Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81078.t1 | KEH18547.1 | 96.2 | 240 | 9 | 0 | 1 | 240 | 1 | 240 | 1.40E-121 | 445.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81078.t1 | A0A072TMA7 | 96.2 | 240 | 9 | 0 | 1 | 240 | 1 | 240 | 1.0e-121 | 445.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050227 | MS.gene81078 | 0.800166 | 1.64E-48 | -1.69E-46 |
| MS.gene050228 | MS.gene81078 | 0.805388 | 1.37E-49 | -1.69E-46 |
| MS.gene050719 | MS.gene81078 | 0.807882 | 4.07E-50 | -1.69E-46 |
| MS.gene050721 | MS.gene81078 | 0.807506 | 4.89E-50 | -1.69E-46 |
| MS.gene050724 | MS.gene81078 | 0.830373 | 3.05E-55 | -1.69E-46 |
| MS.gene051790 | MS.gene81078 | 0.802117 | 6.53E-49 | -1.69E-46 |
| MS.gene052012 | MS.gene81078 | 0.802973 | 4.35E-49 | -1.69E-46 |
| MS.gene057140 | MS.gene81078 | 0.80755 | 4.79E-50 | -1.69E-46 |
| MS.gene058399 | MS.gene81078 | 0.801169 | 1.02E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene81078 | MS.gene81077 | PPI |
| MS.gene59614 | MS.gene81078 | PPI |
| MS.gene81078 | MS.gene92136 | PPI |
| MS.gene98177 | MS.gene81078 | PPI |
| MS.gene08498 | MS.gene81078 | PPI |
| MS.gene79714 | MS.gene81078 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81078.t1 | MTR_8g023960 | 96.250 | 240 | 9 | 0 | 1 | 240 | 57 | 296 | 5.53e-168 | 465 |
| MS.gene81078.t1 | MTR_8g023960 | 96.250 | 240 | 9 | 0 | 1 | 240 | 1 | 240 | 1.65e-167 | 462 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81078.t1 | AT4G05400 | 56.126 | 253 | 95 | 5 | 1 | 240 | 1 | 250 | 6.80e-86 | 255 |
| MS.gene81078.t1 | AT4G05400 | 56.126 | 253 | 95 | 5 | 1 | 240 | 1 | 250 | 6.80e-86 | 255 |
| MS.gene81078.t1 | AT4G05400 | 56.126 | 253 | 95 | 5 | 1 | 240 | 1 | 250 | 6.80e-86 | 255 |
| MS.gene81078.t1 | AT4G21140 | 54.286 | 245 | 105 | 5 | 1 | 240 | 1 | 243 | 5.30e-73 | 223 |
Find 74 sgRNAs with CRISPR-Local
Find 98 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGCTTCCCGTGCGCGTTGTT+TGG | 0.253091 | 8.4:-71051215 | None:intergenic |
| GTTTCCGGAGAATAGGTTTA+TGG | 0.260771 | 8.4:+71051579 | MS.gene81078:CDS |
| TCCGGTTGGGGCTCCAGGTG+TGG | 0.303320 | 8.4:-71051116 | None:intergenic |
| GTTTCTCGCGGGATCCGGTT+GGG | 0.334744 | 8.4:-71051129 | None:intergenic |
| CGGGATCCGGTTGGGGCTCC+AGG | 0.338808 | 8.4:-71051121 | None:intergenic |
| GCTTCCCGTGCGCGTTGTTT+GGG | 0.343871 | 8.4:-71051214 | None:intergenic |
