Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08629.t1 | XP_003606389.1 | 97 | 495 | 14 | 1 | 89 | 582 | 89 | 583 | 3.50E-275 | 957.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08629.t1 | Q9FF55 | 75.9 | 464 | 112 | 0 | 95 | 558 | 98 | 561 | 4.5e-215 | 748.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08629.t1 | G7JPD1 | 97.0 | 495 | 14 | 1 | 89 | 582 | 89 | 583 | 2.5e-275 | 957.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene08629 | MS.gene91774 | PPI |
MS.gene049245 | MS.gene08629 | PPI |
MS.gene64440 | MS.gene08629 | PPI |
MS.gene25997 | MS.gene08629 | PPI |
MS.gene08629 | MS.gene76495 | PPI |
MS.gene013810 | MS.gene08629 | PPI |
MS.gene045060 | MS.gene08629 | PPI |
MS.gene08629 | MS.gene75421 | PPI |
MS.gene08629 | MS.gene40930 | PPI |
MS.gene08629 | MS.gene003513 | PPI |
MS.gene08629 | MS.gene057716 | PPI |
MS.gene08629 | MS.gene022334 | PPI |
MS.gene08629 | MS.gene013275 | PPI |
MS.gene08629 | MS.gene025228 | PPI |
MS.gene08629 | MS.gene52083 | PPI |
MS.gene08629 | MS.gene47817 | PPI |
MS.gene08629 | MS.gene36312 | PPI |
MS.gene08629 | MS.gene06356 | PPI |
MS.gene85112 | MS.gene08629 | PPI |
MS.gene08629 | MS.gene70661 | PPI |
MS.gene037185 | MS.gene08629 | PPI |
MS.gene08629 | MS.gene90970 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08629.t1 | MTR_4g059450 | 96.068 | 585 | 18 | 4 | 1 | 582 | 1 | 583 | 0.0 | 1122 |
MS.gene08629.t1 | MTR_2g094180 | 73.321 | 551 | 129 | 3 | 36 | 582 | 28 | 564 | 0.0 | 776 |
MS.gene08629.t1 | MTR_2g101880 | 33.468 | 496 | 307 | 7 | 76 | 554 | 28 | 517 | 1.24e-89 | 286 |
MS.gene08629.t1 | MTR_3g088220 | 34.172 | 477 | 272 | 15 | 93 | 545 | 25 | 483 | 9.81e-68 | 228 |
MS.gene08629.t1 | MTR_2g093500 | 30.194 | 361 | 212 | 3 | 194 | 554 | 197 | 517 | 1.25e-49 | 180 |
MS.gene08629.t1 | MTR_1g096790 | 31.731 | 312 | 183 | 10 | 94 | 391 | 20 | 315 | 9.52e-25 | 107 |
MS.gene08629.t1 | MTR_1g087520 | 43.885 | 139 | 66 | 5 | 102 | 236 | 149 | 279 | 1.71e-19 | 90.9 |
MS.gene08629.t1 | MTR_1g087520 | 45.455 | 88 | 46 | 1 | 440 | 525 | 149 | 236 | 3.02e-18 | 87.0 |
MS.gene08629.t1 | MTR_1g087520 | 37.097 | 124 | 74 | 3 | 105 | 225 | 34 | 156 | 6.89e-18 | 85.9 |
MS.gene08629.t1 | MTR_1g087520 | 36.000 | 100 | 55 | 4 | 447 | 542 | 38 | 132 | 4.68e-12 | 68.2 |
MS.gene08629.t1 | MTR_7g112040 | 33.140 | 172 | 95 | 5 | 101 | 253 | 25 | 195 | 5.66e-19 | 89.4 |
MS.gene08629.t1 | MTR_7g112040 | 33.508 | 191 | 95 | 7 | 343 | 525 | 65 | 231 | 5.45e-18 | 86.3 |
MS.gene08629.t1 | MTR_7g112040 | 38.272 | 162 | 83 | 7 | 102 | 254 | 144 | 297 | 2.10e-15 | 78.6 |
MS.gene08629.t1 | MTR_7g112040 | 36.111 | 108 | 60 | 4 | 439 | 542 | 25 | 127 | 6.84e-13 | 70.9 |
MS.gene08629.t1 | MTR_5g084930 | 33.333 | 168 | 90 | 5 | 113 | 271 | 172 | 326 | 9.10e-17 | 83.2 |
MS.gene08629.t1 | MTR_5g084930 | 48.421 | 95 | 40 | 5 | 102 | 191 | 30 | 120 | 2.94e-16 | 81.6 |
MS.gene08629.t1 | MTR_5g084930 | 32.061 | 131 | 83 | 2 | 446 | 576 | 36 | 160 | 4.10e-12 | 68.9 |
MS.gene08629.t1 | MTR_5g084930 | 25.296 | 253 | 163 | 8 | 307 | 541 | 15 | 259 | 1.32e-11 | 67.4 |
MS.gene08629.t1 | MTR_2g021750 | 47.000 | 100 | 44 | 5 | 102 | 196 | 30 | 125 | 5.05e-15 | 77.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene08629.t1 | AT5G60640 | 71.042 | 518 | 138 | 2 | 77 | 582 | 80 | 597 | 0.0 | 761 |
MS.gene08629.t1 | AT5G60640 | 73.230 | 452 | 121 | 0 | 77 | 528 | 80 | 531 | 0.0 | 699 |
MS.gene08629.t1 | AT3G54960 | 60.000 | 570 | 194 | 9 | 12 | 562 | 13 | 567 | 0.0 | 683 |
MS.gene08629.t1 | AT3G54960 | 59.136 | 509 | 180 | 8 | 12 | 507 | 13 | 506 | 0.0 | 604 |
MS.gene08629.t1 | AT5G60640 | 60.425 | 518 | 129 | 7 | 77 | 582 | 80 | 533 | 0.0 | 601 |
MS.gene08629.t1 | AT1G52260 | 34.396 | 439 | 282 | 4 | 90 | 522 | 64 | 502 | 1.29e-88 | 284 |
MS.gene08629.t1 | AT3G16110 | 33.724 | 427 | 280 | 2 | 99 | 522 | 74 | 500 | 9.30e-86 | 276 |
MS.gene08629.t1 | AT1G21750 | 36.667 | 480 | 263 | 20 | 93 | 547 | 22 | 485 | 2.02e-75 | 248 |
MS.gene08629.t1 | AT1G21750 | 37.419 | 465 | 254 | 18 | 102 | 545 | 32 | 480 | 3.96e-75 | 248 |
MS.gene08629.t1 | AT1G77510 | 35.130 | 501 | 282 | 19 | 102 | 582 | 31 | 508 | 2.67e-73 | 243 |
MS.gene08629.t1 | AT2G47470 | 39.394 | 165 | 83 | 6 | 100 | 255 | 141 | 297 | 9.04e-23 | 100 |
MS.gene08629.t1 | AT2G47470 | 46.591 | 88 | 45 | 1 | 439 | 524 | 142 | 229 | 6.39e-19 | 89.0 |
MS.gene08629.t1 | AT2G47470 | 34.559 | 136 | 78 | 4 | 105 | 229 | 28 | 163 | 1.16e-17 | 85.1 |
MS.gene08629.t1 | AT2G47470 | 32.653 | 98 | 62 | 2 | 457 | 552 | 41 | 136 | 1.77e-11 | 66.2 |
MS.gene08629.t1 | AT2G47470 | 37.912 | 182 | 91 | 6 | 100 | 266 | 141 | 315 | 3.33e-22 | 98.2 |
MS.gene08629.t1 | AT2G47470 | 46.591 | 88 | 45 | 1 | 439 | 524 | 142 | 229 | 6.11e-19 | 88.6 |
MS.gene08629.t1 | AT2G47470 | 34.559 | 136 | 78 | 4 | 105 | 229 | 28 | 163 | 1.36e-17 | 84.7 |
MS.gene08629.t1 | AT2G47470 | 32.653 | 98 | 62 | 2 | 457 | 552 | 41 | 136 | 1.90e-11 | 66.2 |
MS.gene08629.t1 | AT2G47470 | 37.288 | 177 | 94 | 6 | 100 | 267 | 141 | 309 | 3.98e-22 | 98.6 |
MS.gene08629.t1 | AT2G47470 | 46.591 | 88 | 45 | 1 | 439 | 524 | 142 | 229 | 8.76e-19 | 88.6 |
MS.gene08629.t1 | AT2G47470 | 34.559 | 136 | 78 | 4 | 105 | 229 | 28 | 163 | 1.90e-17 | 84.7 |
MS.gene08629.t1 | AT2G47470 | 32.653 | 98 | 62 | 2 | 457 | 552 | 41 | 136 | 2.18e-11 | 66.2 |
MS.gene08629.t1 | AT2G47470 | 42.105 | 133 | 66 | 4 | 100 | 228 | 141 | 266 | 2.25e-21 | 94.7 |
MS.gene08629.t1 | AT2G47470 | 46.591 | 88 | 45 | 1 | 439 | 524 | 142 | 229 | 3.12e-19 | 88.2 |
MS.gene08629.t1 | AT2G47470 | 32.738 | 168 | 93 | 6 | 105 | 253 | 28 | 194 | 7.10e-18 | 84.3 |
MS.gene08629.t1 | AT2G47470 | 32.653 | 98 | 62 | 2 | 457 | 552 | 41 | 136 | 1.35e-11 | 65.9 |
MS.gene08629.t1 | AT2G32920 | 33.862 | 189 | 102 | 7 | 93 | 271 | 155 | 330 | 2.92e-18 | 88.2 |
MS.gene08629.t1 | AT2G32920 | 40.566 | 106 | 58 | 4 | 102 | 204 | 32 | 135 | 1.35e-15 | 79.7 |
MS.gene08629.t1 | AT2G32920 | 30.370 | 135 | 88 | 2 | 443 | 576 | 35 | 164 | 1.84e-11 | 67.0 |
MS.gene08629.t1 | AT1G35620 | 39.091 | 110 | 65 | 1 | 102 | 209 | 34 | 143 | 1.72e-17 | 85.9 |
MS.gene08629.t1 | AT1G04980 | 33.929 | 168 | 89 | 6 | 113 | 271 | 181 | 335 | 4.89e-17 | 84.3 |
MS.gene08629.t1 | AT1G04980 | 40.187 | 107 | 57 | 4 | 102 | 204 | 34 | 137 | 4.83e-16 | 81.3 |
