Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08551.t1 | XP_003629722.2 | 85.6 | 334 | 44 | 1 | 1 | 330 | 1 | 334 | 1.70E-93 | 352.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08551.t1 | Q9Y3A4 | 37.0 | 138 | 77 | 4 | 196 | 330 | 150 | 280 | 2.4e-11 | 71.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08551.t1 | G7LIM3 | 85.6 | 334 | 44 | 1 | 1 | 330 | 1 | 334 | 1.2e-93 | 352.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene05188 | MS.gene08551 | 0.841775 | 3.87E-58 | -1.69E-46 |
| MS.gene051975 | MS.gene08551 | 0.806511 | 7.94E-50 | -1.69E-46 |
| MS.gene052434 | MS.gene08551 | 0.803744 | 3.01E-49 | -1.69E-46 |
| MS.gene052947 | MS.gene08551 | 0.813365 | 2.66E-51 | -1.69E-46 |
| MS.gene05517 | MS.gene08551 | 0.818522 | 1.88E-52 | -1.69E-46 |
| MS.gene056215 | MS.gene08551 | 0.820608 | 6.27E-53 | -1.69E-46 |
| MS.gene056403 | MS.gene08551 | 0.808172 | 3.53E-50 | -1.69E-46 |
| MS.gene056605 | MS.gene08551 | 0.818556 | 1.84E-52 | -1.69E-46 |
| MS.gene056986 | MS.gene08551 | 0.817102 | 3.92E-52 | -1.69E-46 |
| MS.gene06010 | MS.gene08551 | 0.804168 | 2.46E-49 | -1.69E-46 |
| MS.gene06011 | MS.gene08551 | 0.820804 | 5.65E-53 | -1.69E-46 |
| MS.gene060429 | MS.gene08551 | 0.829891 | 3.99E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08551.t1 | MTR_8g085800 | 89.521 | 334 | 31 | 1 | 1 | 330 | 1 | 334 | 0.0 | 596 |
| MS.gene08551.t1 | MTR_4g051625 | 74.670 | 379 | 45 | 4 | 1 | 330 | 1 | 377 | 0.0 | 529 |
| MS.gene08551.t1 | MTR_4g051625 | 80.539 | 334 | 59 | 3 | 1 | 330 | 1 | 332 | 0.0 | 514 |
| MS.gene08551.t1 | MTR_1g090650 | 79.618 | 157 | 32 | 0 | 174 | 330 | 32 | 188 | 1.51e-87 | 261 |
| MS.gene08551.t1 | MTR_8g085830 | 63.636 | 99 | 9 | 2 | 232 | 330 | 2 | 73 | 3.59e-32 | 115 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08551.t1 | AT5G38720 | 65.101 | 149 | 51 | 1 | 183 | 330 | 165 | 313 | 8.34e-69 | 218 |
| MS.gene08551.t1 | AT5G38720 | 65.101 | 149 | 51 | 1 | 183 | 330 | 158 | 306 | 9.57e-69 | 217 |
| MS.gene08551.t1 | AT5G38720 | 65.101 | 149 | 51 | 1 | 183 | 330 | 177 | 325 | 4.92e-68 | 216 |
Find 50 sgRNAs with CRISPR-Local
Find 283 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTTTATAATCTCCATTTC+AGG | 0.169996 | 4.3:-15051067 | None:intergenic |
| ATCAGAATCTCTACGCTTCT+TGG | 0.250763 | 4.3:-15051337 | None:intergenic |
| AAATCAACTTCTTCATCTTC+TGG | 0.256960 | 4.3:-15051160 | None:intergenic |
| AAAGTTAGTAAAGGAGAAAA+AGG | 0.308720 | 4.3:+15050622 | MS.gene08551:CDS |
| AGCTGCTGCAGAAAATAAAT+TGG | 0.319112 | 4.3:+15053967 | MS.gene08551:CDS |
| GCAATCAACATCATTTAATA+AGG | 0.321323 | 4.3:-15054723 | None:intergenic |
| GTTGATTTAGAAGAGCAAAA+TGG | 0.351385 | 4.3:+15051175 | MS.gene08551:CDS |
| TCCTGAAATGGAGATTATAA+AGG | 0.363253 | 4.3:+15051066 | MS.gene08551:CDS |
| GACATTCATATTATTTCCTC+TGG | 0.367904 | 4.3:+15051565 | MS.gene08551:CDS |
| CCAACCCTGGTCTACTTTGA+TGG | 0.384521 | 4.3:-15052058 | None:intergenic |
| AAGCCACCACTAATCGAAAA+AGG | 0.413000 | 4.3:+15051101 | MS.gene08551:CDS |
| GGAGATGATGACTGCTCAAA+TGG | 0.443319 | 4.3:+15051586 | MS.gene08551:CDS |
| AAAAGAGAAGCTCAGAGAAA+TGG | 0.446445 | 4.3:+15054037 | MS.gene08551:CDS |
| AAAGAGAGAACAAAATCATC+AGG | 0.460936 | 4.3:+15051540 | MS.gene08551:CDS |
| TCCTTTACTAACTTTCATCA+TGG | 0.465522 | 4.3:-15050614 | None:intergenic |
| CCTGAAATGGAGATTATAAA+GGG | 0.465886 | 4.3:+15051067 | MS.gene08551:CDS |
| TGTTTCAGTGGATCCTGAAA+TGG | 0.466212 | 4.3:+15051054 | MS.gene08551:intron |
| TCCATCCTCCTTCTGCAGCA+AGG | 0.468377 | 4.3:-15053868 | None:intergenic |
| CATGTCAAGATGAACAATAA+TGG | 0.472762 | 4.3:+15050709 | MS.gene08551:CDS |
| AAGTGGGATTGCTGTGGGCT+CGG | 0.474663 | 4.3:+15053937 | MS.gene08551:CDS |
| CCATCCTCCTTCTGCAGCAA+GGG | 0.496362 | 4.3:-15053867 | None:intergenic |
| CGCTGAAAGTGGGATTGCTG+TGG | 0.507910 | 4.3:+15053931 | MS.gene08551:CDS |
| GCCATGATGAAAGTTAGTAA+AGG | 0.525855 | 4.3:+15050613 | None:intergenic |
| AAAACTACTGACGCTGAAAG+TGG | 0.530432 | 4.3:+15053920 | MS.gene08551:CDS |
| CCATCAAAGTAGACCAGGGT+TGG | 0.532437 | 4.3:+15052058 | MS.gene08551:CDS |
| TGTTGCAAAACCTCCAACCC+TGG | 0.543861 | 4.3:-15052071 | None:intergenic |
| CCCTTGCTGCAGAAGGAGGA+TGG | 0.545811 | 4.3:+15053867 | MS.gene08551:CDS |
