Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08552.t1 | XP_003629721.2 | 93.1 | 508 | 35 | 0 | 4 | 511 | 1 | 508 | 1.80E-291 | 1011.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08552.t1 | Q8W496 | 62.3 | 411 | 124 | 5 | 76 | 455 | 73 | 483 | 4.7e-168 | 592.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08552.t1 | A0A396GSW2 | 93.1 | 508 | 35 | 0 | 4 | 511 | 1 | 508 | 1.3e-291 | 1011.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049907 | MS.gene08552 | 0.809786 | 1.59E-50 | -1.69E-46 |
| MS.gene050581 | MS.gene08552 | 0.833572 | 4.94E-56 | -1.69E-46 |
| MS.gene054010 | MS.gene08552 | 0.837232 | 5.87E-57 | -1.69E-46 |
| MS.gene054011 | MS.gene08552 | 0.833918 | 4.05E-56 | -1.69E-46 |
| MS.gene054012 | MS.gene08552 | 0.844355 | 7.96E-59 | -1.69E-46 |
| MS.gene054013 | MS.gene08552 | 0.842826 | 2.04E-58 | -1.69E-46 |
| MS.gene054214 | MS.gene08552 | 0.837742 | 4.34E-57 | -1.69E-46 |
| MS.gene055604 | MS.gene08552 | 0.840268 | 9.63E-58 | -1.69E-46 |
| MS.gene056902 | MS.gene08552 | 0.814459 | 1.52E-51 | -1.69E-46 |
| MS.gene060005 | MS.gene08552 | 0.805307 | 1.42E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08552.t1 | MTR_8g085790 | 93.388 | 484 | 32 | 0 | 28 | 511 | 1 | 484 | 0.0 | 954 |
| MS.gene08552.t1 | MTR_8g085840 | 88.824 | 510 | 54 | 2 | 4 | 511 | 1 | 509 | 0.0 | 950 |
| MS.gene08552.t1 | MTR_8g085820 | 88.272 | 486 | 54 | 2 | 28 | 511 | 1 | 485 | 0.0 | 905 |
| MS.gene08552.t1 | MTR_8g085790 | 92.651 | 381 | 28 | 0 | 4 | 384 | 1 | 381 | 0.0 | 747 |
| MS.gene08552.t1 | MTR_4g057200 | 37.819 | 431 | 220 | 16 | 81 | 482 | 89 | 500 | 3.87e-84 | 270 |
| MS.gene08552.t1 | MTR_3g105820 | 27.426 | 474 | 267 | 13 | 44 | 467 | 46 | 492 | 3.97e-47 | 172 |
| MS.gene08552.t1 | MTR_8g085810 | 62.162 | 74 | 25 | 1 | 389 | 462 | 1 | 71 | 1.71e-24 | 97.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene08552.t1 | AT4G25650 | 58.476 | 525 | 195 | 9 | 1 | 511 | 1 | 516 | 0.0 | 628 |
| MS.gene08552.t1 | AT4G25650 | 56.307 | 547 | 195 | 10 | 1 | 511 | 1 | 539 | 0.0 | 620 |
| MS.gene08552.t1 | AT3G44880 | 35.583 | 489 | 255 | 18 | 46 | 494 | 39 | 507 | 4.91e-83 | 267 |
| MS.gene08552.t1 | AT2G24820 | 28.478 | 460 | 255 | 12 | 52 | 467 | 50 | 479 | 6.96e-50 | 179 |
| MS.gene08552.t1 | AT1G44446 | 22.276 | 413 | 227 | 20 | 58 | 433 | 79 | 434 | 1.05e-12 | 70.5 |
| MS.gene08552.t1 | AT1G44446 | 22.276 | 413 | 227 | 20 | 58 | 433 | 181 | 536 | 1.51e-12 | 70.5 |
| MS.gene08552.t1 | AT1G44446 | 25.225 | 222 | 113 | 9 | 58 | 256 | 181 | 372 | 6.59e-11 | 64.7 |
Find 125 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGAACCTGTTTCAACTTC+TGG | 0.199220 | 4.3:-15056236 | None:intergenic |
| TCCATCATTTGCTAGCTTAA+TGG | 0.218538 | 4.3:+15056992 | MS.gene08552:CDS |
| TTGAATCGAGGATCAGTATT+TGG | 0.226374 | 4.3:-15056921 | None:intergenic |
| TGGTGCTTTCCGAGAAATTT+TGG | 0.234178 | 4.3:+15057988 | MS.gene08552:CDS |
| CCATCATTTGCTAGCTTAAT+GGG | 0.262213 | 4.3:+15056993 | MS.gene08552:CDS |
| AGAATAATATCTTGTGGTTT+TGG | 0.262792 | 4.3:+15056898 | MS.gene08552:CDS |
| CACCACATTGAGGCTCTTAT+AGG | 0.282231 | 4.3:-15059035 | None:intergenic |
| ATCATATCAGTTGCTTCAAT+TGG | 0.287082 | 4.3:+15059073 | MS.gene08552:CDS |
| AATGATGGATCATCAATTTC+TGG | 0.296431 | 4.3:-15056978 | None:intergenic |
| TGGATGCTGGTCAAGAAAAT+TGG | 0.301039 | 4.3:+15058338 | MS.gene08552:CDS |
| CAATGGTTTCACTGCAAATC+AGG | 0.316257 | 4.3:+15057730 | MS.gene08552:CDS |
| GGAAACAGAGATATTCCTTA+TGG | 0.335690 | 4.3:+15057014 | MS.gene08552:CDS |
| CTAGTTACCGGAGGTCCTTC+AGG | 0.340658 | 4.3:-15056530 | None:intergenic |
| TGGGAATTGATGTTGTTATA+TGG | 0.344667 | 4.3:+15056342 | MS.gene08552:CDS |
| GAAGTGTTCCCACGGATTAA+TGG | 0.348211 | 4.3:-15056134 | None:intergenic |
| CTACTACTAGAATCTGTTAA+TGG | 0.354981 | 4.3:-15056191 | None:intergenic |
| ACAGAAGATGCAAGTTCATC+TGG | 0.362015 | 4.3:-15057806 | None:intergenic |
| ACCTCCTAGAGAACAGCTTA+TGG | 0.373079 | 4.3:+15058486 | MS.gene08552:CDS |
| TGCCTTTGTTGGCACAAAAC+AGG | 0.379469 | 4.3:-15058368 | None:intergenic |
| AAGGCAGATGCTCTTGTGAT+TGG | 0.399532 | 4.3:+15058385 | MS.gene08552:CDS |