MS.gene08629.t1 | AT1G04980 | 33.835 | 133 | 83 | 2 | 446 | 576 | 40 | 169 | 4.29e-14 | 75.1 |
MS.gene08629.t1 | AT1G04980 | 33.333 | 96 | 62 | 1 | 446 | 541 | 175 | 268 | 2.39e-11 | 66.6 |
MS.gene08629.t1 | AT4G27080 | 31.250 | 160 | 88 | 5 | 66 | 206 | 108 | 264 | 4.40e-14 | 75.5 |
MS.gene08629.t1 | AT4G27080 | 31.250 | 160 | 88 | 5 | 66 | 206 | 160 | 316 | 5.50e-14 | 75.1 |
Find 131 sgRNAs with CRISPR-Local
Find 345 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGAAAACGACGAGTCGTTTA+TGG | 0.182963 | 4.1:+39126159 | None:intergenic |
TTCTGAAACTAAAGTTGTTT+TGG | 0.191689 | 4.1:-39125134 | MS.gene08629:CDS |
TAGAAGTTGAGGTTGGTTTC+TGG | 0.191707 | 4.1:+39121442 | None:intergenic |
ATAGAATGACTTACACTTTC+GGG | 0.207213 | 4.1:+39122262 | None:intergenic |
AAGCCTGTTGCAGATTATTT+TGG | 0.227597 | 4.1:-39122681 | MS.gene08629:CDS |
CATCGTCGTCGATGTCGTTT+TGG | 0.248131 | 4.1:+39126078 | None:intergenic |
AAGAAATGTACTTAGTTCTT+TGG | 0.251971 | 4.1:+39125601 | None:intergenic |
GAGGAGAAACTGAACCATTT+TGG | 0.275627 | 4.1:-39124640 | MS.gene08629:intron |
GGCTCATGAGTATAATGTTC+AGG | 0.292353 | 4.1:-39125676 | MS.gene08629:CDS |
CCAATTACCTGTTTCTTGAT+TGG | 0.297414 | 4.1:+39124417 | None:intergenic |
AAAGCAGGGCGCTTGACATC+TGG | 0.311261 | 4.1:+39124682 | None:intergenic |
TGACTTACACTTTCGGGAAT+AGG | 0.324123 | 4.1:+39122268 | None:intergenic |
TGTGTGGTGGTGGTGTCTTC+TGG | 0.350106 | 4.1:+39126032 | None:intergenic |
GAAGAAAGATGGTGTTGTTT+TGG | 0.355969 | 4.1:-39125730 | MS.gene08629:CDS |
TTGAGGTTGGTTTCTGGAGT+TGG | 0.363876 | 4.1:+39121448 | None:intergenic |
TCAACTTCTAAAACTGATAG+TGG | 0.367597 | 4.1:-39121429 | MS.gene08629:CDS |
TGAAAGTCCAATCAAGAAAC+AGG | 0.369337 | 4.1:-39124424 | MS.gene08629:intron |
TTGGTTTCTGGAGTTGGAAT+GGG | 0.372031 | 4.1:+39121454 | None:intergenic |
AAATTGATTGTTCTCAATTA+CGG | 0.374650 | 4.1:+39125833 | None:intergenic |
TCGTCGAAGTTATCGGGATC+TGG | 0.374694 | 4.1:+39125984 | None:intergenic |
GGCGATGACGGCGACGAATT+CGG | 0.378681 | 4.1:-39125954 | MS.gene08629:CDS |
AGATGTCAAGCGCCCTGCTT+TGG | 0.378741 | 4.1:-39124680 | MS.gene08629:CDS |
AATAGAATGACTTACACTTT+CGG | 0.379021 | 4.1:+39122261 | None:intergenic |
GGTGACCATTGACAATATTA+AGG | 0.380026 | 4.1:-39122477 | MS.gene08629:intron |
TTCGTCGTCGTCGAAGTTAT+CGG | 0.380816 | 4.1:+39125977 | None:intergenic |
TTCAATGCTACGAAGATGTT+TGG | 0.384407 | 4.1:+39121949 | None:intergenic |
TTGTTCACTTTGCAGTCTGA+TGG | 0.386760 | 4.1:-39121700 | MS.gene08629:intron |
ATTTGTTGTTCCATCCATCT+TGG | 0.386845 | 4.1:+39121913 | None:intergenic |
GATCTTTGTTCACGTGGAAA+TGG | 0.394416 | 4.1:-39122721 | MS.gene08629:CDS |
GCTTGACATCTGGGTCAATA+TGG | 0.397037 | 4.1:+39124692 | None:intergenic |
TTCTTGAGCAAGACCAAAGC+AGG | 0.398443 | 4.1:+39124667 | None:intergenic |
TCGCCGCCGCAGCATACTCC+GGG | 0.404549 | 4.1:+39125760 | None:intergenic |
TTAGTTCTTTGGCCATTGTA+AGG | 0.405227 | 4.1:+39125612 | None:intergenic |
GTGGTTGTGGTGTGTGGTGG+TGG | 0.405411 | 4.1:+39126022 | None:intergenic |
AACATTAGGTTTATGCTCCT+TGG | 0.412196 | 4.1:-39122015 | MS.gene08629:intron |
GTTGGTTTCTGGAGTTGGAA+TGG | 0.417393 | 4.1:+39121453 | None:intergenic |
AACAAGAGAACAAACCAAAA+TGG | 0.417535 | 4.1:+39124626 | None:intergenic |
AATCGGCGTGGTCGTGGTTG+TGG | 0.428373 | 4.1:+39126009 | None:intergenic |
CCACATTAGGAAGCACGGTT+TGG | 0.431631 | 4.1:+39124725 | None:intergenic |
ACACTCCGACGAAGACTTCA+AGG | 0.435509 | 4.1:-39125910 | MS.gene08629:CDS |
TGGAAAAGCTTAGCCACATT+AGG | 0.436797 | 4.1:+39124712 | None:intergenic |
GTCGCCGCCGCAGCATACTC+CGG | 0.438040 | 4.1:+39125759 | None:intergenic |
GAACAACAAATGAGCATCCT+AGG | 0.440720 | 4.1:-39121901 | MS.gene08629:CDS |
TCGTCGTCGTCGAAGTTATC+GGG | 0.440855 | 4.1:+39125978 | None:intergenic |
GAAGAAAAGTGGTGAGGAAG+AGG | 0.444611 | 4.1:+39126138 | None:intergenic |
TGTTCACTTTGCAGTCTGAT+GGG | 0.454001 | 4.1:-39121699 | MS.gene08629:intron |
CTGGGAAATCGGCGTGGTCG+TGG | 0.454375 | 4.1:+39126003 | None:intergenic |
GTCGGAGTGTGGATCGTAAC+CGG | 0.455138 | 4.1:+39125923 | None:intergenic |
TGAAGAAATGAGAAGAAAAG+TGG | 0.464009 | 4.1:+39126127 | None:intergenic |
AGACCAAAATAATCTGCAAC+AGG | 0.464089 | 4.1:+39122678 | None:intergenic |
TGCTTCGGTGGAAAATGAAT+TGG | 0.464467 | 4.1:-39125697 | MS.gene08629:CDS |
GTTATCGGGATCTGGGAAAT+CGG | 0.466583 | 4.1:+39125992 | None:intergenic |
ATCCATCTTGGCTACTACAA+TGG | 0.467493 | 4.1:+39121925 | None:intergenic |
GCTCATGAGTATAATGTTCA+GGG | 0.473981 | 4.1:-39125675 | MS.gene08629:CDS |
ACATGGATTAAGAAGAAGAT+AGG | 0.479008 | 4.1:-39125208 | MS.gene08629:CDS |
GTTGACCAATGGAAGCTTGT+TGG | 0.479177 | 4.1:+39124479 | None:intergenic |
ATAGGATCTGACTTGAGAAA+AGG | 0.480999 | 4.1:+39122286 | None:intergenic |
GACGAATTCGGCGATTTCTC+CGG | 0.483572 | 4.1:-39125942 | MS.gene08629:CDS |
CTTGTTGGATGATACAAAGT+TGG | 0.484049 | 4.1:+39124494 | None:intergenic |
TTTGGCTAAGGTGGATGCTT+CGG | 0.489243 | 4.1:-39125712 | MS.gene08629:CDS |
CTTGTTGTATGTTGGTTCCA+AGG | 0.489358 | 4.1:+39121976 | None:intergenic |
TTTGGTCTTGCTCAAGAAAG+AGG | 0.490488 | 4.1:-39124662 | MS.gene08629:CDS |
GGGTACCTTAATATTGTCAA+TGG | 0.495064 | 4.1:+39122472 | None:intergenic |
GGAGTATGCTGCGGCGGCGA+CGG | 0.495509 | 4.1:-39125757 | MS.gene08629:CDS |
TGTATGTTGGTTCCAAGGCT+TGG | 0.499218 | 4.1:+39121981 | None:intergenic |
TTAACTAGATGGCAGAATGA+TGG | 0.499600 | 4.1:-39122191 | MS.gene08629:intron |
AAGCAGGGCGCTTGACATCT+GGG | 0.500458 | 4.1:+39124683 | None:intergenic |
CCAAACCGTGCTTCCTAATG+TGG | 0.502270 | 4.1:-39124725 | MS.gene08629:CDS |
TGGTGTCTTCTGGTTCTTCG+AGG | 0.502283 | 4.1:+39126042 | None:intergenic |
AGGTTCCTTGAAGTCTTCGT+CGG | 0.505611 | 4.1:+39125905 | None:intergenic |
GTGTGGCCATTGCCAAGCCT+TGG | 0.514241 | 4.1:-39121993 | MS.gene08629:CDS |
TAGGTTTATGCTCCTTGGTG+TGG | 0.518050 | 4.1:-39122010 | MS.gene08629:CDS |
CTGGGTAGAAGAGGAGAGTA+GGG | 0.524712 | 4.1:+39121674 | None:intergenic |
CTTGTAAAAGTGTTGACCAA+TGG | 0.525741 | 4.1:+39124468 | None:intergenic |
ATCATCCAATGTAGTTATGT+TGG | 0.526297 | 4.1:+39125174 | None:intergenic |
GTCAAAGGATGTTCTACTTG+AGG | 0.527701 | 4.1:-39122117 | MS.gene08629:intron |
GCTGGGTAGAAGAGGAGAGT+AGG | 0.528523 | 4.1:+39121673 | None:intergenic |
TTGGCGAGCTTGTTGTATGT+TGG | 0.538009 | 4.1:+39121968 | None:intergenic |