| GGGTTGGATTATATCACGTT+AGG | 0.360005 | 8.4:+71051352 | MS.gene81078:CDS |
| GGGTTTGAAGGAAGCTGCTT+TGG | 0.367116 | 8.4:+71051540 | MS.gene81078:CDS |
| TCAGTGGGAAGGAGAAGATT+AGG | 0.382186 | 8.4:+71051662 | MS.gene81078:CDS |
| TGGGGCTCCAGGTGTGGGTT+CGG | 0.385988 | 8.4:-71051110 | None:intergenic |
| GAAGGAAGATGGGATGAAAT+TGG | 0.390189 | 8.4:+71051414 | MS.gene81078:CDS |
| TTATATCACGTTAGGGTTAG+TGG | 0.395935 | 8.4:+71051360 | MS.gene81078:CDS |
| TCCTTTGGCGGTGCGGCTGA+CGG | 0.396279 | 8.4:-71051029 | None:intergenic |
| TTACGCCGTTTCCGGAGAAT+AGG | 0.397560 | 8.4:+71051572 | MS.gene81078:CDS |
| TTCTTGTTTCTCGCGGGATC+CGG | 0.402017 | 8.4:-71051134 | None:intergenic |
| GAGGCTATTGAAGCTTTGCC+TGG | 0.402944 | 8.4:+71051517 | MS.gene81078:CDS |
| TTTCTCGCGGGATCCGGTTG+GGG | 0.418787 | 8.4:-71051128 | None:intergenic |
| AATTGGCCAAGGAGTATAGT+AGG | 0.424942 | 8.4:+71051431 | MS.gene81078:CDS |
| ACGCTTACGCCGCCTATTGA+TGG | 0.425057 | 8.4:+71051604 | MS.gene81078:CDS |
| TCCAGGTGTGGGTTCGGACC+CGG | 0.427457 | 8.4:-71051104 | None:intergenic |
| AGCCGCACCGCCAAAGGAAA+AGG | 0.428181 | 8.4:+71051034 | MS.gene81078:CDS |
| CCGGTTGGGGCTCCAGGTGT+GGG | 0.437586 | 8.4:-71051115 | None:intergenic |
| CCCACACCTGGAGCCCCAAC+CGG | 0.442696 | 8.4:+71051115 | MS.gene81078:CDS |
| TGGGTATATTGAGAAGATTA+AGG | 0.447659 | 8.4:+71051624 | MS.gene81078:CDS |
| TCCGGAAACGGCGTAAAATC+CGG | 0.450268 | 8.4:-71051565 | None:intergenic |
| CGGAGCAGCGTTGGAGGAGT+TGG | 0.459479 | 8.4:-71051009 | None:intergenic |
| ACCGGGTCCGAACCCACACC+TGG | 0.460493 | 8.4:+71051103 | MS.gene81078:CDS |
| TGCGGCTGACGGAGCAGCGT+TGG | 0.460867 | 8.4:-71051018 | None:intergenic |
| TATGAATTGACGAAGGAAGA+TGG | 0.461364 | 8.4:+71051403 | MS.gene81078:CDS |
| AGATTAAGGAGGCTGCTGAT+AGG | 0.463125 | 8.4:+71051638 | MS.gene81078:CDS |
| TCCTTCGTCAATTCATACTT+AGG | 0.464649 | 8.4:-71051397 | None:intergenic |
| TTCTCAATATACCCATCAAT+AGG | 0.469115 | 8.4:-71051616 | None:intergenic |
| TGTTTCTCGCGGGATCCGGT+TGG | 0.471217 | 8.4:-71051130 | None:intergenic |
| GAAGGAAGCTGCTTTGGTGC+CGG | 0.473891 | 8.4:+71051546 | MS.gene81078:CDS |
| GGTTGGATTATATCACGTTA+GGG | 0.480423 | 8.4:+71051353 | MS.gene81078:CDS |
| CCAACGATAATGGGAACCCC+TGG | 0.483698 | 8.4:+71051331 | MS.gene81078:CDS |
| GGCTGACGGAGCAGCGTTGG+AGG | 0.488541 | 8.4:-71051015 | None:intergenic |
| ATGAATTGACGAAGGAAGAT+GGG | 0.491364 | 8.4:+71051404 | MS.gene81078:CDS |
