Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08498.t1 | KEH18547.1 | 96.2 | 240 | 9 | 0 | 1 | 240 | 1 | 240 | 8.20E-122 | 446.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08498.t1 | A0A072TMA7 | 96.2 | 240 | 9 | 0 | 1 | 240 | 1 | 240 | 5.9e-122 | 446.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene98177 | MS.gene08498 | PPI |
| MS.gene79714 | MS.gene08498 | PPI |
| MS.gene08498 | MS.gene81078 | PPI |
| MS.gene59614 | MS.gene08498 | PPI |
| MS.gene08498 | MS.gene92136 | PPI |
| MS.gene08498 | MS.gene81077 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08498.t1 | MTR_8g023960 | 96.250 | 240 | 9 | 0 | 1 | 240 | 57 | 296 | 5.30e-169 | 468 |
| MS.gene08498.t1 | MTR_8g023960 | 96.250 | 240 | 9 | 0 | 1 | 240 | 1 | 240 | 1.34e-168 | 464 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08498.t1 | AT4G05400 | 56.126 | 253 | 95 | 5 | 1 | 240 | 1 | 250 | 1.23e-85 | 255 |
| MS.gene08498.t1 | AT4G05400 | 56.126 | 253 | 95 | 5 | 1 | 240 | 1 | 250 | 1.23e-85 | 255 |
| MS.gene08498.t1 | AT4G05400 | 56.126 | 253 | 95 | 5 | 1 | 240 | 1 | 250 | 1.23e-85 | 255 |
| MS.gene08498.t1 | AT4G21140 | 53.878 | 245 | 106 | 5 | 1 | 240 | 1 | 243 | 3.34e-72 | 220 |
Find 78 sgRNAs with CRISPR-Local
Find 98 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTTCCGGTGAATATGTTTA+TGG | 0.209095 | 8.2:+71989572 | MS.gene08498:CDS |
| TTTCTCAGAAACCCTAAATT+TGG | 0.213177 | 8.2:-71989301 | None:intergenic |
| AGCTTCCCGTGCGCGTTGTT+TGG | 0.253091 | 8.2:-71989208 | None:intergenic |
| TTCTGAGAAACCAACGATAA+TGG | 0.292493 | 8.2:+71989314 | MS.gene08498:CDS |
| TCCGGTTGGGGCTCCAGGTG+TGG | 0.303320 | 8.2:-71989109 | None:intergenic |
| GTTTCTCGCGGGATCCGGTT+GGG | 0.334744 | 8.2:-71989122 | None:intergenic |
| CGGGATCCGGTTGGGGCTCC+AGG | 0.338808 | 8.2:-71989114 | None:intergenic |
| GCTTCCCGTGCGCGTTGTTT+GGG | 0.343871 | 8.2:-71989207 | None:intergenic |
| CAATTTCATCCCATCTTCCT+TGG | 0.346124 | 8.2:-71989406 | None:intergenic |
| GGGTTGGATTATATCACGTT+AGG | 0.360005 | 8.2:+71989345 | MS.gene08498:CDS |
| GGGTTTGAAGGAAGCTGCTT+TGG | 0.367116 | 8.2:+71989533 | MS.gene08498:CDS |
| CAAGGAAGATGGGATGAAAT+TGG | 0.370390 | 8.2:+71989407 | MS.gene08498:CDS |
| TCAGTGGGAAGGAGAAGATT+AGG | 0.382186 | 8.2:+71989655 | MS.gene08498:CDS |
| TGGGGCTCCAGGTGTGGGTT+CGG | 0.385988 | 8.2:-71989103 | None:intergenic |