TTAATATTCACTTACAGGGT+CGG | 0.538016 | 4.1:+39121636 | None:intergenic |
ACTCTCCTCTTCTACCCAGC+AGG | 0.538656 | 4.1:-39121670 | MS.gene08629:CDS |
ATCCATTGTAGTAGCCAAGA+TGG | 0.539230 | 4.1:-39121927 | MS.gene08629:CDS |
CGTCGAAGTTATCGGGATCT+GGG | 0.543160 | 4.1:+39125985 | None:intergenic |
TTGAAGTCTTCGTCGGAGTG+TGG | 0.544044 | 4.1:+39125912 | None:intergenic |
ATCATCCAACAAGCTTCCAT+TGG | 0.549386 | 4.1:-39124484 | MS.gene08629:CDS |
AATTGTCTTGGACGAGTCAA+AGG | 0.553370 | 4.1:-39122132 | MS.gene08629:CDS |
ACTTGCATTCACAGGAAATG+AGG | 0.555706 | 4.1:-39122528 | MS.gene08629:CDS |
CTTAGCCACATTAGGAAGCA+CGG | 0.556017 | 4.1:+39124720 | None:intergenic |
GCGACGGAGTTGAAGAAAGA+TGG | 0.557986 | 4.1:-39125741 | MS.gene08629:CDS |
GACGACGACGAAGGCGATGA+CGG | 0.559542 | 4.1:-39125966 | MS.gene08629:CDS |
TTGGTTCCAAGGCTTGGCAA+TGG | 0.565443 | 4.1:+39121987 | None:intergenic |
ATATAGGTACTTGCATTCAC+AGG | 0.570227 | 4.1:-39122536 | MS.gene08629:intron |
GAAATGGATAATGAAGATGT+TGG | 0.572752 | 4.1:-39122705 | MS.gene08629:CDS |
GGCTAAGGTGGATGCTTCGG+TGG | 0.574541 | 4.1:-39125709 | MS.gene08629:CDS |
ATTGTAGTAGCCAAGATGGA+TGG | 0.579282 | 4.1:-39121923 | MS.gene08629:CDS |
GAGTAGCAGCACAGACGTGA+AGG | 0.584656 | 4.1:-39121382 | MS.gene08629:CDS |
AACTTACAACTAAGGAGTCA+AGG | 0.585156 | 4.1:+39125107 | None:intergenic |
GTGGTCGTGGTTGTGGTGTG+TGG | 0.587460 | 4.1:+39126016 | None:intergenic |
TGAGAACAATCAATTTGTGA+TGG | 0.588096 | 4.1:-39125826 | MS.gene08629:CDS |
GCAGCTGATCTTTGTTCACG+TGG | 0.588271 | 4.1:-39122727 | MS.gene08629:intron |
GTCGTGGTTGTGGTGTGTGG+TGG | 0.589418 | 4.1:+39126019 | None:intergenic |
GAATTCTATGCTCCGTGGTG+TGG | 0.592005 | 4.1:-39125801 | MS.gene08629:CDS |
GGATTGATGCATGTTTCTTG+AGG | 0.600573 | 4.1:+39121475 | None:intergenic |
AGCTGCAGCATCAAAACTTG+AGG | 0.603996 | 4.1:-39124764 | MS.gene08629:CDS |
AGCCCCGGAGTATGCTGCGG+CGG | 0.604596 | 4.1:-39125763 | MS.gene08629:CDS |
GGTCTTGCTCAAGAAAGAGG+AGG | 0.609245 | 4.1:-39124659 | MS.gene08629:CDS |
AAATGAGCATCCTAGGGCAA+AGG | 0.610225 | 4.1:-39121894 | MS.gene08629:intron |
AAATGAGAAGAAAAGTGGTG+AGG | 0.611543 | 4.1:+39126132 | None:intergenic |
TAGTGGGAGTTCTGACGTCA+AGG | 0.615430 | 4.1:-39121412 | MS.gene08629:CDS |
CAACTTCTAAAACTGATAGT+GGG | 0.624584 | 4.1:-39121428 | MS.gene08629:CDS |
AACAACAAATGAGCATCCTA+GGG | 0.624661 | 4.1:-39121900 | MS.gene08629:CDS |
AGATGGCCAATTTGTAAAAG+CGG | 0.625080 | 4.1:-39124523 | MS.gene08629:CDS |
TGTGTCCAACATAACTACAT+TGG | 0.631245 | 4.1:-39125179 | MS.gene08629:CDS |
GCATTCACAGGAAATGAGGA+TGG | 0.631256 | 4.1:-39122524 | MS.gene08629:CDS |
GCAGCATCAAAACTTGAGGA+TGG | 0.631596 | 4.1:-39124760 | MS.gene08629:CDS |
GTAGTTATGTTGGACACACC+AGG | 0.632270 | 4.1:+39125184 | None:intergenic |
TATGCAGATTACTGTTGATG+TGG | 0.645760 | 4.1:-39121526 | MS.gene08629:intron |
TCATTGTCAAGCTTTAGCCC+CGG | 0.645924 | 4.1:-39125778 | MS.gene08629:CDS |
GCTTGGCAATGGCCACACCA+AGG | 0.650720 | 4.1:+39121998 | None:intergenic |
AGATTACTGTTGATGTGGAT+CGG | 0.657156 | 4.1:-39121521 | MS.gene08629:CDS |
GATAACTTCGACGACGACGA+AGG | 0.658296 | 4.1:-39125975 | MS.gene08629:CDS |
GGAGTTCATAAGCCTTACAA+TGG | 0.662775 | 4.1:-39125624 | MS.gene08629:CDS |
TCTTGAGCAAGACCAAAGCA+GGG | 0.663604 | 4.1:+39124668 | None:intergenic |
TTTAGCCCCGGAGTATGCTG+CGG | 0.663999 | 4.1:-39125766 | MS.gene08629:CDS |
ATTAAGAAGAAGATAGGACC+TGG | 0.664133 | 4.1:-39125202 | MS.gene08629:CDS |
TGATGTGGATCGGACAGTGG+TGG | 0.664541 | 4.1:-39121511 | MS.gene08629:CDS |
GTAGAGATGCTATAGTGACA+TGG | 0.675835 | 4.1:-39125225 | MS.gene08629:intron |
CGGGATCTGGGAAATCGGCG+TGG | 0.689839 | 4.1:+39125997 | None:intergenic |
TGTTGATGTGGATCGGACAG+TGG | 0.690513 | 4.1:-39121514 | MS.gene08629:CDS |
CGCCGCCGCAGCATACTCCG+GGG | 0.693168 | 4.1:+39125761 | None:intergenic |
GCTTGACAATGACCACACCA+CGG | 0.725768 | 4.1:+39125789 | None:intergenic |
TGGTTGAATTCTATGCTCCG+TGG | 0.756649 | 4.1:-39125806 | MS.gene08629:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTTTTTTTTTTTTAAT+GGG | + | chr4.1:39124646-39124665 | None:intergenic | 0.0% |
!! | AGTATTGTTAAAAAAAAAAA+AGG | + | chr4.1:39124733-39124752 | None:intergenic | 10.0% |
!! | CTTAATATTAAATTAAAAAG+TGG | + | chr4.1:39123861-39123880 | None:intergenic | 10.0% |
!! | TAATTAATTGTTATAACATT+AGG | - | chr4.1:39125509-39125528 | MS.gene08629:intron | 10.0% |
!!! | ATATAATGGATTAATTAAAA+AGG | + | chr4.1:39122604-39122623 | None:intergenic | 10.0% |
!!! | TATTAGCTTTAATATTTATA+GGG | - | chr4.1:39124031-39124050 | MS.gene08629:intron | 10.0% |
!!! | TTATTAGCTTTAATATTTAT+AGG | - | chr4.1:39124030-39124049 | MS.gene08629:intron | 10.0% |
!! | AAAAAAAAAAAAAAACTCCT+AGG | - | chr4.1:39124651-39124670 | MS.gene08629:CDS | 15.0% |
!! | TAAATGTAACTATATTTGTT+TGG | - | chr4.1:39122084-39122103 | MS.gene08629:intron | 15.0% |
!!! | ATTTAAATGCCTATTTTTTA+TGG | - | chr4.1:39122522-39122541 | MS.gene08629:CDS | 15.0% |
!! | AAAAAAAAAAAAGGATCCTT+TGG | + | chr4.1:39124724-39124743 | None:intergenic | 20.0% |
!! | AAAAAAAAAAAGGATCCTTT+GGG | + | chr4.1:39124723-39124742 | None:intergenic | 20.0% |
!! | AAAAATCCAAAACTTAACAT+GGG | + | chr4.1:39125750-39125769 | None:intergenic | 20.0% |
!! | AAAGATGAAACTTTGAATAT+AGG | - | chr4.1:39124986-39125005 | MS.gene08629:intron | 20.0% |
!! | AAATTGATTGTTCTCAATTA+CGG | + | chr4.1:39121708-39121727 | None:intergenic | 20.0% |
!! | AAATTGCATTTGATAAAAGA+TGG | + | chr4.1:39122473-39122492 | None:intergenic | 20.0% |
!! | AATTGCATTTGATAAAAGAT+GGG | + | chr4.1:39122472-39122491 | None:intergenic | 20.0% |
!! | ACAAAAAAATGCAAATAAAG+TGG | - | chr4.1:39123419-39123438 | MS.gene08629:intron | 20.0% |
!! | ACAAGTATTTATATACATGA+GGG | + | chr4.1:39124129-39124148 | None:intergenic | 20.0% |
!! | ATTCTGATGATTTACAAATA+AGG | + | chr4.1:39124533-39124552 | None:intergenic | 20.0% |
!! | CAAATCTATATAATTTAAGC+TGG | + | chr4.1:39124222-39124241 | None:intergenic | 20.0% |
!! | GAAAAGGAAATTATTACTTT+GGG | + | chr4.1:39124899-39124918 | None:intergenic | 20.0% |
!! | TACAAGTATTTATATACATG+AGG | + | chr4.1:39124130-39124149 | None:intergenic | 20.0% |
!! | TATAGTGATAAAAAGATACA+CGG | - | chr4.1:39122570-39122589 | MS.gene08629:intron | 20.0% |
!! | TTAAAGCTAATAATAGAAAG+AGG | + | chr4.1:39124023-39124042 | None:intergenic | 20.0% |
!! | TTGTACAATCCATAAAAAAT+AGG | + | chr4.1:39122534-39122553 | None:intergenic | 20.0% |
