Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074415.t1 | XP_004501981.1 | 88.1 | 388 | 46 | 0 | 5 | 392 | 3 | 390 | 4.80E-204 | 720.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074415.t1 | Q9FH04 | 71.2 | 375 | 107 | 1 | 17 | 390 | 15 | 389 | 6.4e-165 | 581.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074415.t1 | A0A1S2YAL7 | 88.1 | 388 | 46 | 0 | 5 | 392 | 3 | 390 | 3.5e-204 | 720.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene074415 | MS.gene79768 | PPI |
| MS.gene074415 | MS.gene83309 | PPI |
| MS.gene074415 | MS.gene030545 | PPI |
| MS.gene074415 | MS.gene70145 | PPI |
| MS.gene074415 | MS.gene069804 | PPI |
| MS.gene074415 | MS.gene042841 | PPI |
| MS.gene074415 | MS.gene73688 | PPI |
| MS.gene074415 | MS.gene49741 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074415.t1 | MTR_3g079180 | 81.818 | 385 | 69 | 1 | 8 | 392 | 3 | 386 | 0.0 | 662 |
| MS.gene074415.t1 | MTR_5g087710 | 78.961 | 385 | 79 | 1 | 8 | 392 | 9 | 391 | 0.0 | 633 |
| MS.gene074415.t1 | MTR_3g079170 | 91.481 | 270 | 9 | 1 | 112 | 381 | 26 | 281 | 0.0 | 504 |
| MS.gene074415.t1 | MTR_3g099460 | 60.422 | 379 | 146 | 3 | 16 | 391 | 13 | 390 | 3.89e-161 | 458 |
| MS.gene074415.t1 | MTR_3g099460 | 59.631 | 379 | 142 | 4 | 16 | 391 | 13 | 383 | 8.24e-156 | 444 |
| MS.gene074415.t1 | MTR_1g069430 | 50.798 | 376 | 183 | 2 | 15 | 390 | 4 | 377 | 1.45e-134 | 390 |
| MS.gene074415.t1 | MTR_3g099460 | 59.443 | 323 | 129 | 2 | 70 | 391 | 6 | 327 | 1.69e-133 | 385 |
| MS.gene074415.t1 | MTR_7g099040 | 50.263 | 380 | 175 | 4 | 15 | 388 | 6 | 377 | 5.08e-130 | 379 |
| MS.gene074415.t1 | MTR_6g068930 | 48.936 | 376 | 186 | 4 | 17 | 392 | 8 | 377 | 3.39e-123 | 361 |
| MS.gene074415.t1 | MTR_3g099460 | 63.066 | 287 | 103 | 2 | 16 | 299 | 13 | 299 | 3.16e-120 | 352 |
| MS.gene074415.t1 | MTR_3g089940 | 45.623 | 377 | 203 | 2 | 16 | 392 | 6 | 380 | 1.36e-116 | 344 |
| MS.gene074415.t1 | MTR_7g068330 | 47.287 | 387 | 199 | 4 | 7 | 390 | 1 | 385 | 5.58e-116 | 343 |
| MS.gene074415.t1 | MTR_3g089940 | 45.213 | 376 | 204 | 2 | 17 | 392 | 7 | 380 | 1.60e-115 | 342 |
| MS.gene074415.t1 | MTR_3g089977 | 45.067 | 375 | 204 | 2 | 16 | 390 | 6 | 378 | 2.76e-115 | 341 |
| MS.gene074415.t1 | MTR_3g089970 | 45.358 | 377 | 204 | 2 | 16 | 392 | 7 | 381 | 3.66e-115 | 341 |
| MS.gene074415.t1 | MTR_3g099460 | 62.021 | 287 | 99 | 3 | 16 | 299 | 13 | 292 | 4.96e-115 | 338 |
| MS.gene074415.t1 | MTR_7g068320 | 46.354 | 384 | 200 | 5 | 11 | 390 | 12 | 393 | 1.83e-112 | 334 |
| MS.gene074415.t1 | MTR_0001s0660 | 41.555 | 373 | 210 | 5 | 17 | 388 | 6 | 371 | 5.06e-99 | 302 |
| MS.gene074415.t1 | MTR_5g045710 | 41.867 | 375 | 211 | 6 | 17 | 390 | 6 | 374 | 7.89e-99 | 299 |
| MS.gene074415.t1 | MTR_3g089940 | 45.104 | 337 | 183 | 2 | 16 | 352 | 6 | 340 | 1.81e-98 | 297 |
| MS.gene074415.t1 | MTR_3g089940 | 44.643 | 336 | 184 | 2 | 17 | 352 | 7 | 340 | 2.52e-97 | 294 |
| MS.gene074415.t1 | MTR_5g045710 | 40.136 | 294 | 170 | 5 | 98 | 390 | 3 | 291 | 5.90e-72 | 227 |
| MS.gene074415.t1 | MTR_8g095220 | 31.088 | 386 | 247 | 13 | 13 | 388 | 46 | 422 | 2.84e-37 | 140 |
| MS.gene074415.t1 | MTR_8g095220 | 33.721 | 258 | 160 | 7 | 7 | 256 | 40 | 294 | 4.90e-28 | 112 |
| MS.gene074415.t1 | MTR_6g465010 | 24.128 | 344 | 224 | 9 | 45 | 381 | 23 | 336 | 6.01e-20 | 90.5 |
| MS.gene074415.t1 | MTR_6g466320 | 24.128 | 344 | 224 | 9 | 45 | 381 | 39 | 352 | 1.11e-19 | 90.1 |
| MS.gene074415.t1 | MTR_6g465010 | 24.128 | 344 | 224 | 9 | 45 | 381 | 39 | 352 | 1.11e-19 | 90.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene074415.t1 | AT5G42250 | 71.200 | 375 | 107 | 1 | 17 | 390 | 15 | 389 | 0.0 | 579 |
| MS.gene074415.t1 | AT1G22430 | 60.104 | 386 | 151 | 3 | 9 | 392 | 4 | 388 | 2.92e-168 | 476 |
| MS.gene074415.t1 | AT1G22430 | 60.104 | 386 | 151 | 3 | 9 | 392 | 4 | 388 | 2.92e-168 | 476 |
| MS.gene074415.t1 | AT4G22110 | 61.579 | 380 | 143 | 3 | 15 | 392 | 11 | 389 | 5.85e-167 | 473 |
| MS.gene074415.t1 | AT4G22110 | 61.579 | 380 | 143 | 3 | 15 | 392 | 11 | 389 | 5.85e-167 | 473 |
| MS.gene074415.t1 | AT1G22440 | 60.526 | 380 | 147 | 3 | 15 | 392 | 8 | 386 | 2.20e-163 | 464 |
| MS.gene074415.t1 | AT5G43940 | 51.337 | 374 | 180 | 2 | 15 | 388 | 4 | 375 | 3.43e-137 | 397 |
| MS.gene074415.t1 | AT5G43940 | 49.482 | 386 | 181 | 3 | 15 | 388 | 4 | 387 | 5.26e-133 | 387 |
