Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59614.t1 | XP_024628287.1 | 96.7 | 243 | 8 | 0 | 1 | 243 | 1 | 243 | 2.60E-123 | 451.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59614.t1 | A0A396GM52 | 96.7 | 243 | 8 | 0 | 1 | 243 | 1 | 243 | 1.9e-123 | 451.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049404 | MS.gene59614 | 0.813668 | 2.28E-51 | -1.69E-46 |
| MS.gene049501 | MS.gene59614 | 0.802553 | 5.31E-49 | -1.69E-46 |
| MS.gene049821 | MS.gene59614 | 0.825084 | 5.68E-54 | -1.69E-46 |
| MS.gene051198 | MS.gene59614 | 0.830526 | 2.79E-55 | -1.69E-46 |
| MS.gene051247 | MS.gene59614 | 0.801154 | 1.03E-48 | -1.69E-46 |
| MS.gene051279 | MS.gene59614 | 0.807071 | 6.05E-50 | -1.69E-46 |
| MS.gene052582 | MS.gene59614 | 0.821477 | 3.95E-53 | -1.69E-46 |
| MS.gene052584 | MS.gene59614 | 0.829886 | 4.00E-55 | -1.69E-46 |
| MS.gene053226 | MS.gene59614 | 0.804047 | 2.61E-49 | -1.69E-46 |
| MS.gene054651 | MS.gene59614 | 0.805003 | 1.65E-49 | -1.69E-46 |
| MS.gene055465 | MS.gene59614 | 0.814131 | 1.80E-51 | -1.69E-46 |
| MS.gene055466 | MS.gene59614 | 0.823515 | 1.33E-53 | -1.69E-46 |
| MS.gene055468 | MS.gene59614 | 0.815221 | 1.03E-51 | -1.69E-46 |
| MS.gene056308 | MS.gene59614 | 0.802067 | 6.69E-49 | -1.69E-46 |
| MS.gene057314 | MS.gene59614 | 0.803743 | 3.01E-49 | -1.69E-46 |
| MS.gene057414 | MS.gene59614 | 0.801788 | 7.63E-49 | -1.69E-46 |
| MS.gene057444 | MS.gene59614 | 0.831427 | 1.68E-55 | -1.69E-46 |
| MS.gene059625 | MS.gene59614 | 0.815476 | 9.07E-52 | -1.69E-46 |
| MS.gene060429 | MS.gene59614 | 0.816327 | 5.86E-52 | -1.69E-46 |
| MS.gene060603 | MS.gene59614 | 0.809868 | 1.53E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene59614 | MS.gene81078 | PPI |
| MS.gene59614 | MS.gene92136 | PPI |
| MS.gene59614 | MS.gene98177 | PPI |
| MS.gene59614 | MS.gene81077 | PPI |
| MS.gene59614 | MS.gene08498 | PPI |
| MS.gene59614 | MS.gene79714 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59614.t1 | MTR_8g023960 | 94.650 | 243 | 10 | 1 | 1 | 243 | 57 | 296 | 1.36e-165 | 459 |
| MS.gene59614.t1 | MTR_8g023960 | 94.650 | 243 | 10 | 1 | 1 | 243 | 1 | 240 | 4.31e-165 | 456 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene59614.t1 | AT4G05400 | 56.078 | 255 | 95 | 5 | 1 | 243 | 1 | 250 | 2.33e-88 | 262 |