!! | TTGTTTAATATTCACTTACA+GGG | + | chr4.1:39125909-39125928 | None:intergenic | 20.0% |
!! | TTTCCTGTTTATTATAATTC+TGG | - | chr4.1:39123447-39123466 | MS.gene08629:intron | 20.0% |
!!! | AAGTCTTTATGTTTTTATTC+AGG | - | chr4.1:39125194-39125213 | MS.gene08629:CDS | 20.0% |
!!! | ATTTTTTATGGATTGTACAA+AGG | - | chr4.1:39122534-39122553 | MS.gene08629:intron | 20.0% |
!!! | TAACACATTTTTTAACTAGA+TGG | - | chr4.1:39125336-39125355 | MS.gene08629:intron | 20.0% |
!!! | TAATTTTGATGAAATTGTCT+TGG | - | chr4.1:39125394-39125413 | MS.gene08629:intron | 20.0% |
!!! | TCATTTTCTCAAATTATTAC+CGG | + | chr4.1:39122057-39122076 | None:intergenic | 20.0% |
!!! | TCGTTTTATATTGTTAATCT+AGG | - | chr4.1:39123156-39123175 | MS.gene08629:intron | 20.0% |
!!! | TCTTTTATCAAATGCAATTT+AGG | - | chr4.1:39122473-39122492 | MS.gene08629:intron | 20.0% |
!!! | TTAAATTTTAAATCATGCCT+AGG | + | chr4.1:39124671-39124690 | None:intergenic | 20.0% |
!!! | TTCATTTTTTTATCATGCTA+TGG | - | chr4.1:39125115-39125134 | MS.gene08629:CDS | 20.0% |
! | AAAAAAAAAAGGATCCTTTG+GGG | + | chr4.1:39124722-39124741 | None:intergenic | 25.0% |
! | AAGAAAATAGAACTTGAAAC+TGG | + | chr4.1:39125462-39125481 | None:intergenic | 25.0% |
! | AATAGAATGACTTACACTTT+CGG | + | chr4.1:39125280-39125299 | None:intergenic | 25.0% |
! | AATAGCGAAAAAACATCAAT+TGG | - | chr4.1:39122955-39122974 | MS.gene08629:intron | 25.0% |
! | AATCCAAAAACTTACAACTA+AGG | + | chr4.1:39122442-39122461 | None:intergenic | 25.0% |
! | ATTGGACTTTCAAAAATTAC+TGG | + | chr4.1:39123106-39123125 | None:intergenic | 25.0% |
! | ATTGTAATTAAAGTGACCTT+GGG | - | chr4.1:39125718-39125737 | MS.gene08629:CDS | 25.0% |
! | CAAGTATTTATATACATGAG+GGG | + | chr4.1:39124128-39124147 | None:intergenic | 25.0% |
! | CATACAAATTAGATCATCTA+CGG | + | chr4.1:39125980-39125999 | None:intergenic | 25.0% |
! | CTTAAAATGAATGCACTATT+TGG | - | chr4.1:39123916-39123935 | MS.gene08629:intron | 25.0% |
! | GAAAAATCCAAAACTTAACA+TGG | + | chr4.1:39125751-39125770 | None:intergenic | 25.0% |
! | GGAAAAGGAAATTATTACTT+TGG | + | chr4.1:39124900-39124919 | None:intergenic | 25.0% |
! | GTATTAAACAATGGCTTATA+AGG | + | chr4.1:39123340-39123359 | None:intergenic | 25.0% |
! | GTTGTTTAATATTCACTTAC+AGG | + | chr4.1:39125910-39125929 | None:intergenic | 25.0% |
! | TAAAAAAATGAAGAGAGACT+CGG | + | chr4.1:39125107-39125126 | None:intergenic | 25.0% |
! | TTAAAACACAACAATGTTAG+AGG | + | chr4.1:39123216-39123235 | None:intergenic | 25.0% |
! | TTAGGAATAACACAAAAAAG+TGG | - | chr4.1:39124328-39124347 | MS.gene08629:intron | 25.0% |
! | TTATTAAGATCACATGTTGA+AGG | + | chr4.1:39123192-39123211 | None:intergenic | 25.0% |
! | TTGGACTTTCAAAAATTACT+GGG | + | chr4.1:39123105-39123124 | None:intergenic | 25.0% |
!! | AAGAAATGTACTTAGTTCTT+TGG | + | chr4.1:39121940-39121959 | None:intergenic | 25.0% |
!! | AAGGTCACTTTAATTACAAT+GGG | + | chr4.1:39125718-39125737 | None:intergenic | 25.0% |
!! | AATTTTACCAAAATTTCCCT+TGG | - | chr4.1:39124475-39124494 | MS.gene08629:CDS | 25.0% |
!! | ATTTTCTCAAATTATTACCG+GGG | + | chr4.1:39122055-39122074 | None:intergenic | 25.0% |
!! | CATTTTCTCAAATTATTACC+GGG | + | chr4.1:39122056-39122075 | None:intergenic | 25.0% |
!! | CCATTTTCTCAAATTATTAC+CGG | + | chr4.1:39122145-39122164 | None:intergenic | 25.0% |
!! | TACCAAAATCTAGTTTATAC+CGG | + | chr4.1:39125676-39125695 | None:intergenic | 25.0% |
!! | TAGATGATCTAATTTGTATG+TGG | - | chr4.1:39125980-39125999 | MS.gene08629:CDS | 25.0% |
!! | TTATTAGATTTTATGTCCTG+AGG | - | chr4.1:39123793-39123812 | MS.gene08629:intron | 25.0% |
!!! | AAGATTTTAACTTACTCCAT+TGG | + | chr4.1:39123731-39123750 | None:intergenic | 25.0% |
!!! | ACATTGTTGTGTTTTAAACT+TGG | - | chr4.1:39123219-39123238 | MS.gene08629:intron | 25.0% |
!!! | AGTTTTGCTTTTTAAATGGT+GGG | - | chr4.1:39122246-39122265 | MS.gene08629:intron | 25.0% |
!!! | ATGTTTTTATTCAGGCATTT+GGG | - | chr4.1:39125202-39125221 | MS.gene08629:CDS | 25.0% |
!!! | GCATTTTTTTGTGAAACAAA+AGG | + | chr4.1:39123411-39123430 | None:intergenic | 25.0% |
!!! | TAGACAAATTTTAGTTTGCA+AGG | - | chr4.1:39123520-39123539 | MS.gene08629:intron | 25.0% |
!!! | TATGTTTTTATTCAGGCATT+TGG | - | chr4.1:39125201-39125220 | MS.gene08629:CDS | 25.0% |
!!! | TCAGAGTTTTGCTTTTTAAA+TGG | - | chr4.1:39122242-39122261 | MS.gene08629:intron | 25.0% |
!!! | TCTGAAACTAAAGTTGTTTT+GGG | - | chr4.1:39122405-39122424 | MS.gene08629:intron | 25.0% |
!!! | TTCTACTTGAGGTTTAATTT+TGG | - | chr4.1:39125432-39125451 | MS.gene08629:intron | 25.0% |
!!! | TTCTGAAACTAAAGTTGTTT+TGG | - | chr4.1:39122404-39122423 | MS.gene08629:intron | 25.0% |
AAAATAGAACTTGAAACTGG+TGG | + | chr4.1:39125459-39125478 | None:intergenic | 30.0% | |
AAACGCAAAAGATCAAAACT+TGG | + | chr4.1:39121972-39121991 | None:intergenic | 30.0% | |
AAAGTTAGGTTATGTAGAAC+CGG | + | chr4.1:39125955-39125974 | None:intergenic | 30.0% | |
AAATAGAACTTGAAACTGGT+GGG | + | chr4.1:39125458-39125477 | None:intergenic | 30.0% | |
AACAAGAGAACAAACCAAAA+TGG | + | chr4.1:39122915-39122934 | None:intergenic | 30.0% | |
AATCTTGTGTTTGTAATCAC+TGG | - | chr4.1:39123745-39123764 | MS.gene08629:intron | 30.0% | |
AGTGGATCATGATAATAGAA+TGG | - | chr4.1:39123485-39123504 | MS.gene08629:intron | 30.0% | |
AGTTTGGCAAACACTATAAT+AGG | + | chr4.1:39123589-39123608 | None:intergenic | 30.0% | |
ATAGAATGACTTACACTTTC+GGG | + | chr4.1:39125279-39125298 | None:intergenic | 30.0% | |
ATCATCCAATGTAGTTATGT+TGG | + | chr4.1:39122367-39122386 | None:intergenic | 30.0% | |
ATCTTGTGTTTGTAATCACT+GGG | - | chr4.1:39123746-39123765 | MS.gene08629:intron | 30.0% | |
CACATTATGACAGAAAAAGA+AGG | + | chr4.1:39122731-39122750 | None:intergenic | 30.0% | |
CAGTAGAAATATGTCATTGT+CGG | + | chr4.1:39124777-39124796 | None:intergenic | 30.0% | |
CATTGTAATTAAAGTGACCT+TGG | - | chr4.1:39125717-39125736 | MS.gene08629:CDS | 30.0% | |
CCGGTAATAATTTGAGAAAA+TGG | - | chr4.1:39122054-39122073 | MS.gene08629:intron | 30.0% | |
GAAATGGATAATGAAGATGT+TGG | - | chr4.1:39124833-39124852 | MS.gene08629:intron | 30.0% | |
GGCATTTAAATCACAAAAAG+TGG | + | chr4.1:39122513-39122532 | None:intergenic | 30.0% | |
GTGGATCATGATAATAGAAT+GGG | - | chr4.1:39123486-39123505 | MS.gene08629:intron | 30.0% | |
TAACAAAGAGACAGAAAAAC+AGG | + | chr4.1:39123887-39123906 | None:intergenic | 30.0% | |