| GGCTATTGAAGCTTTGCCTG+GGG | 0.503885 | 8.4:+71051519 | MS.gene81078:CDS |
| TTGAGAAAACGAAGCGGTGT+TGG | 0.505889 | 8.4:-71051190 | None:intergenic |
| CCAGGGGTTCCCATTATCGT+TGG | 0.516292 | 8.4:-71051331 | None:intergenic |
| ATAAACCTATTCTCCGGAAA+CGG | 0.516651 | 8.4:-71051577 | None:intergenic |
| CGCTTACGCCGCCTATTGAT+GGG | 0.516719 | 8.4:+71051605 | MS.gene81078:CDS |
| TCCGTCAGCCGCACCGCCAA+AGG | 0.523259 | 8.4:+71051028 | MS.gene81078:CDS |
| GCCAAAGGAAAAGGAAAAGC+CGG | 0.524257 | 8.4:+71051043 | MS.gene81078:CDS |
| AGGCTATTGAAGCTTTGCCT+GGG | 0.539955 | 8.4:+71051518 | MS.gene81078:CDS |
| TTCGCGTTCTTGTTTCTCGC+GGG | 0.542290 | 8.4:-71051140 | None:intergenic |
| TAGCTTTGTGAGACGGAGCA+TGG | 0.544288 | 8.4:-71050963 | None:intergenic |
| CAAAACCCTACTATACTCCT+TGG | 0.553845 | 8.4:-71051437 | None:intergenic |
| GATAATGGGAACCCCTGGGT+TGG | 0.575407 | 8.4:+71051336 | MS.gene81078:CDS |
| ATTGGCCAAGGAGTATAGTA+GGG | 0.576553 | 8.4:+71051432 | MS.gene81078:CDS |
| TCAAACCCAAACAACGCGCA+CGG | 0.580702 | 8.4:+71051209 | MS.gene81078:CDS |
| GTTCGCGTTCTTGTTTCTCG+CGG | 0.581626 | 8.4:-71051141 | None:intergenic |
| GTTGCCATAAACCTATTCTC+CGG | 0.584330 | 8.4:-71051583 | None:intergenic |
| CAAACCCAAACAACGCGCAC+GGG | 0.595471 | 8.4:+71051210 | MS.gene81078:CDS |
| GAAGCATAGGGCGAGACAAG+CGG | 0.597439 | 8.4:+71051465 | MS.gene81078:CDS |
| GCTATTGAAGCTTTGCCTGG+GGG | 0.597757 | 8.4:+71051520 | MS.gene81078:CDS |
| TGCTGATAGGATCAGTGGGA+AGG | 0.607298 | 8.4:+71051651 | MS.gene81078:CDS |
| GAGGCTGCTGATAGGATCAG+TGG | 0.610487 | 8.4:+71051646 | MS.gene81078:CDS |
| AGATGGGATGAAATTGGCCA+AGG | 0.616560 | 8.4:+71051420 | MS.gene81078:CDS |
| AACGTGATATAATCCAACCC+AGG | 0.616818 | 8.4:-71051349 | None:intergenic |
| ACGTGATATAATCCAACCCA+GGG | 0.616998 | 8.4:-71051348 | None:intergenic |
| CAACGATAATGGGAACCCCT+GGG | 0.617131 | 8.4:+71051332 | MS.gene81078:CDS |
| AGGCTGCTGATAGGATCAGT+GGG | 0.618985 | 8.4:+71051647 | MS.gene81078:CDS |
| GAAGCGGTGTTGGTGCATTG+AGG | 0.621239 | 8.4:-71051180 | None:intergenic |
| CAGCGTTGGAGGAGTTGGTG+CGG | 0.641635 | 8.4:-71051004 | None:intergenic |
| AGTTGGTGCGGTGAAGATGA+CGG | 0.654761 | 8.4:-71050992 | None:intergenic |
| GCATAGGGCGAGACAAGCGG+CGG | 0.658080 | 8.4:+71051468 | MS.gene81078:CDS |
| GCCTAAGTATGAATTGACGA+AGG | 0.676673 | 8.4:+71051396 | MS.gene81078:CDS |
| TCAATATACCCATCAATAGG+CGG | 0.683015 | 8.4:-71051613 | None:intergenic |