| MS.gene59614.t1 | AT4G05400 | 56.078 | 255 | 95 | 5 | 1 | 243 | 1 | 250 | 2.33e-88 | 262 |
| MS.gene59614.t1 | AT4G05400 | 56.078 | 255 | 95 | 5 | 1 | 243 | 1 | 250 | 2.33e-88 | 262 |
| MS.gene59614.t1 | AT4G21140 | 55.061 | 247 | 103 | 5 | 1 | 243 | 1 | 243 | 1.16e-74 | 227 |
Find 72 sgRNAs with CRISPR-Local
Find 87 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCGGATTTGACTCCGTTTC+CGG | 0.238916 | 8.1:-73605784 | MS.gene59614:CDS |
| GAAGCTGAACGAGAGAAATT+AGG | 0.242522 | 8.1:-73606116 | MS.gene59614:CDS |
| GTTTCCGGTGAATAGGTTTA+TGG | 0.264318 | 8.1:-73605769 | MS.gene59614:CDS |
| ACCAGTTGGGGCTCCGGATG+TGG | 0.279909 | 8.1:+73606232 | None:intergenic |
| TCTTTCGTCAATTCATATTT+CGG | 0.289163 | 8.1:+73605951 | None:intergenic |
| AGCTTCGCGTGCACGTTGTT+TGG | 0.290006 | 8.1:+73606133 | None:intergenic |
| TTCTGAGAAACCAACGATAA+TGG | 0.292493 | 8.1:-73606027 | MS.gene59614:CDS |
| GTTTCTCGCGGGAACCAGTT+GGG | 0.347840 | 8.1:+73606219 | None:intergenic |
| GCTTCGCGTGCACGTTGTTT+GGG | 0.366189 | 8.1:+73606134 | None:intergenic |
| TGGGGCTCCGGATGTGGGTT+CGG | 0.366533 | 8.1:+73606238 | None:intergenic |
| GGTTTGGATTATATAACGTT+AGG | 0.370627 | 8.1:-73605996 | MS.gene59614:CDS |
| GATAATGGGAACACCTGGTT+TGG | 0.375812 | 8.1:-73606012 | MS.gene59614:CDS |
| TCAGTGGGAAGGAGAAGATT+AGG | 0.382186 | 8.1:-73605686 | MS.gene59614:CDS |
| GAAAGAAGATGGGATGAAAT+TGG | 0.382332 | 8.1:-73605934 | MS.gene59614:CDS |
| AGGTTTGAAGGAAGCTGCTT+TGG | 0.388226 | 8.1:-73605808 | MS.gene59614:CDS |
| TTATATAACGTTAGGGTTAG+TGG | 0.388954 | 8.1:-73605988 | MS.gene59614:CDS |
| TCCTTTGGCGGTGCGGCTGA+CGG | 0.396279 | 8.1:+73606319 | None:intergenic |
| TGACTCCGTTTCCGGTGAAT+AGG | 0.396696 | 8.1:-73605776 | MS.gene59614:CDS |
| TCCGGATGTGGGTTCGGATC+CGG | 0.397530 | 8.1:+73606244 | None:intergenic |
| AATTGGCGAAGGAGTATAGT+AGG | 0.407802 | 8.1:-73605917 | MS.gene59614:CDS |
| TCTGAGAAACCAACGATAAT+GGG | 0.408601 | 8.1:-73606026 | MS.gene59614:CDS |
| AAGCTGAACGAGAGAAATTA+GGG | 0.425043 | 8.1:-73606115 | MS.gene59614:CDS |
| AGCCGCACCGCCAAAGGAAA+AGG | 0.428181 | 8.1:-73606314 | MS.gene59614:CDS |
| CCCACATCCGGAGCCCCAAC+TGG | 0.437112 | 8.1:-73606233 | MS.gene59614:CDS |
| TATGAATTGACGAAAGAAGA+TGG | 0.442226 | 8.1:-73605945 | MS.gene59614:CDS |
| TGGGTATATTGAGAAGATTA+AGG | 0.447659 | 8.1:-73605724 | MS.gene59614:CDS |
| AGCTTTACCTGGAGGTTTGA+AGG | 0.450403 | 8.1:-73605820 | MS.gene59614:CDS |