TATAATTTATGACGCCGATA+TGG | - | chr4.1:39122021-39122040 | MS.gene08629:intron | 30.0% | |
TCATACTATGTAGTTATCTG+TGG | - | chr4.1:39124299-39124318 | MS.gene08629:intron | 30.0% | |
TCGATGAAAAAGTAAACAGT+AGG | + | chr4.1:39121893-39121912 | None:intergenic | 30.0% | |
TCGGAAAATCAAGATTCTTT+GGG | + | chr4.1:39124758-39124777 | None:intergenic | 30.0% | |
TGAAGAAATGAGAAGAAAAG+TGG | + | chr4.1:39121414-39121433 | None:intergenic | 30.0% | |
TGAGAACAATCAATTTGTGA+TGG | - | chr4.1:39121712-39121731 | MS.gene08629:intron | 30.0% | |
TGGACTTTCAAAAATTACTG+GGG | + | chr4.1:39123104-39123123 | None:intergenic | 30.0% | |
TGTGTTAGAGATGCAAAAAA+TGG | + | chr4.1:39125323-39125342 | None:intergenic | 30.0% | |
TTAATATTCACTTACAGGGT+CGG | + | chr4.1:39125905-39125924 | None:intergenic | 30.0% | |
! | AAAATTTTTGCTTGATGGAG+AGG | - | chr4.1:39125040-39125059 | MS.gene08629:intron | 30.0% |
! | AAGCTGGTTTCAAATAATGT+TGG | + | chr4.1:39124206-39124225 | None:intergenic | 30.0% |
! | AATTTCCTTTTCCTTTTGTG+TGG | - | chr4.1:39124907-39124926 | MS.gene08629:intron | 30.0% |
! | AATTTGCTTTGAATCTGAGT+AGG | - | chr4.1:39124430-39124449 | MS.gene08629:CDS | 30.0% |
! | ACATGGATTAAGAAGAAGAT+AGG | - | chr4.1:39122330-39122349 | MS.gene08629:intron | 30.0% |
! | ACCAAAATCTAGTTTATACC+GGG | + | chr4.1:39125675-39125694 | None:intergenic | 30.0% |
! | ACTCCTTAGTTGTAAGTTTT+TGG | - | chr4.1:39122436-39122455 | MS.gene08629:intron | 30.0% |
! | ATGGTAGTGATTGAATGTAA+CGG | - | chr4.1:39122161-39122180 | MS.gene08629:CDS | 30.0% |
! | ATTGGTCAACACTTTTACAA+GGG | - | chr4.1:39123072-39123091 | MS.gene08629:intron | 30.0% |
! | CAAGGTCACTTTAATTACAA+TGG | + | chr4.1:39125719-39125738 | None:intergenic | 30.0% |
! | TCAAGTTCTATTTTCTTGTG+TGG | - | chr4.1:39125465-39125484 | MS.gene08629:intron | 30.0% |
! | TTTTTAATGGGATGATGCAT+AGG | + | chr4.1:39124634-39124653 | None:intergenic | 30.0% |
! | TTTTTCTGTCATAATGTGCA+GGG | - | chr4.1:39122733-39122752 | MS.gene08629:intron | 30.0% |
!! | CAACTTCTAAAACTGATAGT+GGG | - | chr4.1:39126110-39126129 | MS.gene08629:CDS | 30.0% |
!! | CTATTTCCGCTTTTACAAAT+TGG | + | chr4.1:39123024-39123043 | None:intergenic | 30.0% |
!! | TCAACTTCTAAAACTGATAG+TGG | - | chr4.1:39126109-39126128 | MS.gene08629:CDS | 30.0% |
!! | TGTTTTTATTCAGGCATTTG+GGG | - | chr4.1:39125203-39125222 | MS.gene08629:CDS | 30.0% |
!!! | ACTATCAGTTTTAGAAGTTG+AGG | + | chr4.1:39126110-39126129 | None:intergenic | 30.0% |
!!! | ACTGTTTACTTTTTCATCGA+TGG | - | chr4.1:39121893-39121912 | MS.gene08629:intron | 30.0% |
!!! | GAGTTTTGCTTTTTAAATGG+TGG | - | chr4.1:39122245-39122264 | MS.gene08629:intron | 30.0% |
!!! | GTTTTGCTTTTTAAATGGTG+GGG | - | chr4.1:39122247-39122266 | MS.gene08629:intron | 30.0% |
!!! | TTGATGTTTTTTCGCTATTC+TGG | + | chr4.1:39122954-39122973 | None:intergenic | 30.0% |
AAATGAGAAGAAAAGTGGTG+AGG | + | chr4.1:39121409-39121428 | None:intergenic | 35.0% | |
AACAACAAATGAGCATCCTA+GGG | - | chr4.1:39125638-39125657 | MS.gene08629:CDS | 35.0% | |
AACACAAAAAAGTGGCATCA+TGG | - | chr4.1:39124336-39124355 | MS.gene08629:intron | 35.0% | |
AACATTAGGTTTATGCTCCT+TGG | - | chr4.1:39125523-39125542 | MS.gene08629:intron | 35.0% | |
AACTTACAACTAAGGAGTCA+AGG | + | chr4.1:39122434-39122453 | None:intergenic | 35.0% | |
AAGTTAGGTTATGTAGAACC+GGG | + | chr4.1:39125954-39125973 | None:intergenic | 35.0% | |
AATATCCAAAGATTCAGCAC+AGG | + | chr4.1:39124572-39124591 | None:intergenic | 35.0% | |
ACAAGTTCTCCATTATATCC+CGG | - | chr4.1:39125933-39125952 | MS.gene08629:CDS | 35.0% | |
ACTGCAAAGTGAACAAAACT+TGG | + | chr4.1:39125834-39125853 | None:intergenic | 35.0% | |
AGACCAAAATAATCTGCAAC+AGG | + | chr4.1:39124863-39124882 | None:intergenic | 35.0% | |
AGATGGCCAATTTGTAAAAG+CGG | - | chr4.1:39123015-39123034 | MS.gene08629:intron | 35.0% | |
AGATTACTGTTGATGTGGAT+CGG | - | chr4.1:39126017-39126036 | MS.gene08629:CDS | 35.0% | |
AGCCATTGTTTAATACTCTC+TGG | - | chr4.1:39123344-39123363 | MS.gene08629:intron | 35.0% | |
AGTTATCTGTGGAGATGTTT+AGG | - | chr4.1:39124310-39124329 | MS.gene08629:intron | 35.0% | |
ATATAGGTACTTGCATTCAC+AGG | - | chr4.1:39125002-39125021 | MS.gene08629:intron | 35.0% | |
ATCCAAAACTTAACATGGGT+TGG | + | chr4.1:39125746-39125765 | None:intergenic | 35.0% | |
ATTAAGAAGAAGATAGGACC+TGG | - | chr4.1:39122336-39122355 | MS.gene08629:intron | 35.0% | |
CAAAATTGCAACTCATAAGC+CGG | + | chr4.1:39122287-39122306 | None:intergenic | 35.0% | |
CCAATCAAGAAACAGGTAAT+TGG | - | chr4.1:39123121-39123140 | MS.gene08629:intron | 35.0% | |
CGGAAAATCAAGATTCTTTG+GGG | + | chr4.1:39124757-39124776 | None:intergenic | 35.0% | |
CTTGTTGGATGATACAAAGT+TGG | + | chr4.1:39123047-39123066 | None:intergenic | 35.0% | |
GATCATCTACGGATAAAGTT+AGG | + | chr4.1:39125969-39125988 | None:intergenic | 35.0% | |
GCGCCAGAATTATAATAAAC+AGG | + | chr4.1:39123453-39123472 | None:intergenic | 35.0% | |
GCTCATGAGTATAATGTTCA+GGG | - | chr4.1:39121863-39121882 | MS.gene08629:intron | 35.0% | |
GCTTTAGCAAAAAGAGATTG+TGG | - | chr4.1:39125160-39125179 | MS.gene08629:CDS | 35.0% | |
GGCAAATGGTCTCTATATAA+TGG | + | chr4.1:39122618-39122637 | None:intergenic | 35.0% | |
GGGTACCTTAATATTGTCAA+TGG | + | chr4.1:39125069-39125088 | None:intergenic | 35.0% | |
GGTGACCATTGACAATATTA+AGG | - | chr4.1:39125061-39125080 | MS.gene08629:intron | 35.0% | |
GTCGGAAAATCAAGATTCTT+TGG | + | chr4.1:39124759-39124778 | None:intergenic | 35.0% | |
TAAAGACTCATCCACACAAA+AGG | + | chr4.1:39124921-39124940 | None:intergenic | 35.0% | |
TAGTGTTTGCCAAACTAGTA+TGG | - | chr4.1:39123593-39123612 | MS.gene08629:intron | 35.0% | |
TATGCAGATTACTGTTGATG+TGG | - | chr4.1:39126012-39126031 | MS.gene08629:CDS | 35.0% | |
TATGTAGAACCGGGATATAA+TGG | + | chr4.1:39125945-39125964 | None:intergenic | 35.0% | |
TCCAAAACTTAACATGGGTT+GGG | + | chr4.1:39125745-39125764 | None:intergenic | 35.0% | |
TGAAAGTCCAATCAAGAAAC+AGG | - | chr4.1:39123114-39123133 | MS.gene08629:intron | 35.0% | |
TGGACATATCCATACTAGTT+TGG | + | chr4.1:39123605-39123624 | None:intergenic | 35.0% | |
TGTGTCCAACATAACTACAT+TGG | - | chr4.1:39122359-39122378 | MS.gene08629:intron | 35.0% | |
TTAACTAGATGGCAGAATGA+TGG | - | chr4.1:39125347-39125366 | MS.gene08629:intron | 35.0% | |