| GTATATTGAGAAGATTAAGG+AGG | 0.685736 | 8.4:+71051627 | MS.gene81078:CDS |
| TGGTGCGGTGAAGATGACGG+TGG | 0.737129 | 8.4:-71050989 | None:intergenic |
| TTGGGTTTGAGAAAACGAAG+CGG | 0.742669 | 8.4:-71051196 | None:intergenic |
| CGTGATATAATCCAACCCAG+GGG | 0.794978 | 8.4:-71051347 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATCACAGTAAAAAAAAC+CGG | + | chr8.4:71051085-71051104 | MS.gene81078:CDS | 20.0% |
| ! | AAATCACAGTAAAAAAAACC+GGG | + | chr8.4:71051086-71051105 | MS.gene81078:CDS | 25.0% |
| !!! | GGTTTTTTTTACTGTGATTT+TGG | - | chr8.4:71051086-71051105 | None:intergenic | 25.0% |
| !!! | TTTTTCAGAAACCCTAAATT+TGG | - | chr8.4:71051311-71051330 | None:intergenic | 25.0% |
| AAGCTGAACGAGAAAAATTA+GGG | + | chr8.4:71051233-71051252 | MS.gene81078:CDS | 30.0% | |
| AGAAGAAAAACGCCAAATTT+AGG | + | chr8.4:71051296-71051315 | MS.gene81078:CDS | 30.0% | |
| GAAGAAAAACGCCAAATTTA+GGG | + | chr8.4:71051297-71051316 | MS.gene81078:CDS | 30.0% | |
| GTATATTGAGAAGATTAAGG+AGG | + | chr8.4:71051627-71051646 | MS.gene81078:CDS | 30.0% | |
| TCTGAAAAACCAACGATAAT+GGG | + | chr8.4:71051322-71051341 | MS.gene81078:CDS | 30.0% | |
| TGGGTATATTGAGAAGATTA+AGG | + | chr8.4:71051624-71051643 | MS.gene81078:CDS | 30.0% | |
| TTCTCAATATACCCATCAAT+AGG | - | chr8.4:71051619-71051638 | None:intergenic | 30.0% | |
| ! | TTCTGAAAAACCAACGATAA+TGG | + | chr8.4:71051321-71051340 | MS.gene81078:CDS | 30.0% |
| !! | GAATCTTTTGAGGATGAAAA+AGG | + | chr8.4:71051495-71051514 | MS.gene81078:CDS | 30.0% |
| ATAAACCTATTCTCCGGAAA+CGG | - | chr8.4:71051580-71051599 | None:intergenic | 35.0% | |
| ATGAATTGACGAAGGAAGAT+GGG | + | chr8.4:71051404-71051423 | MS.gene81078:CDS | 35.0% | |
| GAAGCTGAACGAGAAAAATT+AGG | + | chr8.4:71051232-71051251 | MS.gene81078:CDS | 35.0% | |
| GGTTGGATTATATCACGTTA+GGG | + | chr8.4:71051353-71051372 | MS.gene81078:CDS | 35.0% | |
| TATGAATTGACGAAGGAAGA+TGG | + | chr8.4:71051403-71051422 | MS.gene81078:CDS | 35.0% | |
| TCAATATACCCATCAATAGG+CGG | - | chr8.4:71051616-71051635 | None:intergenic | 35.0% | |
| TCCTTCGTCAATTCATACTT+AGG | - | chr8.4:71051400-71051419 | None:intergenic | 35.0% | |
| TTATATCACGTTAGGGTTAG+TGG | + | chr8.4:71051360-71051379 | MS.gene81078:CDS | 35.0% | |
| !! | AGTATAGTAGGGTTTTGATG+AGG | + | chr8.4:71051443-71051462 | MS.gene81078:CDS | 35.0% |
| !! | TCTTTTGAGGATGAAAAAGG+AGG | + | chr8.4:71051498-71051517 | MS.gene81078:CDS | 35.0% |