| GGAACTGCAGAGCAAATTTG+AGG | 0.547063 | 4.3:+15054653 | MS.gene08551:CDS |
| TCAAACCACAGAGTGGATCA+TGG | 0.547910 | 4.3:+15052031 | MS.gene08551:intron |
| TCAAAGTAGACCAGGGTTGG+AGG | 0.548210 | 4.3:+15052061 | MS.gene08551:CDS |
| AAAGAAGCCCTTGCTGCAGA+AGG | 0.553866 | 4.3:+15053860 | MS.gene08551:CDS |
| GTTGATTTAGAAGTGCAAAA+CGG | 0.556656 | 4.3:+15050906 | MS.gene08551:CDS |
| TGCTGCAGAAGGAGGATGGA+CGG | 0.572937 | 4.3:+15053871 | MS.gene08551:CDS |
| GAAGCCCTTGCTGCAGAAGG+AGG | 0.575071 | 4.3:+15053863 | MS.gene08551:CDS |
| AAACTACTGACGCTGAAAGT+GGG | 0.579773 | 4.3:+15053921 | MS.gene08551:CDS |
| GCTGAAAGTGGGATTGCTGT+GGG | 0.581833 | 4.3:+15053932 | MS.gene08551:CDS |
| GAATACCATCAAAGTAGACC+AGG | 0.581962 | 4.3:+15052053 | MS.gene08551:CDS |
| TTGTGATTCTAAAGAAGAGA+AGG | 0.583202 | 4.3:+15051305 | MS.gene08551:CDS |
| CCATATATCAGATGGAGTAG+TGG | 0.593466 | 4.3:+15051278 | MS.gene08551:intron |
| TCTAAAGAAGAGAAGGTCAA+AGG | 0.593515 | 4.3:+15051312 | MS.gene08551:CDS |
| GACGGTGGTTCAGCACCACA+AGG | 0.611340 | 4.3:+15053889 | MS.gene08551:CDS |
| TGGTTCAGCACCACAAGGGT+AGG | 0.619462 | 4.3:+15053894 | MS.gene08551:CDS |
| TAGAGATTCTGATATTGAAG+CGG | 0.633558 | 4.3:+15051347 | MS.gene08551:CDS |
| TGCAACAGTTGAGAGCTGCT+AGG | 0.650823 | 4.3:+15054691 | MS.gene08551:CDS |
| TGAGCAGTCATCATCTCCAG+AGG | 0.681253 | 4.3:-15051581 | None:intergenic |
| ACTGCAGAGCAAATTTGAGG+AGG | 0.684181 | 4.3:+15054656 | MS.gene08551:CDS |
| AGAGTTTATATCTACTTACG+AGG | 0.689415 | 4.3:+15052103 | MS.gene08551:CDS |
| TGCAGAAGGAGGATGGACGG+TGG | 0.709610 | 4.3:+15053874 | MS.gene08551:CDS |
| AATACCATCAAAGTAGACCA+GGG | 0.721380 | 4.3:+15052054 | MS.gene08551:CDS |
| ACGGTGGTTCAGCACCACAA+GGG | 0.735362 | 4.3:+15053890 | MS.gene08551:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCAATTTATAATAAAATTCA+TGG | - | chr4.3:15052283-15052302 | None:intergenic | 10.0% |
| !! | TTAATATTTATTGTTATACA+TGG | + | chr4.3:15051946-15051965 | MS.gene08551:intron | 10.0% |
| !!! | TTTTAGTTTAAGAAATATTA+GGG | + | chr4.3:15054288-15054307 | MS.gene08551:intron | 10.0% |
| !! | ATTAAATATACAATAGCATA+TGG | - | chr4.3:15051931-15051950 | None:intergenic | 15.0% |
| !! | TTAAATATACAATAGCATAT+GGG | - | chr4.3:15051930-15051949 | None:intergenic | 15.0% |
| !!! | AATGATTTTTTTTGTAATGT+CGG | + | chr4.3:15051689-15051708 | MS.gene08551:intron | 15.0% |
| !!! | CTTTTAGTTTAAGAAATATT+AGG | + | chr4.3:15054287-15054306 | MS.gene08551:intron | 15.0% |
| !!! | TAAAGGAAATTAATTTTGAA+AGG | - | chr4.3:15053494-15053513 | None:intergenic | 15.0% |
| !! | ATAATTCAGTTTGTATTTGT+AGG | + | chr4.3:15052577-15052596 | MS.gene08551:intron | 20.0% |
| !! | CAAGTTATTATAGTTGTATA+AGG | + | chr4.3:15052436-15052455 | MS.gene08551:intron | 20.0% |
| !! | CTTATACAACTATAATAACT+TGG | - | chr4.3:15052438-15052457 | None:intergenic | 20.0% |
| !! | TAATTCAGTTTGTATTTGTA+GGG | + | chr4.3:15052578-15052597 | MS.gene08551:intron | 20.0% |
| !! | TCATAACTGAATATTGAATA+AGG | - | chr4.3:15053769-15053788 | None:intergenic | 20.0% |
| !! | TTTGCTTAAGTAGAAATATT+TGG | - | chr4.3:15052209-15052228 | None:intergenic | 20.0% |
| !!! | AAAAGTTATTTTCCTTCATA+AGG | + | chr4.3:15052385-15052404 | MS.gene08551:intron | 20.0% |
| !!! | AAAGTTATTTTCCTTCATAA+GGG | + | chr4.3:15052386-15052405 | MS.gene08551:intron | 20.0% |
| !!! | AAATGTGTTATGTTTTTGTA+CGG | + | chr4.3:15050994-15051013 | MS.gene08551:intron | 20.0% |
| !!! | AAATTATATGATTTTATGCG+AGG | + | chr4.3:15054494-15054513 | MS.gene08551:intron | 20.0% |
| !!! | AACAGTTTTGGTTTAAATAA+TGG | + | chr4.3:15054180-15054199 | MS.gene08551:intron | 20.0% |
| !!! | AATAATGGAAGATGTTAATT+AGG | + | chr4.3:15054195-15054214 | MS.gene08551:intron | 20.0% |
| !!! | ATAATGGAAGATGTTAATTA+GGG | + | chr4.3:15054196-15054215 | MS.gene08551:intron | 20.0% |
| !!! | CTTTTACATGTTATTTTTCA+AGG | - | chr4.3:15052370-15052389 | None:intergenic | 20.0% |
| !!! | GTATTTTATGAGTAAGAATA+GGG | + | chr4.3:15052842-15052861 | MS.gene08551:intron | 20.0% |
| !!! | TAAATTTAAACGAACAGTTT+TGG | + | chr4.3:15054168-15054187 | MS.gene08551:intron | 20.0% |
| !!! | TTGTATAATTACTAGTTCTA+TGG | + | chr4.3:15052344-15052363 | MS.gene08551:intron | 20.0% |
| !!! | TTTTTGATGTTGATGTTTTT+TGG | + | chr4.3:15052721-15052740 | MS.gene08551:intron | 20.0% |
