Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81077.t1 | KEH18547.1 | 96.7 | 240 | 8 | 0 | 1 | 240 | 1 | 240 | 1.70E-122 | 448.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81077.t1 | A0A072TMA7 | 96.7 | 240 | 8 | 0 | 1 | 240 | 1 | 240 | 1.2e-122 | 448.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049501 | MS.gene81077 | 0.820311 | 7.33E-53 | -1.69E-46 |
| MS.gene050724 | MS.gene81077 | 0.813566 | 2.40E-51 | -1.69E-46 |
| MS.gene052012 | MS.gene81077 | 0.810606 | 1.06E-50 | -1.69E-46 |
| MS.gene053008 | MS.gene81077 | 0.803798 | 2.94E-49 | -1.69E-46 |
| MS.gene055818 | MS.gene81077 | 0.811937 | 5.45E-51 | -1.69E-46 |
| MS.gene056506 | MS.gene81077 | 0.815432 | 9.27E-52 | -1.69E-46 |
| MS.gene060572 | MS.gene81077 | 0.808203 | 3.48E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene81078 | MS.gene81077 | PPI |
| MS.gene79714 | MS.gene81077 | PPI |
| MS.gene59614 | MS.gene81077 | PPI |
| MS.gene81077 | MS.gene92136 | PPI |
| MS.gene92136 | MS.gene81077 | PPI |
| MS.gene98177 | MS.gene81077 | PPI |
| MS.gene08498 | MS.gene81077 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81077.t1 | MTR_8g023960 | 96.667 | 240 | 8 | 0 | 1 | 240 | 57 | 296 | 1.02e-169 | 469 |
| MS.gene81077.t1 | MTR_8g023960 | 96.667 | 240 | 8 | 0 | 1 | 240 | 1 | 240 | 2.53e-169 | 466 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene81077.t1 | AT4G05400 | 55.731 | 253 | 96 | 5 | 1 | 240 | 1 | 250 | 3.06e-85 | 254 |
| MS.gene81077.t1 | AT4G05400 | 55.731 | 253 | 96 | 5 | 1 | 240 | 1 | 250 | 3.06e-85 | 254 |
| MS.gene81077.t1 | AT4G05400 | 55.731 | 253 | 96 | 5 | 1 | 240 | 1 | 250 | 3.06e-85 | 254 |
| MS.gene81077.t1 | AT4G21140 | 54.286 | 245 | 105 | 5 | 1 | 240 | 1 | 243 | 6.38e-73 | 222 |
Find 73 sgRNAs with CRISPR-Local
Find 97 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTTCCGGTGAATATGTTTA+TGG | 0.209095 | 8.4:+71058203 | MS.gene81077:CDS |
| AGCTTCCCGTGCGCGTTGTT+TGG | 0.253091 | 8.4:-71057839 | None:intergenic |
| TCCGGTTGGGGCTCCAGGTG+TGG | 0.303320 | 8.4:-71057740 | None:intergenic |
| GTTTCTCGCGGGATCCGGTT+GGG | 0.334744 | 8.4:-71057753 | None:intergenic |
| CGGGATCCGGTTGGGGCTCC+AGG | 0.338808 | 8.4:-71057745 | None:intergenic |
| GCTTCCCGTGCGCGTTGTTT+GGG | 0.343871 | 8.4:-71057838 | None:intergenic |
| GGGTTGGATTATATCACGTT+AGG | 0.360005 | 8.4:+71057976 | MS.gene81077:CDS |
