Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70661.t1 | RHN68735.1 | 98.7 | 471 | 6 | 0 | 1 | 471 | 261 | 731 | 4.20E-279 | 969.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70661.t1 | Q9FML2 | 74.2 | 472 | 112 | 5 | 4 | 470 | 3 | 469 | 4.8e-207 | 721.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70661.t1 | G7J4T5 | 98.7 | 471 | 6 | 0 | 1 | 471 | 6 | 476 | 3.0e-279 | 969.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049283 | MS.gene70661 | 0.824121 | 9.58E-54 | -1.69E-46 |
| MS.gene050945 | MS.gene70661 | 0.901041 | 4.00E-78 | -1.69E-46 |
| MS.gene051597 | MS.gene70661 | 0.811862 | 5.66E-51 | -1.69E-46 |
| MS.gene051699 | MS.gene70661 | 0.841667 | 4.13E-58 | -1.69E-46 |
| MS.gene052793 | MS.gene70661 | 0.813128 | 2.99E-51 | -1.69E-46 |
| MS.gene053963 | MS.gene70661 | 0.802497 | 5.46E-49 | -1.69E-46 |
| MS.gene054413 | MS.gene70661 | 0.856786 | 2.54E-62 | -1.69E-46 |
| MS.gene054957 | MS.gene70661 | 0.802204 | 6.27E-49 | -1.69E-46 |
| MS.gene055150 | MS.gene70661 | 0.804723 | 1.88E-49 | -1.69E-46 |
| MS.gene05548 | MS.gene70661 | 0.811591 | 6.49E-51 | -1.69E-46 |
| MS.gene057102 | MS.gene70661 | 0.800467 | 1.42E-48 | -1.69E-46 |
| MS.gene057705 | MS.gene70661 | 0.809544 | 1.80E-50 | -1.69E-46 |
| MS.gene059146 | MS.gene70661 | 0.802148 | 6.44E-49 | -1.69E-46 |
| MS.gene05952 | MS.gene70661 | 0.817187 | 3.76E-52 | -1.69E-46 |
| MS.gene05985 | MS.gene70661 | -0.826243 | 3.02E-54 | -1.69E-46 |
| MS.gene06018 | MS.gene70661 | 0.809312 | 2.01E-50 | -1.69E-46 |
| MS.gene060935 | MS.gene70661 | 0.815602 | 8.50E-52 | -1.69E-46 |
| MS.gene060937 | MS.gene70661 | 0.822516 | 2.27E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene49890 | MS.gene70661 | PPI |
| MS.gene028725 | MS.gene70661 | PPI |
| MS.gene38997 | MS.gene70661 | PPI |
| MS.gene70661 | MS.gene007856 | PPI |
| MS.gene70661 | MS.gene027729 | PPI |
| MS.gene70661 | MS.gene058947 | PPI |
| MS.gene29165 | MS.gene70661 | PPI |
| MS.gene68113 | MS.gene70661 | PPI |
| MS.gene021991 | MS.gene70661 | PPI |
| MS.gene007656 | MS.gene70661 | PPI |
| MS.gene063067 | MS.gene70661 | PPI |
| MS.gene074335 | MS.gene70661 | PPI |
| MS.gene78117 | MS.gene70661 | PPI |
| MS.gene70661 | MS.gene032322 | PPI |
| MS.gene44717 | MS.gene70661 | PPI |
| MS.gene70661 | MS.gene000865 | PPI |
| MS.gene056316 | MS.gene70661 | PPI |
| MS.gene32239 | MS.gene70661 | PPI |
| MS.gene86222 | MS.gene70661 | PPI |
| MS.gene68716 | MS.gene70661 | PPI |
| MS.gene44289 | MS.gene70661 | PPI |
| MS.gene08875 | MS.gene70661 | PPI |
| MS.gene08629 | MS.gene70661 | PPI |
| MS.gene70661 | MS.gene31296 | PPI |
| MS.gene014181 | MS.gene70661 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70661.t1 | MTR_3g077160 | 99.575 | 471 | 2 | 0 | 1 | 471 | 6 | 476 | 0.0 | 979 |
| MS.gene70661.t1 | MTR_3g118535 | 63.514 | 444 | 148 | 3 | 8 | 451 | 5 | 434 | 0.0 | 590 |
| MS.gene70661.t1 | MTR_5g004640 | 68.579 | 401 | 121 | 2 | 6 | 406 | 7 | 402 | 0.0 | 587 |
| MS.gene70661.t1 | MTR_4g055080 | 54.884 | 430 | 181 | 3 | 20 | 440 | 4 | 429 | 3.90e-172 | 491 |
| MS.gene70661.t1 | MTR_4g055080 | 55.392 | 408 | 169 | 3 | 42 | 440 | 1 | 404 | 4.42e-163 | 467 |
| MS.gene70661.t1 | MTR_3g077120 | 91.848 | 184 | 15 | 0 | 1 | 184 | 6 | 189 | 1.75e-122 | 355 |
