTGGAAGAAAACTTTGG+TGG | 0.617745 | 1.1:-49081778 | MS.gene073773:CDS |
| TCAGCAATAGACACCTCAAG+TGG | 0.621486 | 1.1:+49082572 | None:intergenic |
| GGAGGGACTTAGTAAGCAAG+AGG | 0.623814 | 1.1:-49081100 | MS.gene073773:CDS |
| TTGGTTCTTGATGGAGACGA+TGG | 0.625464 | 1.1:-49082428 | MS.gene073773:CDS |
| GGTCTGGATGCAGACGAAGA+AGG | 0.626289 | 1.1:+49081124 | None:intergenic |
| CCACTAATCATCTTGACCTG+AGG | 0.627165 | 1.1:-49081830 | MS.gene073773:CDS |
| ATGAACAATTACACCTGATG+GGG | 0.627362 | 1.1:-49082016 | MS.gene073773:CDS |
| GGCTGATGTTAAGCCACTTG+AGG | 0.627689 | 1.1:-49082585 | MS.gene073773:CDS |
| CTACCTCCTGCTCAACCAGA+AGG | 0.630434 | 1.1:+49082207 | None:intergenic |
| TGAGGATGAGGCCCAAGTAG+AGG | 0.632111 | 1.1:-49081478 | MS.gene073773:CDS |
| TCAATAAGCTGCAGAAGTGG+CGG | 0.634944 | 1.1:+49081393 | None:intergenic |
| AGCACCATTAGGCCCAACAA+TGG | 0.640352 | 1.1:+49081290 | None:intergenic |
| GTGGGAACAACGTTGTAGGG+AGG | 0.657576 | 1.1:-49081646 | MS.gene073773:CDS |
| AGGAGGGCAGAAAGCTCGGG+TGG | 0.658600 | 1.1:-49081007 | MS.gene073773:CDS |
| ACTAACAAGAACAACTCCAC+CGG | 0.661104 | 1.1:+49080873 | None:intergenic |
| CCTACAAAATCCTTTAGTGG+GGG | 0.666533 | 1.1:-49081921 | MS.gene073773:CDS |
| AAGTAAGGGAAAGTTTGATG+AGG | 0.667604 | 1.1:-49081496 | MS.gene073773:CDS |
| AAATTCAGGACCATCTACAA+AGG | 0.671725 | 1.1:-49082825 | MS.gene073773:CDS |
| CGTCTGCATCCAGACCAGGA+GGG | 0.678505 | 1.1:-49081117 | MS.gene073773:CDS |
| TCGTCTGCATCCAGACCAGG+AGG | 0.681595 | 1.1:-49081118 | MS.gene073773:CDS |
| CCATTGTCAAACTATCAGGA+GGG | 0.685258 | 1.1:-49081023 | MS.gene073773:CDS |
| GTGTGTGTAAGGATGAAGAA+CGG | 0.687698 | 1.1:-49080828 | MS.gene073773:CDS |
| GCACTGCATAAATTCACCGG+TGG | 0.691518 | 1.1:-49080889 | MS.gene073773:CDS |
| GATTCATCATCATCAGAGGG+AGG | 0.699607 | 1.1:+49082635 | None:intergenic |
| CTTTAGCTACCCAAACCGGG+AGG | 0.713201 | 1.1:-49081364 | MS.gene073773:CDS |
| CAAGTATAGAGACTACAGCG+TGG | 0.794408 | 1.1:-49081448 | MS.gene073773:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTCAAACTTCATTTCTAT+CGG | - | chr1.1:49081870-49081889 | MS.gene073773:CDS | 20.0% |
| !!! | AATTATGATGCTTTTAAAAG+CGG | - | chr1.1:49081896-49081915 | MS.gene073773:CDS | 20.0% |
| ! | AAGAAAAAGTCAGAAAATTC+AGG | - | chr1.1:49080726-49080745 | MS.gene073773:CDS | 25.0% |
| ! | AGATAAAGATGATACTAATG+AGG | - | chr1.1:49081493-49081512 | MS.gene073773:CDS | 25.0% |
| ! | TCATCTAACAATAAAATGTG+AGG | + | chr1.1:49082610-49082629 | None:intergenic | 25.0% |