| MS.gene074415.t1 | AT1G22430 | 61.644 | 292 | 110 | 2 | 9 | 298 | 4 | 295 | 6.21e-128 | 371 |
| MS.gene074415.t1 | AT5G24760 | 48.571 | 385 | 192 | 4 | 8 | 392 | 3 | 381 | 4.96e-126 | 369 |
| MS.gene074415.t1 | AT1G64710 | 47.507 | 381 | 191 | 6 | 15 | 390 | 4 | 380 | 1.74e-120 | 354 |
| MS.gene074415.t1 | AT1G77120 | 47.340 | 376 | 194 | 4 | 16 | 390 | 5 | 377 | 4.26e-119 | 351 |
| MS.gene074415.t1 | AT5G24760 | 48.603 | 358 | 178 | 4 | 35 | 392 | 1 | 352 | 2.19e-117 | 345 |
| MS.gene074415.t1 | AT5G24760 | 48.603 | 358 | 178 | 4 | 35 | 392 | 1 | 352 | 2.19e-117 | 345 |
| MS.gene074415.t1 | AT1G32780 | 47.949 | 390 | 187 | 7 | 15 | 392 | 5 | 390 | 5.85e-115 | 341 |
| MS.gene074415.t1 | AT1G22430 | 60.300 | 267 | 104 | 2 | 9 | 273 | 4 | 270 | 4.51e-113 | 332 |
| MS.gene074415.t1 | AT1G22430 | 60.300 | 267 | 104 | 2 | 9 | 273 | 4 | 270 | 4.51e-113 | 332 |
| MS.gene074415.t1 | AT1G64710 | 46.537 | 361 | 184 | 6 | 35 | 390 | 1 | 357 | 1.00e-111 | 331 |
| MS.gene074415.t1 | AT4G22110 | 63.672 | 256 | 91 | 2 | 15 | 268 | 11 | 266 | 1.35e-111 | 328 |
| MS.gene074415.t1 | AT1G64710 | 45.161 | 310 | 162 | 5 | 85 | 390 | 6 | 311 | 1.27e-90 | 276 |
| MS.gene074415.t1 | AT5G24760 | 50.988 | 253 | 121 | 3 | 140 | 392 | 18 | 267 | 7.31e-83 | 254 |
| MS.gene074415.t1 | AT5G63620 | 27.174 | 368 | 254 | 8 | 22 | 382 | 57 | 417 | 7.07e-35 | 133 |
| MS.gene074415.t1 | AT5G63620 | 27.174 | 368 | 254 | 8 | 22 | 382 | 57 | 417 | 1.48e-34 | 132 |
| MS.gene074415.t1 | AT5G63620 | 28.689 | 244 | 167 | 3 | 22 | 259 | 57 | 299 | 6.44e-26 | 107 |
Find 99 sgRNAs with CRISPR-Local
Find 208 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACTCATGAGTTGGAGTTTA+AGG | 0.153657 | 3.4:+75372338 | MS.gene074415:CDS |
| GGGTCAACAGTTGCTATATT+TGG | 0.187036 | 3.4:+75370772 | MS.gene074415:CDS |
| TCACAATCTGGTAGGAAAAT+TGG | 0.217622 | 3.4:-75370283 | None:intergenic |
| TGGATCAATCTTTAGTATAT+TGG | 0.221334 | 3.4:-75370479 | None:intergenic |
| TGTGGAGCAACTAGGATTAT+TGG | 0.249725 | 3.4:+75370936 | MS.gene074415:CDS |
| TCTCCTTGGTTGCCTAGATA+TGG | 0.266835 | 3.4:+75370367 | MS.gene074415:CDS |
| TAGAATTGGTACATGAGATT+TGG | 0.269904 | 3.4:-75372128 | None:intergenic |
| GCCTCATGACCCAAAATTCT+TGG | 0.277018 | 3.4:-75369980 | None:intergenic |
| CCTGATAGGGCATGCCTTCT+CGG | 0.286291 | 3.4:+75370511 | MS.gene074415:CDS |
| AGAATTGGTACATGAGATTT+GGG | 0.318239 | 3.4:-75372127 | None:intergenic |
| ATTTAATCAGGAAAGAAGTT+TGG | 0.318718 | 3.4:+75371390 | MS.gene074415:intron |
| AGCAGACCTTTGCATCTTAT+AGG | 0.331773 | 3.4:-75369527 | None:intergenic |
| CATGATGGGAAGAGCCTTAT+GGG | 0.333914 | 3.4:+75372082 | MS.gene074415:CDS |
| TCATGATGGGAAGAGCCTTA+TGG | 0.347711 | 3.4:+75372081 | MS.gene074415:CDS |
| GGTCAACAGTTGCTATATTT+GGG | 0.357976 | 3.4:+75370773 | MS.gene074415:CDS |
| CCGAGAAGGCATGCCCTATC+AGG | 0.364452 | 3.4:-75370511 | None:intergenic |
| CTCCTTGGTTGCCTAGATAT+GGG | 0.369273 | 3.4:+75370368 | MS.gene074415:CDS |
| GCCACAGTGATGTCACTCTT+TGG | 0.376178 | 3.4:+75369801 | MS.gene074415:CDS |
| TTAACTGCAGGAACTGCAAT+TGG | 0.396378 | 3.4:+75372305 | MS.gene074415:intron |
| AGTGTCTTCGATGTGTGATT+TGG | 0.403564 | 3.4:+75372397 | MS.gene074415:CDS |
| CTCGGTTGTGGTGTATCAAC+AGG | 0.403823 | 3.4:+75370529 | MS.gene074415:CDS |
| GGACTCACAGACTTTGTTCA+TGG | 0.411553 | 3.4:+75371411 | MS.gene074415:CDS |
| AATTCTACTTAAACGTTACA+TGG | 0.412714 | 3.4:+75372144 | MS.gene074415:CDS |
| ACAGTTGCTATATTTGGGCT+TGG | 0.416309 | 3.4:+75370778 | MS.gene074415:CDS |
| GCAGAGGGAGCTAGACTTTG+TGG | 0.419195 | 3.4:+75370918 | MS.gene074415:CDS |
| ATATTTGGGCTTGGATCTGT+TGG | 0.433569 | 3.4:+75370787 | MS.gene074415:CDS |
| ATGTAACGTTTAAGTAGAAT+TGG | 0.436021 | 3.4:-75372142 | None:intergenic |
| ATCCACAAATTCCTCCTGAT+AGG | 0.443711 | 3.4:+75370497 | MS.gene074415:CDS |
| CACCAATGCCTCGTGAAGTT+CGG | 0.446032 | 3.4:+75369753 | MS.gene074415:CDS |
| GCCCTATCAGGAGGAATTTG+TGG | 0.454616 | 3.4:-75370499 | None:intergenic |
| GGGTTTGAGTCCTCCATATG+TGG | 0.456417 | 3.4:-75372107 | None:intergenic |
| TCTATACACTCCTCACAATC+TGG | 0.457455 | 3.4:-75370295 | None:intergenic |
| AGAACAGCAGGTGTGGAGCC+AGG | 0.460110 | 3.4:+75370751 | MS.gene074415:CDS |
| AAACTAGCAACAACAATTGA+AGG | 0.464051 | 3.4:+75369491 | MS.gene074415:CDS |
| TCCCATTCAAAGTTTCTCCT+TGG | 0.467329 | 3.4:+75370353 | MS.gene074415:CDS |
| CTCCATATGTGGATCCCATA+AGG | 0.470691 | 3.4:-75372096 | None:intergenic |