TTAACTTACTCCATTGGATC+TGG | + | chr4.1:39123725-39123744 | None:intergenic | 35.0% | |
TTCAATGCTACGAAGATGTT+TGG | + | chr4.1:39125592-39125611 | None:intergenic | 35.0% | |
! | AAGCCTGTTGCAGATTATTT+TGG | - | chr4.1:39124857-39124876 | MS.gene08629:intron | 35.0% |
! | ACCCGGTATAAACTAGATTT+TGG | - | chr4.1:39125671-39125690 | MS.gene08629:CDS | 35.0% |
! | AGAAGCAGCAAAGATTTTCA+AGG | - | chr4.1:39123302-39123321 | MS.gene08629:intron | 35.0% |
! | ATAGGATCTGACTTGAGAAA+AGG | + | chr4.1:39125255-39125274 | None:intergenic | 35.0% |
! | CATTGGTCAACACTTTTACA+AGG | - | chr4.1:39123071-39123090 | MS.gene08629:intron | 35.0% |
! | CCAATTACCTGTTTCTTGAT+TGG | + | chr4.1:39123124-39123143 | None:intergenic | 35.0% |
! | CTTTTTCTGTCATAATGTGC+AGG | - | chr4.1:39122732-39122751 | MS.gene08629:intron | 35.0% |
! | GAAGCAGCAAAGATTTTCAA+GGG | - | chr4.1:39123303-39123322 | MS.gene08629:intron | 35.0% |
! | GATTCAGTCTATGAAAGTGT+TGG | - | chr4.1:39122686-39122705 | MS.gene08629:CDS | 35.0% |
! | GCAGTTTCAATTTGAAGTGA+CGG | - | chr4.1:39122204-39122223 | MS.gene08629:intron | 35.0% |
! | GGCAGAAAATTTTTGCTTGA+TGG | - | chr4.1:39125035-39125054 | MS.gene08629:intron | 35.0% |
! | TTAGTTCTTTGGCCATTGTA+AGG | + | chr4.1:39121929-39121948 | None:intergenic | 35.0% |
!! | AAGCAGCAAAGATTTTCAAG+GGG | - | chr4.1:39123304-39123323 | MS.gene08629:intron | 35.0% |
!! | ATTTGTTGTTCCATCCATCT+TGG | + | chr4.1:39125628-39125647 | None:intergenic | 35.0% |
!! | CTTGTAAAAGTGTTGACCAA+TGG | + | chr4.1:39123073-39123092 | None:intergenic | 35.0% |
!! | TATATTTGTTTGGTGTTGCC+TGG | - | chr4.1:39122094-39122113 | MS.gene08629:intron | 35.0% |
!! | TGCCAGAGAGTATTAAACAA+TGG | + | chr4.1:39123349-39123368 | None:intergenic | 35.0% |
!!! | AAGGTTTTAGCTTGTCTACA+AGG | + | chr4.1:39125236-39125255 | None:intergenic | 35.0% |
!!! | GAAGAAAGATGGTGTTGTTT+TGG | - | chr4.1:39121808-39121827 | MS.gene08629:intron | 35.0% |
!!! | GATGTCGTTTTGGGTTTTTT+CGG | + | chr4.1:39121453-39121472 | None:intergenic | 35.0% |
!!! | GCAGATTATTTTGGTCTTTC+TGG | - | chr4.1:39124866-39124885 | MS.gene08629:intron | 35.0% |
!!! | TCAGTTTTAGAAGTTGAGGT+TGG | + | chr4.1:39126106-39126125 | None:intergenic | 35.0% |
!!! | TTTTTTCGCTATTCTGGAGA+GGG | + | chr4.1:39122948-39122967 | None:intergenic | 35.0% |
AAAAAAGTGGCATCATGGTG+TGG | - | chr4.1:39124341-39124360 | MS.gene08629:intron | 40.0% | |
AATTGCCTGTGCTGAATCTT+TGG | - | chr4.1:39124564-39124583 | MS.gene08629:intron | 40.0% | |
AATTGTCTTGGACGAGTCAA+AGG | - | chr4.1:39125406-39125425 | MS.gene08629:intron | 40.0% | |
ACTAGTATGGATATGTCCAG+CGG | - | chr4.1:39123606-39123625 | MS.gene08629:intron | 40.0% | |
ACTTGCATTCACAGGAAATG+AGG | - | chr4.1:39125010-39125029 | MS.gene08629:intron | 40.0% | |
AGATGCAAAAAATGGCAAGC+AGG | + | chr4.1:39125315-39125334 | None:intergenic | 40.0% | |
ATCATCCAACAAGCTTCCAT+TGG | - | chr4.1:39123054-39123073 | MS.gene08629:intron | 40.0% | |
ATCCATCTTGGCTACTACAA+TGG | + | chr4.1:39125616-39125635 | None:intergenic | 40.0% | |
ATCCATTGTAGTAGCCAAGA+TGG | - | chr4.1:39125611-39125630 | MS.gene08629:intron | 40.0% | |
ATTGTAGTAGCCAAGATGGA+TGG | - | chr4.1:39125615-39125634 | MS.gene08629:CDS | 40.0% | |
CCACAGTTAAGGATCATGAT+AGG | - | chr4.1:39124069-39124088 | MS.gene08629:intron | 40.0% | |
CCTATCATGATCCTTAACTG+TGG | + | chr4.1:39124072-39124091 | None:intergenic | 40.0% | |
CTCATCCACACAAAAGGAAA+AGG | + | chr4.1:39124915-39124934 | None:intergenic | 40.0% | |
GAAACACACTACACTGATAC+CGG | - | chr4.1:39122123-39122142 | MS.gene08629:CDS | 40.0% | |
GAACAACAAATGAGCATCCT+AGG | - | chr4.1:39125637-39125656 | MS.gene08629:CDS | 40.0% | |
GATCTTTGTTCACGTGGAAA+TGG | - | chr4.1:39124817-39124836 | MS.gene08629:intron | 40.0% | |
GGAGTTCATAAGCCTTACAA+TGG | - | chr4.1:39121914-39121933 | MS.gene08629:CDS | 40.0% | |
GGATTGATGCATGTTTCTTG+AGG | + | chr4.1:39126066-39126085 | None:intergenic | 40.0% | |
GGCTCATGAGTATAATGTTC+AGG | - | chr4.1:39121862-39121881 | MS.gene08629:intron | 40.0% | |
GTAGAGATGCTATAGTGACA+TGG | - | chr4.1:39122313-39122332 | MS.gene08629:CDS | 40.0% | |
GTATCAGTGTAGTGTGTTTC+CGG | + | chr4.1:39122123-39122142 | None:intergenic | 40.0% | |
GTCAAAGGATGTTCTACTTG+AGG | - | chr4.1:39125421-39125440 | MS.gene08629:intron | 40.0% | |
GTGATTGAATGTAACGGTGT+CGG | - | chr4.1:39122167-39122186 | MS.gene08629:CDS | 40.0% | |
TATTTCATCGTCTCTGCAGA+TGG | - | chr4.1:39122998-39123017 | MS.gene08629:intron | 40.0% | |
TGAACAAAGATCAGCTGCAA+GGG | + | chr4.1:39124809-39124828 | None:intergenic | 40.0% | |
TGACTTACACTTTCGGGAAT+AGG | + | chr4.1:39125273-39125292 | None:intergenic | 40.0% | |
TGCTTCGGTGGAAAATGAAT+TGG | - | chr4.1:39121841-39121860 | MS.gene08629:intron | 40.0% | |
TGGAAAAGCTTAGCCACATT+AGG | + | chr4.1:39122829-39122848 | None:intergenic | 40.0% | |
TGTTCACTTTGCAGTCTGAT+GGG | - | chr4.1:39125839-39125858 | MS.gene08629:CDS | 40.0% | |
TTATGTCCTGAGGAGTTCAT+CGG | - | chr4.1:39123803-39123822 | MS.gene08629:intron | 40.0% | |
TTGTTCACTTTGCAGTCTGA+TGG | - | chr4.1:39125838-39125857 | MS.gene08629:CDS | 40.0% | |
TTGTTGCTAATCGTAGAGTG+AGG | + | chr4.1:39124507-39124526 | None:intergenic | 40.0% | |
! | GAGGAGAAACTGAACCATTT+TGG | - | chr4.1:39122898-39122917 | MS.gene08629:intron | 40.0% |
! | GTGTACACCAAGGGAAATTT+TGG | + | chr4.1:39124485-39124504 | None:intergenic | 40.0% |
! | GTTTTCGTAACCAGATCCAA+TGG | - | chr4.1:39123712-39123731 | MS.gene08629:intron | 40.0% |
! | TCCCAACCCATGTTAAGTTT+TGG | - | chr4.1:39125741-39125760 | MS.gene08629:CDS | 40.0% |
! | TCGATTTGACTCCACAGTTA+AGG | - | chr4.1:39124058-39124077 | MS.gene08629:intron | 40.0% |
!! | AGCAAAGATTTTCAAGGGGA+AGG | - | chr4.1:39123308-39123327 | MS.gene08629:intron | 40.0% |
!! | CTTGTTGTATGTTGGTTCCA+AGG | + | chr4.1:39125565-39125584 | None:intergenic | 40.0% |
!! | TAGAAGTTGAGGTTGGTTTC+TGG | + | chr4.1:39126099-39126118 | None:intergenic | 40.0% |
!! | TTGGTTTCTGGAGTTGGAAT+GGG | + | chr4.1:39126087-39126106 | None:intergenic | 40.0% |
!! | TTTGGTCTTGCTCAAGAAAG+AGG | - | chr4.1:39122876-39122895 | MS.gene08629:intron | 40.0% |
!!! | ACATCTTTTTCGTCGACTTC+AGG | + | chr4.1:39121656-39121675 | None:intergenic | 40.0% |
!!! | AGATGGTGTTGTTTTGGCTA+AGG | - | chr4.1:39121814-39121833 | MS.gene08629:intron | 40.0% |
!!! | GTTTTTTCGCTATTCTGGAG+AGG | + | chr4.1:39122949-39122968 | None:intergenic | 40.0% |