| CTGGTTCATCATCCACTTCA+AGG | 0.399812 | 4.3:-15056217 | None:intergenic |
| TGCATCTTCTGTTGAAACTA+AGG | 0.404424 | 4.3:+15057817 | MS.gene08552:CDS |
| GTTAATCCATAGTGTGCATA+TGG | 0.414358 | 4.3:-15057543 | None:intergenic |
| CCCATTAAGCTAGCAAATGA+TGG | 0.416361 | 4.3:-15056993 | None:intergenic |
| ACAAGAGCATCTGCCTTTGT+TGG | 0.416937 | 4.3:-15058379 | None:intergenic |
| ATATTATTCTGCACAATGCT+TGG | 0.417838 | 4.3:-15056885 | None:intergenic |
| ATTGAAGAGTTAGATATCAA+TGG | 0.427054 | 4.3:+15057713 | MS.gene08552:CDS |
| CATCAATTTCTGGTATGAAT+GGG | 0.432152 | 4.3:-15056968 | None:intergenic |
| TCATCAATTTCTGGTATGAA+TGG | 0.435029 | 4.3:-15056969 | None:intergenic |
| CTGGTAATAGTAGACTGATT+TGG | 0.436210 | 4.3:+15057968 | MS.gene08552:CDS |
| TGAAGGAAGGATTGATCAAT+GGG | 0.437126 | 4.3:+15056433 | MS.gene08552:CDS |
| ACCCACAGTCCAAAATTTCT+CGG | 0.439221 | 4.3:-15057997 | None:intergenic |
| AAGAAATTCTATAGTTGTGC+TGG | 0.439574 | 4.3:+15059138 | MS.gene08552:CDS |
| CATGTTCCATATGCACACTA+TGG | 0.450961 | 4.3:+15057537 | MS.gene08552:CDS |
| GATTGGAGAGGAAAATATAG+TGG | 0.451279 | 4.3:+15058448 | MS.gene08552:CDS |
| ATTTGTATTCCTGTGAGTCC+TGG | 0.453411 | 4.3:+15057949 | MS.gene08552:CDS |
| CAATATGTGATCTTGACAAA+AGG | 0.457440 | 4.3:+15056297 | MS.gene08552:CDS |
| GATGAACCAGAAGTTGAAAC+AGG | 0.463226 | 4.3:+15056230 | MS.gene08552:CDS |
| TCATATCAGTTGCTTCAATT+GGG | 0.473164 | 4.3:+15059074 | MS.gene08552:CDS |
| TAATGCAGAAATCATCCGTT+CGG | 0.475564 | 4.3:+15057905 | MS.gene08552:intron |
| GAAACAGAGATATTCCTTAT+GGG | 0.476962 | 4.3:+15057015 | MS.gene08552:CDS |
| GATTGTTGCCGCAATAAAGC+AGG | 0.480412 | 4.3:+15059096 | MS.gene08552:CDS |
| CTGAAGGAAGGATTGATCAA+TGG | 0.483984 | 4.3:+15056432 | MS.gene08552:CDS |
| ATGCAGGTGATCAAGTTGAT+TGG | 0.490731 | 4.3:+15058431 | MS.gene08552:CDS |
| TGATTGCAAGTTCATTCCTC+AGG | 0.492594 | 4.3:+15056502 | MS.gene08552:CDS |
| AATAATGCTGATAGAGAAGG+AGG | 0.493895 | 4.3:+15057671 | MS.gene08552:CDS |
| ATTGGAGAGGAAAATATAGT+GGG | 0.516950 | 4.3:+15058449 | MS.gene08552:CDS |
| AAGGGCACCTCATGCTAAGA+AGG | 0.517511 | 4.3:+15056316 | MS.gene08552:CDS |
| AAATTAAAATCATACCCATA+AGG | 0.517619 | 4.3:-15057029 | None:intergenic |
| TATAAATAAAAGATGCTTGG+TGG | 0.517953 | 4.3:-15057776 | None:intergenic |
| CTATATAAATAAAAGATGCT+TGG | 0.518931 | 4.3:-15057779 | None:intergenic |
| GGCACCTCCTGAAGGACCTC+CGG | 0.521757 | 4.3:+15056523 | MS.gene08552:CDS |
| AACTCTTGCAATTCACCGTA+TGG | 0.523296 | 4.3:-15059003 | None:intergenic |
| AATATGTGATCTTGACAAAA+GGG | 0.523473 | 4.3:+15056298 | MS.gene08552:CDS |
| AAATGGTTAAAGAAGTATGC+AGG | 0.524010 | 4.3:+15058415 | MS.gene08552:CDS |
| CTAGAATCTGTTAATGGAGA+AGG | 0.526969 | 4.3:-15056185 | None:intergenic |
| AGATCACATATTGGCATCAA+AGG | 0.530584 | 4.3:-15056287 | None:intergenic |
| GTTTCACTGCAAATCAGGGT+TGG | 0.531039 | 4.3:+15057735 | MS.gene08552:CDS |
| TTTATATCTTCTCCATGTTG+AGG | 0.531042 | 4.3:+15058080 | MS.gene08552:CDS |
| AATGGTTTCACTGCAAATCA+GGG | 0.531344 | 4.3:+15057731 | MS.gene08552:CDS |
| ACCGCGATGGATTCTTCATG+TGG | 0.533829 | 4.3:+15058032 | MS.gene08552:CDS |
| CTGTCCATAAGCTGTTCTCT+AGG | 0.535255 | 4.3:-15058490 | None:intergenic |
| TGGTCAAGAAAATTGGCATA+AGG | 0.536911 | 4.3:+15058345 | MS.gene08552:CDS |
| TATATGGTGGGATAGGAATG+AGG | 0.538426 | 4.3:+15056358 | MS.gene08552:CDS |
| TGCCGCAATAAAGCAGGGAA+TGG | 0.543982 | 4.3:+15059102 | MS.gene08552:CDS |
| AGATTAGCACCTTTGTCTGA+AGG | 0.545291 | 4.3:+15056416 | MS.gene08552:CDS |
| CAAATCAGTCTACTATTACC+AGG | 0.545513 | 4.3:-15057967 | None:intergenic |
| GACAAAGGTGCTAATCTATG+AGG | 0.545842 | 4.3:-15056410 | None:intergenic |
| TAGCACCTTTGTCTGAAGGA+AGG | 0.548699 | 4.3:+15056420 | MS.gene08552:CDS |
| ATTCCTCAGGCACCTCCTGA+AGG | 0.548802 | 4.3:+15056515 | MS.gene08552:CDS |
| ACCTCATGCTAAGAAGGTGA+TGG | 0.549823 | 4.3:+15056322 | MS.gene08552:CDS |
| AGGTTACAGTGTGTGTATCA+TGG | 0.551337 | 4.3:+15056458 | MS.gene08552:CDS |
| CTACTATTACCAGGACTCAC+AGG | 0.551379 | 4.3:-15057958 | None:intergenic |
| AACCATTCCCTGCTTTATTG+CGG | 0.555375 | 4.3:-15059104 | None:intergenic |