| ATTAGTACAACGGTTGCTCT+TGG | 0.474142 | 3.4:-75370329 | None:intergenic |
| ACTAGATTCACTGACATAAA+CGG | 0.475270 | 3.4:+75370394 | MS.gene074415:CDS |
| AATCTAGTGTTCCCATATCT+AGG | 0.479844 | 3.4:-75370379 | None:intergenic |
| GCTTGGATCTGTTGGATTAG+CGG | 0.482799 | 3.4:+75370795 | MS.gene074415:CDS |
| AGCCTTATGGGATCCACATA+TGG | 0.485976 | 3.4:+75372094 | MS.gene074415:CDS |
| TCTATAACCAATGGCTCACC+AGG | 0.492988 | 3.4:-75369713 | None:intergenic |
| TGTCACTCTTTGGAAGATGC+AGG | 0.494222 | 3.4:+75369811 | MS.gene074415:CDS |
| CTAGACTTTGTGGAGCAACT+AGG | 0.495288 | 3.4:+75370928 | MS.gene074415:CDS |
| TGGAAACAAATCTGTGAGCC+AGG | 0.500954 | 3.4:+75371443 | MS.gene074415:CDS |
| AAGGAAACCTGGTGAGCCAT+TGG | 0.503675 | 3.4:+75369706 | MS.gene074415:CDS |
| CGAACTTCACGAGGCATTGG+TGG | 0.505809 | 3.4:-75369752 | None:intergenic |
| AACCAAGGAGAAACTTTGAA+TGG | 0.508581 | 3.4:-75370355 | None:intergenic |
| TCTAGTGAGGTCCTTCATGA+TGG | 0.513744 | 3.4:+75372067 | MS.gene074415:CDS |
| ACAACAATTGAAGGAAAAGA+AGG | 0.514230 | 3.4:+75369500 | MS.gene074415:CDS |
| ATCCGAACTTCACGAGGCAT+TGG | 0.516695 | 3.4:-75369755 | None:intergenic |
| AGCATATGCTTCTTGTAGAA+AGG | 0.517256 | 3.4:+75371702 | MS.gene074415:CDS |
| TAAATTTGTGACTCATGAGT+TGG | 0.518516 | 3.4:+75372329 | MS.gene074415:CDS |
| TAGTTTATGATTGTGTTCCA+TGG | 0.520540 | 3.4:-75369474 | None:intergenic |
| GATGTAACTGAAGTAACAAA+AGG | 0.522782 | 3.4:+75370247 | MS.gene074415:CDS |
| ACCAAGGAGAAACTTTGAAT+GGG | 0.524737 | 3.4:-75370354 | None:intergenic |
| GAACAGCAGGTGTGGAGCCA+GGG | 0.526658 | 3.4:+75370752 | MS.gene074415:CDS |
| TTGTAGGGGTAGGTGCTGCT+TGG | 0.528518 | 3.4:+75370728 | MS.gene074415:intron |
| AGGGCATGCCTTCTCGGTTG+TGG | 0.531330 | 3.4:+75370517 | MS.gene074415:CDS |
| GCTGCTGTTGCAAGGAAACC+TGG | 0.533031 | 3.4:+75369695 | MS.gene074415:intron |
| GGTGCTGCTTGGAGAACAGC+AGG | 0.537682 | 3.4:+75370739 | MS.gene074415:CDS |
| TGTAGGGTTGTGGAAAGCGT+AGG | 0.539712 | 3.4:+75370220 | MS.gene074415:intron |
| ATGTGTTGGTATGACATCAT+TGG | 0.553416 | 3.4:+75371672 | MS.gene074415:CDS |
| CTGAGGCTTATCCTAGCTCC+TGG | 0.554246 | 3.4:-75372043 | None:intergenic |
| GTAGGGTTGTGGAAAGCGTA+GGG | 0.558720 | 3.4:+75370221 | MS.gene074415:intron |
| GGTTGTGGAAAGCGTAGGGA+AGG | 0.560131 | 3.4:+75370225 | MS.gene074415:CDS |
| GAACTTCACGAGGCATTGGT+GGG | 0.560153 | 3.4:-75369751 | None:intergenic |
| TCCACAAATTCCTCCTGATA+GGG | 0.564310 | 3.4:+75370498 | MS.gene074415:CDS |
| GTTATCATAGAGATGACTGA+TGG | 0.568363 | 3.4:+75371628 | MS.gene074415:CDS |
| TTGATTTCTTAGGTTGCAGA+GGG | 0.573432 | 3.4:+75370903 | MS.gene074415:intron |
| AAACTGTAGCTGCTGTTGCA+AGG | 0.576786 | 3.4:+75369687 | MS.gene074415:intron |
| GGGTGGACAAGCCAGGAGCT+AGG | 0.580686 | 3.4:+75372032 | MS.gene074415:CDS |
| TTTGTTCATGGTGAGGAATG+TGG | 0.586966 | 3.4:+75371423 | MS.gene074415:CDS |
| AACTTCACGAGGCATTGGTG+GGG | 0.587358 | 3.4:-75369750 | None:intergenic |
| GGACAACCTATAAGATGCAA+AGG | 0.590172 | 3.4:+75369521 | MS.gene074415:CDS |
| CACAGACTTTGTTCATGGTG+AGG | 0.590684 | 3.4:+75371416 | MS.gene074415:CDS |
| CTAGTGAGGTCCTTCATGAT+GGG | 0.592056 | 3.4:+75372068 | MS.gene074415:CDS |
| TCTTCGATGTGTGATTTGGA+TGG | 0.597600 | 3.4:+75372401 | MS.gene074415:CDS |
| ATTGATTTCTTAGGTTGCAG+AGG | 0.599458 | 3.4:+75370902 | MS.gene074415:intron |
| ATGATGTCTTCTATAACCAA+TGG | 0.612545 | 3.4:-75369722 | None:intergenic |
| TAAGGCTCTTCCCATCATGA+AGG | 0.613165 | 3.4:-75372078 | None:intergenic |
| TGCTTGGAGAACAGCAGGTG+TGG | 0.624709 | 3.4:+75370744 | MS.gene074415:CDS |
| TGAATGGGAAATTAGTACAA+CGG | 0.629184 | 3.4:-75370339 | None:intergenic |
| TTGATACACCACAACCGAGA+AGG | 0.629956 | 3.4:-75370525 | None:intergenic |
| AGCAACTAGGATTATTGGTG+TGG | 0.636179 | 3.4:+75370941 | MS.gene074415:CDS |
| ATCATAGAGATGACTGATGG+AGG | 0.637658 | 3.4:+75371631 | MS.gene074415:CDS |
| ATACGAATCCGAACTTCACG+AGG | 0.640026 | 3.4:-75369761 | None:intergenic |
| ACTTAAACGTTACATGGACA+AGG | 0.641875 | 3.4:+75372150 | MS.gene074415:CDS |
| GAAGGACCTCACTAGAACTG+AGG | 0.642932 | 3.4:-75372060 | None:intergenic |
| CTTATGGGATCCACATATGG+AGG | 0.652537 | 3.4:+75372097 | MS.gene074415:CDS |
| AGAAGGCATGCCCTATCAGG+AGG | 0.658173 | 3.4:-75370508 | None:intergenic |
| AATATAGCAACTGTTGACCC+TGG | 0.658258 | 3.4:-75370769 | None:intergenic |
| GATAAGCCTCAGTTCTAGTG+AGG | 0.659475 | 3.4:+75372054 | MS.gene074415:CDS |