| GGGTTTGAAGGAAGCTGCTT+TGG | 0.367116 | 8.4:+71058164 | MS.gene81077:CDS |
| TCAGTGGGAAGGAGAAGATT+AGG | 0.382186 | 8.4:+71058286 | MS.gene81077:CDS |
| TGGGGCTCCAGGTGTGGGTT+CGG | 0.385988 | 8.4:-71057734 | None:intergenic |
| GAAGGAAGATGGGATGAAAT+TGG | 0.390189 | 8.4:+71058038 | MS.gene81077:CDS |
| TTATATCACGTTAGGGTTAG+TGG | 0.395935 | 8.4:+71057984 | MS.gene81077:CDS |
| TCCTTTGGCGGTGCGGCTGA+CGG | 0.396279 | 8.4:-71057653 | None:intergenic |
| TTCTTGTTTCTCGCGGGATC+CGG | 0.402017 | 8.4:-71057758 | None:intergenic |
| GAGGCTATTGAAGCTTTGCC+TGG | 0.402944 | 8.4:+71058141 | MS.gene81077:CDS |
| TTTCTCGCGGGATCCGGTTG+GGG | 0.418787 | 8.4:-71057752 | None:intergenic |
| AATTGGCCAAGGAGTATAGT+AGG | 0.424942 | 8.4:+71058055 | MS.gene81077:CDS |
| ACGCTTACGCCGCCTATTGA+TGG | 0.425057 | 8.4:+71058228 | MS.gene81077:CDS |
| TCCAGGTGTGGGTTCGGACC+CGG | 0.427457 | 8.4:-71057728 | None:intergenic |
| AGCCGCACCGCCAAAGGAAA+AGG | 0.428181 | 8.4:+71057658 | MS.gene81077:CDS |
| CCGGTTGGGGCTCCAGGTGT+GGG | 0.437586 | 8.4:-71057739 | None:intergenic |
| ATAAACATATTCACCGGAAA+CGG | 0.439011 | 8.4:-71058201 | None:intergenic |
| CCCACACCTGGAGCCCCAAC+CGG | 0.442696 | 8.4:+71057739 | MS.gene81077:CDS |
| TGGGTATATTGAGAAGATTA+AGG | 0.447659 | 8.4:+71058248 | MS.gene81077:CDS |
| CGGAGCAGCGTTGGAGGAGT+TGG | 0.459479 | 8.4:-71057633 | None:intergenic |
| ACCGGGTCCGAACCCACACC+TGG | 0.460493 | 8.4:+71057727 | MS.gene81077:CDS |
| TGCGGCTGACGGAGCAGCGT+TGG | 0.460867 | 8.4:-71057642 | None:intergenic |
| TATGAATTGACGAAGGAAGA+TGG | 0.461364 | 8.4:+71058027 | MS.gene81077:CDS |
| AGATTAAGGAGGCTGCTGAT+AGG | 0.463125 | 8.4:+71058262 | MS.gene81077:CDS |
| ACCGGAAACGGCGTAAAATC+CGG | 0.463153 | 8.4:-71058189 | None:intergenic |
| TCCTTCGTCAATTCATACTT+AGG | 0.464649 | 8.4:-71058021 | None:intergenic |
| TTCTCAATATACCCATCAAT+AGG | 0.469115 | 8.4:-71058240 | None:intergenic |
| TGTTTCTCGCGGGATCCGGT+TGG | 0.471217 | 8.4:-71057754 | None:intergenic |
| GAAGGAAGCTGCTTTGGTGC+CGG | 0.473891 | 8.4:+71058170 | MS.gene81077:CDS |
| GGTTGGATTATATCACGTTA+GGG | 0.480423 | 8.4:+71057977 | MS.gene81077:CDS |
| CCAACGATAATGGGAACCCC+TGG | 0.483698 | 8.4:+71057955 | MS.gene81077:CDS |
| GGCTGACGGAGCAGCGTTGG+AGG | 0.488541 | 8.4:-71057639 | None:intergenic |
| ATGAATTGACGAAGGAAGAT+GGG | 0.491364 | 8.4:+71058028 | MS.gene81077:CDS |