| ! | TTAGAAACATCTTTACTACA+TGG | + | chr1.1:49080771-49080790 | None:intergenic | 25.0% |
| ! | TTTCAAACTTCATTTCTATC+GGG | - | chr1.1:49081871-49081890 | MS.gene073773:CDS | 25.0% |
| !! | TAGTAAAGATGTTTCTAAGA+AGG | - | chr1.1:49080773-49080792 | MS.gene073773:CDS | 25.0% |
| !!! | ATTATGATGCTTTTAAAAGC+GGG | - | chr1.1:49081897-49081916 | MS.gene073773:CDS | 25.0% |
| !!! | TTCGAAGAAGATACTTTTTT+AGG | + | chr1.1:49080852-49080871 | None:intergenic | 25.0% |
| AGAAATTGAAAGCAGCTAAA+AGG | - | chr1.1:49081969-49081988 | MS.gene073773:CDS | 30.0% | |
| GTGCAAAACTTGGTAAATTT+GGG | - | chr1.1:49082494-49082513 | MS.gene073773:CDS | 30.0% | |
| TATGAACAATTACACCTGAT+GGG | - | chr1.1:49081548-49081567 | MS.gene073773:CDS | 30.0% | |
| TGAAGATATCTCATGGAAAA+CGG | - | chr1.1:49081243-49081262 | MS.gene073773:CDS | 30.0% | |
| TTCAAACTTCATTTCTATCG+GGG | - | chr1.1:49081872-49081891 | MS.gene073773:CDS | 30.0% | |
| TTCAACATTAGCTGAAACAA+CGG | + | chr1.1:49081411-49081430 | None:intergenic | 30.0% | |
| ! | CAAATTTACCAAGTTTTGCA+CGG | + | chr1.1:49082495-49082514 | None:intergenic | 30.0% |
| !! | TAAAATGTGAGGTTTTGACA+TGG | + | chr1.1:49082599-49082618 | None:intergenic | 30.0% |
| !!! | ATCAAAGATTTTAGCTGGTT+TGG | - | chr1.1:49081595-49081614 | MS.gene073773:CDS | 30.0% |
| !!! | TCAAAGATTTTAGCTGGTTT+GGG | - | chr1.1:49081596-49081615 | MS.gene073773:CDS | 30.0% |
| AAATTCAGGACCATCTACAA+AGG | - | chr1.1:49080740-49080759 | MS.gene073773:CDS | 35.0% | |
| AAATTTCCCTGGAACATTTG+AGG | - | chr1.1:49082795-49082814 | MS.gene073773:CDS | 35.0% | |
| AAGTAAGGGAAAGTTTGATG+AGG | - | chr1.1:49082069-49082088 | MS.gene073773:CDS | 35.0% | |
| ACACTTCTATATCTTCTAGC+TGG | - | chr1.1:49082307-49082326 | MS.gene073773:CDS | 35.0% | |
| ACGTCAATATTCTTAGGTAC+TGG | + | chr1.1:49081338-49081357 | None:intergenic | 35.0% | |
| AGAAGGACGTCAATATTCTT+AGG | + | chr1.1:49081344-49081363 | None:intergenic | 35.0% | |
| AGAAGTCAGAAATTGAGGAT+AGG | - | chr1.1:49082361-49082380 | MS.gene073773:CDS | 35.0% | |
| AGATGATACTAATGAGGAAG+AGG | - | chr1.1:49081499-49081518 | MS.gene073773:CDS | 35.0% | |
| ATATCTCATGGAAAACGGTA+TGG | - | chr1.1:49081248-49081267 | MS.gene073773:CDS | 35.0% | |
| ATGAACAATTACACCTGATG+GGG | - | chr1.1:49081549-49081568 | MS.gene073773:CDS | 35.0% | |
| ATGAAGAACGGAGTCAAATA+TGG | - | chr1.1:49082749-49082768 | MS.gene073773:CDS | 35.0% | |
| CGTGCAAAACTTGGTAAATT+TGG | - | chr1.1:49082493-49082512 | MS.gene073773:CDS | 35.0% | |