| TGTTTCTCGCGGGAACCAGT+TGG | 0.454283 | 8.1:+73606218 | None:intergenic |
| CCAGTTGGGGCTCCGGATGT+GGG | 0.456017 | 8.1:+73606233 | None:intergenic |
| ATAAACCTATTCACCGGAAA+CGG | 0.456384 | 8.1:+73605771 | None:intergenic |
| CGGAGCAGCGTTGGAGGAGT+TGG | 0.459479 | 8.1:+73606339 | None:intergenic |
| TGCGGCTGACGGAGCAGCGT+TGG | 0.460867 | 8.1:+73606330 | None:intergenic |
| GCGGGAACCAGTTGGGGCTC+CGG | 0.461594 | 8.1:+73606226 | None:intergenic |
| AGATTAAGGAGGCTGCTGAT+AGG | 0.463125 | 8.1:-73605710 | MS.gene59614:CDS |
| GTTTGGATTATATAACGTTA+GGG | 0.470062 | 8.1:-73605995 | MS.gene59614:CDS |
| TTCTCAATATACCCATCAAT+AGG | 0.473537 | 8.1:+73605732 | None:intergenic |
| GAAGGAAGCTGCTTTGGTGC+CGG | 0.473891 | 8.1:-73605802 | MS.gene59614:CDS |
| GAGGCAATTGAAGCTTTACC+TGG | 0.482431 | 8.1:-73605831 | MS.gene59614:CDS |
| GGCTGACGGAGCAGCGTTGG+AGG | 0.488541 | 8.1:+73606333 | None:intergenic |
| ACCGGAAACGGAGTCAAATC+CGG | 0.495763 | 8.1:+73605783 | None:intergenic |
| TTTCTCGCGGGAACCAGTTG+GGG | 0.496436 | 8.1:+73606220 | None:intergenic |
| ACGCTTACGCCACCTATTGA+TGG | 0.498561 | 8.1:-73605744 | MS.gene59614:CDS |
| ACCGGATCCGAACCCACATC+CGG | 0.501666 | 8.1:-73606245 | MS.gene59614:CDS |
| TTCGCGTTCTTGTTTCTCGC+GGG | 0.513895 | 8.1:+73606208 | None:intergenic |
| ATGAATTGACGAAAGAAGAT+GGG | 0.521993 | 8.1:-73605944 | MS.gene59614:CDS |
| TCCGTCAGCCGCACCGCCAA+AGG | 0.523259 | 8.1:-73606320 | MS.gene59614:CDS |
| GCCAAAGGAAAAGGAAAAGC+CGG | 0.524257 | 8.1:-73606305 | MS.gene59614:CDS |
| CATCCTCAAAAGATTCGTCT+CGG | 0.529672 | 8.1:+73605860 | None:intergenic |
| CCAGGTGTTCCCATTATCGT+TGG | 0.533219 | 8.1:+73606017 | None:intergenic |
| CGCTTACGCCACCTATTGAT+GGG | 0.534577 | 8.1:-73605743 | MS.gene59614:CDS |
| GCAGCTTCCTTCAAACCTCC+AGG | 0.536551 | 8.1:+73605813 | None:intergenic |
| GTTCGCGTTCTTGTTTCTCG+CGG | 0.547502 | 8.1:+73606207 | None:intergenic |
| ATTGGCGAAGGAGTATAGTA+GGG | 0.549849 | 8.1:-73605916 | MS.gene59614:CDS |
| CCAACGATAATGGGAACACC+TGG | 0.558342 | 8.1:-73606017 | MS.gene59614:CDS |
| TTGAGAAAACGAAGTGGTGT+TGG | 0.571375 | 8.1:+73606158 | None:intergenic |
| AGATGGGATGAAATTGGCGA+AGG | 0.597418 | 8.1:-73605928 | MS.gene59614:CDS |
| GAAGCATAGGGCGAGACAAG+CGG | 0.597439 | 8.1:-73605883 | MS.gene59614:CDS |
| TGCTGATAGGATCAGTGGGA+AGG | 0.607298 | 8.1:-73605697 | MS.gene59614:CDS |