| ! | AAACAAAGATAACTTCTATG+AGG | - | chr4.3:15051460-15051479 | None:intergenic | 25.0% |
| ! | AAAGTTAGTAAAGGAGAAAA+AGG | + | chr4.3:15050622-15050641 | MS.gene08551:CDS | 25.0% |
| ! | AGAATAATGCAAAATCATGA+AGG | + | chr4.3:15052886-15052905 | MS.gene08551:intron | 25.0% |
| ! | AGCTAAGAAAAAAAGAAGAA+AGG | + | chr4.3:15051498-15051517 | MS.gene08551:CDS | 25.0% |
| ! | ATCATAGAAACCAAGATATT+AGG | - | chr4.3:15054368-15054387 | None:intergenic | 25.0% |
| ! | CAAAATTAATTTCCTTTAGC+AGG | + | chr4.3:15053496-15053515 | MS.gene08551:intron | 25.0% |
| ! | GAACTTCAACTGAAATAAAT+TGG | + | chr4.3:15051030-15051049 | MS.gene08551:intron | 25.0% |
| ! | GAGAGTAATTGATAGAAATA+TGG | + | chr4.3:15052820-15052839 | MS.gene08551:intron | 25.0% |
| ! | TAAGAAAAAAAGAAGAAAGG+AGG | + | chr4.3:15051501-15051520 | MS.gene08551:CDS | 25.0% |
| ! | TAATGGAAGATGTTAATTAG+GGG | + | chr4.3:15054197-15054216 | MS.gene08551:intron | 25.0% |
| ! | TATCTTGTACACAGTATATA+CGG | - | chr4.3:15050953-15050972 | None:intergenic | 25.0% |
| ! | TCATAGAAACCAAGATATTA+GGG | - | chr4.3:15054367-15054386 | None:intergenic | 25.0% |
| ! | TCATCTACGATATGAATATA+TGG | - | chr4.3:15054089-15054108 | None:intergenic | 25.0% |
| ! | TGGATACTGAATATTGAATA+TGG | - | chr4.3:15053631-15053650 | None:intergenic | 25.0% |
| ! | TTGAGATGAGAGATTATAAA+GGG | - | chr4.3:15053691-15053710 | None:intergenic | 25.0% |
| !! | AAAGTTTTTCTGTTGCTAAT+GGG | + | chr4.3:15052513-15052532 | MS.gene08551:intron | 25.0% |
| !! | AAATAAATTGGTTGTTTCAG+TGG | + | chr4.3:15050785-15050804 | MS.gene08551:intron | 25.0% |
| !! | AAATACAAGGAGAACATTTT+GGG | - | chr4.3:15053025-15053044 | None:intergenic | 25.0% |
| !! | ATATTTGTGTGTTTTTCTCT+TGG | + | chr4.3:15053220-15053239 | MS.gene08551:intron | 25.0% |
| !! | ATTAATAAGCCGTTTAGTTT+GGG | - | chr4.3:15053716-15053735 | None:intergenic | 25.0% |
| !! | GGTATTTTATGAGTAAGAAT+AGG | + | chr4.3:15052841-15052860 | MS.gene08551:intron | 25.0% |
| !! | TAATGTTTTCAGCAAATACA+AGG | - | chr4.3:15053038-15053057 | None:intergenic | 25.0% |
| !! | TTTGAGATGAGAGATTATAA+AGG | - | chr4.3:15053692-15053711 | None:intergenic | 25.0% |
| !! | TTTTGTGAATCTTAACTTAC+TGG | - | chr4.3:15054405-15054424 | None:intergenic | 25.0% |
| !!! | AACAAGGACAAAATTTTAGT+TGG | + | chr4.3:15051127-15051146 | MS.gene08551:CDS | 25.0% |
| !!! | AATGTGTTATGTTTTTGTAC+GGG | + | chr4.3:15050995-15051014 | MS.gene08551:intron | 25.0% |
| !!! | AGAAAGTGCTTTTTATTACA+AGG | - | chr4.3:15051381-15051400 | None:intergenic | 25.0% |
| !!! | AGAAGTTATCTTTGTTTTGT+AGG | + | chr4.3:15051463-15051482 | MS.gene08551:intron | 25.0% |
| !!! | CATTATTTAGTTTTTGACTG+GGG | + | chr4.3:15052003-15052022 | MS.gene08551:intron | 25.0% |
| !!! | GAACTTTCTCTGAAATAAAT+TGG | + | chr4.3:15050773-15050792 | MS.gene08551:intron | 25.0% |
| !!! | GCATTATTTAGTTTTTGACT+GGG | + | chr4.3:15052002-15052021 | MS.gene08551:intron | 25.0% |
| !!! | GTTTCCATGCAATTATTTTT+CGG | + | chr4.3:15053816-15053835 | MS.gene08551:intron | 25.0% |
| !!! | TGCATTATTTAGTTTTTGAC+TGG | + | chr4.3:15052001-15052020 | MS.gene08551:intron | 25.0% |
| AAAAAGAAACAAACAGGAGT+TGG | + | chr4.3:15053992-15054011 | MS.gene08551:CDS | 30.0% | |
| AAAGAGAGAACAAAATCATC+AGG | + | chr4.3:15051540-15051559 | MS.gene08551:CDS | 30.0% | |
| AAATCAACTTCTTCATCTTC+TGG | - | chr4.3:15051163-15051182 | None:intergenic | 30.0% | |
| AACACTTAAGTATCACAAAG+TGG | - | chr4.3:15053739-15053758 | None:intergenic | 30.0% | |
| AACTTCTAATACTGTGTCTA+TGG | - | chr4.3:15052642-15052661 | None:intergenic | 30.0% | |
| AATGGAAGATGTTAATTAGG+GGG | + | chr4.3:15054198-15054217 | MS.gene08551:intron | 30.0% | |
| AATTACTGTATGTATATGCG+TGG | - | chr4.3:15051758-15051777 | None:intergenic | 30.0% | |
| ACCAAAATAAGTAACAGATG+TGG | - | chr4.3:15053798-15053817 | None:intergenic | 30.0% | |
| AGAGTTTATATCTACTTACG+AGG | + | chr4.3:15052103-15052122 | MS.gene08551:CDS | 30.0% | |
| AGTTAGTAAGTCTGTTAGTT+TGG | - | chr4.3:15053579-15053598 | None:intergenic | 30.0% | |
| ATCAATTACTCTCTTTCTTG+AGG | - | chr4.3:15052813-15052832 | None:intergenic | 30.0% | |
| ATCTACTTACGAGGAAAAAT+TGG | + | chr4.3:15052112-15052131 | MS.gene08551:CDS | 30.0% | |