| GGCTATTGAAGCTTTGCCTG+GGG | 0.503885 | 8.4:+71058143 | MS.gene81077:CDS |
| TTGAGAAAACGAAGCGGTGT+TGG | 0.505889 | 8.4:-71057814 | None:intergenic |
| CCAGGGGTTCCCATTATCGT+TGG | 0.516292 | 8.4:-71057955 | None:intergenic |
| CGCTTACGCCGCCTATTGAT+GGG | 0.516719 | 8.4:+71058229 | MS.gene81077:CDS |
| TCCGTCAGCCGCACCGCCAA+AGG | 0.523259 | 8.4:+71057652 | MS.gene81077:CDS |
| GCCAAAGGAAAAGGAAAAGC+CGG | 0.524257 | 8.4:+71057667 | MS.gene81077:CDS |
| AGGCTATTGAAGCTTTGCCT+GGG | 0.539955 | 8.4:+71058142 | MS.gene81077:CDS |
| TTCGCGTTCTTGTTTCTCGC+GGG | 0.542290 | 8.4:-71057764 | None:intergenic |
| TAGCTTTGTGAGACGGAGCA+TGG | 0.544288 | 8.4:-71057587 | None:intergenic |
| CAAAACCCTACTATACTCCT+TGG | 0.553845 | 8.4:-71058061 | None:intergenic |
| GATAATGGGAACCCCTGGGT+TGG | 0.575407 | 8.4:+71057960 | MS.gene81077:CDS |
| ATTGGCCAAGGAGTATAGTA+GGG | 0.576553 | 8.4:+71058056 | MS.gene81077:CDS |
| TCAAACCCAAACAACGCGCA+CGG | 0.580702 | 8.4:+71057833 | MS.gene81077:CDS |
| GTTCGCGTTCTTGTTTCTCG+CGG | 0.581626 | 8.4:-71057765 | None:intergenic |
| CAAACCCAAACAACGCGCAC+GGG | 0.595471 | 8.4:+71057834 | MS.gene81077:CDS |
| GAAGCATAGGGCGAGACAAG+CGG | 0.597439 | 8.4:+71058089 | MS.gene81077:CDS |
| GCTATTGAAGCTTTGCCTGG+GGG | 0.597757 | 8.4:+71058144 | MS.gene81077:CDS |
| TGCTGATAGGATCAGTGGGA+AGG | 0.607298 | 8.4:+71058275 | MS.gene81077:CDS |
| GAGGCTGCTGATAGGATCAG+TGG | 0.610487 | 8.4:+71058270 | MS.gene81077:CDS |
| AGATGGGATGAAATTGGCCA+AGG | 0.616560 | 8.4:+71058044 | MS.gene81077:CDS |
| AACGTGATATAATCCAACCC+AGG | 0.616818 | 8.4:-71057973 | None:intergenic |
| ACGTGATATAATCCAACCCA+GGG | 0.616998 | 8.4:-71057972 | None:intergenic |
| CAACGATAATGGGAACCCCT+GGG | 0.617131 | 8.4:+71057956 | MS.gene81077:CDS |
| AGGCTGCTGATAGGATCAGT+GGG | 0.618985 | 8.4:+71058271 | MS.gene81077:CDS |
| GAAGCGGTGTTGGTGCATTG+AGG | 0.621239 | 8.4:-71057804 | None:intergenic |
| GTTGCCATAAACATATTCAC+CGG | 0.628444 | 8.4:-71058207 | None:intergenic |
| CAGCGTTGGAGGAGTTGGTG+CGG | 0.641635 | 8.4:-71057628 | None:intergenic |
| AGTTGGTGCGGTGAAGATGA+CGG | 0.654761 | 8.4:-71057616 | None:intergenic |
| GCATAGGGCGAGACAAGCGG+CGG | 0.658080 | 8.4:+71058092 | MS.gene81077:CDS |
| GCCTAAGTATGAATTGACGA+AGG | 0.676673 | 8.4:+71058020 | MS.gene81077:CDS |
| TCAATATACCCATCAATAGG+CGG | 0.683015 | 8.4:-71058237 | None:intergenic |
| GTATATTGAGAAGATTAAGG+AGG | 0.685736 | 8.4:+71058251 | MS.gene81077:CDS |