| MS.gene70661.t1 | MTR_2g087270 | 33.516 | 182 | 111 | 3 | 156 | 327 | 154 | 335 | 3.07e-24 | 104 |
| MS.gene70661.t1 | MTR_4g109500 | 26.748 | 329 | 216 | 10 | 14 | 326 | 10 | 329 | 7.77e-24 | 105 |
| MS.gene70661.t1 | MTR_4g109500 | 26.748 | 329 | 216 | 10 | 14 | 326 | 10 | 329 | 7.99e-24 | 105 |
| MS.gene70661.t1 | MTR_4g111985 | 25.723 | 311 | 213 | 8 | 40 | 344 | 257 | 555 | 1.35e-20 | 95.5 |
| MS.gene70661.t1 | MTR_4g111985 | 25.723 | 311 | 213 | 8 | 40 | 344 | 218 | 516 | 2.36e-20 | 94.4 |
| MS.gene70661.t1 | MTR_8g093800 | 33.333 | 141 | 91 | 2 | 156 | 294 | 198 | 337 | 2.38e-18 | 87.4 |
| MS.gene70661.t1 | MTR_4g111985 | 26.481 | 287 | 188 | 9 | 40 | 317 | 218 | 490 | 8.84e-18 | 86.3 |
| MS.gene70661.t1 | MTR_1g016440 | 25.407 | 307 | 202 | 10 | 22 | 319 | 32 | 320 | 4.47e-17 | 82.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70661.t1 | AT5G63110 | 74.788 | 472 | 109 | 5 | 4 | 470 | 3 | 469 | 0.0 | 723 |
| MS.gene70661.t1 | AT4G38130 | 69.157 | 415 | 121 | 3 | 5 | 417 | 2 | 411 | 0.0 | 600 |
| MS.gene70661.t1 | AT4G38130 | 69.157 | 415 | 121 | 3 | 5 | 417 | 2 | 411 | 0.0 | 599 |
| MS.gene70661.t1 | AT5G35600 | 60.149 | 404 | 155 | 2 | 16 | 417 | 5 | 404 | 2.15e-177 | 503 |
| MS.gene70661.t1 | AT3G44680 | 55.294 | 425 | 177 | 5 | 20 | 435 | 4 | 424 | 2.32e-171 | 488 |
| MS.gene70661.t1 | AT3G44490 | 38.065 | 155 | 88 | 3 | 289 | 435 | 2 | 156 | 1.59e-32 | 121 |
| MS.gene70661.t1 | AT5G61060 | 27.019 | 322 | 213 | 9 | 20 | 326 | 24 | 338 | 1.41e-24 | 107 |
| MS.gene70661.t1 | AT3G18520 | 31.795 | 195 | 128 | 4 | 156 | 345 | 276 | 470 | 3.18e-24 | 105 |
| MS.gene70661.t1 | AT3G18520 | 31.795 | 195 | 128 | 4 | 156 | 345 | 276 | 470 | 3.62e-24 | 105 |
| MS.gene70661.t1 | AT3G18520 | 31.795 | 195 | 128 | 4 | 156 | 345 | 276 | 470 | 3.92e-24 | 105 |
| MS.gene70661.t1 | AT1G08460 | 27.052 | 329 | 202 | 8 | 17 | 327 | 18 | 326 | 9.22e-24 | 102 |
| MS.gene70661.t1 | AT5G61060 | 26.687 | 326 | 213 | 10 | 20 | 326 | 24 | 342 | 1.39e-22 | 101 |
| MS.gene70661.t1 | AT5G61070 | 25.776 | 322 | 217 | 9 | 20 | 326 | 57 | 371 | 1.12e-21 | 99.0 |
| MS.gene70661.t1 | AT3G44660 | 33.548 | 155 | 79 | 4 | 289 | 435 | 2 | 140 | 1.35e-21 | 91.3 |
| MS.gene70661.t1 | AT1G08460 | 27.698 | 278 | 168 | 7 | 17 | 281 | 18 | 275 | 7.69e-21 | 93.6 |
| MS.gene70661.t1 | AT3G18520 | 32.353 | 170 | 110 | 4 | 156 | 320 | 276 | 445 | 4.08e-20 | 93.2 |
| MS.gene70661.t1 | AT4G33470 | 32.812 | 128 | 83 | 2 | 156 | 281 | 201 | 327 | 1.16e-16 | 82.4 |
| MS.gene70661.t1 | AT5G26040 | 25.817 | 306 | 202 | 11 | 22 | 319 | 73 | 361 | 1.07e-15 | 79.0 |
Find 135 sgRNAs with CRISPR-Local
Find 406 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGAGTATTATGAATATTT+TGG | 0.162867 | 3.1:+63496164 | MS.gene70661:CDS |
| GGTGATTTCTTCCCTGGAAC+TGG | 0.198514 | 3.1:+63495672 | MS.gene70661:CDS |
| TCATCCATTCCATCATTTAA+TGG | 0.215305 | 3.1:-63495747 | None:intergenic |
| TAAGAAGTACAAACCTCTTC+TGG | 0.219614 | 3.1:-63497291 | None:intergenic |
| CAATGTTCCTCTAATGGTCT+TGG | 0.269434 | 3.1:+63495941 | MS.gene70661:CDS |
| CCATATCCTTGGGTGTGTTT+AGG | 0.282433 | 3.1:-63496229 | None:intergenic |
| GCTTCTGCTGGTGGATCTAT+TGG | 0.286027 | 3.1:+63494294 | MS.gene70661:CDS |