| TTATATCACGTTAGGGTTAG+TGG | 0.395935 | 8.2:+71989353 | MS.gene08498:CDS |
| TCCTTTGGCGGTGCGGCTGA+CGG | 0.396279 | 8.2:-71989022 | None:intergenic |
| TTCTTGTTTCTCGCGGGATC+CGG | 0.402017 | 8.2:-71989127 | None:intergenic |
| GAGGCTATTGAAGCTTTGCC+TGG | 0.402944 | 8.2:+71989510 | MS.gene08498:CDS |
| TCTGAGAAACCAACGATAAT+GGG | 0.408601 | 8.2:+71989315 | MS.gene08498:CDS |
| TTTCTCGCGGGATCCGGTTG+GGG | 0.418787 | 8.2:-71989121 | None:intergenic |
| AATTGGCCAAGGAGTATAGT+AGG | 0.424942 | 8.2:+71989424 | MS.gene08498:CDS |
| ACGCTTACGCCGCCTATTGA+TGG | 0.425057 | 8.2:+71989597 | MS.gene08498:CDS |
| TCCAGGTGTGGGTTCGGACC+CGG | 0.427457 | 8.2:-71989097 | None:intergenic |
| AGCCGCACCGCCAAAGGAAA+AGG | 0.428181 | 8.2:+71989027 | MS.gene08498:CDS |
| CCGGTTGGGGCTCCAGGTGT+GGG | 0.437586 | 8.2:-71989108 | None:intergenic |
| ATAAACATATTCACCGGAAA+CGG | 0.439011 | 8.2:-71989570 | None:intergenic |
| CCCACACCTGGAGCCCCAAC+CGG | 0.442696 | 8.2:+71989108 | MS.gene08498:CDS |
| TGGGTATATTGAGAAGATTA+AGG | 0.447659 | 8.2:+71989617 | MS.gene08498:CDS |
| CGGAGCAGCGTTGGAGGAGT+TGG | 0.459479 | 8.2:-71989002 | None:intergenic |
| ACCGGGTCCGAACCCACACC+TGG | 0.460493 | 8.2:+71989096 | MS.gene08498:CDS |
| TGCGGCTGACGGAGCAGCGT+TGG | 0.460867 | 8.2:-71989011 | None:intergenic |
| AGATTAAGGAGGCTGCTGAT+AGG | 0.463125 | 8.2:+71989631 | MS.gene08498:CDS |
| ACCGGAAACGGCGTAAAATC+CGG | 0.463153 | 8.2:-71989558 | None:intergenic |
| TTCTCAATATACCCATCAAT+AGG | 0.469115 | 8.2:-71989609 | None:intergenic |
| TGTTTCTCGCGGGATCCGGT+TGG | 0.471217 | 8.2:-71989123 | None:intergenic |
| GAAGGAAGCTGCTTTGGTGC+CGG | 0.473891 | 8.2:+71989539 | MS.gene08498:CDS |
| GGTTGGATTATATCACGTTA+GGG | 0.480423 | 8.2:+71989346 | MS.gene08498:CDS |
| TATGAATTGACCAAGGAAGA+TGG | 0.480864 | 8.2:+71989396 | MS.gene08498:CDS |
| TCCTTGGTCAATTCATACTT+AGG | 0.481057 | 8.2:-71989390 | None:intergenic |
| CCAACGATAATGGGAACCCC+TGG | 0.483698 | 8.2:+71989324 | MS.gene08498:CDS |
| GGCTGACGGAGCAGCGTTGG+AGG | 0.488541 | 8.2:-71989008 | None:intergenic |
| GGCTATTGAAGCTTTGCCTG+GGG | 0.503885 | 8.2:+71989512 | MS.gene08498:CDS |
| TTGAGAAAACGAAGCGGTGT+TGG | 0.505889 | 8.2:-71989183 | None:intergenic |
| CCAGGGGTTCCCATTATCGT+TGG | 0.516292 | 8.2:-71989324 | None:intergenic |
| CGCTTACGCCGCCTATTGAT+GGG | 0.516719 | 8.2:+71989598 | MS.gene08498:CDS |