| TGGTGCGGTGAAGATGACGG+TGG | 0.737129 | 8.4:-71057613 | None:intergenic |
| TTGGGTTTGAGAAAACGAAG+CGG | 0.742669 | 8.4:-71057820 | None:intergenic |
| CGTGATATAATCCAACCCAG+GGG | 0.794978 | 8.4:-71057971 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATCACAGTAAAAAAAAC+CGG | + | chr8.4:71057709-71057728 | MS.gene81077:CDS | 20.0% |
| ! | AAATCACAGTAAAAAAAACC+GGG | + | chr8.4:71057710-71057729 | MS.gene81077:CDS | 25.0% |
| !!! | GGTTTTTTTTACTGTGATTT+TGG | - | chr8.4:71057710-71057729 | None:intergenic | 25.0% |
| !!! | TTTTTCAGAAACCCTAAATT+TGG | - | chr8.4:71057935-71057954 | None:intergenic | 25.0% |
| AAGCTGAACGAGAAAAATTA+GGG | + | chr8.4:71057857-71057876 | MS.gene81077:CDS | 30.0% | |
| AGAAGAAAAACGCCAAATTT+AGG | + | chr8.4:71057920-71057939 | MS.gene81077:CDS | 30.0% | |
| ATAAACATATTCACCGGAAA+CGG | - | chr8.4:71058204-71058223 | None:intergenic | 30.0% | |
| GAAGAAAAACGCCAAATTTA+GGG | + | chr8.4:71057921-71057940 | MS.gene81077:CDS | 30.0% | |
| GTATATTGAGAAGATTAAGG+AGG | + | chr8.4:71058251-71058270 | MS.gene81077:CDS | 30.0% | |
| TCTGAAAAACCAACGATAAT+GGG | + | chr8.4:71057946-71057965 | MS.gene81077:CDS | 30.0% | |
| TGGGTATATTGAGAAGATTA+AGG | + | chr8.4:71058248-71058267 | MS.gene81077:CDS | 30.0% | |
| TTCTCAATATACCCATCAAT+AGG | - | chr8.4:71058243-71058262 | None:intergenic | 30.0% | |
| ! | TTCTGAAAAACCAACGATAA+TGG | + | chr8.4:71057945-71057964 | MS.gene81077:CDS | 30.0% |
| !! | GAATCTTTTGAGGATGAAAA+AGG | + | chr8.4:71058119-71058138 | MS.gene81077:CDS | 30.0% |
| ATGAATTGACGAAGGAAGAT+GGG | + | chr8.4:71058028-71058047 | MS.gene81077:CDS | 35.0% | |
| GAAGCTGAACGAGAAAAATT+AGG | + | chr8.4:71057856-71057875 | MS.gene81077:CDS | 35.0% | |
| GGTTGGATTATATCACGTTA+GGG | + | chr8.4:71057977-71057996 | MS.gene81077:CDS | 35.0% | |
| GTTGCCATAAACATATTCAC+CGG | - | chr8.4:71058210-71058229 | None:intergenic | 35.0% | |
| GTTTCCGGTGAATATGTTTA+TGG | + | chr8.4:71058203-71058222 | MS.gene81077:CDS | 35.0% | |
| TATGAATTGACGAAGGAAGA+TGG | + | chr8.4:71058027-71058046 | MS.gene81077:CDS | 35.0% | |
| TCAATATACCCATCAATAGG+CGG | - | chr8.4:71058240-71058259 | None:intergenic | 35.0% | |
| TCCTTCGTCAATTCATACTT+AGG | - | chr8.4:71058024-71058043 | None:intergenic | 35.0% | |
| TTATATCACGTTAGGGTTAG+TGG | + | chr8.4:71057984-71058003 | MS.gene81077:CDS | 35.0% | |