!!! | TGGGGCGTTAATTTTGAAAC+CGG | - | chr4.1:39122265-39122284 | MS.gene08629:intron | 40.0% |
AAATGAGCATCCTAGGGCAA+AGG | - | chr4.1:39125644-39125663 | MS.gene08629:CDS | 45.0% | |
ACTCGGCAGAAACAGAGAAA+AGG | + | chr4.1:39125090-39125109 | None:intergenic | 45.0% | |
AGCTGCAGCATCAAAACTTG+AGG | - | chr4.1:39122774-39122793 | MS.gene08629:intron | 45.0% | |
AGGTTCCTTGAAGTCTTCGT+CGG | + | chr4.1:39121636-39121655 | None:intergenic | 45.0% | |
ATAGAGACCATTTGCCGTGT+TGG | - | chr4.1:39122622-39122641 | MS.gene08629:intron | 45.0% | |
ATCAACACCAACACGGCAAA+TGG | + | chr4.1:39122632-39122651 | None:intergenic | 45.0% | |
CATGGTGTGGTTTGATTGGA+TGG | - | chr4.1:39124354-39124373 | MS.gene08629:intron | 45.0% | |
CATTACATCAGAAGCCACTG+TGG | - | chr4.1:39125778-39125797 | MS.gene08629:CDS | 45.0% | |
CCAGAGAATCAACACCAACA+CGG | + | chr4.1:39122639-39122658 | None:intergenic | 45.0% | |
CTCGGCAGAAACAGAGAAAA+GGG | + | chr4.1:39125089-39125108 | None:intergenic | 45.0% | |
CTTAGCCACATTAGGAAGCA+CGG | + | chr4.1:39122821-39122840 | None:intergenic | 45.0% | |
GAAGAAAAGTGGTGAGGAAG+AGG | + | chr4.1:39121403-39121422 | None:intergenic | 45.0% | |
GCAGCATCAAAACTTGAGGA+TGG | - | chr4.1:39122778-39122797 | MS.gene08629:intron | 45.0% | |
GCATCATGGTGTGGTTTGAT+TGG | - | chr4.1:39124350-39124369 | MS.gene08629:intron | 45.0% | |
GCATTCACAGGAAATGAGGA+TGG | - | chr4.1:39125014-39125033 | MS.gene08629:intron | 45.0% | |
GCTTGACATCTGGGTCAATA+TGG | + | chr4.1:39122849-39122868 | None:intergenic | 45.0% | |
GGAAAACGACGAGTCGTTTA+TGG | + | chr4.1:39121382-39121401 | None:intergenic | 45.0% | |
GTAGTTATGTTGGACACACC+AGG | + | chr4.1:39122357-39122376 | None:intergenic | 45.0% | |
GTGAACAAAGATCAGCTGCA+AGG | + | chr4.1:39124810-39124829 | None:intergenic | 45.0% | |
GTGTGGTTTGATTGGATGGA+TGG | - | chr4.1:39124358-39124377 | MS.gene08629:intron | 45.0% | |
GTTATCGGGATCTGGGAAAT+CGG | + | chr4.1:39121549-39121568 | None:intergenic | 45.0% | |
GTTGACCAATGGAAGCTTGT+TGG | + | chr4.1:39123062-39123081 | None:intergenic | 45.0% | |
TACTATCCGATGAACTCCTC+AGG | + | chr4.1:39123812-39123831 | None:intergenic | 45.0% | |
TAGAGTGAGGTGTACACCAA+GGG | + | chr4.1:39124494-39124513 | None:intergenic | 45.0% | |
TAGGTTTATGCTCCTTGGTG+TGG | - | chr4.1:39125528-39125547 | MS.gene08629:intron | 45.0% | |
TAGTTTCCACACTTCCCCAA+AGG | - | chr4.1:39124705-39124724 | MS.gene08629:CDS | 45.0% | |
TCTTGAGCAAGACCAAAGCA+GGG | + | chr4.1:39122873-39122892 | None:intergenic | 45.0% | |
TGCAAGGCATGCAATTGACA+TGG | - | chr4.1:39123536-39123555 | MS.gene08629:intron | 45.0% | |
TGGTTGAATTCTATGCTCCG+TGG | - | chr4.1:39121732-39121751 | MS.gene08629:intron | 45.0% | |
TTCGTCGTCGTCGAAGTTAT+CGG | + | chr4.1:39121564-39121583 | None:intergenic | 45.0% | |
TTCTTGAGCAAGACCAAAGC+AGG | + | chr4.1:39122874-39122893 | None:intergenic | 45.0% | |
TTTGCATGTGTGTGTGCATG+TGG | - | chr4.1:39125803-39125822 | MS.gene08629:CDS | 45.0% | |
TTTGGCTAAGGTGGATGCTT+CGG | - | chr4.1:39121826-39121845 | MS.gene08629:intron | 45.0% | |
! | ATTGAATGTAACGGTGTCGG+TGG | - | chr4.1:39122170-39122189 | MS.gene08629:CDS | 45.0% |
! | TCATTGTCAAGCTTTAGCCC+CGG | - | chr4.1:39121760-39121779 | MS.gene08629:intron | 45.0% |
! | TTTTTCCTGCTGGGTAGAAG+AGG | + | chr4.1:39125876-39125895 | None:intergenic | 45.0% |
!! | GTTGGTTTCTGGAGTTGGAA+TGG | + | chr4.1:39126088-39126107 | None:intergenic | 45.0% |
!! | TGTATGTTGGTTCCAAGGCT+TGG | + | chr4.1:39125560-39125579 | None:intergenic | 45.0% |
!! | TTGAAGTGACGGTGCTATGT+AGG | - | chr4.1:39122215-39122234 | MS.gene08629:intron | 45.0% |
!! | TTGAGGTTGGTTTCTGGAGT+TGG | + | chr4.1:39126093-39126112 | None:intergenic | 45.0% |
!! | TTGGCGAGCTTGTTGTATGT+TGG | + | chr4.1:39125573-39125592 | None:intergenic | 45.0% |
!!! | ATCGTCGTCGATGTCGTTTT+GGG | + | chr4.1:39121462-39121481 | None:intergenic | 45.0% |
!!! | CGGAACTCTTTTTTCCTGCT+GGG | + | chr4.1:39125885-39125904 | None:intergenic | 45.0% |
!!! | TCGGAACTCTTTTTTCCTGC+TGG | + | chr4.1:39125886-39125905 | None:intergenic | 45.0% |
!!! | TGGTGTTGTTTTGGCTAAGG+TGG | - | chr4.1:39121817-39121836 | MS.gene08629:intron | 45.0% |
!!! | GTTTTTTTTTTTTTTTTTAA+TGG | + | chr4.1:39124647-39124666 | None:intergenic | 5.0% |
ACACTCCGACGAAGACTTCA+AGG | - | chr4.1:39121628-39121647 | MS.gene08629:intron | 50.0% | |
CACACATGCAAAAGCCACAG+TGG | + | chr4.1:39125795-39125814 | None:intergenic | 50.0% | |
CCAAACCGTGCTTCCTAATG+TGG | - | chr4.1:39122813-39122832 | MS.gene08629:intron | 50.0% | |
CCTAGGGCAAAGGTAAAACC+CGG | - | chr4.1:39125654-39125673 | MS.gene08629:CDS | 50.0% | |
CGTCGAAGTTATCGGGATCT+GGG | + | chr4.1:39121556-39121575 | None:intergenic | 50.0% | |
CTGGGTAGAAGAGGAGAGTA+GGG | + | chr4.1:39125867-39125886 | None:intergenic | 50.0% | |
GAATTCTATGCTCCGTGGTG+TGG | - | chr4.1:39121737-39121756 | MS.gene08629:intron | 50.0% | |
GACGAATTCGGCGATTTCTC+CGG | - | chr4.1:39121596-39121615 | MS.gene08629:intron | 50.0% | |
GATAACTTCGACGACGACGA+AGG | - | chr4.1:39121563-39121582 | MS.gene08629:intron | 50.0% | |
GCAGCTGATCTTTGTTCACG+TGG | - | chr4.1:39124811-39124830 | MS.gene08629:intron | 50.0% | |
GCGACGGAGTTGAAGAAAGA+TGG | - | chr4.1:39121797-39121816 | MS.gene08629:intron | 50.0% | |
GCTTGACAATGACCACACCA+CGG | + | chr4.1:39121752-39121771 | None:intergenic | 50.0% | |
GGTCTTGCTCAAGAAAGAGG+AGG | - | chr4.1:39122879-39122898 | MS.gene08629:intron | 50.0% | |
GTAGAGTGAGGTGTACACCA+AGG | + | chr4.1:39124495-39124514 | None:intergenic | 50.0% | |
TCGTCGAAGTTATCGGGATC+TGG | + | chr4.1:39121557-39121576 | None:intergenic | 50.0% | |
TCGTCGTCGTCGAAGTTATC+GGG | + | chr4.1:39121563-39121582 | None:intergenic | 50.0% | |
TGTTGATGTGGATCGGACAG+TGG | - | chr4.1:39126024-39126043 | MS.gene08629:CDS | 50.0% | |
TTGAAGTCTTCGTCGGAGTG+TGG | + | chr4.1:39121629-39121648 | None:intergenic | 50.0% | |
TTGGTTCCAAGGCTTGGCAA+TGG | + | chr4.1:39125554-39125573 | None:intergenic | 50.0% | |
! | AAGGATCCTTTGGGGAAGTG+TGG | + | chr4.1:39124714-39124733 | None:intergenic | 50.0% |
! | ATTCTGGAGAGGGAAGAGAG+TGG | + | chr4.1:39122938-39122957 | None:intergenic | 50.0% |
! | CCACATTAGGAAGCACGGTT+TGG | + | chr4.1:39122816-39122835 | None:intergenic | 50.0% |
! | TAGTGGGAGTTCTGACGTCA+AGG | - | chr4.1:39126126-39126145 | MS.gene08629:CDS | 50.0% |