| GGTGAAGATGACAGTGGTGA+TGG | 0.610256 | 8.1:+73606365 | None:intergenic |
| GAGGCTGCTGATAGGATCAG+TGG | 0.610487 | 8.1:-73605702 | MS.gene59614:CDS |
| GTCGCCATAAACCTATTCAC+CGG | 0.613259 | 8.1:+73605765 | None:intergenic |
| AGGCTGCTGATAGGATCAGT+GGG | 0.618985 | 8.1:-73605701 | MS.gene59614:CDS |
| CAGCGTTGGAGGAGTTGGTG+CGG | 0.641635 | 8.1:+73606344 | None:intergenic |
| TCAATATACCCATCAATAGG+TGG | 0.649441 | 8.1:+73605735 | None:intergenic |
| GCAATTGAAGCTTTACCTGG+AGG | 0.659327 | 8.1:-73605828 | MS.gene59614:CDS |
| CGTTGAGGCATTGATCGTAG+AGG | 0.672109 | 8.1:+73606183 | None:intergenic |
| AACGTTATATAATCCAAACC+AGG | 0.673172 | 8.1:+73605999 | None:intergenic |
| GAAGATGACAGTGGTGATGG+TGG | 0.683610 | 8.1:+73606368 | None:intergenic |
| GTATATTGAGAAGATTAAGG+AGG | 0.685736 | 8.1:-73605721 | MS.gene59614:CDS |
| TTGGGTTTGAGAAAACGAAG+TGG | 0.743892 | 8.1:+73606152 | None:intergenic |
| GAAGTGGTGTTGGTGCGTTG+AGG | 0.759588 | 8.1:+73606168 | None:intergenic |
| TGGTGCGGTGAAGATGACAG+TGG | 0.785449 | 8.1:+73606359 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | AAAATCACTGTCAAAAAAAC+CGG | - | chr8.1:73605812-73605831 | MS.gene59614:CDS | 25.0% |
| ! | GTTTGGATTATATAACGTTA+GGG | - | chr8.1:73606080-73606099 | MS.gene59614:CDS | 25.0% |
| ! | TCTTTCGTCAATTCATATTT+CGG | + | chr8.1:73606127-73606146 | None:intergenic | 25.0% |
| AACGTTATATAATCCAAACC+AGG | + | chr8.1:73606079-73606098 | None:intergenic | 30.0% | |
| ATGAATTGACGAAAGAAGAT+GGG | - | chr8.1:73606131-73606150 | MS.gene59614:CDS | 30.0% | |
| GGTTTGGATTATATAACGTT+AGG | - | chr8.1:73606079-73606098 | MS.gene59614:CDS | 30.0% | |
| GTATATTGAGAAGATTAAGG+AGG | - | chr8.1:73606354-73606373 | MS.gene59614:CDS | 30.0% | |
| TATGAATTGACGAAAGAAGA+TGG | - | chr8.1:73606130-73606149 | MS.gene59614:CDS | 30.0% | |
| TGGGTATATTGAGAAGATTA+AGG | - | chr8.1:73606351-73606370 | MS.gene59614:CDS | 30.0% | |
| TTATATAACGTTAGGGTTAG+TGG | - | chr8.1:73606087-73606106 | MS.gene59614:CDS | 30.0% | |
| TTCTCAATATACCCATCAAT+AGG | + | chr8.1:73606346-73606365 | None:intergenic | 30.0% | |
| !! | GAATCTTTTGAGGATGAAAA+AGG | - | chr8.1:73606222-73606241 | MS.gene59614:CDS | 30.0% |
| !!! | GGTTTTTTTGACAGTGATTT+TGG | + | chr8.1:73605813-73605832 | None:intergenic | 30.0% |
| AAGCTGAACGAGAGAAATTA+GGG | - | chr8.1:73605960-73605979 | MS.gene59614:CDS | 35.0% | |