| GAAGTCAGAAATTGAGGATA+GGG | - | chr1.1:49082362-49082381 | MS.gene073773:CDS | 35.0% | |
| GCATCGAAAAGCAAAAGTAA+GGG | - | chr1.1:49082055-49082074 | MS.gene073773:CDS | 35.0% | |
| GGAGGTAAATAAGAACTATG+AGG | - | chr1.1:49081937-49081956 | MS.gene073773:CDS | 35.0% | |
| GTATGAACAATTACACCTGA+TGG | - | chr1.1:49081547-49081566 | MS.gene073773:CDS | 35.0% | |
| GTCCTACAAAATCCTTTAGT+GGG | - | chr1.1:49081642-49081661 | MS.gene073773:CDS | 35.0% | |
| GTGTTTCATCCATTGTTAGT+AGG | + | chr1.1:49082411-49082430 | None:intergenic | 35.0% | |
| TAAGAATATTGACGTCCTTC+TGG | - | chr1.1:49081343-49081362 | MS.gene073773:CDS | 35.0% | |
| TCATCGAGCAATAATAGAGT+GGG | + | chr1.1:49081713-49081732 | None:intergenic | 35.0% | |
| TCCTACAAAATCCTTTAGTG+GGG | - | chr1.1:49081643-49081662 | MS.gene073773:CDS | 35.0% | |
| TGAAGAACGGAGTCAAATAT+GGG | - | chr1.1:49082750-49082769 | MS.gene073773:CDS | 35.0% | |
| TGGAACATTTGAGGATTACA+AGG | - | chr1.1:49082804-49082823 | MS.gene073773:CDS | 35.0% | |
| TGTAATCCTCAAATGTTCCA+GGG | + | chr1.1:49082804-49082823 | None:intergenic | 35.0% | |
| TGTCCTACAAAATCCTTTAG+TGG | - | chr1.1:49081641-49081660 | MS.gene073773:CDS | 35.0% | |
| TTAATGTTGTCATCCCAAGT+CGG | - | chr1.1:49081111-49081130 | MS.gene073773:CDS | 35.0% | |
| TTCATCGAGCAATAATAGAG+TGG | + | chr1.1:49081714-49081733 | None:intergenic | 35.0% | |
| TTCCATATCCAGATGATTTG+TGG | + | chr1.1:49082635-49082654 | None:intergenic | 35.0% | |
| TTCGAAGAAGTCAGAAATTG+AGG | - | chr1.1:49082356-49082375 | MS.gene073773:CDS | 35.0% | |
| TTGTAATCCTCAAATGTTCC+AGG | + | chr1.1:49082805-49082824 | None:intergenic | 35.0% | |
| ! | AGCATCGAAAAGCAAAAGTA+AGG | - | chr1.1:49082054-49082073 | MS.gene073773:CDS | 35.0% |
| ! | ATATCTTCTAGCTGGTGATT+TGG | - | chr1.1:49082315-49082334 | MS.gene073773:CDS | 35.0% |
| ! | ATTGATTTCACGTGTGTGTA+AGG | - | chr1.1:49082726-49082745 | MS.gene073773:CDS | 35.0% |
| ! | CAAATATGGGTTGTTGAAGA+TGG | - | chr1.1:49082763-49082782 | MS.gene073773:CDS | 35.0% |
| ! | CATCTGGATATGGAAAGTAT+TGG | - | chr1.1:49082640-49082659 | MS.gene073773:CDS | 35.0% |
| ! | GGTTTTACAAAGGATATGCA+GGG | - | chr1.1:49081617-49081636 | MS.gene073773:CDS | 35.0% |
| ! | TCCATATCCAGATGATTTGT+GGG | + | chr1.1:49082634-49082653 | None:intergenic | 35.0% |
| ! | TTCATCCATACTTGCTAACA+TGG | + | chr1.1:49080817-49080836 | None:intergenic | 35.0% |
| !! | CAAGCATCAAAGATTTTAGC+TGG | - | chr1.1:49081590-49081609 | MS.gene073773:CDS | 35.0% |