| !!! | CTGTGATTTTGGAACGTTTT+AGG | - | chr8.4:71051075-71051094 | None:intergenic | 35.0% |
| AACGTGATATAATCCAACCC+AGG | - | chr8.4:71051352-71051371 | None:intergenic | 40.0% | |
| ACGTGATATAATCCAACCCA+GGG | - | chr8.4:71051351-71051370 | None:intergenic | 40.0% | |
| CAAAACCCTACTATACTCCT+TGG | - | chr8.4:71051440-71051459 | None:intergenic | 40.0% | |
| GAAGGAAGATGGGATGAAAT+TGG | + | chr8.4:71051414-71051433 | MS.gene81078:CDS | 40.0% | |
| GCCTAAGTATGAATTGACGA+AGG | + | chr8.4:71051396-71051415 | MS.gene81078:CDS | 40.0% | |
| GGGTTGGATTATATCACGTT+AGG | + | chr8.4:71051352-71051371 | MS.gene81078:CDS | 40.0% | |
| GTTGCCATAAACCTATTCTC+CGG | - | chr8.4:71051586-71051605 | None:intergenic | 40.0% | |
| GTTTCCGGAGAATAGGTTTA+TGG | + | chr8.4:71051579-71051598 | MS.gene81078:CDS | 40.0% | |
| TTGGGTTTGAGAAAACGAAG+CGG | - | chr8.4:71051199-71051218 | None:intergenic | 40.0% | |
| ! | AATTGGCCAAGGAGTATAGT+AGG | + | chr8.4:71051431-71051450 | MS.gene81078:CDS | 40.0% |
| ! | ATTGGCCAAGGAGTATAGTA+GGG | + | chr8.4:71051432-71051451 | MS.gene81078:CDS | 40.0% |
| !! | GGTTTTGATGAGGAAGCATA+GGG | + | chr8.4:71051453-71051472 | MS.gene81078:CDS | 40.0% |
| !!! | GGAACGTTTTAGGATTTGAC+CGG | - | chr8.4:71051065-71051084 | None:intergenic | 40.0% |
| !!! | GTGGTTTTAGCTTTGTGAGA+CGG | - | chr8.4:71050973-71050992 | None:intergenic | 40.0% |
| AGATGGGATGAAATTGGCCA+AGG | + | chr8.4:71051420-71051439 | MS.gene81078:CDS | 45.0% | |
| AGATTAAGGAGGCTGCTGAT+AGG | + | chr8.4:71051638-71051657 | MS.gene81078:CDS | 45.0% | |
| AGGCTATTGAAGCTTTGCCT+GGG | + | chr8.4:71051518-71051537 | MS.gene81078:CDS | 45.0% | |
| CGTGATATAATCCAACCCAG+GGG | - | chr8.4:71051350-71051369 | None:intergenic | 45.0% | |
| GCCAAAGGAAAAGGAAAAGC+CGG | + | chr8.4:71051043-71051062 | MS.gene81078:CDS | 45.0% | |
| TCAGTGGGAAGGAGAAGATT+AGG | + | chr8.4:71051662-71051681 | MS.gene81078:CDS | 45.0% | |
| TTGAGAAAACGAAGCGGTGT+TGG | - | chr8.4:71051193-71051212 | None:intergenic | 45.0% | |
| ! | GGCTTTTCCTTTTCCTTTGG+CGG | - | chr8.4:71051044-71051063 | None:intergenic | 45.0% |
| !! | ACCGGCTTTTCCTTTTCCTT+TGG | - | chr8.4:71051047-71051066 | None:intergenic | 45.0% |
| !! | GGGTTTTGATGAGGAAGCAT+AGG | + | chr8.4:71051452-71051471 | MS.gene81078:CDS | 45.0% |
| AGGCTGCTGATAGGATCAGT+GGG | + | chr8.4:71051647-71051666 | MS.gene81078:CDS | 50.0% | |