| AGAAGAAAAACGCGAAGTTT+AGG | - | chr8.1:73606023-73606042 | MS.gene59614:CDS | 35.0% | |
| ATAAACCTATTCACCGGAAA+CGG | + | chr8.1:73606307-73606326 | None:intergenic | 35.0% | |
| GAAAGAAGATGGGATGAAAT+TGG | - | chr8.1:73606141-73606160 | MS.gene59614:CDS | 35.0% | |
| GAAGAAAAACGCGAAGTTTA+GGG | - | chr8.1:73606024-73606043 | MS.gene59614:CDS | 35.0% | |
| TCAATATACCCATCAATAGG+TGG | + | chr8.1:73606343-73606362 | None:intergenic | 35.0% | |
| TCTGAGAAACCAACGATAAT+GGG | - | chr8.1:73606049-73606068 | MS.gene59614:CDS | 35.0% | |
| ! | TTCTGAGAAACCAACGATAA+TGG | - | chr8.1:73606048-73606067 | MS.gene59614:CDS | 35.0% |
| !! | AGTATAGTAGGGTTTTGATG+AGG | - | chr8.1:73606170-73606189 | MS.gene59614:CDS | 35.0% |
| !! | TCTTTTGAGGATGAAAAAGG+AGG | - | chr8.1:73606225-73606244 | MS.gene59614:CDS | 35.0% |
| !!! | CAGTGATTTTGGAACGTTTT+AGG | + | chr8.1:73605802-73605821 | None:intergenic | 35.0% |
| CATCCTCAAAAGATTCGTCT+CGG | + | chr8.1:73606218-73606237 | None:intergenic | 40.0% | |
| GAAGCTGAACGAGAGAAATT+AGG | - | chr8.1:73605959-73605978 | MS.gene59614:CDS | 40.0% | |
| GTTTCCGGTGAATAGGTTTA+TGG | - | chr8.1:73606306-73606325 | MS.gene59614:CDS | 40.0% | |
| TTGAGAAAACGAAGTGGTGT+TGG | + | chr8.1:73605920-73605939 | None:intergenic | 40.0% | |
| TTGGGTTTGAGAAAACGAAG+TGG | + | chr8.1:73605926-73605945 | None:intergenic | 40.0% | |
| ! | AATTGGCGAAGGAGTATAGT+AGG | - | chr8.1:73606158-73606177 | MS.gene59614:CDS | 40.0% |
| ! | ATTGGCGAAGGAGTATAGTA+GGG | - | chr8.1:73606159-73606178 | MS.gene59614:CDS | 40.0% |
| !! | GGTTTTGATGAGGAAGCATA+GGG | - | chr8.1:73606180-73606199 | MS.gene59614:CDS | 40.0% |
| !!! | GGAACGTTTTAGGATTTGAC+CGG | + | chr8.1:73605792-73605811 | None:intergenic | 40.0% |
| AGATGGGATGAAATTGGCGA+AGG | - | chr8.1:73606147-73606166 | MS.gene59614:CDS | 45.0% | |
| AGATTAAGGAGGCTGCTGAT+AGG | - | chr8.1:73606365-73606384 | MS.gene59614:CDS | 45.0% | |
| AGCTTTACCTGGAGGTTTGA+AGG | - | chr8.1:73606255-73606274 | MS.gene59614:CDS | 45.0% | |
| AGGTTTGAAGGAAGCTGCTT+TGG | - | chr8.1:73606267-73606286 | MS.gene59614:CDS | 45.0% | |
| GAGGCAATTGAAGCTTTACC+TGG | - | chr8.1:73606244-73606263 | MS.gene59614:CDS | 45.0% | |
| GCAATTGAAGCTTTACCTGG+AGG | - | chr8.1:73606247-73606266 | MS.gene59614:CDS | 45.0% | |
| GCCAAAGGAAAAGGAAAAGC+CGG | - | chr8.1:73605770-73605789 | MS.gene59614:CDS | 45.0% | |