| TACACTCCTCACAATCTGGT+AGG | 0.669954 | 3.4:-75370291 | None:intergenic |
| AAGTTTCAGCGAGTATACCG+TGG | 0.679034 | 3.4:+75370447 | MS.gene074415:CDS |
| TTCCCATATCTAGGCAACCA+AGG | 0.683585 | 3.4:-75370370 | None:intergenic |
| TATATTGGCGATGTCAACCA+CGG | 0.699696 | 3.4:-75370464 | None:intergenic |
| GGTTATAGAAGACATCATTG+TGG | 0.707672 | 3.4:+75369727 | MS.gene074415:CDS |
| TCCAAAGAGTGACATCACTG+TGG | 0.771958 | 3.4:-75369802 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTCATTCAAAAATCAAA+AGG | - | chr3.4:75369914-75369933 | None:intergenic | 15.0% |
| !! | TTAAAACTTGTAAATTTGTA+GGG | + | chr3.4:75370713-75370732 | MS.gene074415:intron | 15.0% |
| !! | ATAAAATCAACCCTATAAAA+TGG | + | chr3.4:75370103-75370122 | MS.gene074415:intron | 20.0% |
| !! | GTATATCAAACTTTATGAAA+GGG | - | chr3.4:75371838-75371857 | None:intergenic | 20.0% |
| !! | GTTAAAACTTGTAAATTTGT+AGG | + | chr3.4:75370712-75370731 | MS.gene074415:intron | 20.0% |
| !! | TAAAACTTGTAAATTTGTAG+GGG | + | chr3.4:75370714-75370733 | MS.gene074415:intron | 20.0% |
| !! | TATAGATAAGAACAATATGA+CGG | + | chr3.4:75370587-75370606 | MS.gene074415:intron | 20.0% |
| !! | TGTTAAACTAAATCAAAATG+TGG | + | chr3.4:75371594-75371613 | MS.gene074415:intron | 20.0% |
| !! | TTAATATTGAAGTTTCAAGA+GGG | - | chr3.4:75371473-75371492 | None:intergenic | 20.0% |
| !!! | AACCATGAAAAATTTGAAAT+TGG | + | chr3.4:75370969-75370988 | MS.gene074415:CDS | 20.0% |
| !!! | TACCAATTTCAAATTTTTCA+TGG | - | chr3.4:75370974-75370993 | None:intergenic | 20.0% |
| !!! | TATTTTCATAACTTCTTCAT+AGG | + | chr3.4:75371220-75371239 | MS.gene074415:intron | 20.0% |
| !!! | TCTAAAACTTCAAATGATAA+TGG | - | chr3.4:75369629-75369648 | None:intergenic | 20.0% |
| !!! | TTAACTAAATTTTGCTTTCA+GGG | + | chr3.4:75371986-75372005 | MS.gene074415:intron | 20.0% |
| !!! | TTTGTGAAGTTTTACTTTAA+AGG | - | chr3.4:75371860-75371879 | None:intergenic | 20.0% |
| ! | AATTCTACTTAAACGTTACA+TGG | + | chr3.4:75372144-75372163 | MS.gene074415:CDS | 25.0% |
| ! | ACAAACAGGAACAAAAAAAA+TGG | - | chr3.4:75369871-75369890 | None:intergenic | 25.0% |
| ! | ACAACAAAATATTGGACTTA+AGG | - | chr3.4:75371029-75371048 | None:intergenic | 25.0% |
| ! | ACATGAAAGATCAAATGATT+TGG | + | chr3.4:75372247-75372266 | MS.gene074415:intron | 25.0% |
| ! | ACTGAAGTTAAGAAACATAT+AGG | - | chr3.4:75369574-75369593 | None:intergenic | 25.0% |
| ! | ATGAAAGATCAAATGATTTG+GGG | + | chr3.4:75372249-75372268 | MS.gene074415:intron | 25.0% |
| ! | ATGTAACGTTTAAGTAGAAT+TGG | - | chr3.4:75372145-75372164 | None:intergenic | 25.0% |
| ! | ATGTCCAAAAATGAAACAAA+AGG | - | chr3.4:75372190-75372209 | None:intergenic | 25.0% |
| ! | ATTTAATCAGGAAAGAAGTT+TGG | + | chr3.4:75371390-75371409 | MS.gene074415:intron | 25.0% |
| ! | CAACAAAATATTGGACTTAA+GGG | - | chr3.4:75371028-75371047 | None:intergenic | 25.0% |
| ! | CACTTATAGAAATTACAAAC+AGG | - | chr3.4:75369885-75369904 | None:intergenic | 25.0% |
| ! | CATGAAAGATCAAATGATTT+GGG | + | chr3.4:75372248-75372267 | MS.gene074415:intron | 25.0% |
| ! | CTAACACTTAACAAACAAAA+TGG | - | chr3.4:75371964-75371983 | None:intergenic | 25.0% |
| ! | GATCCATTATACATAATTCT+TGG | + | chr3.4:75369603-75369622 | MS.gene074415:intron | 25.0% |
| ! | GGTATATCAAACTTTATGAA+AGG | - | chr3.4:75371839-75371858 | None:intergenic | 25.0% |
| ! | GGTTAATATGTTTCAGTTAA+AGG | - | chr3.4:75371930-75371949 | None:intergenic | 25.0% |
| ! | GTCCTTCAAAACATATAAAA+GGG | - | chr3.4:75369945-75369964 | None:intergenic | 25.0% |
| ! | GTTAATATTGAAGTTTCAAG+AGG | - | chr3.4:75371474-75371493 | None:intergenic | 25.0% |
| ! | TGGATCAATCTTTAGTATAT+TGG | - | chr3.4:75370482-75370501 | None:intergenic | 25.0% |
| ! | TTCTTTCCTGATTAAATGAA+AGG | - | chr3.4:75371387-75371406 | None:intergenic | 25.0% |
| !! | AACAACCTTTCTTTTATTCA+TGG | - | chr3.4:75370636-75370655 | None:intergenic | 25.0% |
| !! | AACCAATTTTTATGTGATGT+AGG | + | chr3.4:75370203-75370222 | MS.gene074415:intron | 25.0% |
| !! | ACCAATTTTTATGTGATGTA+GGG | + | chr3.4:75370204-75370223 | MS.gene074415:intron | 25.0% |
| !! | CTTTTTCCTTTCATTTAATC+AGG | + | chr3.4:75371378-75371397 | MS.gene074415:intron | 25.0% |
| !! | GTTAACTAAATTTTGCTTTC+AGG | + | chr3.4:75371985-75372004 | MS.gene074415:intron | 25.0% |
| !! | TTGCAATTGATTGATTTCTT+AGG | + | chr3.4:75370893-75370912 | MS.gene074415:intron | 25.0% |
| !! | TTTCCAATGTGTTAAAGTTT+TGG | + | chr3.4:75372274-75372293 | MS.gene074415:intron | 25.0% |