| !! | GTTGATGTTGGCATTGATAT+GGG | - | chr1.1:49082241-49082260 | MS.gene073773:CDS | 35.0% |
| !! | TATGGAAAGTATTGGTGCAT+TGG | - | chr1.1:49082648-49082667 | MS.gene073773:CDS | 35.0% |
| !! | TGTTGATGTTGGCATTGATA+TGG | - | chr1.1:49082240-49082259 | MS.gene073773:CDS | 35.0% |
| !! | TTGATGTTGGCATTGATATG+GGG | - | chr1.1:49082242-49082261 | MS.gene073773:CDS | 35.0% |
| !!! | AGATATTTTAGCTGCCCATT+TGG | - | chr1.1:49081043-49081062 | MS.gene073773:CDS | 35.0% |
| ACCCACAAATCATCTGGATA+TGG | - | chr1.1:49082630-49082649 | MS.gene073773:CDS | 40.0% | |
| ACTAACAAGAACAACTCCAC+CGG | + | chr1.1:49082695-49082714 | None:intergenic | 40.0% | |
| ACTAATGAGGAAGAGGATGT+AGG | - | chr1.1:49081506-49081525 | MS.gene073773:CDS | 40.0% | |
| ACTCCCATTGTCAAACTATC+AGG | - | chr1.1:49082538-49082557 | MS.gene073773:CDS | 40.0% | |
| ACTTCAATAAGCTGCAGAAG+TGG | + | chr1.1:49082178-49082197 | None:intergenic | 40.0% | |
| AGACAAGGCTCAACAAGATA+AGG | - | chr1.1:49081997-49082016 | MS.gene073773:CDS | 40.0% | |
| AGACTCTCAGATGTTGATGT+TGG | - | chr1.1:49082229-49082248 | MS.gene073773:CDS | 40.0% | |
| AGATGAACCCACAAATCATC+TGG | - | chr1.1:49082624-49082643 | MS.gene073773:CDS | 40.0% | |
| CACTAATCATCTTGACCTGA+GGG | - | chr1.1:49081736-49081755 | MS.gene073773:CDS | 40.0% | |
| CCATTGTCAAACTATCAGGA+GGG | - | chr1.1:49082542-49082561 | MS.gene073773:CDS | 40.0% | |
| CCTACAAAATCCTTTAGTGG+GGG | - | chr1.1:49081644-49081663 | MS.gene073773:CDS | 40.0% | |
| CCTCCTGATAGTTTGACAAT+GGG | + | chr1.1:49082544-49082563 | None:intergenic | 40.0% | |
| CTCAGGTCAAGATGATTAGT+GGG | + | chr1.1:49081737-49081756 | None:intergenic | 40.0% | |
| CTGTAGTCTCTATACTTGTG+TGG | + | chr1.1:49082115-49082134 | None:intergenic | 40.0% | |
| CTTTGTGGACCTACTAACAA+TGG | - | chr1.1:49082399-49082418 | MS.gene073773:CDS | 40.0% | |
| GAGATATTCCCAACACTTTG+TGG | - | chr1.1:49082384-49082403 | MS.gene073773:CDS | 40.0% | |
| GATCTACAAAATGCAGCTTC+AGG | - | chr1.1:49081458-49081477 | MS.gene073773:CDS | 40.0% | |
| GATGCACTGCATAAATTCAC+CGG | - | chr1.1:49082673-49082692 | MS.gene073773:CDS | 40.0% | |
| GCAAAGAAAGAAGCTCTTAG+AGG | - | chr1.1:49081074-49081093 | MS.gene073773:CDS | 40.0% | |
| GCATCAGTGAAGATATCTCA+TGG | - | chr1.1:49081236-49081255 | MS.gene073773:CDS | 40.0% | |
| GGAGTAAGATGGTTATGACT+AGG | + | chr1.1:49082523-49082542 | None:intergenic | 40.0% | |
| GGTACTGTAAGAAATTTCCC+TGG | - | chr1.1:49082784-49082803 | MS.gene073773:CDS | 40.0% | |