| CATAGAAAATTTCTTCCGAA+CGG | 0.556398 | 4.3:-15057920 | None:intergenic |
| GGATTAACTCCAGACCCAAA+AGG | 0.558427 | 4.3:+15057558 | MS.gene08552:CDS |
| TAGTAGTAGTAACCTTGAAG+TGG | 0.559062 | 4.3:+15056205 | MS.gene08552:CDS |
| CTAGAGAACAGCTTATGGAC+AGG | 0.559328 | 4.3:+15058491 | MS.gene08552:CDS |
| GGGATAGGAATGAGGGTGCA+TGG | 0.563269 | 4.3:+15056366 | MS.gene08552:CDS |
| ATCAATTTCTGGTATGAATG+GGG | 0.563979 | 4.3:-15056967 | None:intergenic |
| GATTCAAAGATATTATTACA+AGG | 0.564688 | 4.3:+15056937 | MS.gene08552:CDS |
| GTGAATAATGCTGATAGAGA+AGG | 0.565634 | 4.3:+15057668 | MS.gene08552:intron |
| TACAGTGTGTGTATCATGGT+TGG | 0.568463 | 4.3:+15056462 | MS.gene08552:CDS |
| ATGTTGTTATATGGTGGGAT+AGG | 0.569147 | 4.3:+15056351 | MS.gene08552:CDS |
| GAAGGATTGATCAATGGGGT+AGG | 0.572052 | 4.3:+15056438 | MS.gene08552:CDS |
| CAACACTTCCATTAATCCGT+GGG | 0.573800 | 4.3:+15056126 | MS.gene08552:CDS |
| CCCATCACCTTCTTAGCATG+AGG | 0.577710 | 4.3:-15056323 | None:intergenic |
| TGTTCTCTAGGAGGTGTAGG+AGG | 0.578002 | 4.3:-15058478 | None:intergenic |
| AGCTGTTCTCTAGGAGGTGT+AGG | 0.578889 | 4.3:-15058481 | None:intergenic |
| TACTTTCATTCGCATTGTCG+CGG | 0.580974 | 4.3:+15059164 | MS.gene08552:CDS |
| CCTCATGCTAAGAAGGTGAT+GGG | 0.582338 | 4.3:+15056323 | MS.gene08552:CDS |
| TCAACACTTCCATTAATCCG+TGG | 0.582388 | 4.3:+15056125 | MS.gene08552:CDS |
| AATTGATGTTGTTATATGGT+GGG | 0.583888 | 4.3:+15056346 | MS.gene08552:CDS |
| CACTTGTGAGTTGAAGAACA+TGG | 0.584686 | 4.3:-15056099 | None:intergenic |
| GAATTGATGTTGTTATATGG+TGG | 0.587435 | 4.3:+15056345 | MS.gene08552:CDS |
| TCAATCCTTCCTTCAGACAA+AGG | 0.589654 | 4.3:-15056425 | None:intergenic |
| CAGGTTCAGAGAAATTTGAC+TGG | 0.594416 | 4.3:+15056249 | MS.gene08552:CDS |
| GTAATAATATCTTTGAATCG+AGG | 0.598480 | 4.3:-15056933 | None:intergenic |
| TCGACAAAATTGTACCGCGA+TGG | 0.598932 | 4.3:+15058019 | MS.gene08552:CDS |
| TCCATAAGCTGTTCTCTAGG+AGG | 0.599001 | 4.3:-15058487 | None:intergenic |
| TTGTGCAGAATAATATCTTG+TGG | 0.604851 | 4.3:+15056892 | MS.gene08552:CDS |
| GGTACTGATTGAAAACCTCA+TGG | 0.605597 | 4.3:+15057506 | MS.gene08552:CDS |
| TCTTCAATTGAGAAATCAAG+TGG | 0.606160 | 4.3:-15057698 | None:intergenic |
| ATATGGTGGGATAGGAATGA+GGG | 0.629185 | 4.3:+15056359 | MS.gene08552:CDS |
| CTATAAGAGCCTCAATGTGG+TGG | 0.632112 | 4.3:+15059036 | MS.gene08552:CDS |
| TGTGCATATGGAACATGTGA+AGG | 0.634120 | 4.3:-15057531 | None:intergenic |
| GGTCCTTCAGGAGGTGCCTG+AGG | 0.637367 | 4.3:-15056518 | None:intergenic |
| GAACAGGTACTGGAGCCATA+CGG | 0.641416 | 4.3:+15058988 | MS.gene08552:intron |
| GCATCACTTCCACCACATTG+AGG | 0.645928 | 4.3:-15059045 | None:intergenic |
| TAAAAGGAATTACCTCAACA+TGG | 0.650469 | 4.3:-15058092 | None:intergenic |
| TCAATTTCTGGTATGAATGG+GGG | 0.651927 | 4.3:-15056966 | None:intergenic |
| GGTGATCAAGTTGATTGGAG+AGG | 0.656464 | 4.3:+15058436 | MS.gene08552:CDS |
| AACATGCAATTTCAGGTACG+AGG | 0.660550 | 4.3:+15057485 | MS.gene08552:intron |
| ATTGTTGCCGCAATAAAGCA+GGG | 0.660696 | 4.3:+15059097 | MS.gene08552:CDS |
| GCTAGTGGGATGTGAAGTGA+AGG | 0.662430 | 4.3:-15056047 | None:intergenic |
| GTGCATATGGAACATGTGAA+GGG | 0.665250 | 4.3:-15057530 | None:intergenic |
| TGTTAATGGAGAAGGTGACA+AGG | 0.682450 | 4.3:-15056177 | None:intergenic |
| CCGCGATGGATTCTTCATGT+GGG | 0.687009 | 4.3:+15058033 | MS.gene08552:CDS |
| GAACATGTGAAGGGTCCATG+AGG | 0.693173 | 4.3:-15057521 | None:intergenic |
| AATTTGACTGGTACTCACAG+TGG | 0.710936 | 4.3:+15056261 | MS.gene08552:CDS |
| GTTACCGGAGGTCCTTCAGG+AGG | 0.716989 | 4.3:-15056527 | None:intergenic |
| AGCCTATAAGAGCCTCAATG+TGG | 0.719694 | 4.3:+15059033 | MS.gene08552:CDS |
| TTGGAGAGGAAAATATAGTG+GGG | 0.734428 | 4.3:+15058450 | MS.gene08552:CDS |
| CCCACATGAAGAATCCATCG+CGG | 0.771717 | 4.3:-15058033 | None:intergenic |
| GAAGGAAGGATTGATCAATG+GGG | 0.807729 | 4.3:+15056434 | MS.gene08552:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTGACAAAATTATA+CGG | + | chr4.3:15057401-15057420 | MS.gene08552:intron | 10.0% |
| !! | AAAAACTTCACATATATTAA+AGG | - | chr4.3:15058592-15058611 | None:intergenic | 15.0% |
| !! | AGAAATTATTAAATTTGAAC+AGG | + | chr4.3:15058972-15058991 | MS.gene08552:intron | 15.0% |