| !!! | AAAAGGTATTATGGTACTAA+AGG | + | chr3.4:75371083-75371102 | MS.gene074415:intron | 25.0% |
| !!! | AAGACTTTGAAACATTGAAT+TGG | - | chr3.4:75370684-75370703 | None:intergenic | 25.0% |
| !!! | ACAGTTTTTTCAATGAAACA+AGG | - | chr3.4:75369674-75369693 | None:intergenic | 25.0% |
| !!! | AGTTCCTTTTGTTTCATTTT+TGG | + | chr3.4:75372183-75372202 | MS.gene074415:intron | 25.0% |
| !!! | ATAATACCTTTTTCTAGTGA+AGG | - | chr3.4:75371075-75371094 | None:intergenic | 25.0% |
| !!! | CAGTTTTTTCAATGAAACAA+GGG | - | chr3.4:75369673-75369692 | None:intergenic | 25.0% |
| !!! | GATTATTGTTTTGAATGTGT+TGG | + | chr3.4:75371658-75371677 | MS.gene074415:CDS | 25.0% |
| !!! | GCTTTTGATTTATTGAGTAA+AGG | + | chr3.4:75372372-75372391 | MS.gene074415:CDS | 25.0% |
| !!! | TAATACCTTTTTCTAGTGAA+GGG | - | chr3.4:75371074-75371093 | None:intergenic | 25.0% |
| !!! | TACCCTTTTATATGTTTTGA+AGG | + | chr3.4:75369940-75369959 | MS.gene074415:intron | 25.0% |
| !!! | TTCACTAGAAAAAGGTATTA+TGG | + | chr3.4:75371074-75371093 | MS.gene074415:intron | 25.0% |
| AAAATTCTTGGAAAAATGCC+AGG | - | chr3.4:75369971-75369990 | None:intergenic | 30.0% | |
| AAACTAGCAACAACAATTGA+AGG | + | chr3.4:75369491-75369510 | MS.gene074415:CDS | 30.0% | |
| ACAAATAATTGTTTCAGCCA+AGG | + | chr3.4:75371875-75371894 | MS.gene074415:intron | 30.0% | |
| ACAACAATTGAAGGAAAAGA+AGG | + | chr3.4:75369500-75369519 | MS.gene074415:CDS | 30.0% | |
| ACCCTACATCACATAAAAAT+TGG | - | chr3.4:75370208-75370227 | None:intergenic | 30.0% | |
| ACTAGATTCACTGACATAAA+CGG | + | chr3.4:75370394-75370413 | MS.gene074415:CDS | 30.0% | |
| AGAATTGGTACATGAGATTT+GGG | - | chr3.4:75372130-75372149 | None:intergenic | 30.0% | |
| ATGATGTCTTCTATAACCAA+TGG | - | chr3.4:75369725-75369744 | None:intergenic | 30.0% | |
| ATTGGCCATGAATAAAAGAA+AGG | + | chr3.4:75370628-75370647 | MS.gene074415:intron | 30.0% | |
| CAGTTAAAGGCAAATAGATT+AGG | - | chr3.4:75371917-75371936 | None:intergenic | 30.0% | |
| GATGTAACTGAAGTAACAAA+AGG | + | chr3.4:75370247-75370266 | MS.gene074415:CDS | 30.0% | |
| GGTCCTTCAAAACATATAAA+AGG | - | chr3.4:75369946-75369965 | None:intergenic | 30.0% | |
| GGTGGTTAACAACAAAATAT+TGG | - | chr3.4:75371037-75371056 | None:intergenic | 30.0% | |
| GTACAATTCACCTAATAGTT+AGG | - | chr3.4:75371312-75371331 | None:intergenic | 30.0% | |
| TAAATTTGTGACTCATGAGT+TGG | + | chr3.4:75372329-75372348 | MS.gene074415:CDS | 30.0% | |
| TACTTAATTAGACGAGCTTA+CGG | + | chr3.4:75371160-75371179 | MS.gene074415:intron | 30.0% | |
| TAGAATTGGTACATGAGATT+TGG | - | chr3.4:75372131-75372150 | None:intergenic | 30.0% | |
| TCCATTAGGGTCAAATTAAT+TGG | + | chr3.4:75370610-75370629 | MS.gene074415:intron | 30.0% | |
| TGAATGGGAAATTAGTACAA+CGG | - | chr3.4:75370342-75370361 | None:intergenic | 30.0% | |
| TGGCCAAGAATTATGTATAA+TGG | - | chr3.4:75369609-75369628 | None:intergenic | 30.0% | |
| ! | CAACGCAAATCCATTTTATA+GGG | - | chr3.4:75370116-75370135 | None:intergenic | 30.0% |
| ! | CTCAAATATTTAAGACCCAT+GGG | + | chr3.4:75370156-75370175 | MS.gene074415:intron | 30.0% |
| ! | GGCATTTTTCCAAGAATTTT+GGG | + | chr3.4:75369971-75369990 | MS.gene074415:CDS | 30.0% |
| ! | TAAATTTTGCTTTCAGGGTT+GGG | + | chr3.4:75371991-75372010 | MS.gene074415:intron | 30.0% |
| ! | TGGCATTTTTCCAAGAATTT+TGG | + | chr3.4:75369970-75369989 | MS.gene074415:CDS | 30.0% |
| ! | TGGGGAAAAACAATTGTTTT+AGG | + | chr3.4:75372010-75372029 | MS.gene074415:CDS | 30.0% |
| !! | GGGGAAAAACAATTGTTTTA+GGG | + | chr3.4:75372011-75372030 | MS.gene074415:CDS | 30.0% |
| !!! | AAAAACAATTGTTTTAGGGG+TGG | + | chr3.4:75372015-75372034 | MS.gene074415:CDS | 30.0% |
| !!! | GGGAAAAACAATTGTTTTAG+GGG | + | chr3.4:75372012-75372031 | MS.gene074415:CDS | 30.0% |
| AACAATATGACGGTCCATTA+GGG | + | chr3.4:75370597-75370616 | MS.gene074415:intron | 35.0% | |
| AACACTTCATTATCTTCCCA+TGG | - | chr3.4:75370175-75370194 | None:intergenic | 35.0% | |
| AACCAAGGAGAAACTTTGAA+TGG | - | chr3.4:75370358-75370377 | None:intergenic | 35.0% | |
| AATCTAGTGTTCCCATATCT+AGG | - | chr3.4:75370382-75370401 | None:intergenic | 35.0% | |
| ACACTTCATTATCTTCCCAT+GGG | - | chr3.4:75370174-75370193 | None:intergenic | 35.0% | |
| ACCAAGGAGAAACTTTGAAT+GGG | - | chr3.4:75370357-75370376 | None:intergenic | 35.0% | |
| ACTTAAACGTTACATGGACA+AGG | + | chr3.4:75372150-75372169 | MS.gene074415:CDS | 35.0% | |