| GCCAAAGGAAAAGGAAAAGC+TGG | 0.521189 | 8.2:+71989036 | MS.gene08498:CDS |
| TCCGTCAGCCGCACCGCCAA+AGG | 0.523259 | 8.2:+71989021 | MS.gene08498:CDS |
| ATGAATTGACCAAGGAAGAT+GGG | 0.528617 | 8.2:+71989397 | MS.gene08498:CDS |
| TTCGCGTTCTTGTTTCTCGC+GGG | 0.529856 | 8.2:-71989133 | None:intergenic |
| AGGCTATTGAAGCTTTGCCT+GGG | 0.539955 | 8.2:+71989511 | MS.gene08498:CDS |
| TAGCTTTGTGAGACGGAGCA+TGG | 0.544288 | 8.2:-71988956 | None:intergenic |
| CAAAACCCTACTATACTCCT+TGG | 0.553845 | 8.2:-71989430 | None:intergenic |
| GTTCGCGTTCTTGTTTCTCG+CGG | 0.563462 | 8.2:-71989134 | None:intergenic |
| GATAATGGGAACCCCTGGGT+TGG | 0.575407 | 8.2:+71989329 | MS.gene08498:CDS |
| ATTGGCCAAGGAGTATAGTA+GGG | 0.576553 | 8.2:+71989425 | MS.gene08498:CDS |
| TCAAACCCAAACAACGCGCA+CGG | 0.580702 | 8.2:+71989202 | MS.gene08498:CDS |
| CAAACCCAAACAACGCGCAC+GGG | 0.595471 | 8.2:+71989203 | MS.gene08498:CDS |
| GAAGCATAGGGCGAGACAAG+CGG | 0.597439 | 8.2:+71989458 | MS.gene08498:CDS |
| GCTATTGAAGCTTTGCCTGG+GGG | 0.597757 | 8.2:+71989513 | MS.gene08498:CDS |
| TGCTGATAGGATCAGTGGGA+AGG | 0.607298 | 8.2:+71989644 | MS.gene08498:CDS |
| CATTGAGGCATTGTTCGTAG+AGG | 0.608165 | 8.2:-71989158 | None:intergenic |
| GAGGCTGCTGATAGGATCAG+TGG | 0.610487 | 8.2:+71989639 | MS.gene08498:CDS |
| AGATGGGATGAAATTGGCCA+AGG | 0.616560 | 8.2:+71989413 | MS.gene08498:CDS |
| AACGTGATATAATCCAACCC+AGG | 0.616818 | 8.2:-71989342 | None:intergenic |
| ACGTGATATAATCCAACCCA+GGG | 0.616998 | 8.2:-71989341 | None:intergenic |
| CAACGATAATGGGAACCCCT+GGG | 0.617131 | 8.2:+71989325 | MS.gene08498:CDS |
| AGGCTGCTGATAGGATCAGT+GGG | 0.618985 | 8.2:+71989640 | MS.gene08498:CDS |
| GAAGCGGTGTTGGTGCATTG+AGG | 0.621239 | 8.2:-71989173 | None:intergenic |
| GTTGCCATAAACATATTCAC+CGG | 0.628444 | 8.2:-71989576 | None:intergenic |
| CAGCGTTGGAGGAGTTGGTG+CGG | 0.641635 | 8.2:-71988997 | None:intergenic |
| AGTTGGTGCGGTGAAGATGA+CGG | 0.654761 | 8.2:-71988985 | None:intergenic |
| GCATAGGGCGAGACAAGCGG+CGG | 0.658080 | 8.2:+71989461 | MS.gene08498:CDS |
| GCCTAAGTATGAATTGACCA+AGG | 0.667630 | 8.2:+71989389 | MS.gene08498:CDS |
| TCAATATACCCATCAATAGG+CGG | 0.683015 | 8.2:-71989606 | None:intergenic |
| GTATATTGAGAAGATTAAGG+AGG | 0.685736 | 8.2:+71989620 | MS.gene08498:CDS |
| TGGTGCGGTGAAGATGACGG+TGG | 0.737129 | 8.2:-71988982 | None:intergenic |