| GTCTTTCAATGTTCCTCTAA+TGG | 0.288168 | 3.1:+63495935 | MS.gene70661:CDS |
| TAAACTTGAGCTCCTTATAT+TGG | 0.291327 | 3.1:-63497463 | None:intergenic |
| CCACTCCACAACTGACGTTT+TGG | 0.296573 | 3.1:-63497402 | None:intergenic |
| TATTCATAATACTCATTATA+TGG | 0.300885 | 3.1:-63496158 | None:intergenic |
| TTGAGCTTCTCAAAGTTCAT+AGG | 0.301104 | 3.1:+63494442 | MS.gene70661:CDS |
| GCTAAGAAAGCTGAAGCTTC+TGG | 0.305922 | 3.1:+63494384 | MS.gene70661:CDS |
| TCTGGGACTTCTGCAGTTGA+TGG | 0.307398 | 3.1:-63497273 | None:intergenic |
| CCTAAACACACCCAAGGATA+TGG | 0.316180 | 3.1:+63496229 | MS.gene70661:CDS |
| TTCTCTGTCCGGTGACAGGC+TGG | 0.318503 | 3.1:+63495860 | MS.gene70661:CDS |
| CGGATACGATGGGGTTTCAT+TGG | 0.337833 | 3.1:-63494033 | None:intergenic |
| TCCTCTAATGGTCTTGGGTG+GGG | 0.342028 | 3.1:+63495947 | MS.gene70661:CDS |
| TCTTTAATATGCCCAGTTCC+AGG | 0.354452 | 3.1:-63495684 | None:intergenic |
| ATGCTGATATTGCTATCAAT+TGG | 0.364214 | 3.1:+63494343 | MS.gene70661:CDS |
| GATCTATTGGTGCTGCTGTT+AGG | 0.365526 | 3.1:+63494307 | MS.gene70661:CDS |
| TATGTTAATGACATTGTTCT+TGG | 0.365568 | 3.1:+63494414 | MS.gene70661:CDS |
| AATGTTCCTCTAATGGTCTT+GGG | 0.379258 | 3.1:+63495942 | MS.gene70661:CDS |
| CCGTTCTGCCAGGCTTCTGC+TGG | 0.379839 | 3.1:+63494282 | MS.gene70661:CDS |
| AAGATGAGAAGGCCAATATA+AGG | 0.387878 | 3.1:+63497451 | MS.gene70661:CDS |
| AAGTTTGGTGATTTCTTCCC+TGG | 0.389907 | 3.1:+63495666 | MS.gene70661:CDS |
| CCTCTAATGGTCTTGGGTGG+GGG | 0.391223 | 3.1:+63495948 | MS.gene70661:CDS |
| AAAGACACTGGTGTGGGCCC+TGG | 0.397372 | 3.1:+63495702 | MS.gene70661:CDS |
| TTTAGGTTCTCCATGTTGTT+TGG | 0.397924 | 3.1:-63496212 | None:intergenic |
| CGTTTCGCCGGAGATTGTTT+CGG | 0.398779 | 3.1:+63494182 | MS.gene70661:CDS |
| TTATATGGCAACTTATTACT+TGG | 0.400243 | 3.1:-63496143 | None:intergenic |
| TGCACACCAGGCTTAACTTC+TGG | 0.406949 | 3.1:-63499390 | None:intergenic |
| CAGACTGCCTTCGTTTCCTT+AGG | 0.423655 | 3.1:+63495913 | MS.gene70661:CDS |
| TCAACATGAAGTGTATAGTC+TGG | 0.428422 | 3.1:-63496188 | None:intergenic |
| ATAATTCGCACTCTCATTAT+CGG | 0.436938 | 3.1:+63494205 | MS.gene70661:CDS |
| CCGTCCTTTCGCCGCTGCGC+CGG | 0.438153 | 3.1:+63494110 | MS.gene70661:CDS |
| AAGAAGTACAAACCTCTTCT+GGG | 0.438301 | 3.1:-63497290 | None:intergenic |
| CTGATTCTCTGTCCGGTGAC+AGG | 0.439759 | 3.1:+63495856 | MS.gene70661:CDS |
| CAAGTTTAACTTCTCATATG+AGG | 0.448062 | 3.1:+63497478 | MS.gene70661:CDS |
| GTGATTTCTTCCCTGGAACT+GGG | 0.451815 | 3.1:+63495673 | MS.gene70661:CDS |
| GGCGCATCACTTCCTTCAAT+CGG | 0.452538 | 3.1:+63493934 | MS.gene70661:CDS |
| ATTGGCCTTCTCATCTTCAT+CGG | 0.452747 | 3.1:-63497445 | None:intergenic |
| ACTGGGAGCATGAGGAAGTC+TGG | 0.454000 | 3.1:-63497232 | None:intergenic |
| ATGTTAATGACATTGTTCTT+GGG | 0.459037 | 3.1:+63494415 | MS.gene70661:CDS |
| TTGGCCTTCTCATCTTCATC+GGG | 0.463989 | 3.1:-63497444 | None:intergenic |
| TTGCTTCAACTTATCTGTGA+AGG | 0.467935 | 3.1:+63495884 | MS.gene70661:CDS |
| ATTGCGTCGGCGCCGATTGA+AGG | 0.476149 | 3.1:-63493946 | None:intergenic |
| TTCCTCTAATGGTCTTGGGT+GGG | 0.478365 | 3.1:+63495946 | MS.gene70661:CDS |
| GGATACGATGGGGTTTCATT+GGG | 0.482053 | 3.1:-63494032 | None:intergenic |
| AAGACACTGGTGTGGGCCCT+GGG | 0.482800 | 3.1:+63495703 | MS.gene70661:CDS |