| ATGATCGTTATCTTGTTGAT+TGG | + | chr4.3:15054461-15054480 | MS.gene08551:intron | 30.0% | |
| CATGTCAAGATGAACAATAA+TGG | + | chr4.3:15050709-15050728 | MS.gene08551:CDS | 30.0% | |
| CCAAAATAAGTAACAGATGT+GGG | - | chr4.3:15053797-15053816 | None:intergenic | 30.0% | |
| CCTGAAATGGAGATTATAAA+GGG | + | chr4.3:15051067-15051086 | MS.gene08551:CDS | 30.0% | |
| CTATGAGGAAAATGAATGTA+TGG | - | chr4.3:15051445-15051464 | None:intergenic | 30.0% | |
| GAAAATGAATGTATGGCTTT+AGG | - | chr4.3:15051438-15051457 | None:intergenic | 30.0% | |
| GACATTCATATTATTTCCTC+TGG | + | chr4.3:15051565-15051584 | MS.gene08551:CDS | 30.0% | |
| GATTAATAAGCCGTTTAGTT+TGG | - | chr4.3:15053717-15053736 | None:intergenic | 30.0% | |
| GCATAAAAAGTGACTTTATC+TGG | + | chr4.3:15052752-15052771 | MS.gene08551:intron | 30.0% | |
| GGAGATTATAAAGGGAAAAA+AGG | + | chr4.3:15051075-15051094 | MS.gene08551:CDS | 30.0% | |
| TAATCGAAAAAGGAAGAACA+AGG | + | chr4.3:15051111-15051130 | MS.gene08551:CDS | 30.0% | |
| TAGAGATTCTGATATTGAAG+CGG | + | chr4.3:15051347-15051366 | MS.gene08551:CDS | 30.0% | |
| TATAAGGTTTAACGATGCTT+TGG | + | chr4.3:15052452-15052471 | MS.gene08551:intron | 30.0% | |
| TATTCAAATTATACGCATGC+AGG | - | chr4.3:15052683-15052702 | None:intergenic | 30.0% | |
| TCAGGATTTCTGAATTAGTT+AGG | - | chr4.3:15052969-15052988 | None:intergenic | 30.0% | |
| TCCTGAAATGGAGATTATAA+AGG | + | chr4.3:15051066-15051085 | MS.gene08551:CDS | 30.0% | |
| TCTGATATATGGAGGAAAAA+AGG | - | chr4.3:15051270-15051289 | None:intergenic | 30.0% | |
| TCTTCCTTAAAGCAAAATAG+AGG | + | chr4.3:15052157-15052176 | MS.gene08551:intron | 30.0% | |
| TTGACCGAAAAATAATTGCA+TGG | - | chr4.3:15053823-15053842 | None:intergenic | 30.0% | |
| ! | AAGTTTTTCTGTTGCTAATG+GGG | + | chr4.3:15052514-15052533 | MS.gene08551:intron | 30.0% |
| ! | AATACAAGGAGAACATTTTG+GGG | - | chr4.3:15053024-15053043 | None:intergenic | 30.0% |
| ! | AATCTTTTTCTTCTTTTCCC+CGG | - | chr4.3:15050656-15050675 | None:intergenic | 30.0% |
| ! | CAAAGTTTTTCTGTTGCTAA+TGG | + | chr4.3:15052512-15052531 | MS.gene08551:intron | 30.0% |
| ! | CAAATACAAGGAGAACATTT+TGG | - | chr4.3:15053026-15053045 | None:intergenic | 30.0% |
| ! | CATAGAATGCAGCTTTTAAA+GGG | + | chr4.3:15050810-15050829 | MS.gene08551:CDS | 30.0% |
| ! | CATGCTAATGCAAATTTTGA+TGG | - | chr4.3:15054234-15054253 | None:intergenic | 30.0% |
| ! | GTTGATTTAGAAGAGCAAAA+TGG | + | chr4.3:15051175-15051194 | MS.gene08551:CDS | 30.0% |
| ! | GTTGATTTAGAAGTGCAAAA+CGG | + | chr4.3:15050906-15050925 | MS.gene08551:CDS | 30.0% |
| ! | TCATAGAATGCAGCTTTTAA+AGG | + | chr4.3:15050809-15050828 | MS.gene08551:CDS | 30.0% |
| ! | TCTCTCTTTTCTGATGATTT+TGG | - | chr4.3:15051529-15051548 | None:intergenic | 30.0% |
| ! | TGTCCTTGTTCTTTCTTTTT+CGG | - | chr4.3:15050860-15050879 | None:intergenic | 30.0% |
| ! | TTATTTTCCTTCATAAGGGA+GGG | + | chr4.3:15052390-15052409 | MS.gene08551:intron | 30.0% |
| ! | TTGTGATTCTAAAGAAGAGA+AGG | + | chr4.3:15051305-15051324 | MS.gene08551:CDS | 30.0% |
| ! | TTTTTCCTCCATATATCAGA+TGG | + | chr4.3:15051270-15051289 | MS.gene08551:intron | 30.0% |
| !! | AAATGGTAAGTTGATGGTTA+CGG | + | chr4.3:15051192-15051211 | MS.gene08551:intron | 30.0% |
| !! | AACTCCTGTTTGTTTCTTTT+TGG | - | chr4.3:15053993-15054012 | None:intergenic | 30.0% |
| !! | AATTATTTTTCGGTCAATGC+AGG | + | chr4.3:15053826-15053845 | MS.gene08551:intron | 30.0% |
| !! | AGAAAGGTGTTAGAACTTTA+GGG | - | chr4.3:15053451-15053470 | None:intergenic | 30.0% |
| !! | ATTATAAAGGGCATTGTTGT+GGG | - | chr4.3:15053679-15053698 | None:intergenic | 30.0% |
| !! | TTAATAAGCCGTTTAGTTTG+GGG | - | chr4.3:15053715-15053734 | None:intergenic | 30.0% |
| !!! | AGCTAGCTAAATAGTTTTAG+AGG | + | chr4.3:15053157-15053176 | MS.gene08551:intron | 30.0% |
| !!! | ATGTTGATGTTTTTTGGCTT+AGG | + | chr4.3:15052727-15052746 | MS.gene08551:intron | 30.0% |
| !!! | TAGCTAAATAGTTTTAGAGG+TGG | + | chr4.3:15053160-15053179 | MS.gene08551:intron | 30.0% |
| !!! | TTCTTTCTTTTTCGGCTAAT+AGG | - | chr4.3:15050852-15050871 | None:intergenic | 30.0% |
| AAAAGAGAAGCTCAGAGAAA+TGG | + | chr4.3:15054037-15054056 | MS.gene08551:CDS | 35.0% | |
| AATACCATCAAAGTAGACCA+GGG | + | chr4.3:15052054-15052073 | MS.gene08551:CDS | 35.0% | |