| TTGGGTTTGAGAAAACGAAG+CGG | 0.742669 | 8.2:-71989189 | None:intergenic |
| CGTGATATAATCCAACCCAG+GGG | 0.794978 | 8.2:-71989340 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATCACAGTAAAAAAAAC+CGG | + | chr8.2:71989078-71989097 | MS.gene08498:CDS | 20.0% |
| ! | AAATCACAGTAAAAAAAACC+GGG | + | chr8.2:71989079-71989098 | MS.gene08498:CDS | 25.0% |
| !!! | GGTTTTTTTTACTGTGATTT+TGG | - | chr8.2:71989079-71989098 | None:intergenic | 25.0% |
| AAGCTGAACGAGAAAAATTA+GGG | + | chr8.2:71989226-71989245 | MS.gene08498:CDS | 30.0% | |
| AGAAGAAAAACGCCAAATTT+AGG | + | chr8.2:71989289-71989308 | MS.gene08498:CDS | 30.0% | |
| ATAAACATATTCACCGGAAA+CGG | - | chr8.2:71989573-71989592 | None:intergenic | 30.0% | |
| GAAGAAAAACGCCAAATTTA+GGG | + | chr8.2:71989290-71989309 | MS.gene08498:CDS | 30.0% | |
| GTATATTGAGAAGATTAAGG+AGG | + | chr8.2:71989620-71989639 | MS.gene08498:CDS | 30.0% | |
| TGGGTATATTGAGAAGATTA+AGG | + | chr8.2:71989617-71989636 | MS.gene08498:CDS | 30.0% | |
| TTCTCAATATACCCATCAAT+AGG | - | chr8.2:71989612-71989631 | None:intergenic | 30.0% | |
| TTTCTCAGAAACCCTAAATT+TGG | - | chr8.2:71989304-71989323 | None:intergenic | 30.0% | |
| !! | GAATCTTTTGAGGATGAAAA+AGG | + | chr8.2:71989488-71989507 | MS.gene08498:CDS | 30.0% |
| ATGAATTGACCAAGGAAGAT+GGG | + | chr8.2:71989397-71989416 | MS.gene08498:CDS | 35.0% | |
| GAAGCTGAACGAGAAAAATT+AGG | + | chr8.2:71989225-71989244 | MS.gene08498:CDS | 35.0% | |
| GGTTGGATTATATCACGTTA+GGG | + | chr8.2:71989346-71989365 | MS.gene08498:CDS | 35.0% | |
| GTTGCCATAAACATATTCAC+CGG | - | chr8.2:71989579-71989598 | None:intergenic | 35.0% | |
| GTTTCCGGTGAATATGTTTA+TGG | + | chr8.2:71989572-71989591 | MS.gene08498:CDS | 35.0% | |
| TATGAATTGACCAAGGAAGA+TGG | + | chr8.2:71989396-71989415 | MS.gene08498:CDS | 35.0% | |
| TCAATATACCCATCAATAGG+CGG | - | chr8.2:71989609-71989628 | None:intergenic | 35.0% | |
| TCCTTGGTCAATTCATACTT+AGG | - | chr8.2:71989393-71989412 | None:intergenic | 35.0% | |
| TCTGAGAAACCAACGATAAT+GGG | + | chr8.2:71989315-71989334 | MS.gene08498:CDS | 35.0% | |
| TTATATCACGTTAGGGTTAG+TGG | + | chr8.2:71989353-71989372 | MS.gene08498:CDS | 35.0% | |
| ! | TTCTGAGAAACCAACGATAA+TGG | + | chr8.2:71989314-71989333 | MS.gene08498:CDS | 35.0% |
| !! | AGTATAGTAGGGTTTTGATG+AGG | + | chr8.2:71989436-71989455 | MS.gene08498:CDS | 35.0% |