| ACTTGTAAATTTGTAGGGGT+AGG | + | chr3.4:75370718-75370737 | MS.gene074415:intron | 35.0% | |
| ACTTGTTTGAGCTTATCTAG+TGG | + | chr3.4:75371119-75371138 | MS.gene074415:intron | 35.0% | |
| AGCATATGCTTCTTGTAGAA+AGG | + | chr3.4:75371702-75371721 | MS.gene074415:CDS | 35.0% | |
| ATATTGAAGTTTCAAGAGGG+TGG | - | chr3.4:75371470-75371489 | None:intergenic | 35.0% | |
| CAGAACAGATCCTAACTATT+AGG | + | chr3.4:75371299-75371318 | MS.gene074415:intron | 35.0% | |
| GAGCATGTAGAAGAACTTAA+TGG | - | chr3.4:75370139-75370158 | None:intergenic | 35.0% | |
| GAGCCAAAACTTTAACACAT+TGG | - | chr3.4:75372280-75372299 | None:intergenic | 35.0% | |
| GGTCAACAGTTGCTATATTT+GGG | + | chr3.4:75370773-75370792 | MS.gene074415:CDS | 35.0% | |
| GGTTATAGAAGACATCATTG+TGG | + | chr3.4:75369727-75369746 | MS.gene074415:CDS | 35.0% | |
| GTTATCATAGAGATGACTGA+TGG | + | chr3.4:75371628-75371647 | MS.gene074415:CDS | 35.0% | |
| TCACAATCTGGTAGGAAAAT+TGG | - | chr3.4:75370286-75370305 | None:intergenic | 35.0% | |
| TGTCTCTATATGACAGTGTA+AGG | - | chr3.4:75371763-75371782 | None:intergenic | 35.0% | |
| ! | AAATTTTGCTTTCAGGGTTG+GGG | + | chr3.4:75371992-75372011 | MS.gene074415:intron | 35.0% |
| ! | AATTTTCCTACCAGATTGTG+AGG | + | chr3.4:75370285-75370304 | MS.gene074415:CDS | 35.0% |
| ! | ATGTGTTGGTATGACATCAT+TGG | + | chr3.4:75371672-75371691 | MS.gene074415:CDS | 35.0% |
| ! | ATTGATTTCTTAGGTTGCAG+AGG | + | chr3.4:75370902-75370921 | MS.gene074415:intron | 35.0% |
| ! | CTAAATTTTGCTTTCAGGGT+TGG | + | chr3.4:75371990-75372009 | MS.gene074415:intron | 35.0% |
| ! | GCAACGCAAATCCATTTTAT+AGG | - | chr3.4:75370117-75370136 | None:intergenic | 35.0% |
| ! | GCCAATTAATTTGACCCTAA+TGG | - | chr3.4:75370614-75370633 | None:intergenic | 35.0% |
| ! | GCTCAAATATTTAAGACCCA+TGG | + | chr3.4:75370155-75370174 | MS.gene074415:intron | 35.0% |
| ! | TTGATTTCTTAGGTTGCAGA+GGG | + | chr3.4:75370903-75370922 | MS.gene074415:intron | 35.0% |
| ! | TTTTATGTGATGTAGGGTTG+TGG | + | chr3.4:75370210-75370229 | MS.gene074415:intron | 35.0% |
| !! | ATTGGACTTAAGGGTTGATA+TGG | - | chr3.4:75371019-75371038 | None:intergenic | 35.0% |
| AACAAAATGGTCGAAGCAAG+TGG | - | chr3.4:75371951-75371970 | None:intergenic | 40.0% | |
| AATATAGCAACTGTTGACCC+TGG | - | chr3.4:75370772-75370791 | None:intergenic | 40.0% | |
| ACAGTGTAAGGATGTGTGTT+TGG | - | chr3.4:75371751-75371770 | None:intergenic | 40.0% | |
| ACAGTTGCTATATTTGGGCT+TGG | + | chr3.4:75370778-75370797 | MS.gene074415:CDS | 40.0% | |
| AGCAACTAGGATTATTGGTG+TGG | + | chr3.4:75370941-75370960 | MS.gene074415:CDS | 40.0% | |
| AGCAGACCTTTGCATCTTAT+AGG | - | chr3.4:75369530-75369549 | None:intergenic | 40.0% | |
| AGTGTCTTCGATGTGTGATT+TGG | + | chr3.4:75372397-75372416 | MS.gene074415:CDS | 40.0% | |
| ATATTTGGGCTTGGATCTGT+TGG | + | chr3.4:75370787-75370806 | MS.gene074415:CDS | 40.0% | |
| ATCATAGAGATGACTGATGG+AGG | + | chr3.4:75371631-75371650 | MS.gene074415:CDS | 40.0% | |
| ATCCACAAATTCCTCCTGAT+AGG | + | chr3.4:75370497-75370516 | MS.gene074415:CDS | 40.0% | |
| ATTAGTACAACGGTTGCTCT+TGG | - | chr3.4:75370332-75370351 | None:intergenic | 40.0% | |
| ATTCTTGGAAAAATGCCAGG+AGG | - | chr3.4:75369968-75369987 | None:intergenic | 40.0% | |
| CAAAGCCCTTCACTAGAAAA+AGG | + | chr3.4:75371066-75371085 | MS.gene074415:intron | 40.0% | |
| GAACAATATGACGGTCCATT+AGG | + | chr3.4:75370596-75370615 | MS.gene074415:intron | 40.0% | |
| GGACAACCTATAAGATGCAA+AGG | + | chr3.4:75369521-75369540 | MS.gene074415:CDS | 40.0% | |
| GGGTCAACAGTTGCTATATT+TGG | + | chr3.4:75370772-75370791 | MS.gene074415:CDS | 40.0% | |
| TATATTGGCGATGTCAACCA+CGG | - | chr3.4:75370467-75370486 | None:intergenic | 40.0% | |
| TCCACAAATTCCTCCTGATA+GGG | + | chr3.4:75370498-75370517 | MS.gene074415:CDS | 40.0% | |
| TCCCATTCAAAGTTTCTCCT+TGG | + | chr3.4:75370353-75370372 | MS.gene074415:CDS | 40.0% | |
| TCTATACACTCCTCACAATC+TGG | - | chr3.4:75370298-75370317 | None:intergenic | 40.0% | |
| TGTGGAGCAACTAGGATTAT+TGG | + | chr3.4:75370936-75370955 | MS.gene074415:CDS | 40.0% | |
| TTAACTGCAGGAACTGCAAT+TGG | + | chr3.4:75372305-75372324 | MS.gene074415:intron | 40.0% | |
| TTCTTGCATAATAGCCTCAG+AGG | - | chr3.4:75371337-75371356 | None:intergenic | 40.0% | |
| TTCTTGGAAAAATGCCAGGA+GGG | - | chr3.4:75369967-75369986 | None:intergenic | 40.0% | |
| TTTGTTCATGGTGAGGAATG+TGG | + | chr3.4:75371423-75371442 | MS.gene074415:CDS | 40.0% | |