| !! | AGTATAGTAGGGTTTTGATG+AGG | + | chr8.4:71058067-71058086 | MS.gene81077:CDS | 35.0% |
| !! | TCTTTTGAGGATGAAAAAGG+AGG | + | chr8.4:71058122-71058141 | MS.gene81077:CDS | 35.0% |
| !!! | CTGTGATTTTGGAACGTTTT+AGG | - | chr8.4:71057699-71057718 | None:intergenic | 35.0% |
| AACGTGATATAATCCAACCC+AGG | - | chr8.4:71057976-71057995 | None:intergenic | 40.0% | |
| ACGTGATATAATCCAACCCA+GGG | - | chr8.4:71057975-71057994 | None:intergenic | 40.0% | |
| CAAAACCCTACTATACTCCT+TGG | - | chr8.4:71058064-71058083 | None:intergenic | 40.0% | |
| GAAGGAAGATGGGATGAAAT+TGG | + | chr8.4:71058038-71058057 | MS.gene81077:CDS | 40.0% | |
| GCCTAAGTATGAATTGACGA+AGG | + | chr8.4:71058020-71058039 | MS.gene81077:CDS | 40.0% | |
| GGGTTGGATTATATCACGTT+AGG | + | chr8.4:71057976-71057995 | MS.gene81077:CDS | 40.0% | |
| TTGGGTTTGAGAAAACGAAG+CGG | - | chr8.4:71057823-71057842 | None:intergenic | 40.0% | |
| ! | AATTGGCCAAGGAGTATAGT+AGG | + | chr8.4:71058055-71058074 | MS.gene81077:CDS | 40.0% |
| ! | ATTGGCCAAGGAGTATAGTA+GGG | + | chr8.4:71058056-71058075 | MS.gene81077:CDS | 40.0% |
| !! | GGTTTTGATGAGGAAGCATA+GGG | + | chr8.4:71058077-71058096 | MS.gene81077:CDS | 40.0% |
| !!! | GGAACGTTTTAGGATTTGAC+CGG | - | chr8.4:71057689-71057708 | None:intergenic | 40.0% |
| !!! | GTGGTTTTAGCTTTGTGAGA+CGG | - | chr8.4:71057597-71057616 | None:intergenic | 40.0% |
| AGATGGGATGAAATTGGCCA+AGG | + | chr8.4:71058044-71058063 | MS.gene81077:CDS | 45.0% | |
| AGATTAAGGAGGCTGCTGAT+AGG | + | chr8.4:71058262-71058281 | MS.gene81077:CDS | 45.0% | |
| AGGCTATTGAAGCTTTGCCT+GGG | + | chr8.4:71058142-71058161 | MS.gene81077:CDS | 45.0% | |
| CGTGATATAATCCAACCCAG+GGG | - | chr8.4:71057974-71057993 | None:intergenic | 45.0% | |
| GCCAAAGGAAAAGGAAAAGC+CGG | + | chr8.4:71057667-71057686 | MS.gene81077:CDS | 45.0% | |
| TCAGTGGGAAGGAGAAGATT+AGG | + | chr8.4:71058286-71058305 | MS.gene81077:CDS | 45.0% | |
| TTGAGAAAACGAAGCGGTGT+TGG | - | chr8.4:71057817-71057836 | None:intergenic | 45.0% | |
| ! | GGCTTTTCCTTTTCCTTTGG+CGG | - | chr8.4:71057668-71057687 | None:intergenic | 45.0% |
| !! | ACCGGCTTTTCCTTTTCCTT+TGG | - | chr8.4:71057671-71057690 | None:intergenic | 45.0% |
| !! | GGGTTTTGATGAGGAAGCAT+AGG | + | chr8.4:71058076-71058095 | MS.gene81077:CDS | 45.0% |
| ACCGGAAACGGCGTAAAATC+CGG | - | chr8.4:71058192-71058211 | None:intergenic | 50.0% | |