| GTGTGTGTAAGGATGAAGAA+CGG | - | chr1.1:49082737-49082756 | MS.gene073773:CDS | 40.0% | |
| GTTTGACAATGGGAGTAAGA+TGG | + | chr1.1:49082534-49082553 | None:intergenic | 40.0% | |
| TAATGTTGTCATCCCAAGTC+GGG | - | chr1.1:49081112-49081131 | MS.gene073773:CDS | 40.0% | |
| TCAGTGTATGCAGAAGCTTT+CGG | + | chr1.1:49080897-49080916 | None:intergenic | 40.0% | |
| TCATGGAAAACGGTATGGTT+TGG | - | chr1.1:49081253-49081272 | MS.gene073773:CDS | 40.0% | |
| TCCGATTCATCATCATCAGA+GGG | + | chr1.1:49080936-49080955 | None:intergenic | 40.0% | |
| TCTCAGAGCATACTGTATTG+AGG | + | chr1.1:49081835-49081854 | None:intergenic | 40.0% | |
| TTAGTAGGTCCACAAAGTGT+TGG | + | chr1.1:49082396-49082415 | None:intergenic | 40.0% | |
| TTCCGATTCATCATCATCAG+AGG | + | chr1.1:49080937-49080956 | None:intergenic | 40.0% | |
| TTGAAAGCAGCTAAAAGGAC+TGG | - | chr1.1:49081974-49081993 | MS.gene073773:CDS | 40.0% | |
| TTGACTTTCCCATTCCATTC+GGG | + | chr1.1:49081283-49081302 | None:intergenic | 40.0% | |
| ! | AATTTTTCTGTGTCTGCTCG+TGG | - | chr1.1:49081194-49081213 | MS.gene073773:CDS | 40.0% |
| ! | CATGGTTTAGCCTTTGTAGA+TGG | + | chr1.1:49080753-49080772 | None:intergenic | 40.0% |
| ! | GGGTTTTACAAAGGATATGC+AGG | - | chr1.1:49081616-49081635 | MS.gene073773:CDS | 40.0% |
| ! | GTAGATTTTCCAGCACCATT+AGG | + | chr1.1:49082289-49082308 | None:intergenic | 40.0% |
| ! | GTTGACTTTCCCATTCCATT+CGG | + | chr1.1:49081284-49081303 | None:intergenic | 40.0% |
| ! | TAGTAGGTCCACAAAGTGTT+GGG | + | chr1.1:49082395-49082414 | None:intergenic | 40.0% |
| ! | TCCCTCTGATGATGATGAAT+CGG | - | chr1.1:49080932-49080951 | MS.gene073773:CDS | 40.0% |
| ! | TGATGATGATGAATCGGAAG+AGG | - | chr1.1:49080938-49080957 | MS.gene073773:CDS | 40.0% |
| !! | ATGATGCTTTTAAAAGCGGG+TGG | - | chr1.1:49081900-49081919 | MS.gene073773:CDS | 40.0% |
| !! | TGATGCTTTTAAAAGCGGGT+GGG | - | chr1.1:49081901-49081920 | MS.gene073773:CDS | 40.0% |
| !!! | AGCTGGTTTGGGTTTTACAA+AGG | - | chr1.1:49081607-49081626 | MS.gene073773:CDS | 40.0% |
| !!! | CACTTTTGAAGCTTCTTGCT+TGG | - | chr1.1:49081303-49081322 | MS.gene073773:CDS | 40.0% |
| !!! | TTTTGAAGCTTCTTGCTTGG+AGG | - | chr1.1:49081306-49081325 | MS.gene073773:CDS | 40.0% |
| AATGCAGCTTCAGGTGAAGA+AGG | - | chr1.1:49081467-49081486 | MS.gene073773:CDS | 45.0% | |
| ACTTGTGTGGTACCTCTACT+TGG | + | chr1.1:49082102-49082121 | None:intergenic | 45.0% | |
| AGCTAAAAGGACTGGAGACA+AGG | - | chr1.1:49081982-49082001 | MS.gene073773:CDS | 45.0% | |