| ! | GACTCATGAGTTGGAGTTTA+AGG | + | chr3.4:75372338-75372357 | MS.gene074415:CDS | 40.0% |
| ! | GTACGTTTGAGTTTGATCCT+TGG | - | chr3.4:75371895-75371914 | None:intergenic | 40.0% |
| ! | TCTTCGATGTGTGATTTGGA+TGG | + | chr3.4:75372401-75372420 | MS.gene074415:CDS | 40.0% |
| ! | TTGGCTCATTGATTAACTGC+AGG | + | chr3.4:75372293-75372312 | MS.gene074415:intron | 40.0% |
| !! | TCCAAGAATTTTGGGTCATG+AGG | + | chr3.4:75369979-75369998 | MS.gene074415:CDS | 40.0% |
| !! | TGAAGGGCTTTGAAACATGA+GGG | - | chr3.4:75371058-75371077 | None:intergenic | 40.0% |
| AAACTGTAGCTGCTGTTGCA+AGG | + | chr3.4:75369687-75369706 | MS.gene074415:intron | 45.0% | |
| AAGTTTCAGCGAGTATACCG+TGG | + | chr3.4:75370447-75370466 | MS.gene074415:CDS | 45.0% | |
| ATACGAATCCGAACTTCACG+AGG | - | chr3.4:75369764-75369783 | None:intergenic | 45.0% | |
| CACAGACTTTGTTCATGGTG+AGG | + | chr3.4:75371416-75371435 | MS.gene074415:CDS | 45.0% | |
| CTAGACTTTGTGGAGCAACT+AGG | + | chr3.4:75370928-75370947 | MS.gene074415:CDS | 45.0% | |
| CTAGTGAGGTCCTTCATGAT+GGG | + | chr3.4:75372068-75372087 | MS.gene074415:CDS | 45.0% | |
| CTCCATATGTGGATCCCATA+AGG | - | chr3.4:75372099-75372118 | None:intergenic | 45.0% | |
| CTCCTTGGTTGCCTAGATAT+GGG | + | chr3.4:75370368-75370387 | MS.gene074415:CDS | 45.0% | |
| CTTATGGGATCCACATATGG+AGG | + | chr3.4:75372097-75372116 | MS.gene074415:CDS | 45.0% | |
| GCCTCATGACCCAAAATTCT+TGG | - | chr3.4:75369983-75370002 | None:intergenic | 45.0% | |
| GGACTCACAGACTTTGTTCA+TGG | + | chr3.4:75371411-75371430 | MS.gene074415:CDS | 45.0% | |
| TAAGGCTCTTCCCATCATGA+AGG | - | chr3.4:75372081-75372100 | None:intergenic | 45.0% | |
| TACACTCCTCACAATCTGGT+AGG | - | chr3.4:75370294-75370313 | None:intergenic | 45.0% | |
| TCAAAATGTGGTTGCTGAGC+AGG | + | chr3.4:75371606-75371625 | MS.gene074415:intron | 45.0% | |
| TCCAAAGAGTGACATCACTG+TGG | - | chr3.4:75369805-75369824 | None:intergenic | 45.0% | |
| TCTAGTGAGGTCCTTCATGA+TGG | + | chr3.4:75372067-75372086 | MS.gene074415:CDS | 45.0% | |
| TCTATAACCAATGGCTCACC+AGG | - | chr3.4:75369716-75369735 | None:intergenic | 45.0% | |
| TCTCCTTGGTTGCCTAGATA+TGG | + | chr3.4:75370367-75370386 | MS.gene074415:CDS | 45.0% | |
| TCTGAGTCTGCGACTCTTTA+TGG | + | chr3.4:75370847-75370866 | MS.gene074415:intron | 45.0% | |
| TGGAAACAAATCTGTGAGCC+AGG | + | chr3.4:75371443-75371462 | MS.gene074415:CDS | 45.0% | |
| TTCCCATATCTAGGCAACCA+AGG | - | chr3.4:75370373-75370392 | None:intergenic | 45.0% | |
| TTGATACACCACAACCGAGA+AGG | - | chr3.4:75370528-75370547 | None:intergenic | 45.0% | |
| TTGCATAATAGCCTCAGAGG+TGG | - | chr3.4:75371334-75371353 | None:intergenic | 45.0% | |
| ! | AGCCTTATGGGATCCACATA+TGG | + | chr3.4:75372094-75372113 | MS.gene074415:CDS | 45.0% |
| ! | CATGATGGGAAGAGCCTTAT+GGG | + | chr3.4:75372082-75372101 | MS.gene074415:CDS | 45.0% |
| ! | GATAAGCCTCAGTTCTAGTG+AGG | + | chr3.4:75372054-75372073 | MS.gene074415:CDS | 45.0% |
| ! | GCTTGGATCTGTTGGATTAG+CGG | + | chr3.4:75370795-75370814 | MS.gene074415:CDS | 45.0% |
| ! | TCATGATGGGAAGAGCCTTA+TGG | + | chr3.4:75372081-75372100 | MS.gene074415:CDS | 45.0% |
| ! | TGTCACTCTTTGGAAGATGC+AGG | + | chr3.4:75369811-75369830 | MS.gene074415:CDS | 45.0% |
| !! | ATTTTGGGTCATGAGGCAAC+TGG | + | chr3.4:75369986-75370005 | MS.gene074415:CDS | 45.0% |
| !! | GATCTGTTGGATTAGCGGTA+TGG | + | chr3.4:75370800-75370819 | MS.gene074415:intron | 45.0% |
| !! | GTGAAGGGCTTTGAAACATG+AGG | - | chr3.4:75371059-75371078 | None:intergenic | 45.0% |
| !! | TTTTGGGTCATGAGGCAACT+GGG | + | chr3.4:75369987-75370006 | MS.gene074415:CDS | 45.0% |
| !!! | TATGTTTTGAAGGACCCTCC+TGG | + | chr3.4:75369950-75369969 | MS.gene074415:intron | 45.0% |
| AAGGAAACCTGGTGAGCCAT+TGG | + | chr3.4:75369706-75369725 | MS.gene074415:CDS | 50.0% | |
| AAGTTTCAAGAGGGTGGACC+TGG | - | chr3.4:75371464-75371483 | None:intergenic | 50.0% | |
| ATCCGAACTTCACGAGGCAT+TGG | - | chr3.4:75369758-75369777 | None:intergenic | 50.0% | |
| CACCAATGCCTCGTGAAGTT+CGG | + | chr3.4:75369753-75369772 | MS.gene074415:CDS | 50.0% | |
| CTCGGTTGTGGTGTATCAAC+AGG | + | chr3.4:75370529-75370548 | MS.gene074415:CDS | 50.0% | |
| GAAGGACCTCACTAGAACTG+AGG | - | chr3.4:75372063-75372082 | None:intergenic | 50.0% | |
| GCCACAGTGATGTCACTCTT+TGG | + | chr3.4:75369801-75369820 | MS.gene074415:CDS | 50.0% | |
| GCCCTATCAGGAGGAATTTG+TGG | - | chr3.4:75370502-75370521 | None:intergenic | 50.0% | |