| GTCGCCATAAACCTATTCAC+CGG | + | chr8.1:73606313-73606332 | None:intergenic | 45.0% | |
| TCAGTGGGAAGGAGAAGATT+AGG | - | chr8.1:73606389-73606408 | MS.gene59614:CDS | 45.0% | |
| ! | GGCTTTTCCTTTTCCTTTGG+CGG | + | chr8.1:73605771-73605790 | None:intergenic | 45.0% |
| !! | ACCGGCTTTTCCTTTTCCTT+TGG | + | chr8.1:73605774-73605793 | None:intergenic | 45.0% |
| !! | GATAATGGGAACACCTGGTT+TGG | - | chr8.1:73606063-73606082 | MS.gene59614:CDS | 45.0% |
| !! | GGGTTTTGATGAGGAAGCAT+AGG | - | chr8.1:73606179-73606198 | MS.gene59614:CDS | 45.0% |
| ACCGGAAACGGAGTCAAATC+CGG | + | chr8.1:73606295-73606314 | None:intergenic | 50.0% | |
| ACGCTTACGCCACCTATTGA+TGG | - | chr8.1:73606331-73606350 | MS.gene59614:CDS | 50.0% | |
| AGGCTGCTGATAGGATCAGT+GGG | - | chr8.1:73606374-73606393 | MS.gene59614:CDS | 50.0% | |
| CCAGGTGTTCCCATTATCGT+TGG | + | chr8.1:73606061-73606080 | None:intergenic | 50.0% | |
| CGCTTACGCCACCTATTGAT+GGG | - | chr8.1:73606332-73606351 | MS.gene59614:CDS | 50.0% | |
| GGTGAAGATGACAGTGGTGA+TGG | + | chr8.1:73605713-73605732 | None:intergenic | 50.0% | |
| TGACTCCGTTTCCGGTGAAT+AGG | - | chr8.1:73606299-73606318 | MS.gene59614:CDS | 50.0% | |
| TGCTGATAGGATCAGTGGGA+AGG | - | chr8.1:73606378-73606397 | MS.gene59614:CDS | 50.0% | |
| ! | GTTCGCGTTCTTGTTTCTCG+CGG | + | chr8.1:73605871-73605890 | None:intergenic | 50.0% |
| ! | TTCCTTTTCCTTTGGCGGTG+CGG | + | chr8.1:73605766-73605785 | None:intergenic | 50.0% |
| ! | TTCGCGTTCTTGTTTCTCGC+GGG | + | chr8.1:73605870-73605889 | None:intergenic | 50.0% |
| !! | CCAACGATAATGGGAACACC+TGG | - | chr8.1:73606058-73606077 | MS.gene59614:CDS | 50.0% |
| !! | CGTTGAGGCATTGATCGTAG+AGG | + | chr8.1:73605895-73605914 | None:intergenic | 50.0% |
| !! | GAAGATGACAGTGGTGATGG+TGG | + | chr8.1:73605710-73605729 | None:intergenic | 50.0% |
| AGCTTCGCGTGCACGTTGTT+TGG | + | chr8.1:73605945-73605964 | None:intergenic | 55.0% | |
| GAAGCATAGGGCGAGACAAG+CGG | - | chr8.1:73606192-73606211 | MS.gene59614:CDS | 55.0% | |
| GAGGCTGCTGATAGGATCAG+TGG | - | chr8.1:73606373-73606392 | MS.gene59614:CDS | 55.0% | |
| GCAGCTTCCTTCAAACCTCC+AGG | + | chr8.1:73606265-73606284 | None:intergenic | 55.0% | |
| GCCGGATTTGACTCCGTTTC+CGG | - | chr8.1:73606291-73606310 | MS.gene59614:CDS | 55.0% | |
| GCTTCGCGTGCACGTTGTTT+GGG | + | chr8.1:73605944-73605963 | None:intergenic | 55.0% | |