| CTAAATGTTCCATTAAATGA+TGG | 0.484418 | 3.1:+63495738 | MS.gene70661:CDS |
| CAGGCGCGCAGCAGATATGA+TGG | 0.487795 | 3.1:+63499356 | MS.gene70661:intron |
| CATTGAAGAACAACTGCATC+AGG | 0.488172 | 3.1:-63495828 | None:intergenic |
| TGAGCTTCTCAAAGTTCATA+GGG | 0.489498 | 3.1:+63494443 | MS.gene70661:CDS |
| TTCTGCCAGGCTTCTGCTGG+TGG | 0.491521 | 3.1:+63494285 | MS.gene70661:CDS |
| TGCTGATATTGCTATCAATT+GGG | 0.493745 | 3.1:+63494344 | MS.gene70661:CDS |
| TTTAGAGCATAGTCCTTCCC+AGG | 0.496376 | 3.1:-63495720 | None:intergenic |
| CGAAACAATCTCCGGCGAAA+CGG | 0.497459 | 3.1:-63494181 | None:intergenic |
| CTCATTATCGGCAGTTGAAG+AGG | 0.497951 | 3.1:+63494217 | MS.gene70661:CDS |
| TAGATCCACCAGCAGAAGCC+TGG | 0.503184 | 3.1:-63494290 | None:intergenic |
| CACTGGTGTGGGCCCTGGGA+AGG | 0.503203 | 3.1:+63495707 | MS.gene70661:CDS |
| TGTGGAGCTGATTCTCTGTC+CGG | 0.509809 | 3.1:+63495849 | MS.gene70661:CDS |
| TGAAAACGACGGATATCTTC+CGG | 0.514272 | 3.1:-63494129 | None:intergenic |
| TTGCTATCAATTGGGCTGGT+GGG | 0.516313 | 3.1:+63494352 | MS.gene70661:CDS |
| TAGCATGGCGGATGCACACC+AGG | 0.522092 | 3.1:-63499402 | None:intergenic |
| GTGTGCCATGCGGATACGAT+GGG | 0.522435 | 3.1:-63494043 | None:intergenic |
| TACGGAATGTTGCTCGCTGT+TGG | 0.523272 | 3.1:+63495982 | MS.gene70661:CDS |
| TACGCGACGCTTCATTGCGT+CGG | 0.523824 | 3.1:-63493959 | None:intergenic |
| ATTGATGTCCACCACGGAGA+TGG | 0.535310 | 3.1:+63495591 | MS.gene70661:CDS |
| GTTCCTCTAATGGTCTTGGG+TGG | 0.536209 | 3.1:+63495945 | MS.gene70661:CDS |
| GTTTCTCTCTACCGTTTCGC+CGG | 0.541327 | 3.1:+63494170 | MS.gene70661:CDS |
| TCTCTGTCCGGTGACAGGCT+GGG | 0.541899 | 3.1:+63495861 | MS.gene70661:CDS |
| TGCTTCAACTTATCTGTGAA+GGG | 0.544303 | 3.1:+63495885 | MS.gene70661:CDS |
| TGTTCCATTAAATGATGGAA+TGG | 0.544886 | 3.1:+63495743 | MS.gene70661:CDS |
| GATATTGCTATCAATTGGGC+TGG | 0.547091 | 3.1:+63494348 | MS.gene70661:CDS |
| CTTTAATATGCCCAGTTCCA+GGG | 0.549835 | 3.1:-63495683 | None:intergenic |
| GACAGCCGTAGCAGTAGGAG+TGG | 0.550022 | 3.1:+63496118 | MS.gene70661:intron |
| GTTGATGGTGTTGTCTGAAA+AGG | 0.556815 | 3.1:-63497258 | None:intergenic |
| CAACATGAAGTGTATAGTCT+GGG | 0.557487 | 3.1:-63496187 | None:intergenic |
| GAAGCAACCCAGCCTGTCAC+CGG | 0.558310 | 3.1:-63495868 | None:intergenic |
| TAGTAATAATCACCGATGCT+TGG | 0.566387 | 3.1:-63493997 | None:intergenic |
| TCTTCCGGCGCAGCGGCGAA+AGG | 0.566477 | 3.1:-63494114 | None:intergenic |
| GAAGAGGTTTAATGTTGGTG+AGG | 0.566822 | 3.1:+63494233 | MS.gene70661:CDS |
| TGTTGTCTGAAAAGGAGCAC+TGG | 0.567341 | 3.1:-63497250 | None:intergenic |
| CCGGCGCAGCGGCGAAAGGA+CGG | 0.572675 | 3.1:-63494110 | None:intergenic |
| ATTGCTATCAATTGGGCTGG+TGG | 0.572810 | 3.1:+63494351 | MS.gene70661:CDS |
| CATATTAAAGACACTGGTGT+GGG | 0.574798 | 3.1:+63495696 | MS.gene70661:CDS |
| CACTACTGATCGAGTGATGA+CGG | 0.577875 | 3.1:+63495632 | MS.gene70661:CDS |
| GAGGAACATTGAAAGACCTA+AGG | 0.578248 | 3.1:-63495929 | None:intergenic |
| TGGCTCCACTCCTACTGCTA+CGG | 0.580283 | 3.1:-63496123 | None:intergenic |
| TAAGACCAAAACGTCAGTTG+TGG | 0.581073 | 3.1:+63497397 | MS.gene70661:CDS |
| CCACGGAGATGGCGTTGAGG+AGG | 0.585580 | 3.1:+63495602 | MS.gene70661:CDS |
| GATAAGCCAGAAGTTAAGCC+TGG | 0.586048 | 3.1:+63499384 | MS.gene70661:CDS |
| AGCATCGGTGATTATTACTA+CGG | 0.586313 | 3.1:+63494000 | MS.gene70661:CDS |