| GGGTTTGAGTCCTCCATATG+TGG | - | chr3.4:75372110-75372129 | None:intergenic | 50.0% | |
| GGTGAATTGTACCACCTCTG+AGG | + | chr3.4:75371320-75371339 | MS.gene074415:intron | 50.0% | |
| ! | GTAGGGTTGTGGAAAGCGTA+GGG | + | chr3.4:75370221-75370240 | MS.gene074415:intron | 50.0% |
| ! | TGTAGGGTTGTGGAAAGCGT+AGG | + | chr3.4:75370220-75370239 | MS.gene074415:intron | 50.0% |
| !! | AACTTCACGAGGCATTGGTG+GGG | - | chr3.4:75369753-75369772 | None:intergenic | 50.0% |
| !! | AGGGCTTTGAAACATGAGGG+TGG | - | chr3.4:75371055-75371074 | None:intergenic | 50.0% |
| !! | GAACTTCACGAGGCATTGGT+GGG | - | chr3.4:75369754-75369773 | None:intergenic | 50.0% |
| CCTGATAGGGCATGCCTTCT+CGG | + | chr3.4:75370511-75370530 | MS.gene074415:CDS | 55.0% | |
| CTGAGGCTTATCCTAGCTCC+TGG | - | chr3.4:75372046-75372065 | None:intergenic | 55.0% | |
| GCAGAGGGAGCTAGACTTTG+TGG | + | chr3.4:75370918-75370937 | MS.gene074415:CDS | 55.0% | |
| GCTGCTGTTGCAAGGAAACC+TGG | + | chr3.4:75369695-75369714 | MS.gene074415:intron | 55.0% | |
| TGCTTGGAGAACAGCAGGTG+TGG | + | chr3.4:75370744-75370763 | MS.gene074415:CDS | 55.0% | |
| ! | AGAAGGCATGCCCTATCAGG+AGG | - | chr3.4:75370511-75370530 | None:intergenic | 55.0% |
| ! | GGTTGTGGAAAGCGTAGGGA+AGG | + | chr3.4:75370225-75370244 | MS.gene074415:CDS | 55.0% |
| !! | CGAACTTCACGAGGCATTGG+TGG | - | chr3.4:75369755-75369774 | None:intergenic | 55.0% |
| !! | TTGTAGGGGTAGGTGCTGCT+TGG | + | chr3.4:75370728-75370747 | MS.gene074415:intron | 55.0% |
| !!! | GTTTTAGGGGTGGACAAGCC+AGG | + | chr3.4:75372025-75372044 | MS.gene074415:CDS | 55.0% |
| AGAACAGCAGGTGTGGAGCC+AGG | + | chr3.4:75370751-75370770 | MS.gene074415:CDS | 60.0% | |
| AGGGCATGCCTTCTCGGTTG+TGG | + | chr3.4:75370517-75370536 | MS.gene074415:CDS | 60.0% | |
| GAACAGCAGGTGTGGAGCCA+GGG | + | chr3.4:75370752-75370771 | MS.gene074415:CDS | 60.0% | |
| ! | CCGAGAAGGCATGCCCTATC+AGG | - | chr3.4:75370514-75370533 | None:intergenic | 60.0% |
| !! | GGTGCTGCTTGGAGAACAGC+AGG | + | chr3.4:75370739-75370758 | MS.gene074415:CDS | 60.0% |
| GGGTGGACAAGCCAGGAGCT+AGG | + | chr3.4:75372032-75372051 | MS.gene074415:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 75369476 | 75372431 | 75369476 | ID=MS.gene074415 |
| chr3.4 | mRNA | 75369476 | 75372431 | 75369476 | ID=MS.gene074415.t1;Parent=MS.gene074415 |
| chr3.4 | exon | 75369476 | 75369542 | 75369476 | ID=MS.gene074415.t1.exon1;Parent=MS.gene074415.t1 |
| chr3.4 | CDS | 75369476 | 75369542 | 75369476 | ID=cds.MS.gene074415.t1;Parent=MS.gene074415.t1 |
| chr3.4 | exon | 75369696 | 75369832 | 75369696 | ID=MS.gene074415.t1.exon2;Parent=MS.gene074415.t1 |
| chr3.4 | CDS | 75369696 | 75369832 | 75369696 | ID=cds.MS.gene074415.t1;Parent=MS.gene074415.t1 |
| chr3.4 | exon | 75369962 | 75370008 | 75369962 | ID=MS.gene074415.t1.exon3;Parent=MS.gene074415.t1 |
| chr3.4 | CDS | 75369962 | 75370008 | 75369962 | ID=cds.MS.gene074415.t1;Parent=MS.gene074415.t1 |
| chr3.4 | exon | 75370225 | 75370550 | 75370225 | ID=MS.gene074415.t1.exon4;Parent=MS.gene074415.t1 |
| chr3.4 | CDS | 75370225 | 75370550 | 75370225 | ID=cds.MS.gene074415.t1;Parent=MS.gene074415.t1 |
| chr3.4 | exon | 75370734 | 75370816 | 75370734 | ID=MS.gene074415.t1.exon5;Parent=MS.gene074415.t1 |
| chr3.4 | CDS | 75370734 | 75370816 | 75370734 | ID=cds.MS.gene074415.t1;Parent=MS.gene074415.t1 |
| chr3.4 | exon | 75370915 | 75370990 | 75370915 | ID=MS.gene074415.t1.exon6;Parent=MS.gene074415.t1 |
| chr3.4 | CDS | 75370915 | 75370990 | 75370915 | ID=cds.MS.gene074415.t1;Parent=MS.gene074415.t1 |
| chr3.4 | exon | 75371400 | 75371464 | 75371400 | ID=MS.gene074415.t1.exon7;Parent=MS.gene074415.t1 |
| chr3.4 | CDS | 75371400 | 75371464 | 75371400 | ID=cds.MS.gene074415.t1;Parent=MS.gene074415.t1 |
| chr3.4 | exon | 75371628 | 75371723 | 75371628 | ID=MS.gene074415.t1.exon8;Parent=MS.gene074415.t1 |
| chr3.4 | CDS | 75371628 | 75371723 | 75371628 | ID=cds.MS.gene074415.t1;Parent=MS.gene074415.t1 |
| chr3.4 | exon | 75372007 | 75372171 | 75372007 | ID=MS.gene074415.t1.exon9;Parent=MS.gene074415.t1 |
| chr3.4 | CDS | 75372007 | 75372171 | 75372007 | ID=cds.MS.gene074415.t1;Parent=MS.gene074415.t1 |
| chr3.4 | exon | 75372315 | 75372431 | 75372315 | ID=MS.gene074415.t1.exon10;Parent=MS.gene074415.t1 |
| chr3.4 | CDS | 75372315 | 75372431 | 75372315 | ID=cds.MS.gene074415.t1;Parent=MS.gene074415.t1 |
| Gene Sequence |
| Protein sequence |