| AATCTTAACTTACTGGCAGA+AGG | - | chr4.3:15054398-15054417 | None:intergenic | 35.0% | |
| ACCTTTCTCTTCCTTAAGTT+GGG | + | chr4.3:15053463-15053482 | MS.gene08551:intron | 35.0% | |
| ACTATTGTTAGATGTCCATC+AGG | - | chr4.3:15053000-15053019 | None:intergenic | 35.0% | |
| AGCCATGGAACAAACAAAAA+GGG | + | chr4.3:15053369-15053388 | MS.gene08551:intron | 35.0% | |
| AGCTGCTGCAGAAAATAAAT+TGG | + | chr4.3:15053967-15053986 | MS.gene08551:CDS | 35.0% | |
| AGGGTTATCTGACTATAATC+AGG | - | chr4.3:15052238-15052257 | None:intergenic | 35.0% | |
| ATACAGATGAGAGCCAATAA+TGG | + | chr4.3:15053097-15053116 | MS.gene08551:intron | 35.0% | |
| ATCTCAAACCCCAAACTAAA+CGG | + | chr4.3:15053704-15053723 | MS.gene08551:intron | 35.0% | |
| ATCTTAACTTACTGGCAGAA+GGG | - | chr4.3:15054397-15054416 | None:intergenic | 35.0% | |
| ATGGAAGATGTTAATTAGGG+GGG | + | chr4.3:15054199-15054218 | MS.gene08551:intron | 35.0% | |
| CATTATCCCCACTGATAAAA+GGG | - | chr4.3:15052257-15052276 | None:intergenic | 35.0% | |
| CATTATTCTTCTGCAATCAG+GGG | - | chr4.3:15052875-15052894 | None:intergenic | 35.0% | |
| CCCTTTATAATCTCCATTTC+AGG | - | chr4.3:15051070-15051089 | None:intergenic | 35.0% | |
| CCTTAAAGCAAAATAGAGGT+TGG | + | chr4.3:15052161-15052180 | MS.gene08551:intron | 35.0% | |
| CTAAATATGCTGTTAGGATG+TGG | + | chr4.3:15052551-15052570 | MS.gene08551:intron | 35.0% | |
| GAGAAACATCACAGAAGATA+AGG | - | chr4.3:15054340-15054359 | None:intergenic | 35.0% | |
| GAGTGAACTCATAGATAACT+TGG | + | chr4.3:15053281-15053300 | MS.gene08551:intron | 35.0% | |
| GCATTATTCTTCTGCAATCA+GGG | - | chr4.3:15052876-15052895 | None:intergenic | 35.0% | |
| GGTAATCATGTATCACAGAT+TGG | - | chr4.3:15053074-15053093 | None:intergenic | 35.0% | |
| GTATGCAAAATGAAGCTTGA+AGG | - | chr4.3:15053421-15053440 | None:intergenic | 35.0% | |
| GTGAGATGAGAGATTATGAA+GGG | - | chr4.3:15053553-15053572 | None:intergenic | 35.0% | |
| TAGCCGAAAAAGAAAGAACA+AGG | + | chr4.3:15050854-15050873 | MS.gene08551:CDS | 35.0% | |
| TAGGGTTATTGCATATAAGC+AGG | + | chr4.3:15054306-15054325 | MS.gene08551:intron | 35.0% | |
| TCAATATTCAGTATCCAAGC+AGG | + | chr4.3:15053634-15053653 | MS.gene08551:intron | 35.0% | |
| TCATTATCCCCACTGATAAA+AGG | - | chr4.3:15052258-15052277 | None:intergenic | 35.0% | |
| TCTAAAGAAGAGAAGGTCAA+AGG | + | chr4.3:15051312-15051331 | MS.gene08551:CDS | 35.0% | |
| TGAGATAGTTGGAAGAAACA+TGG | - | chr4.3:15052936-15052955 | None:intergenic | 35.0% | |
| TGCATTATTCTTCTGCAATC+AGG | - | chr4.3:15052877-15052896 | None:intergenic | 35.0% | |
| TGTGAGATGAGAGATTATGA+AGG | - | chr4.3:15053554-15053573 | None:intergenic | 35.0% | |
| TTACGAGGAAAAATTGGAAG+AGG | + | chr4.3:15052118-15052137 | MS.gene08551:CDS | 35.0% | |
| TTCTCACTTCCCTAATATCT+TGG | + | chr4.3:15054355-15054374 | MS.gene08551:intron | 35.0% | |
| TTGGCCAAAAAGAAACAAAC+AGG | + | chr4.3:15053986-15054005 | MS.gene08551:CDS | 35.0% | |
| ! | AGAGCAAAATGGTAAGTTGA+TGG | + | chr4.3:15051186-15051205 | MS.gene08551:intron | 35.0% |
| ! | AGATAACCCTTTTATCAGTG+GGG | + | chr4.3:15052248-15052267 | MS.gene08551:intron | 35.0% |
| ! | ATACAAGGAGAACATTTTGG+GGG | - | chr4.3:15053023-15053042 | None:intergenic | 35.0% |
| ! | ATTTCTTTAGAGACATCCAC+GGG | - | chr4.3:15053196-15053215 | None:intergenic | 35.0% |
| ! | CAGATAACCCTTTTATCAGT+GGG | + | chr4.3:15052247-15052266 | MS.gene08551:intron | 35.0% |
| ! | CCAACCTCTATTTTGCTTTA+AGG | - | chr4.3:15052164-15052183 | None:intergenic | 35.0% |
| ! | GATTTCTTTAGAGACATCCA+CGG | - | chr4.3:15053197-15053216 | None:intergenic | 35.0% |
| ! | GCTCATTAAAGTACCCATTT+CGG | - | chr4.3:15053352-15053371 | None:intergenic | 35.0% |
| ! | GTAAAGGAGAAAAAGGCATA+CGG | + | chr4.3:15050629-15050648 | MS.gene08551:CDS | 35.0% |
| ! | TCAACATCAAAAAGCACGTA+AGG | - | chr4.3:15052714-15052733 | None:intergenic | 35.0% |
| ! | TCAGATAACCCTTTTATCAG+TGG | + | chr4.3:15052246-15052265 | MS.gene08551:intron | 35.0% |
| !! | CCCACATCTGTTACTTATTT+TGG | + | chr4.3:15053794-15053813 | MS.gene08551:intron | 35.0% |
| !! | GAGAAAGGTGTTAGAACTTT+AGG | - | chr4.3:15053452-15053471 | None:intergenic | 35.0% |
| !! | GATTATAAAGGGCATTGTTG+TGG | - | chr4.3:15053680-15053699 | None:intergenic | 35.0% |