| AGGCTGCTGATAGGATCAGT+GGG | + | chr8.4:71058271-71058290 | MS.gene81077:CDS | 50.0% | |
| GAGGCTATTGAAGCTTTGCC+TGG | + | chr8.4:71058141-71058160 | MS.gene81077:CDS | 50.0% | |
| GCTATTGAAGCTTTGCCTGG+GGG | + | chr8.4:71058144-71058163 | MS.gene81077:CDS | 50.0% | |
| GGCTATTGAAGCTTTGCCTG+GGG | + | chr8.4:71058143-71058162 | MS.gene81077:CDS | 50.0% | |
| GGGTTTGAAGGAAGCTGCTT+TGG | + | chr8.4:71058164-71058183 | MS.gene81077:CDS | 50.0% | |
| TCAAACCCAAACAACGCGCA+CGG | + | chr8.4:71057833-71057852 | MS.gene81077:CDS | 50.0% | |
| TGCTGATAGGATCAGTGGGA+AGG | + | chr8.4:71058275-71058294 | MS.gene81077:CDS | 50.0% | |
| ! | AGTTGGTGCGGTGAAGATGA+CGG | - | chr8.4:71057619-71057638 | None:intergenic | 50.0% |
| ! | GTTCGCGTTCTTGTTTCTCG+CGG | - | chr8.4:71057768-71057787 | None:intergenic | 50.0% |
| ! | TTCCTTTTCCTTTGGCGGTG+CGG | - | chr8.4:71057663-71057682 | None:intergenic | 50.0% |
| ! | TTCGCGTTCTTGTTTCTCGC+GGG | - | chr8.4:71057767-71057786 | None:intergenic | 50.0% |
| ! | TTCTTGTTTCTCGCGGGATC+CGG | - | chr8.4:71057761-71057780 | None:intergenic | 50.0% |
| !! | CAACGATAATGGGAACCCCT+GGG | + | chr8.4:71057956-71057975 | MS.gene81077:CDS | 50.0% |
| ACGCTTACGCCGCCTATTGA+TGG | + | chr8.4:71058228-71058247 | MS.gene81077:CDS | 55.0% | |
| AGCTTTGCCTGGGGGTTTGA+AGG | + | chr8.4:71058152-71058171 | MS.gene81077:CDS | 55.0% | |
| CAAACCCAAACAACGCGCAC+GGG | + | chr8.4:71057834-71057853 | MS.gene81077:CDS | 55.0% | |
| CCAGGGGTTCCCATTATCGT+TGG | - | chr8.4:71057958-71057977 | None:intergenic | 55.0% | |
| CGCTTACGCCGCCTATTGAT+GGG | + | chr8.4:71058229-71058248 | MS.gene81077:CDS | 55.0% | |
| GAAGCATAGGGCGAGACAAG+CGG | + | chr8.4:71058089-71058108 | MS.gene81077:CDS | 55.0% | |
| GAGGCTGCTGATAGGATCAG+TGG | + | chr8.4:71058270-71058289 | MS.gene81077:CDS | 55.0% | |
| ! | CGGCGGAGACGAATCTTTTG+AGG | + | chr8.4:71058109-71058128 | MS.gene81077:CDS | 55.0% |
| ! | GAAGGAAGCTGCTTTGGTGC+CGG | + | chr8.4:71058170-71058189 | MS.gene81077:CDS | 55.0% |
| ! | GCCGGATTTTACGCCGTTTC+CGG | + | chr8.4:71058188-71058207 | MS.gene81077:CDS | 55.0% |
| !! | CCAACGATAATGGGAACCCC+TGG | + | chr8.4:71057955-71057974 | MS.gene81077:CDS | 55.0% |
| !! | GAAGCGGTGTTGGTGCATTG+AGG | - | chr8.4:71057807-71057826 | None:intergenic | 55.0% |
| !! | GATAATGGGAACCCCTGGGT+TGG | + | chr8.4:71057960-71057979 | MS.gene81077:CDS | 55.0% |