| !! | TCTTTTGAGGATGAAAAAGG+AGG | + | chr8.2:71989491-71989510 | MS.gene08498:CDS | 35.0% |
| !!! | CTGTGATTTTGGAACGTTTT+AGG | - | chr8.2:71989068-71989087 | None:intergenic | 35.0% |
| AACGTGATATAATCCAACCC+AGG | - | chr8.2:71989345-71989364 | None:intergenic | 40.0% | |
| ACGTGATATAATCCAACCCA+GGG | - | chr8.2:71989344-71989363 | None:intergenic | 40.0% | |
| CAAAACCCTACTATACTCCT+TGG | - | chr8.2:71989433-71989452 | None:intergenic | 40.0% | |
| CAAGGAAGATGGGATGAAAT+TGG | + | chr8.2:71989407-71989426 | MS.gene08498:CDS | 40.0% | |
| CAATTTCATCCCATCTTCCT+TGG | - | chr8.2:71989409-71989428 | None:intergenic | 40.0% | |
| GCCTAAGTATGAATTGACCA+AGG | + | chr8.2:71989389-71989408 | MS.gene08498:CDS | 40.0% | |
| GGGTTGGATTATATCACGTT+AGG | + | chr8.2:71989345-71989364 | MS.gene08498:CDS | 40.0% | |
| TTGGGTTTGAGAAAACGAAG+CGG | - | chr8.2:71989192-71989211 | None:intergenic | 40.0% | |
| ! | AATTGGCCAAGGAGTATAGT+AGG | + | chr8.2:71989424-71989443 | MS.gene08498:CDS | 40.0% |
| ! | ACCAGCTTTTCCTTTTCCTT+TGG | - | chr8.2:71989040-71989059 | None:intergenic | 40.0% |
| ! | AGCTTTTCCTTTTCCTTTGG+CGG | - | chr8.2:71989037-71989056 | None:intergenic | 40.0% |
| ! | ATTGGCCAAGGAGTATAGTA+GGG | + | chr8.2:71989425-71989444 | MS.gene08498:CDS | 40.0% |
| !! | GGTTTTGATGAGGAAGCATA+GGG | + | chr8.2:71989446-71989465 | MS.gene08498:CDS | 40.0% |
| !!! | GTGGTTTTAGCTTTGTGAGA+CGG | - | chr8.2:71988966-71988985 | None:intergenic | 40.0% |
| AGATGGGATGAAATTGGCCA+AGG | + | chr8.2:71989413-71989432 | MS.gene08498:CDS | 45.0% | |
| AGATTAAGGAGGCTGCTGAT+AGG | + | chr8.2:71989631-71989650 | MS.gene08498:CDS | 45.0% | |
| AGGCTATTGAAGCTTTGCCT+GGG | + | chr8.2:71989511-71989530 | MS.gene08498:CDS | 45.0% | |
| CGTGATATAATCCAACCCAG+GGG | - | chr8.2:71989343-71989362 | None:intergenic | 45.0% | |
| GCCAAAGGAAAAGGAAAAGC+TGG | + | chr8.2:71989036-71989055 | MS.gene08498:CDS | 45.0% | |
| TCAGTGGGAAGGAGAAGATT+AGG | + | chr8.2:71989655-71989674 | MS.gene08498:CDS | 45.0% | |
| TTGAGAAAACGAAGCGGTGT+TGG | - | chr8.2:71989186-71989205 | None:intergenic | 45.0% | |
| !! | CATTGAGGCATTGTTCGTAG+AGG | - | chr8.2:71989161-71989180 | None:intergenic | 45.0% |
| !! | GGGTTTTGATGAGGAAGCAT+AGG | + | chr8.2:71989445-71989464 | MS.gene08498:CDS | 45.0% |
| ACCGGAAACGGCGTAAAATC+CGG | - | chr8.2:71989561-71989580 | None:intergenic | 50.0% | |