| GAGGCTATTGAAGCTTTGCC+TGG | + | chr8.4:71051517-71051536 | MS.gene81078:CDS | 50.0% | |
| GCTATTGAAGCTTTGCCTGG+GGG | + | chr8.4:71051520-71051539 | MS.gene81078:CDS | 50.0% | |
| GGCTATTGAAGCTTTGCCTG+GGG | + | chr8.4:71051519-71051538 | MS.gene81078:CDS | 50.0% | |
| GGGTTTGAAGGAAGCTGCTT+TGG | + | chr8.4:71051540-71051559 | MS.gene81078:CDS | 50.0% | |
| TCAAACCCAAACAACGCGCA+CGG | + | chr8.4:71051209-71051228 | MS.gene81078:CDS | 50.0% | |
| TCCGGAAACGGCGTAAAATC+CGG | - | chr8.4:71051568-71051587 | None:intergenic | 50.0% | |
| TGCTGATAGGATCAGTGGGA+AGG | + | chr8.4:71051651-71051670 | MS.gene81078:CDS | 50.0% | |
| TTACGCCGTTTCCGGAGAAT+AGG | + | chr8.4:71051572-71051591 | MS.gene81078:CDS | 50.0% | |
| ! | AGTTGGTGCGGTGAAGATGA+CGG | - | chr8.4:71050995-71051014 | None:intergenic | 50.0% |
| ! | GTTCGCGTTCTTGTTTCTCG+CGG | - | chr8.4:71051144-71051163 | None:intergenic | 50.0% |
| ! | TTCCTTTTCCTTTGGCGGTG+CGG | - | chr8.4:71051039-71051058 | None:intergenic | 50.0% |
| ! | TTCGCGTTCTTGTTTCTCGC+GGG | - | chr8.4:71051143-71051162 | None:intergenic | 50.0% |
| ! | TTCTTGTTTCTCGCGGGATC+CGG | - | chr8.4:71051137-71051156 | None:intergenic | 50.0% |
| !! | CAACGATAATGGGAACCCCT+GGG | + | chr8.4:71051332-71051351 | MS.gene81078:CDS | 50.0% |
| ACGCTTACGCCGCCTATTGA+TGG | + | chr8.4:71051604-71051623 | MS.gene81078:CDS | 55.0% | |
| AGCTTTGCCTGGGGGTTTGA+AGG | + | chr8.4:71051528-71051547 | MS.gene81078:CDS | 55.0% | |
| CAAACCCAAACAACGCGCAC+GGG | + | chr8.4:71051210-71051229 | MS.gene81078:CDS | 55.0% | |
| CCAGGGGTTCCCATTATCGT+TGG | - | chr8.4:71051334-71051353 | None:intergenic | 55.0% | |
| CGCTTACGCCGCCTATTGAT+GGG | + | chr8.4:71051605-71051624 | MS.gene81078:CDS | 55.0% | |
| GAAGCATAGGGCGAGACAAG+CGG | + | chr8.4:71051465-71051484 | MS.gene81078:CDS | 55.0% | |
| GAGGCTGCTGATAGGATCAG+TGG | + | chr8.4:71051646-71051665 | MS.gene81078:CDS | 55.0% | |
| ! | CGGCGGAGACGAATCTTTTG+AGG | + | chr8.4:71051485-71051504 | MS.gene81078:CDS | 55.0% |
| ! | GAAGGAAGCTGCTTTGGTGC+CGG | + | chr8.4:71051546-71051565 | MS.gene81078:CDS | 55.0% |
| ! | GCCGGATTTTACGCCGTTTC+CGG | + | chr8.4:71051564-71051583 | MS.gene81078:CDS | 55.0% |
| !! | CCAACGATAATGGGAACCCC+TGG | + | chr8.4:71051331-71051350 | MS.gene81078:CDS | 55.0% |
| !! | GAAGCGGTGTTGGTGCATTG+AGG | - | chr8.4:71051183-71051202 | None:intergenic | 55.0% |
| !! | GATAATGGGAACCCCTGGGT+TGG | + | chr8.4:71051336-71051355 | MS.gene81078:CDS | 55.0% |