| CAAGTATAGAGACTACAGCG+TGG | - | chr1.1:49082117-49082136 | MS.gene073773:CDS | 45.0% | |
| CCACTAATCATCTTGACCTG+AGG | - | chr1.1:49081735-49081754 | MS.gene073773:CDS | 45.0% | |
| CCCATTGTCAAACTATCAGG+AGG | - | chr1.1:49082541-49082560 | MS.gene073773:CDS | 45.0% | |
| CCCTCCTGATAGTTTGACAA+TGG | + | chr1.1:49082545-49082564 | None:intergenic | 45.0% | |
| CCTCAGGTCAAGATGATTAG+TGG | + | chr1.1:49081738-49081757 | None:intergenic | 45.0% | |
| CTCTGCCATGTTAGCAAGTA+TGG | - | chr1.1:49080809-49080828 | MS.gene073773:CDS | 45.0% | |
| CTTCGAAGTTCACCTTCACT+TGG | + | chr1.1:49082343-49082362 | None:intergenic | 45.0% | |
| CTTGTGTGGTACCTCTACTT+GGG | + | chr1.1:49082101-49082120 | None:intergenic | 45.0% | |
| CTTTGCCTGTTCAGCCAAAT+GGG | + | chr1.1:49081060-49081079 | None:intergenic | 45.0% | |
| GATTCATCATCATCAGAGGG+AGG | + | chr1.1:49080933-49080952 | None:intergenic | 45.0% | |
| GGAGCATGAGCAAAGACATA+GGG | - | chr1.1:49080959-49080978 | MS.gene073773:CDS | 45.0% | |
| GGCTCAACAAGATAAGGTGA+AGG | - | chr1.1:49082003-49082022 | MS.gene073773:CDS | 45.0% | |
| GGGAAAGTTTGATGAGGATG+AGG | - | chr1.1:49082075-49082094 | MS.gene073773:CDS | 45.0% | |
| TCAATAAGCTGCAGAAGTGG+CGG | + | chr1.1:49082175-49082194 | None:intergenic | 45.0% | |
| TCAGCAATAGACACCTCAAG+TGG | + | chr1.1:49080996-49081015 | None:intergenic | 45.0% | |
| TCGCTGGAAGAAAACTTTGG+TGG | - | chr1.1:49081787-49081806 | MS.gene073773:CDS | 45.0% | |
| TCTTTGCCTGTTCAGCCAAA+TGG | + | chr1.1:49081061-49081080 | None:intergenic | 45.0% | |
| ! | AGGAGCATGAGCAAAGACAT+AGG | - | chr1.1:49080958-49080977 | MS.gene073773:CDS | 45.0% |
| ! | CCCCCACTAAAGGATTTTGT+AGG | + | chr1.1:49081647-49081666 | None:intergenic | 45.0% |
| ! | GTGTCGCTGGAAGAAAACTT+TGG | - | chr1.1:49081784-49081803 | MS.gene073773:CDS | 45.0% |
| ! | TGAGCTTTAGCTACCCAAAC+CGG | - | chr1.1:49082197-49082216 | MS.gene073773:CDS | 45.0% |
| ! | TTGGTTCTTGATGGAGACGA+TGG | - | chr1.1:49081137-49081156 | MS.gene073773:CDS | 45.0% |
| !! | AGACGAAGAAGGTACTGAAC+AGG | + | chr1.1:49082433-49082452 | None:intergenic | 45.0% |
| !! | GGAAAACGGTATGGTTTGGT+TGG | - | chr1.1:49081257-49081276 | MS.gene073773:CDS | 45.0% |
| !! | GGTGATTTGGTTCCAAGTGA+AGG | - | chr1.1:49082328-49082347 | MS.gene073773:CDS | 45.0% |
| !! | TAGAAGAGTACTTGTGTCGC+TGG | - | chr1.1:49081771-49081790 | MS.gene073773:CDS | 45.0% |
| !!! | TTCGGAGCAGGTTTTGACTT+CGG | + | chr1.1:49080879-49080898 | None:intergenic | 45.0% |