| GATGCTTGGTTCGTAGAAGT+AGG | 0.586398 | 3.1:-63493983 | None:intergenic |
| TGATTGGGTTCAGGAAGAAG+AGG | 0.586939 | 3.1:+63497365 | MS.gene70661:intron |
| TGATCCCGATGAAGATGAGA+AGG | 0.591520 | 3.1:+63497440 | MS.gene70661:CDS |
| AACTGCAGAAGTCCCAGAAG+AGG | 0.594278 | 3.1:+63497278 | MS.gene70661:CDS |
| TGTGTGCCATGCGGATACGA+TGG | 0.599376 | 3.1:-63494044 | None:intergenic |
| CCAGCAGAAGCCTGGCAGAA+CGG | 0.601021 | 3.1:-63494282 | None:intergenic |
| AAAGGAGCACTGGGAGCATG+AGG | 0.606610 | 3.1:-63497240 | None:intergenic |
| CCTCAACGCCATCTCCGTGG+TGG | 0.607325 | 3.1:-63495599 | None:intergenic |
| CTGTTCTATCACTATTAGCA+TGG | 0.611145 | 3.1:-63499417 | None:intergenic |
| GGTGATTATTACTACGGTCA+AGG | 0.613456 | 3.1:+63494006 | MS.gene70661:CDS |
| GGTTAATTTGCATACGACGG+TGG | 0.614286 | 3.1:-63494089 | None:intergenic |
| TGCTCGCTGTTGGTGTTACG+AGG | 0.620146 | 3.1:+63495992 | MS.gene70661:CDS |
| CAGTTGAAGAGGTTTAATGT+TGG | 0.622814 | 3.1:+63494228 | MS.gene70661:CDS |
| TACTTCTACGAACCAAGCAT+CGG | 0.624007 | 3.1:+63493985 | MS.gene70661:CDS |
| GAATTATCCGAAACAATCTC+CGG | 0.624475 | 3.1:-63494189 | None:intergenic |
| GGTTCAGGAAGAAGAGGACA+TGG | 0.629399 | 3.1:+63497371 | MS.gene70661:intron |
| CCTCCTCAACGCCATCTCCG+TGG | 0.639372 | 3.1:-63495602 | None:intergenic |
| ACGGATATCTTCCGGCGCAG+CGG | 0.641271 | 3.1:-63494121 | None:intergenic |
| TTAGAGCATAGTCCTTCCCA+GGG | 0.642465 | 3.1:-63495719 | None:intergenic |
| TGAAAGACCTAAGGAAACGA+AGG | 0.645063 | 3.1:-63495920 | None:intergenic |
| ACTGGGCATATTAAAGACAC+TGG | 0.649212 | 3.1:+63495690 | MS.gene70661:CDS |
| TCATGTTGAACCAAACAACA+TGG | 0.650485 | 3.1:+63496202 | MS.gene70661:CDS |
| CCACCACGGAGATGGCGTTG+AGG | 0.650496 | 3.1:+63495599 | MS.gene70661:CDS |
| GCATATTAAAGACACTGGTG+TGG | 0.651802 | 3.1:+63495695 | MS.gene70661:CDS |
| GAAACCCCATCGTATCCGCA+TGG | 0.656119 | 3.1:+63494038 | MS.gene70661:CDS |
| CCAAAACGTCAGTTGTGGAG+TGG | 0.656576 | 3.1:+63497402 | MS.gene70661:CDS |
| GTTGTCTGAAAAGGAGCACT+GGG | 0.656783 | 3.1:-63497249 | None:intergenic |
| ATGGGTGTAGCTGAGAGCGG+TGG | 0.661640 | 3.1:+63493913 | MS.gene70661:CDS |
| TACGACGGTGGAGAGAGTAG+TGG | 0.662450 | 3.1:-63494077 | None:intergenic |
| TAATGGGACGAAACAGAGCA+CGG | 0.664497 | 3.1:-63495779 | None:intergenic |
| GACGGTTAATTTGCATACGA+CGG | 0.664675 | 3.1:-63494092 | None:intergenic |
| TTCTATCACTATTAGCATGG+CGG | 0.665278 | 3.1:-63499414 | None:intergenic |
| GGAGAACCTAAACACACCCA+AGG | 0.676042 | 3.1:+63496223 | MS.gene70661:CDS |
| GAAATGGGTGTAGCTGAGAG+CGG | 0.684927 | 3.1:+63493910 | None:intergenic |
| GATGCAGTTGTTCTTCAATG+TGG | 0.687349 | 3.1:+63495831 | MS.gene70661:CDS |
| GCGCGCAGCAGATATGATGG+AGG | 0.704047 | 3.1:+63499359 | MS.gene70661:CDS |
| GTTGATATTGATGTCCACCA+CGG | 0.709895 | 3.1:+63495585 | MS.gene70661:CDS |
| TGTGCCATGCGGATACGATG+GGG | 0.722427 | 3.1:-63494042 | None:intergenic |
| GCTGCTGTTAGGCTCAATCG+TGG | 0.733214 | 3.1:+63494318 | MS.gene70661:CDS |
| AATCATCAGAGTGAAAACGA+CGG | 0.771738 | 3.1:-63494140 | None:intergenic |
| TGATGAGATTGTGTGCCATG+CGG | 0.775032 | 3.1:-63494053 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAATCACTTATAAAAAA+AGG | - | chr3.1:63496732-63496751 | None:intergenic | 10.0% |