| AGGCTGCTGATAGGATCAGT+GGG | + | chr8.2:71989640-71989659 | MS.gene08498:CDS | 50.0% | |
| GAGGCTATTGAAGCTTTGCC+TGG | + | chr8.2:71989510-71989529 | MS.gene08498:CDS | 50.0% | |
| GCTATTGAAGCTTTGCCTGG+GGG | + | chr8.2:71989513-71989532 | MS.gene08498:CDS | 50.0% | |
| GGCTATTGAAGCTTTGCCTG+GGG | + | chr8.2:71989512-71989531 | MS.gene08498:CDS | 50.0% | |
| GGGTTTGAAGGAAGCTGCTT+TGG | + | chr8.2:71989533-71989552 | MS.gene08498:CDS | 50.0% | |
| TCAAACCCAAACAACGCGCA+CGG | + | chr8.2:71989202-71989221 | MS.gene08498:CDS | 50.0% | |
| TGCTGATAGGATCAGTGGGA+AGG | + | chr8.2:71989644-71989663 | MS.gene08498:CDS | 50.0% | |
| ! | AGTTGGTGCGGTGAAGATGA+CGG | - | chr8.2:71988988-71989007 | None:intergenic | 50.0% |
| ! | GTTCGCGTTCTTGTTTCTCG+CGG | - | chr8.2:71989137-71989156 | None:intergenic | 50.0% |
| ! | TTCCTTTTCCTTTGGCGGTG+CGG | - | chr8.2:71989032-71989051 | None:intergenic | 50.0% |
| ! | TTCGCGTTCTTGTTTCTCGC+GGG | - | chr8.2:71989136-71989155 | None:intergenic | 50.0% |
| ! | TTCTTGTTTCTCGCGGGATC+CGG | - | chr8.2:71989130-71989149 | None:intergenic | 50.0% |
| !! | CAACGATAATGGGAACCCCT+GGG | + | chr8.2:71989325-71989344 | MS.gene08498:CDS | 50.0% |
| ACGCTTACGCCGCCTATTGA+TGG | + | chr8.2:71989597-71989616 | MS.gene08498:CDS | 55.0% | |
| AGCTTTGCCTGGGGGTTTGA+AGG | + | chr8.2:71989521-71989540 | MS.gene08498:CDS | 55.0% | |
| CAAACCCAAACAACGCGCAC+GGG | + | chr8.2:71989203-71989222 | MS.gene08498:CDS | 55.0% | |
| CCAGGGGTTCCCATTATCGT+TGG | - | chr8.2:71989327-71989346 | None:intergenic | 55.0% | |
| CGCTTACGCCGCCTATTGAT+GGG | + | chr8.2:71989598-71989617 | MS.gene08498:CDS | 55.0% | |
| GAAGCATAGGGCGAGACAAG+CGG | + | chr8.2:71989458-71989477 | MS.gene08498:CDS | 55.0% | |
| GAGGCTGCTGATAGGATCAG+TGG | + | chr8.2:71989639-71989658 | MS.gene08498:CDS | 55.0% | |
| ! | CGGCGGAGACGAATCTTTTG+AGG | + | chr8.2:71989478-71989497 | MS.gene08498:CDS | 55.0% |
| ! | GAAGGAAGCTGCTTTGGTGC+CGG | + | chr8.2:71989539-71989558 | MS.gene08498:CDS | 55.0% |
| ! | GCCGGATTTTACGCCGTTTC+CGG | + | chr8.2:71989557-71989576 | MS.gene08498:CDS | 55.0% |
| !! | CCAACGATAATGGGAACCCC+TGG | + | chr8.2:71989324-71989343 | MS.gene08498:CDS | 55.0% |
| !! | GAAGCGGTGTTGGTGCATTG+AGG | - | chr8.2:71989176-71989195 | None:intergenic | 55.0% |
| !! | GATAATGGGAACCCCTGGGT+TGG | + | chr8.2:71989329-71989348 | MS.gene08498:CDS | 55.0% |