| !! | GTTATTTTCCTTCATAAGGG+AGG | + | chr4.3:15052389-15052408 | MS.gene08551:intron | 35.0% |
| !! | TTCCCTTTTTGTTTGTTCCA+TGG | - | chr4.3:15053374-15053393 | None:intergenic | 35.0% |
| !! | TTGGTGCTAAATATGCTGTT+AGG | + | chr4.3:15052545-15052564 | MS.gene08551:intron | 35.0% |
| !!! | GAGCTTCTCTTTTTTGAAAG+CGG | - | chr4.3:15054030-15054049 | None:intergenic | 35.0% |
| !!! | GTTCTTCCTTTTTCGATTAG+TGG | - | chr4.3:15051110-15051129 | None:intergenic | 35.0% |
| AAAACTACTGACGCTGAAAG+TGG | + | chr4.3:15053920-15053939 | MS.gene08551:CDS | 40.0% | |
| AAACTACTGACGCTGAAAGT+GGG | + | chr4.3:15053921-15053940 | MS.gene08551:CDS | 40.0% | |
| AAGATGTTAATTAGGGGGGT+TGG | + | chr4.3:15054203-15054222 | MS.gene08551:intron | 40.0% | |
| AAGCCACCACTAATCGAAAA+AGG | + | chr4.3:15051101-15051120 | MS.gene08551:CDS | 40.0% | |
| AAGGAGGAATAGGTCTGTAT+TGG | - | chr4.3:15053402-15053421 | None:intergenic | 40.0% | |
| AATATGCTGTTAGGATGTGG+AGG | + | chr4.3:15052554-15052573 | MS.gene08551:intron | 40.0% | |
| AGAAAGTTCAACAATGTGCG+AGG | - | chr4.3:15050762-15050781 | None:intergenic | 40.0% | |
| AGATGTTAATTAGGGGGGTT+GGG | + | chr4.3:15054204-15054223 | MS.gene08551:intron | 40.0% | |
| AGGAGGAATAGGTCTGTATT+GGG | - | chr4.3:15053401-15053420 | None:intergenic | 40.0% | |
| ATCAGAATCTCTACGCTTCT+TGG | - | chr4.3:15051340-15051359 | None:intergenic | 40.0% | |
| ATGAAGCTTGAAGGAGGAAT+AGG | - | chr4.3:15053412-15053431 | None:intergenic | 40.0% | |
| ATGGGTACTTTAATGAGCCA+TGG | + | chr4.3:15053354-15053373 | MS.gene08551:intron | 40.0% | |
| ATGTCTACATGCTCACTGAT+AGG | - | chr4.3:15051858-15051877 | None:intergenic | 40.0% | |
| ATTTCCTTTAGCAGGACGAA+TGG | + | chr4.3:15053504-15053523 | MS.gene08551:intron | 40.0% | |
| CACCTTTCTCTTCCTTAAGT+TGG | + | chr4.3:15053462-15053481 | MS.gene08551:intron | 40.0% | |
| CCACTACTCCATCTGATATA+TGG | - | chr4.3:15051281-15051300 | None:intergenic | 40.0% | |
| CCATATATCAGATGGAGTAG+TGG | + | chr4.3:15051278-15051297 | MS.gene08551:intron | 40.0% | |
| CTACTCCATCTGATATATGG+AGG | - | chr4.3:15051278-15051297 | None:intergenic | 40.0% | |
| CTGAAAACATTATTCCGCCA+AGG | + | chr4.3:15053046-15053065 | MS.gene08551:intron | 40.0% | |
| GAATACCATCAAAGTAGACC+AGG | + | chr4.3:15052053-15052072 | MS.gene08551:CDS | 40.0% | |
| GAGCCATGGAACAAACAAAA+AGG | + | chr4.3:15053368-15053387 | MS.gene08551:intron | 40.0% | |
| GCGTGGCAACTATTGTAAAT+TGG | - | chr4.3:15051741-15051760 | None:intergenic | 40.0% | |
| GTTAGTTGAGCTGAGATAGT+TGG | - | chr4.3:15052947-15052966 | None:intergenic | 40.0% | |
| TGCAAAATGAAGCTTGAAGG+AGG | - | chr4.3:15053418-15053437 | None:intergenic | 40.0% | |
| TGCTAATGGGGTATGTTAGT+TGG | + | chr4.3:15052526-15052545 | MS.gene08551:intron | 40.0% | |
| TGGAAGAAACATGGCATGTT+GGG | - | chr4.3:15052927-15052946 | None:intergenic | 40.0% | |
| TGTATCACAGATTGGAACCT+TGG | - | chr4.3:15053066-15053085 | None:intergenic | 40.0% | |
| TGTTTCAGTGGATCCTGAAA+TGG | + | chr4.3:15051054-15051073 | MS.gene08551:intron | 40.0% | |
| TTGACCATGACATCCGAAAT+GGG | + | chr4.3:15053336-15053355 | MS.gene08551:intron | 40.0% | |
| TTGGAAGAAACATGGCATGT+TGG | - | chr4.3:15052928-15052947 | None:intergenic | 40.0% | |
| TTGTACACAGTATATACGGC+AGG | - | chr4.3:15050949-15050968 | None:intergenic | 40.0% | |
| ! | ATTGGCTCTCATCTGTATCT+TGG | - | chr4.3:15053095-15053114 | None:intergenic | 40.0% |
| ! | CTGATTTAAGACAGCGTCTA+GGG | - | chr4.3:15054559-15054578 | None:intergenic | 40.0% |
| ! | TAGTTTTCTTCCTACCCTTG+TGG | - | chr4.3:15053907-15053926 | None:intergenic | 40.0% |
| ! | TCTTTCAACCTGTTGACTAC+TGG | + | chr4.3:15051893-15051912 | MS.gene08551:intron | 40.0% |
| ! | TGATTTAAGACAGCGTCTAG+GGG | - | chr4.3:15054558-15054577 | None:intergenic | 40.0% |
| ! | TGTTTTGCTTGCAGAGCTAA+TGG | + | chr4.3:15054632-15054651 | MS.gene08551:intron | 40.0% |
| !! | ATTATGAAGGGCATTGTCGT+GGG | - | chr4.3:15053541-15053560 | None:intergenic | 40.0% |
| !!! | CTTCCTTTTTCGATTAGTGG+TGG | - | chr4.3:15051107-15051126 | None:intergenic | 40.0% |
| ACCACATTCCAGTAGTCAAC+AGG | - | chr4.3:15051904-15051923 | None:intergenic | 45.0% | |
| ACTGCAGAGCAAATTTGAGG+AGG | + | chr4.3:15054656-15054675 | MS.gene08551:CDS | 45.0% | |
| AGCATCAAGTGCTAAGCACA+TGG | - | chr4.3:15052480-15052499 | None:intergenic | 45.0% | |