| !! | AATAAATTTGAAAACATTTA+TGG | + | chr3.1:63499128-63499147 | MS.gene70661:intron | 10.0% |
| !! | ATTATTATGATTATTATGAT+GGG | + | chr3.1:63495400-63495419 | MS.gene70661:intron | 10.0% |
| !! | TAATTAGTAAATAACATATT+AGG | - | chr3.1:63496074-63496093 | None:intergenic | 10.0% |
| !! | TATTATTATGATTATTATGA+TGG | + | chr3.1:63495399-63495418 | MS.gene70661:intron | 10.0% |
| !! | TTAACTTAAAAATATAAAAG+TGG | - | chr3.1:63499109-63499128 | None:intergenic | 10.0% |
| !! | TTATAAACACATTAATTAAT+AGG | + | chr3.1:63499160-63499179 | MS.gene70661:intron | 10.0% |
| !! | AAAGCAAAAAAATATATAAC+AGG | - | chr3.1:63497852-63497871 | None:intergenic | 15.0% |
| !! | TATTCATAATACTCATTATA+TGG | - | chr3.1:63496161-63496180 | None:intergenic | 15.0% |
| !! | TGTCAAACATAAAAAAAAAA+TGG | + | chr3.1:63495441-63495460 | MS.gene70661:intron | 15.0% |
| !!! | AATGAGTATTATGAATATTT+TGG | + | chr3.1:63496164-63496183 | MS.gene70661:CDS | 15.0% |
| !!! | ATTCAGTAAAATTTCTTTTT+TGG | + | chr3.1:63496422-63496441 | MS.gene70661:intron | 15.0% |
| !!! | ATTTCTTAGATTTTAAGAAA+AGG | - | chr3.1:63499321-63499340 | None:intergenic | 15.0% |
| !!! | TATATATTTTTTTGCTTTGT+GGG | + | chr3.1:63497854-63497873 | MS.gene70661:intron | 15.0% |
| !!! | TTAACATATTTTCTTTCTTT+TGG | + | chr3.1:63497826-63497845 | MS.gene70661:intron | 15.0% |
| !!! | TTATATATTTTTTTGCTTTG+TGG | + | chr3.1:63497853-63497872 | MS.gene70661:intron | 15.0% |
| !!! | TTCAGTAAAATTTCTTTTTT+GGG | + | chr3.1:63496423-63496442 | MS.gene70661:intron | 15.0% |
| !!! | TTTTTTTTATGTTTGACAAA+AGG | - | chr3.1:63495439-63495458 | None:intergenic | 15.0% |
| !! | AAAACTTCCATTAAATTTGA+GGG | - | chr3.1:63497935-63497954 | None:intergenic | 20.0% |
| !! | AAATGAATTTGATTACCATT+TGG | + | chr3.1:63499293-63499312 | MS.gene70661:intron | 20.0% |
| !! | ACCAAAAACAAAATTAAACA+AGG | - | chr3.1:63494496-63494515 | None:intergenic | 20.0% |
| !! | ATAAAAAAAGGTTTATTTCC+TGG | - | chr3.1:63496720-63496739 | None:intergenic | 20.0% |
| !! | ATGATAACTGCTTATATATA+AGG | - | chr3.1:63495119-63495138 | None:intergenic | 20.0% |
| !! | GGAAAATATAAGTAATTCTT+AGG | - | chr3.1:63498989-63499008 | None:intergenic | 20.0% |
| !! | TATGAGTAAATCATATTCTT+AGG | + | chr3.1:63498082-63498101 | MS.gene70661:intron | 20.0% |
| !! | TCAATTCTAATACAATCAAA+AGG | - | chr3.1:63496283-63496302 | None:intergenic | 20.0% |
| !! | TTGTGAATATGTCAAAATAT+TGG | + | chr3.1:63494659-63494678 | MS.gene70661:intron | 20.0% |
| !!! | ACCTTGTTTAATTTTGTTTT+TGG | + | chr3.1:63494492-63494511 | MS.gene70661:intron | 20.0% |
| !!! | ATATATTTTTTTGCTTTGTG+GGG | + | chr3.1:63497855-63497874 | MS.gene70661:intron | 20.0% |
| !!! | ATTATTTTAATTTACTCTCC+AGG | + | chr3.1:63497187-63497206 | MS.gene70661:intron | 20.0% |
| !!! | GAGTGATAACTATATTTTAT+AGG | + | chr3.1:63496966-63496985 | MS.gene70661:intron | 20.0% |
| !!! | TATGTAATGTATTTTAGTCA+TGG | + | chr3.1:63496045-63496064 | MS.gene70661:intron | 20.0% |
| !!! | TCAGTAAAATTTCTTTTTTG+GGG | + | chr3.1:63496424-63496443 | MS.gene70661:intron | 20.0% |
| !!! | TTTGATTTTAGTTAGTGATT+GGG | + | chr3.1:63497350-63497369 | MS.gene70661:intron | 20.0% |
| !!! | TTTTTGAAAATTATACTTGC+TGG | + | chr3.1:63498948-63498967 | MS.gene70661:intron | 20.0% |