| AGCCGCACCGCCAAAGGAAA+AGG | + | chr8.2:71989027-71989046 | MS.gene08498:CDS | 60.0% | |
| AGCTTCCCGTGCGCGTTGTT+TGG | - | chr8.2:71989211-71989230 | None:intergenic | 60.0% | |
| GCAGCTTCCTTCAAACCCCC+AGG | - | chr8.2:71989531-71989550 | None:intergenic | 60.0% | |
| GCTTCCCGTGCGCGTTGTTT+GGG | - | chr8.2:71989210-71989229 | None:intergenic | 60.0% | |
| GTTTCTCGCGGGATCCGGTT+GGG | - | chr8.2:71989125-71989144 | None:intergenic | 60.0% | |
| TGTTTCTCGCGGGATCCGGT+TGG | - | chr8.2:71989126-71989145 | None:intergenic | 60.0% | |
| TTTCTCGCGGGATCCGGTTG+GGG | - | chr8.2:71989124-71989143 | None:intergenic | 60.0% | |
| ! | TGGTGCGGTGAAGATGACGG+TGG | - | chr8.2:71988985-71989004 | None:intergenic | 60.0% |
| !! | CAGCGTTGGAGGAGTTGGTG+CGG | - | chr8.2:71989000-71989019 | None:intergenic | 60.0% |
| GCATAGGGCGAGACAAGCGG+CGG | + | chr8.2:71989461-71989480 | MS.gene08498:CDS | 65.0% | |
| TCCAGGTGTGGGTTCGGACC+CGG | - | chr8.2:71989100-71989119 | None:intergenic | 65.0% | |
| TCCTTTGGCGGTGCGGCTGA+CGG | - | chr8.2:71989025-71989044 | None:intergenic | 65.0% | |
| TGGGGCTCCAGGTGTGGGTT+CGG | - | chr8.2:71989106-71989125 | None:intergenic | 65.0% | |
| ! | CGGAGCAGCGTTGGAGGAGT+TGG | - | chr8.2:71989005-71989024 | None:intergenic | 65.0% |
| ACCGGGTCCGAACCCACACC+TGG | + | chr8.2:71989096-71989115 | MS.gene08498:CDS | 70.0% | |
| CCCACACCTGGAGCCCCAAC+CGG | + | chr8.2:71989108-71989127 | MS.gene08498:CDS | 70.0% | |
| CCGGTTGGGGCTCCAGGTGT+GGG | - | chr8.2:71989111-71989130 | None:intergenic | 70.0% | |
| TCCGGTTGGGGCTCCAGGTG+TGG | - | chr8.2:71989112-71989131 | None:intergenic | 70.0% | |
| TCCGTCAGCCGCACCGCCAA+AGG | + | chr8.2:71989021-71989040 | MS.gene08498:CDS | 70.0% | |
| TGCGGCTGACGGAGCAGCGT+TGG | - | chr8.2:71989014-71989033 | None:intergenic | 70.0% | |
| ! | GGCTGACGGAGCAGCGTTGG+AGG | - | chr8.2:71989011-71989030 | None:intergenic | 70.0% |
| CGGGATCCGGTTGGGGCTCC+AGG | - | chr8.2:71989117-71989136 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 71988958 | 71989680 | 71988958 | ID=MS.gene08498 |
| chr8.2 | mRNA | 71988958 | 71989680 | 71988958 | ID=MS.gene08498.t1;Parent=MS.gene08498 |
| chr8.2 | exon | 71988958 | 71989680 | 71988958 | ID=MS.gene08498.t1.exon1;Parent=MS.gene08498.t1 |
| chr8.2 | CDS | 71988958 | 71989680 | 71988958 | ID=cds.MS.gene08498.t1;Parent=MS.gene08498.t1 |
| Gene Sequence |
| Protein sequence |