| AGTACCCATTTCGGATGTCA+TGG | - | chr4.3:15053343-15053362 | None:intergenic | 45.0% | |
| ATCACAGATTGGAACCTTGG+CGG | - | chr4.3:15053063-15053082 | None:intergenic | 45.0% | |
| ATGCTCACTGATAGGCAGTA+GGG | - | chr4.3:15051850-15051869 | None:intergenic | 45.0% | |
| ATGTTAATTAGGGGGGTTGG+GGG | + | chr4.3:15054206-15054225 | MS.gene08551:intron | 45.0% | |
| CATTTCGGATGTCATGGTCA+AGG | - | chr4.3:15053337-15053356 | None:intergenic | 45.0% | |
| CGAGGCTCATTCATGCTTTA+CGG | + | chr4.3:15054512-15054531 | MS.gene08551:intron | 45.0% | |
| CTTGACCATGACATCCGAAA+TGG | + | chr4.3:15053335-15053354 | MS.gene08551:intron | 45.0% | |
| GAAACATGGCATGTTGGGTA+AGG | - | chr4.3:15052922-15052941 | None:intergenic | 45.0% | |
| GAAAGGTGAAGCCCAACTTA+AGG | - | chr4.3:15053477-15053496 | None:intergenic | 45.0% | |
| GATGTTAATTAGGGGGGTTG+GGG | + | chr4.3:15054205-15054224 | MS.gene08551:intron | 45.0% | |
| GCCCAACTTAAGGAAGAGAA+AGG | - | chr4.3:15053467-15053486 | None:intergenic | 45.0% | |
| GCTATCGTTGTGAGCAATGA+AGG | - | chr4.3:15053140-15053159 | None:intergenic | 45.0% | |
| GGAACTGCAGAGCAAATTTG+AGG | + | chr4.3:15054653-15054672 | MS.gene08551:CDS | 45.0% | |
| GGAATACTCAAACCACAGAG+TGG | + | chr4.3:15052024-15052043 | MS.gene08551:intron | 45.0% | |
| GGAGATGATGACTGCTCAAA+TGG | + | chr4.3:15051586-15051605 | MS.gene08551:CDS | 45.0% | |
| GTATTCCATGATCCACTCTG+TGG | - | chr4.3:15052039-15052058 | None:intergenic | 45.0% | |
| TAGATGTCCATCAGGACTGT+TGG | - | chr4.3:15052992-15053011 | None:intergenic | 45.0% | |
| TCAAACCACAGAGTGGATCA+TGG | + | chr4.3:15052031-15052050 | MS.gene08551:intron | 45.0% | |
| TTGTGAGCAATGAAGGTCTG+TGG | - | chr4.3:15053133-15053152 | None:intergenic | 45.0% | |
| ! | ACCTGTTGACTACTGGAATG+TGG | + | chr4.3:15051900-15051919 | MS.gene08551:intron | 45.0% |
| ! | GCTGATTTAAGACAGCGTCT+AGG | - | chr4.3:15054560-15054579 | None:intergenic | 45.0% |
| !! | CATTGTTGTGGGAGAGTACT+AGG | - | chr4.3:15053668-15053687 | None:intergenic | 45.0% |
| !! | GATTATGAAGGGCATTGTCG+TGG | - | chr4.3:15053542-15053561 | None:intergenic | 45.0% |
| !! | GTAAGTTGATGGTTACGGTG+TGG | + | chr4.3:15051197-15051216 | MS.gene08551:intron | 45.0% |
| !!! | ATAAAATCATATAATTTTTA+AGG | - | chr4.3:15054491-15054510 | None:intergenic | 5.0% |
| AAAGAAGCCCTTGCTGCAGA+AGG | + | chr4.3:15053860-15053879 | MS.gene08551:CDS | 50.0% | |
| ACATGGCATGTTGGGTAAGG+AGG | - | chr4.3:15052919-15052938 | None:intergenic | 50.0% | |
| ACTAGGTCTTTCGTCCTGCT+TGG | - | chr4.3:15053651-15053670 | None:intergenic | 50.0% | |
| AGAGCCAATAATGGCCTCTG+GGG | + | chr4.3:15053106-15053125 | MS.gene08551:intron | 50.0% | |
| AGTAGGGTGGATGTTGGCAA+AGG | - | chr4.3:15051834-15051853 | None:intergenic | 50.0% | |
| ATAGGCAGTAGGGTGGATGT+TGG | - | chr4.3:15051840-15051859 | None:intergenic | 50.0% | |
| ATCCTGACCAACAGTCCTGA+TGG | + | chr4.3:15052982-15053001 | MS.gene08551:intron | 50.0% | |
| CATGCTCACTGATAGGCAGT+AGG | - | chr4.3:15051851-15051870 | None:intergenic | 50.0% | |
| CCAACCCTGGTCTACTTTGA+TGG | - | chr4.3:15052061-15052080 | None:intergenic | 50.0% | |
| CCATCAAAGTAGACCAGGGT+TGG | + | chr4.3:15052058-15052077 | MS.gene08551:CDS | 50.0% | |
| CCTTCATAAGGGAGGGCTAA+GGG | + | chr4.3:15052397-15052416 | MS.gene08551:intron | 50.0% | |
| GAGAGCCAATAATGGCCTCT+GGG | + | chr4.3:15053105-15053124 | MS.gene08551:intron | 50.0% | |
| GCTGAAAGTGGGATTGCTGT+GGG | + | chr4.3:15053932-15053951 | MS.gene08551:CDS | 50.0% | |
| GTCTAGGGGTGAGGGAAAAT+GGG | - | chr4.3:15054544-15054563 | None:intergenic | 50.0% | |
| GTGGCACATGTTTCAGCAAG+AGG | + | chr4.3:15053256-15053275 | MS.gene08551:intron | 50.0% | |
| TAGGCCATTCGTCCTGCTAA+AGG | - | chr4.3:15053511-15053530 | None:intergenic | 50.0% | |
| TCAAAGTAGACCAGGGTTGG+AGG | + | chr4.3:15052061-15052080 | MS.gene08551:CDS | 50.0% | |
| TCCTTCATAAGGGAGGGCTA+AGG | + | chr4.3:15052396-15052415 | MS.gene08551:intron | 50.0% | |
| TCTAGGGGTGAGGGAAAATG+GGG | - | chr4.3:15054543-15054562 | None:intergenic | 50.0% | |
| TGAGAGCCAATAATGGCCTC+TGG | + | chr4.3:15053104-15053123 | MS.gene08551:intron | 50.0% | |
| TGAGCAGTCATCATCTCCAG+AGG | - | chr4.3:15051584-15051603 | None:intergenic | 50.0% | |