| !!! | TTTTTGAAAATTATACTTGC+TGG | - | chr3.1:63498967-63498948 | None:intergenic | 20.0% |
| ! | AAAATCAAACCAGATGAAAA+TGG | - | chr3.1:63497339-63497358 | None:intergenic | 25.0% |
| ! | AAATATACACTACATGAAAC+AGG | + | chr3.1:63499337-63499356 | MS.gene70661:intron | 25.0% |
| ! | AAGAATGTCATAAACTATCT+TGG | - | chr3.1:63494834-63494853 | None:intergenic | 25.0% |
| ! | AAGTAAAAAGAAGTTATGAC+TGG | - | chr3.1:63499073-63499092 | None:intergenic | 25.0% |
| ! | AATAGGGCAAACATATATAT+TGG | + | chr3.1:63498772-63498791 | MS.gene70661:intron | 25.0% |
| ! | AATAGGGCAAACATATATAT+TGG | - | chr3.1:63498791-63498772 | None:intergenic | 25.0% |
| ! | ACATGAGAACAAAAAATCAA+GGG | - | chr3.1:63496786-63496805 | None:intergenic | 25.0% |
| ! | ATAAAAGTGGTAAAATGATG+TGG | - | chr3.1:63499096-63499115 | None:intergenic | 25.0% |
| ! | ATAGTTATACAGTATACATG+TGG | - | chr3.1:63495382-63495401 | None:intergenic | 25.0% |
| ! | ATCAAAAAAACTCTATAGTG+GGG | + | chr3.1:63497638-63497657 | MS.gene70661:intron | 25.0% |
| ! | ATGTTAATGACATTGTTCTT+GGG | + | chr3.1:63494415-63494434 | MS.gene70661:CDS | 25.0% |
| ! | CAAAACTTCCATTAAATTTG+AGG | - | chr3.1:63497936-63497955 | None:intergenic | 25.0% |
| ! | CGGGTTAATATTCTTTATAT+GGG | - | chr3.1:63497890-63497909 | None:intergenic | 25.0% |
| ! | CTAAATGTTCCATTAAATGA+TGG | + | chr3.1:63495738-63495757 | MS.gene70661:CDS | 25.0% |
| ! | CTTATTACTTTCATGCTAAA+TGG | + | chr3.1:63499012-63499031 | MS.gene70661:intron | 25.0% |
| ! | GATCAAAAAAACTCTATAGT+GGG | + | chr3.1:63497637-63497656 | MS.gene70661:intron | 25.0% |
| ! | GATTATCATCTTAACATTTC+TGG | - | chr3.1:63498880-63498899 | None:intergenic | 25.0% |
| ! | GGGTTAATATTCTTTATATG+GGG | - | chr3.1:63497889-63497908 | None:intergenic | 25.0% |
| ! | GGTTAATATTCTTTATATGG+GGG | - | chr3.1:63497888-63497907 | None:intergenic | 25.0% |
| ! | TACATGAGAACAAAAAATCA+AGG | - | chr3.1:63496787-63496806 | None:intergenic | 25.0% |
| ! | TATGTTAATGACATTGTTCT+TGG | + | chr3.1:63494414-63494433 | MS.gene70661:CDS | 25.0% |
| ! | TGCTTCAATTGAAAATTACT+AGG | + | chr3.1:63497133-63497152 | MS.gene70661:intron | 25.0% |
| ! | TGTGACTATAAAATTGTTAG+TGG | + | chr3.1:63494621-63494640 | MS.gene70661:intron | 25.0% |
| ! | TTATATGGCAACTTATTACT+TGG | - | chr3.1:63496146-63496165 | None:intergenic | 25.0% |
| ! | TTTCTTTATAGTGTAGAAGT+AGG | + | chr3.1:63497554-63497573 | MS.gene70661:intron | 25.0% |
| !! | AAATTCCTTTGAGTTTCAAT+AGG | - | chr3.1:63495250-63495269 | None:intergenic | 25.0% |
| !! | AATTCCTTTGAGTTTCAATA+GGG | - | chr3.1:63495249-63495268 | None:intergenic | 25.0% |
| !! | TGTTTTCGTATAAGCTATTA+TGG | - | chr3.1:63495061-63495080 | None:intergenic | 25.0% |
| !!! | AGTGTTTTTTTACTCATTCA+TGG | + | chr3.1:63494551-63494570 | MS.gene70661:intron | 25.0% |
| !!! | CTGCTATTCTAACTTTTTTA+TGG | - | chr3.1:63496883-63496902 | None:intergenic | 25.0% |
| !!! | GTTTGATTTTAGTTAGTGAT+TGG | + | chr3.1:63497349-63497368 | MS.gene70661:intron | 25.0% |
| !!! | TATATTTTTTTGCTTTGTGG+GGG | + | chr3.1:63497856-63497875 | MS.gene70661:intron | 25.0% |
| !!! | TTTTAAGAAAAGGAACCAAA+TGG | - | chr3.1:63499311-63499330 | None:intergenic | 25.0% |
| AAACATGTGCAAATGGAAAA+TGG | + | chr3.1:63496348-63496367 | MS.gene70661:intron | 30.0% | |
| AAATGTTGGATATATAGGAG+AGG | + | chr3.1:63494907-63494926 | MS.gene70661:intron | 30.0% | |