| !! | ATAATTAAAATGTAGTTGTT+TGG | - | chr4.3:15057367-15057386 | None:intergenic | 15.0% |
| !!! | AAAAATGTTTGTTACTTAAA+GGG | + | chr4.3:15056587-15056606 | MS.gene08552:intron | 15.0% |
| !!! | ACAACTACATTTTAATTATA+CGG | + | chr4.3:15057368-15057387 | MS.gene08552:intron | 15.0% |
| !!! | GTATTTTTTTTCAATAGATT+AGG | + | chr4.3:15058263-15058282 | MS.gene08552:intron | 15.0% |
| !!! | TAATGTTACTAACTTTTTTT+AGG | + | chr4.3:15058303-15058322 | MS.gene08552:intron | 15.0% |
| !!! | TTTTTAGGAACAAAAAATAA+TGG | + | chr4.3:15058318-15058337 | MS.gene08552:intron | 15.0% |
| !! | AAAGTTAGTAACATTATTTG+AGG | - | chr4.3:15058299-15058318 | None:intergenic | 20.0% |
| !! | AAATTAAAATCATACCCATA+AGG | - | chr4.3:15057032-15057051 | None:intergenic | 20.0% |
| !! | ACTAATCTGTGAATTATAAA+AGG | - | chr4.3:15058111-15058130 | None:intergenic | 20.0% |
| !! | ATAATTTCTAATCAAGAACA+TGG | - | chr4.3:15058961-15058980 | None:intergenic | 20.0% |
| !! | CTATATAAATAAAAGATGCT+TGG | - | chr4.3:15057782-15057801 | None:intergenic | 20.0% |
| !! | GAAAGATATACTATTATGTT+AGG | - | chr4.3:15057455-15057474 | None:intergenic | 20.0% |
| !! | GATTCAAAGATATTATTACA+AGG | + | chr4.3:15056937-15056956 | MS.gene08552:CDS | 20.0% |
| !! | TATAATAAGTTATCCAAGAA+AGG | - | chr4.3:15058827-15058846 | None:intergenic | 20.0% |
| !! | TGCAATTTAGTGTTAAAAAA+TGG | + | chr4.3:15056677-15056696 | MS.gene08552:intron | 20.0% |
| !!! | AAGAACATGGATTTTTTTAA+TGG | - | chr4.3:15056089-15056108 | None:intergenic | 20.0% |
| !!! | AATATGCTGAAAACATATTT+TGG | - | chr4.3:15058797-15058816 | None:intergenic | 20.0% |
| !!! | GAAAAATGTTTGTTACTTAA+AGG | + | chr4.3:15056586-15056605 | MS.gene08552:intron | 20.0% |
| !!! | TGATATAATTATTGATGATC+TGG | + | chr4.3:15057141-15057160 | MS.gene08552:intron | 20.0% |
| !!! | TTAACACTAAATTGCATTTT+TGG | - | chr4.3:15056673-15056692 | None:intergenic | 20.0% |
| !!! | TTTTACACTTGAAAATCTAT+TGG | - | chr4.3:15058647-15058666 | None:intergenic | 20.0% |
| ! | AAAAATGCTATAAACTCATG+AGG | + | chr4.3:15057330-15057349 | MS.gene08552:intron | 25.0% |
| ! | AATATGTGATCTTGACAAAA+GGG | + | chr4.3:15056298-15056317 | MS.gene08552:CDS | 25.0% |
| ! | AATTGATGTTGTTATATGGT+GGG | + | chr4.3:15056346-15056365 | MS.gene08552:CDS | 25.0% |
| ! | ACAATATCAAATTCAATCAC+TGG | + | chr4.3:15058241-15058260 | MS.gene08552:intron | 25.0% |
| ! | AGTTTATGCAAAAGTAAATG+AGG | - | chr4.3:15056817-15056836 | None:intergenic | 25.0% |
| ! | ATTGAAGAGTTAGATATCAA+TGG | + | chr4.3:15057713-15057732 | MS.gene08552:CDS | 25.0% |
| ! | CAAAACCCAAAATTAGTTAA+GGG | + | chr4.3:15056646-15056665 | MS.gene08552:intron | 25.0% |
| ! | CATGATAACAAAACAAACAA+TGG | - | chr4.3:15056790-15056809 | None:intergenic | 25.0% |
| ! | GTAATAATATCTTTGAATCG+AGG | - | chr4.3:15056936-15056955 | None:intergenic | 25.0% |
| ! | GTGTCATATATGAAACAAAT+AGG | - | chr4.3:15057627-15057646 | None:intergenic | 25.0% |
| ! | TAACTCACATAAGATTGAAT+TGG | + | chr4.3:15058518-15058537 | MS.gene08552:intron | 25.0% |
| ! | TAGTAACATTATTTGAGGAA+TGG | - | chr4.3:15058294-15058313 | None:intergenic | 25.0% |
| ! | TATAAATAAAAGATGCTTGG+TGG | - | chr4.3:15057779-15057798 | None:intergenic | 25.0% |
| ! | TATTAAATTTGAACAGGTAC+TGG | + | chr4.3:15058978-15058997 | MS.gene08552:intron | 25.0% |
| ! | TTAATTGAACATGCAATTTC+AGG | + | chr4.3:15057478-15057497 | MS.gene08552:intron | 25.0% |
| !! | AATGTGTAACAATTTGCTTT+AGG | + | chr4.3:15056716-15056735 | MS.gene08552:intron | 25.0% |
| !! | ACTTATTTGAGTTTGTTTAG+TGG | + | chr4.3:15058710-15058729 | MS.gene08552:intron | 25.0% |
| !! | AGAATAATATCTTGTGGTTT+TGG | + | chr4.3:15056898-15056917 | MS.gene08552:CDS | 25.0% |
| !! | ATGTATATATGTCTACCTTT+TGG | - | chr4.3:15057576-15057595 | None:intergenic | 25.0% |
| !! | ATGTGTAACAATTTGCTTTA+GGG | + | chr4.3:15056717-15056736 | MS.gene08552:intron | 25.0% |
| !! | CAAACATTTTTCTTCAAAGA+CGG | - | chr4.3:15056578-15056597 | None:intergenic | 25.0% |
| !! | GGTTTACTTTATTTGATCAA+CGG | - | chr4.3:15058138-15058157 | None:intergenic | 25.0% |
| !! | GTTTACTTTATTTGATCAAC+GGG | - | chr4.3:15058137-15058156 | None:intergenic | 25.0% |