| AGCCGCACCGCCAAAGGAAA+AGG | + | chr8.4:71051034-71051053 | MS.gene81078:CDS | 60.0% | |
| AGCTTCCCGTGCGCGTTGTT+TGG | - | chr8.4:71051218-71051237 | None:intergenic | 60.0% | |
| GCAGCTTCCTTCAAACCCCC+AGG | - | chr8.4:71051538-71051557 | None:intergenic | 60.0% | |
| GCTTCCCGTGCGCGTTGTTT+GGG | - | chr8.4:71051217-71051236 | None:intergenic | 60.0% | |
| GTTTCTCGCGGGATCCGGTT+GGG | - | chr8.4:71051132-71051151 | None:intergenic | 60.0% | |
| TGTTTCTCGCGGGATCCGGT+TGG | - | chr8.4:71051133-71051152 | None:intergenic | 60.0% | |
| TTTCTCGCGGGATCCGGTTG+GGG | - | chr8.4:71051131-71051150 | None:intergenic | 60.0% | |
| ! | TGGTGCGGTGAAGATGACGG+TGG | - | chr8.4:71050992-71051011 | None:intergenic | 60.0% |
| !! | CAGCGTTGGAGGAGTTGGTG+CGG | - | chr8.4:71051007-71051026 | None:intergenic | 60.0% |
| GCATAGGGCGAGACAAGCGG+CGG | + | chr8.4:71051468-71051487 | MS.gene81078:CDS | 65.0% | |
| TCCAGGTGTGGGTTCGGACC+CGG | - | chr8.4:71051107-71051126 | None:intergenic | 65.0% | |
| TCCTTTGGCGGTGCGGCTGA+CGG | - | chr8.4:71051032-71051051 | None:intergenic | 65.0% | |
| TGGGGCTCCAGGTGTGGGTT+CGG | - | chr8.4:71051113-71051132 | None:intergenic | 65.0% | |
| ! | CGGAGCAGCGTTGGAGGAGT+TGG | - | chr8.4:71051012-71051031 | None:intergenic | 65.0% |
| ACCGGGTCCGAACCCACACC+TGG | + | chr8.4:71051103-71051122 | MS.gene81078:CDS | 70.0% | |
| CCCACACCTGGAGCCCCAAC+CGG | + | chr8.4:71051115-71051134 | MS.gene81078:CDS | 70.0% | |
| CCGGTTGGGGCTCCAGGTGT+GGG | - | chr8.4:71051118-71051137 | None:intergenic | 70.0% | |
| TCCGGTTGGGGCTCCAGGTG+TGG | - | chr8.4:71051119-71051138 | None:intergenic | 70.0% | |
| TCCGTCAGCCGCACCGCCAA+AGG | + | chr8.4:71051028-71051047 | MS.gene81078:CDS | 70.0% | |
| TGCGGCTGACGGAGCAGCGT+TGG | - | chr8.4:71051021-71051040 | None:intergenic | 70.0% | |
| ! | GGCTGACGGAGCAGCGTTGG+AGG | - | chr8.4:71051018-71051037 | None:intergenic | 70.0% |
| CGGGATCCGGTTGGGGCTCC+AGG | - | chr8.4:71051124-71051143 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 71050965 | 71051687 | 71050965 | ID=MS.gene81078 |
| chr8.4 | mRNA | 71050965 | 71051687 | 71050965 | ID=MS.gene81078.t1;Parent=MS.gene81078 |
| chr8.4 | exon | 71050965 | 71051687 | 71050965 | ID=MS.gene81078.t1.exon1;Parent=MS.gene81078.t1 |
| chr8.4 | CDS | 71050965 | 71051687 | 71050965 | ID=cds.MS.gene81078.t1;Parent=MS.gene81078.t1 |
| Gene Sequence |
| Protein sequence |