!! | ATGTCCAGCGGTGTCATTTG+CGG | - | chr4.1:39123618-39123637 | MS.gene08629:intron | 50.0% |
!! | CATCGTCGTCGATGTCGTTT+TGG | + | chr4.1:39121463-39121482 | None:intergenic | 50.0% |
!! | CCGTGTTGGTGTTGATTCTC+TGG | - | chr4.1:39122636-39122655 | MS.gene08629:intron | 50.0% |
!! | TGGTGTCTTCTGGTTCTTCG+AGG | + | chr4.1:39121499-39121518 | None:intergenic | 50.0% |
!! | TTAACATGGGTTGGGACCCA+AGG | + | chr4.1:39125737-39125756 | None:intergenic | 50.0% |
ACTCTCCTCTTCTACCCAGC+AGG | - | chr4.1:39125868-39125887 | MS.gene08629:CDS | 55.0% | |
AGATGTCAAGCGCCCTGCTT+TGG | - | chr4.1:39122858-39122877 | MS.gene08629:intron | 55.0% | |
GAGTAGCAGCACAGACGTGA+AGG | - | chr4.1:39126156-39126175 | MS.gene08629:CDS | 55.0% | |
GCTGGGTAGAAGAGGAGAGT+AGG | + | chr4.1:39125868-39125887 | None:intergenic | 55.0% | |
GTAGTGTGTTTCCGGTGTCC+AGG | + | chr4.1:39122115-39122134 | None:intergenic | 55.0% | |
GTCGGAGTGTGGATCGTAAC+CGG | + | chr4.1:39121618-39121637 | None:intergenic | 55.0% | |
TGATGTGGATCGGACAGTGG+TGG | - | chr4.1:39126027-39126046 | MS.gene08629:CDS | 55.0% | |
TTTAGCCCCGGAGTATGCTG+CGG | - | chr4.1:39121772-39121791 | MS.gene08629:intron | 55.0% | |
! | AAAGCAGGGCGCTTGACATC+TGG | + | chr4.1:39122859-39122878 | None:intergenic | 55.0% |
! | AAGCAGGGCGCTTGACATCT+GGG | + | chr4.1:39122858-39122877 | None:intergenic | 55.0% |
! | CCGGGGTATCAGTGCCATAT+CGG | + | chr4.1:39122038-39122057 | None:intergenic | 55.0% |
! | CCGGGTTTTACCTTTGCCCT+AGG | + | chr4.1:39125657-39125676 | None:intergenic | 55.0% |
!! | CCGATATGGCACTGATACCC+CGG | - | chr4.1:39122035-39122054 | MS.gene08629:intron | 55.0% |
!! | GGTGTCATTTGCGGCTGAGT+AGG | - | chr4.1:39123627-39123646 | MS.gene08629:intron | 55.0% |
!! | GTTTGGTGTTGCCTGGACAC+CGG | - | chr4.1:39122101-39122120 | MS.gene08629:intron | 55.0% |
!! | TGTAACGGTGTCGGTGGACA+CGG | - | chr4.1:39122176-39122195 | MS.gene08629:CDS | 55.0% |
!! | TGTGTGGTGGTGGTGTCTTC+TGG | + | chr4.1:39121509-39121528 | None:intergenic | 55.0% |
AATCGGCGTGGTCGTGGTTG+TGG | + | chr4.1:39121532-39121551 | None:intergenic | 60.0% | |
GACGACGACGAAGGCGATGA+CGG | - | chr4.1:39121572-39121591 | MS.gene08629:intron | 60.0% | |
GCTTGGCAATGGCCACACCA+AGG | + | chr4.1:39125543-39125562 | None:intergenic | 60.0% | |
GGCTAAGGTGGATGCTTCGG+TGG | - | chr4.1:39121829-39121848 | MS.gene08629:intron | 60.0% | |
GTCGTGGTTGTGGTGTGTGG+TGG | + | chr4.1:39121522-39121541 | None:intergenic | 60.0% | |
GTGGTCGTGGTTGTGGTGTG+TGG | + | chr4.1:39121525-39121544 | None:intergenic | 60.0% | |
GTGGTTGTGGTGTGTGGTGG+TGG | + | chr4.1:39121519-39121538 | None:intergenic | 60.0% | |
GTGTGGCCATTGCCAAGCCT+TGG | - | chr4.1:39125545-39125564 | MS.gene08629:intron | 60.0% | |
TCAGCCGCAAATGACACCGC+TGG | + | chr4.1:39123625-39123644 | None:intergenic | 60.0% | |
TGGCGCAGTGTGTGACTGAG+TGG | - | chr4.1:39123467-39123486 | MS.gene08629:intron | 60.0% | |
! | GGCGATGACGGCGACGAATT+CGG | - | chr4.1:39121584-39121603 | MS.gene08629:intron | 60.0% |
!! | GTAACGGTGTCGGTGGACAC+GGG | - | chr4.1:39122177-39122196 | MS.gene08629:CDS | 60.0% |
CGGGATCTGGGAAATCGGCG+TGG | + | chr4.1:39121544-39121563 | None:intergenic | 65.0% | |
CTGGGAAATCGGCGTGGTCG+TGG | + | chr4.1:39121538-39121557 | None:intergenic | 65.0% | |
AGCCCCGGAGTATGCTGCGG+CGG | - | chr4.1:39121775-39121794 | MS.gene08629:intron | 70.0% | |
GGAGTATGCTGCGGCGGCGA+CGG | - | chr4.1:39121781-39121800 | MS.gene08629:intron | 70.0% | |
GTCGCCGCCGCAGCATACTC+CGG | + | chr4.1:39121782-39121801 | None:intergenic | 70.0% | |
TCGCCGCCGCAGCATACTCC+GGG | + | chr4.1:39121781-39121800 | None:intergenic | 70.0% | |
CGCCGCCGCAGCATACTCCG+GGG | + | chr4.1:39121780-39121799 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 39121371 | 39126189 | 39121371 | ID=MS.gene08629 |
chr4.1 | mRNA | 39121371 | 39126189 | 39121371 | ID=MS.gene08629.t1;Parent=MS.gene08629 |
chr4.1 | exon | 39125612 | 39126189 | 39125612 | ID=MS.gene08629.t1.exon1;Parent=MS.gene08629.t1 |
chr4.1 | CDS | 39125612 | 39126189 | 39125612 | ID=cds.MS.gene08629.t1;Parent=MS.gene08629.t1 |
chr4.1 | exon | 39125114 | 39125243 | 39125114 | ID=MS.gene08629.t1.exon2;Parent=MS.gene08629.t1 |
chr4.1 | CDS | 39125114 | 39125243 | 39125114 | ID=cds.MS.gene08629.t1;Parent=MS.gene08629.t1 |
chr4.1 | exon | 39124641 | 39124806 | 39124641 | ID=MS.gene08629.t1.exon3;Parent=MS.gene08629.t1 |
chr4.1 | CDS | 39124641 | 39124806 | 39124641 | ID=cds.MS.gene08629.t1;Parent=MS.gene08629.t1 |
chr4.1 | exon | 39124425 | 39124543 | 39124425 | ID=MS.gene08629.t1.exon4;Parent=MS.gene08629.t1 |
chr4.1 | CDS | 39124425 | 39124543 | 39124425 | ID=cds.MS.gene08629.t1;Parent=MS.gene08629.t1 |
chr4.1 | exon | 39124231 | 39124311 | 39124231 | ID=MS.gene08629.t1.exon5;Parent=MS.gene08629.t1 |
chr4.1 | CDS | 39124231 | 39124311 | 39124231 | ID=cds.MS.gene08629.t1;Parent=MS.gene08629.t1 |
chr4.1 | exon | 39122659 | 39122745 | 39122659 | ID=MS.gene08629.t1.exon6;Parent=MS.gene08629.t1 |
chr4.1 | CDS | 39122659 | 39122745 | 39122659 | ID=cds.MS.gene08629.t1;Parent=MS.gene08629.t1 |
chr4.1 | exon | 39122478 | 39122552 | 39122478 | ID=MS.gene08629.t1.exon7;Parent=MS.gene08629.t1 |
chr4.1 | CDS | 39122478 | 39122552 | 39122478 | ID=cds.MS.gene08629.t1;Parent=MS.gene08629.t1 |
chr4.1 | exon | 39122276 | 39122344 | 39122276 | ID=MS.gene08629.t1.exon8;Parent=MS.gene08629.t1 |
chr4.1 | CDS | 39122276 | 39122344 | 39122276 | ID=cds.MS.gene08629.t1;Parent=MS.gene08629.t1 |
chr4.1 | exon | 39122118 | 39122198 | 39122118 | ID=MS.gene08629.t1.exon9;Parent=MS.gene08629.t1 |
chr4.1 | CDS | 39122118 | 39122198 | 39122118 | ID=cds.MS.gene08629.t1;Parent=MS.gene08629.t1 |
chr4.1 | exon | 39121895 | 39122029 | 39121895 | ID=MS.gene08629.t1.exon10;Parent=MS.gene08629.t1 |
chr4.1 | CDS | 39121895 | 39122029 | 39121895 | ID=cds.MS.gene08629.t1;Parent=MS.gene08629.t1 |
chr4.1 | exon | 39121651 | 39121707 | 39121651 | ID=MS.gene08629.t1.exon11;Parent=MS.gene08629.t1 |
chr4.1 | CDS | 39121651 | 39121707 | 39121651 | ID=cds.MS.gene08629.t1;Parent=MS.gene08629.t1 |
chr4.1 | exon | 39121371 | 39121541 | 39121371 | ID=MS.gene08629.t1.exon12;Parent=MS.gene08629.t1 |
chr4.1 | CDS | 39121371 | 39121541 | 39121371 | ID=cds.MS.gene08629.t1;Parent=MS.gene08629.t1 |
Gene Sequence |
Protein sequence |