| !! | TGCTAAAAATTTGTTCTATC+TGG | + | chr4.3:15058683-15058702 | MS.gene08552:intron | 25.0% |
| !! | TGTATATATGTCTACCTTTT+GGG | - | chr4.3:15057575-15057594 | None:intergenic | 25.0% |
| !!! | AATTATTGATGATCTGGTTT+TGG | + | chr4.3:15057147-15057166 | MS.gene08552:intron | 25.0% |
| !!! | ATTTGCACTCAGTTTTATAT+AGG | + | chr4.3:15057864-15057883 | MS.gene08552:intron | 25.0% |
| !!! | GCTTAATGTAATTGTTTTAG+TGG | + | chr4.3:15057110-15057129 | MS.gene08552:intron | 25.0% |
| !!! | TTGTGATTGGTTTTAGAAAA+TGG | + | chr4.3:15058398-15058417 | MS.gene08552:CDS | 25.0% |
| AAACATTGTCTAAATGCAAC+AGG | + | chr4.3:15058927-15058946 | MS.gene08552:intron | 30.0% | |
| AAATCCAACACATATGCATA+TGG | + | chr4.3:15057083-15057102 | MS.gene08552:intron | 30.0% | |
| AAGAAATTCTATAGTTGTGC+TGG | + | chr4.3:15059138-15059157 | MS.gene08552:CDS | 30.0% | |
| AGCATGCAAATTATGCTATA+GGG | - | chr4.3:15057221-15057240 | None:intergenic | 30.0% | |
| AGTCATATAAGCTAACTGTT+TGG | + | chr4.3:15057424-15057443 | MS.gene08552:intron | 30.0% | |
| AGTTATGCTGTCATAGATAA+TGG | + | chr4.3:15058178-15058197 | MS.gene08552:intron | 30.0% | |
| ATATTATTCTGCACAATGCT+TGG | - | chr4.3:15056888-15056907 | None:intergenic | 30.0% | |
| ATCATATCAGTTGCTTCAAT+TGG | + | chr4.3:15059073-15059092 | MS.gene08552:CDS | 30.0% | |
| ATTGGAGAGGAAAATATAGT+GGG | + | chr4.3:15058449-15058468 | MS.gene08552:CDS | 30.0% | |
| CAATATGTGATCTTGACAAA+AGG | + | chr4.3:15056297-15056316 | MS.gene08552:CDS | 30.0% | |
| CATAAGATTGAATTGGAACA+TGG | + | chr4.3:15058525-15058544 | MS.gene08552:intron | 30.0% | |
| CATAGAAAATTTCTTCCGAA+CGG | - | chr4.3:15057923-15057942 | None:intergenic | 30.0% | |
| CTACTACTAGAATCTGTTAA+TGG | - | chr4.3:15056194-15056213 | None:intergenic | 30.0% | |
| GAAACAGAGATATTCCTTAT+GGG | + | chr4.3:15057015-15057034 | MS.gene08552:CDS | 30.0% | |
| GAATTGATGTTGTTATATGG+TGG | + | chr4.3:15056345-15056364 | MS.gene08552:CDS | 30.0% | |
| GCAAAACCCAAAATTAGTTA+AGG | + | chr4.3:15056645-15056664 | MS.gene08552:intron | 30.0% | |
| TAAAAGGAATTACCTCAACA+TGG | - | chr4.3:15058095-15058114 | None:intergenic | 30.0% | |
| TAGCATGCAAATTATGCTAT+AGG | - | chr4.3:15057222-15057241 | None:intergenic | 30.0% | |
| TCATATCAGTTGCTTCAATT+GGG | + | chr4.3:15059074-15059093 | MS.gene08552:CDS | 30.0% | |
| TCTTCAATTGAGAAATCAAG+TGG | - | chr4.3:15057701-15057720 | None:intergenic | 30.0% | |
| TGGGAATTGATGTTGTTATA+TGG | + | chr4.3:15056342-15056361 | MS.gene08552:CDS | 30.0% | |
| TGTTGCATTTAGACAATGTT+TGG | - | chr4.3:15058928-15058947 | None:intergenic | 30.0% | |
| TTGTGCAGAATAATATCTTG+TGG | + | chr4.3:15056892-15056911 | MS.gene08552:CDS | 30.0% | |
| TTTATATCTTCTCCATGTTG+AGG | + | chr4.3:15058080-15058099 | MS.gene08552:CDS | 30.0% | |
| ! | AAATGGTTAAAGAAGTATGC+AGG | + | chr4.3:15058415-15058434 | MS.gene08552:CDS | 30.0% |
| ! | CTTTTGTCAAGATCACATAT+TGG | - | chr4.3:15056299-15056318 | None:intergenic | 30.0% |
| ! | TTGGTCCCTTAACTAATTTT+GGG | - | chr4.3:15056654-15056673 | None:intergenic | 30.0% |
| ! | TTTGGTCCCTTAACTAATTT+TGG | - | chr4.3:15056655-15056674 | None:intergenic | 30.0% |
| ! | TTTGTGTTTTATGTGCTAGT+GGG | - | chr4.3:15056064-15056083 | None:intergenic | 30.0% |
| !! | AATGATGGATCATCAATTTC+TGG | - | chr4.3:15056981-15057000 | None:intergenic | 30.0% |
| !! | ATCAATTTCTGGTATGAATG+GGG | - | chr4.3:15056970-15056989 | None:intergenic | 30.0% |
| !! | CATCAATTTCTGGTATGAAT+GGG | - | chr4.3:15056971-15056990 | None:intergenic | 30.0% |
| !! | GAACAAAAAATAATGGATGC+TGG | + | chr4.3:15058325-15058344 | MS.gene08552:CDS | 30.0% |
| !! | TATCATGGTTGGTGTTTTAA+TGG | + | chr4.3:15056473-15056492 | MS.gene08552:CDS | 30.0% |
| !! | TCATCAATTTCTGGTATGAA+TGG | - | chr4.3:15056972-15056991 | None:intergenic | 30.0% |
| !!! | ACTAATTTTGGGTTTTGCTT+TGG | - | chr4.3:15056643-15056662 | None:intergenic | 30.0% |
| AAGTTATCCAAGAAAGGTTG+TGG | - | chr4.3:15058821-15058840 | None:intergenic | 35.0% | |
| AATAATGCTGATAGAGAAGG+AGG | + | chr4.3:15057671-15057690 | MS.gene08552:CDS | 35.0% | |
| AATGGTTTCACTGCAAATCA+GGG | + | chr4.3:15057731-15057750 | MS.gene08552:CDS | 35.0% | |