| TGCAACAGTTGAGAGCTGCT+AGG | + | chr4.3:15054691-15054710 | MS.gene08551:CDS | 50.0% | |
| TGTTGCAAAACCTCCAACCC+TGG | - | chr4.3:15052074-15052093 | None:intergenic | 50.0% | |
| ! | AGAAAAAGGCATACGGACCG+GGG | + | chr4.3:15050636-15050655 | MS.gene08551:CDS | 50.0% |
| ! | AGGTGGCTTCTATTTTCCCG+TGG | + | chr4.3:15053177-15053196 | MS.gene08551:intron | 50.0% |
| ! | GAGAAAAAGGCATACGGACC+GGG | + | chr4.3:15050635-15050654 | MS.gene08551:CDS | 50.0% |
| ! | GGAGAAAAAGGCATACGGAC+CGG | + | chr4.3:15050634-15050653 | MS.gene08551:CDS | 50.0% |
| !! | CATTGTCGTGGGAGAGTACT+AGG | - | chr4.3:15053530-15053549 | None:intergenic | 50.0% |
| AAGACAGCGTCTAGGGGTGA+GGG | - | chr4.3:15054552-15054571 | None:intergenic | 55.0% | |
| AAGTGGGATTGCTGTGGGCT+CGG | + | chr4.3:15053937-15053956 | MS.gene08551:CDS | 55.0% | |
| ACGGTGGTTCAGCACCACAA+GGG | + | chr4.3:15053890-15053909 | MS.gene08551:CDS | 55.0% | |
| CCATCCTCCTTCTGCAGCAA+GGG | - | chr4.3:15053870-15053889 | None:intergenic | 55.0% | |
| CCCTTAGCCCTCCCTTATGA+AGG | - | chr4.3:15052400-15052419 | None:intergenic | 55.0% | |
| CGCTGAAAGTGGGATTGCTG+TGG | + | chr4.3:15053931-15053950 | MS.gene08551:CDS | 55.0% | |
| CGTCTAGGGGTGAGGGAAAA+TGG | - | chr4.3:15054545-15054564 | None:intergenic | 55.0% | |
| CTCACTGATAGGCAGTAGGG+TGG | - | chr4.3:15051847-15051866 | None:intergenic | 55.0% | |
| GTCCATCAGGACTGTTGGTC+AGG | - | chr4.3:15052987-15053006 | None:intergenic | 55.0% | |
| TAAGACAGCGTCTAGGGGTG+AGG | - | chr4.3:15054553-15054572 | None:intergenic | 55.0% | |
| TCCATCCTCCTTCTGCAGCA+AGG | - | chr4.3:15053871-15053890 | None:intergenic | 55.0% | |
| TCTTGGTCATTGCTGCAGCG+TGG | + | chr4.3:15053237-15053256 | MS.gene08551:intron | 55.0% | |
| TGCTGCAGAAGGAGGATGGA+CGG | + | chr4.3:15053871-15053890 | MS.gene08551:CDS | 55.0% | |
| TGGACCCCAGAGGCCATTAT+TGG | - | chr4.3:15053113-15053132 | None:intergenic | 55.0% | |
| TGGTTCAGCACCACAAGGGT+AGG | + | chr4.3:15053894-15053913 | MS.gene08551:CDS | 55.0% | |
| CCCTTGCTGCAGAAGGAGGA+TGG | + | chr4.3:15053867-15053886 | MS.gene08551:CDS | 60.0% | |
| GAAGCCCTTGCTGCAGAAGG+AGG | + | chr4.3:15053863-15053882 | MS.gene08551:CDS | 60.0% | |
| GACGGTGGTTCAGCACCACA+AGG | + | chr4.3:15053889-15053908 | MS.gene08551:CDS | 60.0% | |
| TGAAGGTCTGTGGACCCCAG+AGG | - | chr4.3:15053123-15053142 | None:intergenic | 60.0% | |
| TGCAGAAGGAGGATGGACGG+TGG | + | chr4.3:15053874-15053893 | MS.gene08551:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 15050616 | 15054731 | 15050616 | ID=MS.gene08551 |
| chr4.3 | mRNA | 15050616 | 15054731 | 15050616 | ID=MS.gene08551.t1;Parent=MS.gene08551 |
| chr4.3 | exon | 15050616 | 15050730 | 15050616 | ID=MS.gene08551.t1.exon1;Parent=MS.gene08551.t1 |
| chr4.3 | CDS | 15050616 | 15050730 | 15050616 | ID=cds.MS.gene08551.t1;Parent=MS.gene08551.t1 |
| chr4.3 | exon | 15050805 | 15050927 | 15050805 | ID=MS.gene08551.t1.exon2;Parent=MS.gene08551.t1 |
| chr4.3 | CDS | 15050805 | 15050927 | 15050805 | ID=cds.MS.gene08551.t1;Parent=MS.gene08551.t1 |
| chr4.3 | exon | 15051062 | 15051196 | 15051062 | ID=MS.gene08551.t1.exon3;Parent=MS.gene08551.t1 |
| chr4.3 | CDS | 15051062 | 15051196 | 15051062 | ID=cds.MS.gene08551.t1;Parent=MS.gene08551.t1 |
| chr4.3 | exon | 15051289 | 15051381 | 15051289 | ID=MS.gene08551.t1.exon4;Parent=MS.gene08551.t1 |
| chr4.3 | CDS | 15051289 | 15051381 | 15051289 | ID=cds.MS.gene08551.t1;Parent=MS.gene08551.t1 |
| chr4.3 | exon | 15051485 | 15051616 | 15051485 | ID=MS.gene08551.t1.exon5;Parent=MS.gene08551.t1 |
| chr4.3 | CDS | 15051485 | 15051616 | 15051485 | ID=cds.MS.gene08551.t1;Parent=MS.gene08551.t1 |
| chr4.3 | exon | 15052042 | 15052139 | 15052042 | ID=MS.gene08551.t1.exon6;Parent=MS.gene08551.t1 |
| chr4.3 | CDS | 15052042 | 15052139 | 15052042 | ID=cds.MS.gene08551.t1;Parent=MS.gene08551.t1 |
| chr4.3 | exon | 15053848 | 15054058 | 15053848 | ID=MS.gene08551.t1.exon7;Parent=MS.gene08551.t1 |
| chr4.3 | CDS | 15053848 | 15054058 | 15053848 | ID=cds.MS.gene08551.t1;Parent=MS.gene08551.t1 |
| chr4.3 | exon | 15054646 | 15054731 | 15054646 | ID=MS.gene08551.t1.exon8;Parent=MS.gene08551.t1 |
| chr4.3 | CDS | 15054646 | 15054731 | 15054646 | ID=cds.MS.gene08551.t1;Parent=MS.gene08551.t1 |
| Gene Sequence |
| Protein sequence |