| AGCCGCACCGCCAAAGGAAA+AGG | + | chr8.4:71057658-71057677 | MS.gene81077:CDS | 60.0% | |
| AGCTTCCCGTGCGCGTTGTT+TGG | - | chr8.4:71057842-71057861 | None:intergenic | 60.0% | |
| GCAGCTTCCTTCAAACCCCC+AGG | - | chr8.4:71058162-71058181 | None:intergenic | 60.0% | |
| GCTTCCCGTGCGCGTTGTTT+GGG | - | chr8.4:71057841-71057860 | None:intergenic | 60.0% | |
| GTTTCTCGCGGGATCCGGTT+GGG | - | chr8.4:71057756-71057775 | None:intergenic | 60.0% | |
| TGTTTCTCGCGGGATCCGGT+TGG | - | chr8.4:71057757-71057776 | None:intergenic | 60.0% | |
| TTTCTCGCGGGATCCGGTTG+GGG | - | chr8.4:71057755-71057774 | None:intergenic | 60.0% | |
| ! | TGGTGCGGTGAAGATGACGG+TGG | - | chr8.4:71057616-71057635 | None:intergenic | 60.0% |
| !! | CAGCGTTGGAGGAGTTGGTG+CGG | - | chr8.4:71057631-71057650 | None:intergenic | 60.0% |
| GCATAGGGCGAGACAAGCGG+CGG | + | chr8.4:71058092-71058111 | MS.gene81077:CDS | 65.0% | |
| TCCAGGTGTGGGTTCGGACC+CGG | - | chr8.4:71057731-71057750 | None:intergenic | 65.0% | |
| TCCTTTGGCGGTGCGGCTGA+CGG | - | chr8.4:71057656-71057675 | None:intergenic | 65.0% | |
| TGGGGCTCCAGGTGTGGGTT+CGG | - | chr8.4:71057737-71057756 | None:intergenic | 65.0% | |
| ! | CGGAGCAGCGTTGGAGGAGT+TGG | - | chr8.4:71057636-71057655 | None:intergenic | 65.0% |
| ACCGGGTCCGAACCCACACC+TGG | + | chr8.4:71057727-71057746 | MS.gene81077:CDS | 70.0% | |
| CCCACACCTGGAGCCCCAAC+CGG | + | chr8.4:71057739-71057758 | MS.gene81077:CDS | 70.0% | |
| CCGGTTGGGGCTCCAGGTGT+GGG | - | chr8.4:71057742-71057761 | None:intergenic | 70.0% | |
| TCCGGTTGGGGCTCCAGGTG+TGG | - | chr8.4:71057743-71057762 | None:intergenic | 70.0% | |
| TCCGTCAGCCGCACCGCCAA+AGG | + | chr8.4:71057652-71057671 | MS.gene81077:CDS | 70.0% | |
| TGCGGCTGACGGAGCAGCGT+TGG | - | chr8.4:71057645-71057664 | None:intergenic | 70.0% | |
| ! | GGCTGACGGAGCAGCGTTGG+AGG | - | chr8.4:71057642-71057661 | None:intergenic | 70.0% |
| CGGGATCCGGTTGGGGCTCC+AGG | - | chr8.4:71057748-71057767 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 71057589 | 71058311 | 71057589 | ID=MS.gene81077 |
| chr8.4 | mRNA | 71057589 | 71058311 | 71057589 | ID=MS.gene81077.t1;Parent=MS.gene81077 |
| chr8.4 | exon | 71057589 | 71058311 | 71057589 | ID=MS.gene81077.t1.exon1;Parent=MS.gene81077.t1 |
| chr8.4 | CDS | 71057589 | 71058311 | 71057589 | ID=cds.MS.gene81077.t1;Parent=MS.gene81077.t1 |
| Gene Sequence |
| Protein sequence |