| ACATCTGTTTCGTTTCACTT+TGG | - | chr4.3:15056614-15056633 | None:intergenic | 35.0% | |
| AGATCACATATTGGCATCAA+AGG | - | chr4.3:15056290-15056309 | None:intergenic | 35.0% | |
| CAAATCAGTCTACTATTACC+AGG | - | chr4.3:15057970-15057989 | None:intergenic | 35.0% | |
| CATATTTCCACAACCTTTCT+TGG | + | chr4.3:15058811-15058830 | MS.gene08552:intron | 35.0% | |
| CTAGAATCTGTTAATGGAGA+AGG | - | chr4.3:15056188-15056207 | None:intergenic | 35.0% | |
| CTGGTAATAGTAGACTGATT+TGG | + | chr4.3:15057968-15057987 | MS.gene08552:CDS | 35.0% | |
| GATTGGAGAGGAAAATATAG+TGG | + | chr4.3:15058448-15058467 | MS.gene08552:CDS | 35.0% | |
| GGAAACAGAGATATTCCTTA+TGG | + | chr4.3:15057014-15057033 | MS.gene08552:CDS | 35.0% | |
| GTGAAACGAAACAGATGTAA+AGG | + | chr4.3:15056616-15056635 | MS.gene08552:intron | 35.0% | |
| GTGAATAATGCTGATAGAGA+AGG | + | chr4.3:15057668-15057687 | MS.gene08552:intron | 35.0% | |
| GTTAATCCATAGTGTGCATA+TGG | - | chr4.3:15057546-15057565 | None:intergenic | 35.0% | |
| TAATGCAGAAATCATCCGTT+CGG | + | chr4.3:15057905-15057924 | MS.gene08552:intron | 35.0% | |
| TAGTAGTAGTAACCTTGAAG+TGG | + | chr4.3:15056205-15056224 | MS.gene08552:CDS | 35.0% | |
| TATGCCATATGCATATGTGT+TGG | - | chr4.3:15057090-15057109 | None:intergenic | 35.0% | |
| TGAAGGAAGGATTGATCAAT+GGG | + | chr4.3:15056433-15056452 | MS.gene08552:CDS | 35.0% | |
| TGCATCTTCTGTTGAAACTA+AGG | + | chr4.3:15057817-15057836 | MS.gene08552:CDS | 35.0% | |
| TGGTCAAGAAAATTGGCATA+AGG | + | chr4.3:15058345-15058364 | MS.gene08552:CDS | 35.0% | |
| TTAGTGGCATAAACACTTGT+AGG | + | chr4.3:15058726-15058745 | MS.gene08552:intron | 35.0% | |
| TTGAATCGAGGATCAGTATT+TGG | - | chr4.3:15056924-15056943 | None:intergenic | 35.0% | |
| TTGGAGAGGAAAATATAGTG+GGG | + | chr4.3:15058450-15058469 | MS.gene08552:CDS | 35.0% | |
| TTTACACTGCAACACATCTA+TGG | - | chr4.3:15056758-15056777 | None:intergenic | 35.0% | |
| ! | ACATTTTTCTTCAAAGACGG+CGG | - | chr4.3:15056575-15056594 | None:intergenic | 35.0% |
| ! | ATGTTGTTATATGGTGGGAT+AGG | + | chr4.3:15056351-15056370 | MS.gene08552:CDS | 35.0% |
| ! | CCATCATTTGCTAGCTTAAT+GGG | + | chr4.3:15056993-15057012 | MS.gene08552:CDS | 35.0% |
| ! | GTTTGTGTTTTATGTGCTAG+TGG | - | chr4.3:15056065-15056084 | None:intergenic | 35.0% |
| ! | TCCATCATTTGCTAGCTTAA+TGG | + | chr4.3:15056992-15057011 | MS.gene08552:CDS | 35.0% |
| !! | TCAATTTCTGGTATGAATGG+GGG | - | chr4.3:15056969-15056988 | None:intergenic | 35.0% |
| !!! | TGAATTTTGAAGTGTTCCCA+CGG | - | chr4.3:15056145-15056164 | None:intergenic | 35.0% |
| AACCATCACACTTGCAGATT+TGG | + | chr4.3:15058154-15058173 | MS.gene08552:intron | 40.0% | |
| AACTCTTGCAATTCACCGTA+TGG | - | chr4.3:15059006-15059025 | None:intergenic | 40.0% | |
| AATTTGACTGGTACTCACAG+TGG | + | chr4.3:15056261-15056280 | MS.gene08552:CDS | 40.0% | |
| ACAGAAGATGCAAGTTCATC+TGG | - | chr4.3:15057809-15057828 | None:intergenic | 40.0% | |
| ACCATCACACTTGCAGATTT+GGG | + | chr4.3:15058155-15058174 | MS.gene08552:intron | 40.0% | |
| ACCCACAGTCCAAAATTTCT+CGG | - | chr4.3:15058000-15058019 | None:intergenic | 40.0% | |
| AGATTAGCACCTTTGTCTGA+AGG | + | chr4.3:15056416-15056435 | MS.gene08552:CDS | 40.0% | |
| AGGTTACAGTGTGTGTATCA+TGG | + | chr4.3:15056458-15056477 | MS.gene08552:CDS | 40.0% | |
| ATTGTTGCCGCAATAAAGCA+GGG | + | chr4.3:15059097-15059116 | MS.gene08552:CDS | 40.0% | |
| ATTTGTATTCCTGTGAGTCC+TGG | + | chr4.3:15057949-15057968 | MS.gene08552:CDS | 40.0% | |
| CAACACTTCCATTAATCCGT+GGG | + | chr4.3:15056126-15056145 | MS.gene08552:CDS | 40.0% | |
| CAATGGTTTCACTGCAAATC+AGG | + | chr4.3:15057730-15057749 | MS.gene08552:CDS | 40.0% | |
| CAGGTTCAGAGAAATTTGAC+TGG | + | chr4.3:15056249-15056268 | MS.gene08552:CDS | 40.0% | |
| CATGTTCCATATGCACACTA+TGG | + | chr4.3:15057537-15057556 | MS.gene08552:CDS | 40.0% | |
| CCCATTAAGCTAGCAAATGA+TGG | - | chr4.3:15056996-15057015 | None:intergenic | 40.0% | |
| CTGAAGGAAGGATTGATCAA+TGG | + | chr4.3:15056432-15056451 | MS.gene08552:CDS | 40.0% | |
| GAAGGAAGGATTGATCAATG+GGG | + | chr4.3:15056434-15056453 | MS.gene08552:CDS | 40.0% | |