| AGCACCATTAGGCCCAACAA+TGG | + | chr1.1:49082278-49082297 | None:intergenic | 50.0% | |
| ATTGTTGGGCCTAATGGTGC+TGG | - | chr1.1:49082277-49082296 | MS.gene073773:CDS | 50.0% | |
| CAAAATCCTTTAGTGGGGGC+TGG | - | chr1.1:49081648-49081667 | MS.gene073773:CDS | 50.0% | |
| CAAGAACCAAAGCCCGACTT+GGG | + | chr1.1:49081127-49081146 | None:intergenic | 50.0% | |
| CTTGCTTACTAAGTCCCTCC+TGG | + | chr1.1:49082465-49082484 | None:intergenic | 50.0% | |
| GCACTGCATAAATTCACCGG+TGG | - | chr1.1:49082676-49082695 | MS.gene073773:CDS | 50.0% | |
| GCTCTGTAGGTTCAGGAAAG+TGG | + | chr1.1:49082147-49082166 | None:intergenic | 50.0% | |
| GGACTCGTGTTGCCATTGTT+GGG | - | chr1.1:49082263-49082282 | MS.gene073773:CDS | 50.0% | |
| GGAGGGACTTAGTAAGCAAG+AGG | - | chr1.1:49082465-49082484 | MS.gene073773:CDS | 50.0% | |
| GGCTGATGTTAAGCCACTTG+AGG | - | chr1.1:49080980-49080999 | MS.gene073773:CDS | 50.0% | |
| GTTGCCATTGTTGGGCCTAA+TGG | - | chr1.1:49082271-49082290 | MS.gene073773:CDS | 50.0% | |
| TATCAGGAGGGCAGAAAGCT+CGG | - | chr1.1:49082554-49082573 | MS.gene073773:CDS | 50.0% | |
| TATGCAGAAGCTTTCGGAGC+AGG | + | chr1.1:49080891-49080910 | None:intergenic | 50.0% | |
| TCAAGAACCAAAGCCCGACT+TGG | + | chr1.1:49081128-49081147 | None:intergenic | 50.0% | |
| TTACTAAGTCCCTCCTGGTC+TGG | + | chr1.1:49082460-49082479 | None:intergenic | 50.0% | |
| ! | AGTCTGAAATCCTCCCGGTT+TGG | + | chr1.1:49082214-49082233 | None:intergenic | 50.0% |
| ! | CTGAGAGTCTGAAATCCTCC+CGG | + | chr1.1:49082219-49082238 | None:intergenic | 50.0% |
| ! | GAGCTTTAGCTACCCAAACC+GGG | - | chr1.1:49082198-49082217 | MS.gene073773:CDS | 50.0% |
| ! | GTCTGAAATCCTCCCGGTTT+GGG | + | chr1.1:49082213-49082232 | None:intergenic | 50.0% |
| ! | TTGGTTGGCCCGAATGGAAT+GGG | - | chr1.1:49081272-49081291 | MS.gene073773:CDS | 50.0% |
| ! | TTTGGTTGGCCCGAATGGAA+TGG | - | chr1.1:49081271-49081290 | MS.gene073773:CDS | 50.0% |
| !! | AGTCGGGCTTTGGTTCTTGA+TGG | - | chr1.1:49081128-49081147 | MS.gene073773:CDS | 50.0% |
| !! | TATGGTTTGGTTGGCCCGAA+TGG | - | chr1.1:49081266-49081285 | MS.gene073773:CDS | 50.0% |
| AATCCTTTAGTGGGGGCTGG+AGG | - | chr1.1:49081651-49081670 | MS.gene073773:CDS | 55.0% | |
| AGCTGCCCATTTGGCTGAAC+AGG | - | chr1.1:49081052-49081071 | MS.gene073773:CDS | 55.0% | |
| ATCAGGAGGGCAGAAAGCTC+GGG | - | chr1.1:49082555-49082574 | MS.gene073773:CDS | 55.0% | |
| CGGGTGGGAACAACGTTGTA+GGG | - | chr1.1:49081916-49081935 | MS.gene073773:CDS | 55.0% | |