| GTTTCTCGCGGGAACCAGTT+GGG | + | chr8.1:73605859-73605878 | None:intergenic | 55.0% | |
| TGGTGCGGTGAAGATGACAG+TGG | + | chr8.1:73605719-73605738 | None:intergenic | 55.0% | |
| TGTTTCTCGCGGGAACCAGT+TGG | + | chr8.1:73605860-73605879 | None:intergenic | 55.0% | |
| TTTCTCGCGGGAACCAGTTG+GGG | + | chr8.1:73605858-73605877 | None:intergenic | 55.0% | |
| ! | CGGCCGAGACGAATCTTTTG+AGG | - | chr8.1:73606212-73606231 | MS.gene59614:CDS | 55.0% |
| ! | GAAGGAAGCTGCTTTGGTGC+CGG | - | chr8.1:73606273-73606292 | MS.gene59614:CDS | 55.0% |
| !! | GAAGTGGTGTTGGTGCGTTG+AGG | + | chr8.1:73605910-73605929 | None:intergenic | 55.0% |
| ACCGGATCCGAACCCACATC+CGG | - | chr8.1:73605830-73605849 | MS.gene59614:CDS | 60.0% | |
| AGCCGCACCGCCAAAGGAAA+AGG | - | chr8.1:73605761-73605780 | MS.gene59614:CDS | 60.0% | |
| TCCGGATGTGGGTTCGGATC+CGG | + | chr8.1:73605834-73605853 | None:intergenic | 60.0% | |
| !! | CAGCGTTGGAGGAGTTGGTG+CGG | + | chr8.1:73605734-73605753 | None:intergenic | 60.0% |
| ACCAGTTGGGGCTCCGGATG+TGG | + | chr8.1:73605846-73605865 | None:intergenic | 65.0% | |
| CCAGTTGGGGCTCCGGATGT+GGG | + | chr8.1:73605845-73605864 | None:intergenic | 65.0% | |
| TCCTTTGGCGGTGCGGCTGA+CGG | + | chr8.1:73605759-73605778 | None:intergenic | 65.0% | |
| TGGGGCTCCGGATGTGGGTT+CGG | + | chr8.1:73605840-73605859 | None:intergenic | 65.0% | |
| ! | CGGAGCAGCGTTGGAGGAGT+TGG | + | chr8.1:73605739-73605758 | None:intergenic | 65.0% |
| CCCACATCCGGAGCCCCAAC+TGG | - | chr8.1:73605842-73605861 | MS.gene59614:CDS | 70.0% | |
| GCGGGAACCAGTTGGGGCTC+CGG | + | chr8.1:73605852-73605871 | None:intergenic | 70.0% | |
| TCCGTCAGCCGCACCGCCAA+AGG | - | chr8.1:73605755-73605774 | MS.gene59614:CDS | 70.0% | |
| TGCGGCTGACGGAGCAGCGT+TGG | + | chr8.1:73605748-73605767 | None:intergenic | 70.0% | |
| ! | GGCTGACGGAGCAGCGTTGG+AGG | + | chr8.1:73605745-73605764 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.1 | gene | 73605683 | 73606414 | 73605683 | ID=MS.gene59614 |
| chr8.1 | mRNA | 73605683 | 73606414 | 73605683 | ID=MS.gene59614.t1;Parent=MS.gene59614 |
| chr8.1 | exon | 73605683 | 73606414 | 73605683 | ID=MS.gene59614.t1.exon1;Parent=MS.gene59614.t1 |
| chr8.1 | CDS | 73605683 | 73606414 | 73605683 | ID=cds.MS.gene59614.t1;Parent=MS.gene59614.t1 |
| Gene Sequence |
| Protein sequence |