| GATGAACCAGAAGTTGAAAC+AGG | + | chr4.3:15056230-15056249 | MS.gene08552:CDS | 40.0% | |
| GCATGCTATGCTACTATTCT+AGG | + | chr4.3:15057234-15057253 | MS.gene08552:intron | 40.0% | |
| GTGCATATGGAACATGTGAA+GGG | - | chr4.3:15057533-15057552 | None:intergenic | 40.0% | |
| TACAGTGTGTGTATCATGGT+TGG | + | chr4.3:15056462-15056481 | MS.gene08552:CDS | 40.0% | |
| TACTTTCATTCGCATTGTCG+CGG | + | chr4.3:15059164-15059183 | MS.gene08552:CDS | 40.0% | |
| TCAACACTTCCATTAATCCG+TGG | + | chr4.3:15056125-15056144 | MS.gene08552:CDS | 40.0% | |
| TCAATCCTTCCTTCAGACAA+AGG | - | chr4.3:15056428-15056447 | None:intergenic | 40.0% | |
| TCTGAACCTGTTTCAACTTC+TGG | - | chr4.3:15056239-15056258 | None:intergenic | 40.0% | |
| TGATTGCAAGTTCATTCCTC+AGG | + | chr4.3:15056502-15056521 | MS.gene08552:CDS | 40.0% | |
| TGGATGCTGGTCAAGAAAAT+TGG | + | chr4.3:15058338-15058357 | MS.gene08552:CDS | 40.0% | |
| TGTGCATATGGAACATGTGA+AGG | - | chr4.3:15057534-15057553 | None:intergenic | 40.0% | |
| TGTTAATGGAGAAGGTGACA+AGG | - | chr4.3:15056180-15056199 | None:intergenic | 40.0% | |
| ! | AACATGCAATTTCAGGTACG+AGG | + | chr4.3:15057485-15057504 | MS.gene08552:intron | 40.0% |
| ! | AACCATTCCCTGCTTTATTG+CGG | - | chr4.3:15059107-15059126 | None:intergenic | 40.0% |
| ! | ATATGGTGGGATAGGAATGA+GGG | + | chr4.3:15056359-15056378 | MS.gene08552:CDS | 40.0% |
| ! | CACTTGTGAGTTGAAGAACA+TGG | - | chr4.3:15056102-15056121 | None:intergenic | 40.0% |
| ! | TATATGGTGGGATAGGAATG+AGG | + | chr4.3:15056358-15056377 | MS.gene08552:CDS | 40.0% |
| ! | TCCGAGAAATTTTGGACTGT+GGG | + | chr4.3:15057996-15058015 | MS.gene08552:CDS | 40.0% |
| ! | TGGTGCTTTCCGAGAAATTT+TGG | + | chr4.3:15057988-15058007 | MS.gene08552:CDS | 40.0% |
| ! | TGTAGGTTGTGAGACTGTTT+TGG | + | chr4.3:15058743-15058762 | MS.gene08552:intron | 40.0% |
| ! | TTCCGAGAAATTTTGGACTG+TGG | + | chr4.3:15057995-15058014 | MS.gene08552:CDS | 40.0% |
| !! | ATATGTCTACCTTTTGGGTC+TGG | - | chr4.3:15057570-15057589 | None:intergenic | 40.0% |
| !! | ATGCAGGTGATCAAGTTGAT+TGG | + | chr4.3:15058431-15058450 | MS.gene08552:CDS | 40.0% |
| !! | GACAAAGGTGCTAATCTATG+AGG | - | chr4.3:15056413-15056432 | None:intergenic | 40.0% |
| !! | GGCGGTTAAAAAGTATCAGA+AGG | - | chr4.3:15056557-15056576 | None:intergenic | 40.0% |
| !! | GGTACTGATTGAAAACCTCA+TGG | + | chr4.3:15057506-15057525 | MS.gene08552:CDS | 40.0% |
| !! | GTATCAGAAGGACTAGTTAC+CGG | - | chr4.3:15056545-15056564 | None:intergenic | 40.0% |
| !!! | AGCAGCTACACATGCTTTTT+TGG | - | chr4.3:15056862-15056881 | None:intergenic | 40.0% |
| !!! | GGTTGGTGTTTTAATGGATC+AGG | + | chr4.3:15056479-15056498 | MS.gene08552:CDS | 40.0% |
| AAGGCAGATGCTCTTGTGAT+TGG | + | chr4.3:15058385-15058404 | MS.gene08552:CDS | 45.0% | |
| ACCTCATGCTAAGAAGGTGA+TGG | + | chr4.3:15056322-15056341 | MS.gene08552:CDS | 45.0% | |
| ACCTCCTAGAGAACAGCTTA+TGG | + | chr4.3:15058486-15058505 | MS.gene08552:CDS | 45.0% | |
| AGAACAGCTTATGGACAGGT+AGG | + | chr4.3:15058495-15058514 | MS.gene08552:intron | 45.0% | |
| AGCCTATAAGAGCCTCAATG+TGG | + | chr4.3:15059033-15059052 | MS.gene08552:CDS | 45.0% | |
| CACCACATTGAGGCTCTTAT+AGG | - | chr4.3:15059038-15059057 | None:intergenic | 45.0% | |
| CCTCATGCTAAGAAGGTGAT+GGG | + | chr4.3:15056323-15056342 | MS.gene08552:CDS | 45.0% | |
| CTACTATTACCAGGACTCAC+AGG | - | chr4.3:15057961-15057980 | None:intergenic | 45.0% | |
| CTAGAGAACAGCTTATGGAC+AGG | + | chr4.3:15058491-15058510 | MS.gene08552:CDS | 45.0% | |
| CTATAAGAGCCTCAATGTGG+TGG | + | chr4.3:15059036-15059055 | MS.gene08552:CDS | 45.0% | |
| CTGGTTCATCATCCACTTCA+AGG | - | chr4.3:15056220-15056239 | None:intergenic | 45.0% | |
| CTGTCCATAAGCTGTTCTCT+AGG | - | chr4.3:15058493-15058512 | None:intergenic | 45.0% | |
| GAAGGATTGATCAATGGGGT+AGG | + | chr4.3:15056438-15056457 | MS.gene08552:CDS | 45.0% | |
| GATTGTTGCCGCAATAAAGC+AGG | + | chr4.3:15059096-15059115 | MS.gene08552:CDS | 45.0% | |
| GGATTAACTCCAGACCCAAA+AGG | + | chr4.3:15057558-15057577 | MS.gene08552:CDS | 45.0% | |
| GTTTCACTGCAAATCAGGGT+TGG | + | chr4.3:15057735-15057754 | MS.gene08552:CDS | 45.0% | |