| CTAACCAGAGAACAGCCCTC+AGG | + | chr1.1:49081754-49081773 | None:intergenic | 55.0% | |
| CTACCTCCTGCTCAACCAGA+AGG | + | chr1.1:49081361-49081380 | None:intergenic | 55.0% | |
| CTGGTTGAGCAGGAGGTAGT+TGG | - | chr1.1:49081362-49081381 | MS.gene073773:CDS | 55.0% | |
| CTTTAGCTACCCAAACCGGG+AGG | - | chr1.1:49082201-49082220 | MS.gene073773:CDS | 55.0% | |
| GAGGCTGTCCGTGCAAAACT+TGG | - | chr1.1:49082484-49082503 | MS.gene073773:CDS | 55.0% | |
| GGGACTCGTGTTGCCATTGT+TGG | - | chr1.1:49082262-49082281 | MS.gene073773:CDS | 55.0% | |
| GGTCTGGATGCAGACGAAGA+AGG | + | chr1.1:49082444-49082463 | None:intergenic | 55.0% | |
| GGTGTGAGCTCTGTAGGTTC+AGG | + | chr1.1:49082154-49082173 | None:intergenic | 55.0% | |
| GTGGGAACAACGTTGTAGGG+AGG | - | chr1.1:49081919-49081938 | MS.gene073773:CDS | 55.0% | |
| TCTTCGTCTGCATCCAGACC+AGG | - | chr1.1:49082444-49082463 | MS.gene073773:CDS | 55.0% | |
| TGAGGATGAGGCCCAAGTAG+AGG | - | chr1.1:49082087-49082106 | MS.gene073773:CDS | 55.0% | |
| TGTCATCCCAAGTCGGGCTT+TGG | - | chr1.1:49081118-49081137 | MS.gene073773:CDS | 55.0% | |
| TTGACCTGAGGGCTGTTCTC+TGG | - | chr1.1:49081747-49081766 | MS.gene073773:CDS | 55.0% | |
| ! | TGACGTCCTTCTGGTTGAGC+AGG | - | chr1.1:49081352-49081371 | MS.gene073773:CDS | 55.0% |
| AGTGGCGGTGTGAGCTCTGT+AGG | + | chr1.1:49082160-49082179 | None:intergenic | 60.0% | |
| CAGCAGCATCAGACCCCATC+AGG | + | chr1.1:49081565-49081584 | None:intergenic | 60.0% | |
| CATCCTCCAGCCCCCACTAA+AGG | + | chr1.1:49081657-49081676 | None:intergenic | 60.0% | |
| CGTCTGCATCCAGACCAGGA+GGG | - | chr1.1:49082448-49082467 | MS.gene073773:CDS | 60.0% | |
| GCGGGTGGGAACAACGTTGT+AGG | - | chr1.1:49081915-49081934 | MS.gene073773:CDS | 60.0% | |
| TCGTCTGCATCCAGACCAGG+AGG | - | chr1.1:49082447-49082466 | MS.gene073773:CDS | 60.0% | |
| ! | CGTCCTTCTGGTTGAGCAGG+AGG | - | chr1.1:49081355-49081374 | MS.gene073773:CDS | 60.0% |
| AGGAGGGCAGAAAGCTCGGG+TGG | - | chr1.1:49082558-49082577 | MS.gene073773:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 49080720 | 49082867 | 49080720 | ID=MS.gene073773 |
| chr1.1 | mRNA | 49080720 | 49082867 | 49080720 | ID=MS.gene073773.t1;Parent=MS.gene073773 |
| chr1.1 | exon | 49080720 | 49082867 | 49080720 | ID=MS.gene073773.t1.exon1;Parent=MS.gene073773.t1 |
| chr1.1 | CDS | 49080720 | 49082867 | 49080720 | ID=cds.MS.gene073773.t1;Parent=MS.gene073773.t1 |
| Gene Sequence |
| Protein sequence |