| TAGCACCTTTGTCTGAAGGA+AGG | + | chr4.3:15056420-15056439 | MS.gene08552:CDS | 45.0% | |
| TCCATAAGCTGTTCTCTAGG+AGG | - | chr4.3:15058490-15058509 | None:intergenic | 45.0% | |
| TCCCAAATCTGCAAGTGTGA+TGG | - | chr4.3:15058159-15058178 | None:intergenic | 45.0% | |
| TCGACAAAATTGTACCGCGA+TGG | + | chr4.3:15058019-15058038 | MS.gene08552:CDS | 45.0% | |
| TGCCTTTGTTGGCACAAAAC+AGG | - | chr4.3:15058371-15058390 | None:intergenic | 45.0% | |
| ! | GAAGTGTTCCCACGGATTAA+TGG | - | chr4.3:15056137-15056156 | None:intergenic | 45.0% |
| !! | ACAAGAGCATCTGCCTTTGT+TGG | - | chr4.3:15058382-15058401 | None:intergenic | 45.0% |
| !! | GGTGATCAAGTTGATTGGAG+AGG | + | chr4.3:15058436-15058455 | MS.gene08552:CDS | 45.0% |
| CCCACATGAAGAATCCATCG+CGG | - | chr4.3:15058036-15058055 | None:intergenic | 50.0% | |
| CCCATCACCTTCTTAGCATG+AGG | - | chr4.3:15056326-15056345 | None:intergenic | 50.0% | |
| GAACATGTGAAGGGTCCATG+AGG | - | chr4.3:15057524-15057543 | None:intergenic | 50.0% | |
| GCATCACTTCCACCACATTG+AGG | - | chr4.3:15059048-15059067 | None:intergenic | 50.0% | |
| GCTAGTGGGATGTGAAGTGA+AGG | - | chr4.3:15056050-15056069 | None:intergenic | 50.0% | |
| TGCCGCAATAAAGCAGGGAA+TGG | + | chr4.3:15059102-15059121 | MS.gene08552:CDS | 50.0% | |
| ! | ACCGCGATGGATTCTTCATG+TGG | + | chr4.3:15058032-15058051 | MS.gene08552:CDS | 50.0% |
| ! | AGCTGTTCTCTAGGAGGTGT+AGG | - | chr4.3:15058484-15058503 | None:intergenic | 50.0% |
| ! | CCGCGATGGATTCTTCATGT+GGG | + | chr4.3:15058033-15058052 | MS.gene08552:CDS | 50.0% |
| ! | GGCCTGTTTTGTGCCAACAA+AGG | + | chr4.3:15058366-15058385 | MS.gene08552:CDS | 50.0% |
| ! | TGTTCTCTAGGAGGTGTAGG+AGG | - | chr4.3:15058481-15058500 | None:intergenic | 50.0% |
| !! | AAGGGCACCTCATGCTAAGA+AGG | + | chr4.3:15056316-15056335 | MS.gene08552:CDS | 50.0% |
| !! | GAACAGGTACTGGAGCCATA+CGG | + | chr4.3:15058988-15059007 | MS.gene08552:intron | 50.0% |
| !! | TCAGAAGGACTAGTTACCGG+AGG | - | chr4.3:15056542-15056561 | None:intergenic | 50.0% |
| ATTCCTCAGGCACCTCCTGA+AGG | + | chr4.3:15056515-15056534 | MS.gene08552:CDS | 55.0% | |
| CTAGTTACCGGAGGTCCTTC+AGG | - | chr4.3:15056533-15056552 | None:intergenic | 55.0% | |
| ! | GGGATAGGAATGAGGGTGCA+TGG | + | chr4.3:15056366-15056385 | MS.gene08552:CDS | 55.0% |
| GTTACCGGAGGTCCTTCAGG+AGG | - | chr4.3:15056530-15056549 | None:intergenic | 60.0% | |
| GGCACCTCCTGAAGGACCTC+CGG | + | chr4.3:15056523-15056542 | MS.gene08552:CDS | 65.0% | |
| !! | GGTCCTTCAGGAGGTGCCTG+AGG | - | chr4.3:15056521-15056540 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 15056020 | 15059188 | 15056020 | ID=MS.gene08552 |
| chr4.3 | mRNA | 15056020 | 15059188 | 15056020 | ID=MS.gene08552.t1;Parent=MS.gene08552 |
| chr4.3 | exon | 15056020 | 15056544 | 15056020 | ID=MS.gene08552.t1.exon1;Parent=MS.gene08552.t1 |
| chr4.3 | CDS | 15056020 | 15056544 | 15056020 | ID=cds.MS.gene08552.t1;Parent=MS.gene08552.t1 |
| chr4.3 | exon | 15056849 | 15057036 | 15056849 | ID=MS.gene08552.t1.exon2;Parent=MS.gene08552.t1 |
| chr4.3 | CDS | 15056849 | 15057036 | 15056849 | ID=cds.MS.gene08552.t1;Parent=MS.gene08552.t1 |
| chr4.3 | exon | 15057500 | 15057579 | 15057500 | ID=MS.gene08552.t1.exon3;Parent=MS.gene08552.t1 |
| chr4.3 | CDS | 15057500 | 15057579 | 15057500 | ID=cds.MS.gene08552.t1;Parent=MS.gene08552.t1 |
| chr4.3 | exon | 15057669 | 15057838 | 15057669 | ID=MS.gene08552.t1.exon4;Parent=MS.gene08552.t1 |
| chr4.3 | CDS | 15057669 | 15057838 | 15057669 | ID=cds.MS.gene08552.t1;Parent=MS.gene08552.t1 |
| chr4.3 | exon | 15057913 | 15058101 | 15057913 | ID=MS.gene08552.t1.exon5;Parent=MS.gene08552.t1 |
| chr4.3 | CDS | 15057913 | 15058101 | 15057913 | ID=cds.MS.gene08552.t1;Parent=MS.gene08552.t1 |
| chr4.3 | exon | 15058325 | 15058512 | 15058325 | ID=MS.gene08552.t1.exon6;Parent=MS.gene08552.t1 |
| chr4.3 | CDS | 15058325 | 15058512 | 15058325 | ID=cds.MS.gene08552.t1;Parent=MS.gene08552.t1 |
| chr4.3 | exon | 15058994 | 15059188 | 15058994 | ID=MS.gene08552.t1.exon7;Parent=MS.gene08552.t1 |
| chr4.3 | CDS | 15058994 | 15059188 | 15058994 | ID=cds.MS.gene08552.t1;Parent=MS.gene08552.t1 |
| Gene Sequence |
| Protein sequence |