| AAGAAAATGACGAAATACAG+AGG | - | chr3.1:63495277-63495296 | None:intergenic | 30.0% | |
| AATTACAATTGTTAGACGAG+AGG | + | chr3.1:63497715-63497734 | MS.gene70661:intron | 30.0% | |
| AATTCCTTTGAGTGTCAATA+GGG | - | chr3.1:63495197-63495216 | None:intergenic | 30.0% | |
| AATTGTCAAGCTCATGATAT+TGG | + | chr3.1:63498420-63498439 | MS.gene70661:intron | 30.0% | |
| ATAATTCGCACTCTCATTAT+CGG | + | chr3.1:63494205-63494224 | MS.gene70661:CDS | 30.0% | |
| ATGCTGATATTGCTATCAAT+TGG | + | chr3.1:63494343-63494362 | MS.gene70661:CDS | 30.0% | |
| ATGTTAAACAAGCGTGTAAT+AGG | + | chr3.1:63498755-63498774 | MS.gene70661:intron | 30.0% | |
| ATGTTAAACAAGCGTGTAAT+AGG | - | chr3.1:63498774-63498755 | None:intergenic | 30.0% | |
| ATTATGAATGGCCAAAATGT+TGG | + | chr3.1:63494893-63494912 | MS.gene70661:intron | 30.0% | |
| CAACAAGCCTTAATGAATTA+CGG | + | chr3.1:63498806-63498825 | MS.gene70661:intron | 30.0% | |
| CTGATTAGTAAAAATGCACT+TGG | + | chr3.1:63497525-63497544 | MS.gene70661:intron | 30.0% | |
| CTTAGTACTTTCATGCTAAA+TGG | - | chr3.1:63498053-63498072 | None:intergenic | 30.0% | |
| CTTTACCACTGTATTCATTA+AGG | + | chr3.1:63498254-63498273 | MS.gene70661:intron | 30.0% | |
| GCTTATTAGTGGTTATTTAC+TGG | + | chr3.1:63494725-63494744 | MS.gene70661:intron | 30.0% | |
| GGATCAAAAAAACTCTATAG+TGG | + | chr3.1:63497636-63497655 | MS.gene70661:intron | 30.0% | |
| GGCAAACATATATATTGGAT+TGG | + | chr3.1:63498777-63498796 | MS.gene70661:intron | 30.0% | |
| GGCAAACATATATATTGGAT+TGG | - | chr3.1:63498796-63498777 | None:intergenic | 30.0% | |
| GGTTTGTACTTCTTAAACTA+TGG | + | chr3.1:63497299-63497318 | MS.gene70661:intron | 30.0% | |
| GTAAAAGCTTAGATATTGTG+AGG | - | chr3.1:63497694-63497713 | None:intergenic | 30.0% | |
| GTGACTACATAGTTATACAA+AGG | - | chr3.1:63496593-63496612 | None:intergenic | 30.0% | |
| TAAACTTGAGCTCCTTATAT+TGG | - | chr3.1:63497466-63497485 | None:intergenic | 30.0% | |
| TACCAAATTGACTATTACTC+AGG | - | chr3.1:63497005-63497024 | None:intergenic | 30.0% | |
| TACCTGAGTAATAGTCAATT+TGG | + | chr3.1:63497000-63497019 | MS.gene70661:intron | 30.0% | |
| TAGCATGAAAGTAATAAGTG+AGG | - | chr3.1:63499010-63499029 | None:intergenic | 30.0% | |
| TCAAAAAAACTCTATAGTGG+GGG | + | chr3.1:63497639-63497658 | MS.gene70661:intron | 30.0% | |
| TCATCCATTCCATCATTTAA+TGG | - | chr3.1:63495750-63495769 | None:intergenic | 30.0% | |
| TCTTAACAATCATTTGCCTT+CGG | - | chr3.1:63498024-63498043 | None:intergenic | 30.0% | |
| TGACAAAAGGAATGAAACAT+AGG | - | chr3.1:63495426-63495445 | None:intergenic | 30.0% | |
| TGCTGATATTGCTATCAATT+GGG | + | chr3.1:63494344-63494363 | MS.gene70661:CDS | 30.0% | |
| TGTTAAACAAGCGTGTAATA+GGG | + | chr3.1:63498756-63498775 | MS.gene70661:intron | 30.0% | |
| TGTTAAACAAGCGTGTAATA+GGG | - | chr3.1:63498775-63498756 | None:intergenic | 30.0% | |
| TTTACCACCGTAATTCATTA+AGG | - | chr3.1:63498816-63498835 | None:intergenic | 30.0% | |
| ! | AAAACACGCAAGTTTTTCAT+GGG | + | chr3.1:63497762-63497781 | MS.gene70661:intron | 30.0% |
| ! | ATATGTTTTGCGAGATTGTT+TGG | + | chr3.1:63494983-63495002 | MS.gene70661:intron | 30.0% |
| ! | ATCCATGACTTTTTGCATAA+TGG | - | chr3.1:63495799-63495818 | None:intergenic | 30.0% |
| ! | ATTCCTTTGAGTTTCAATAG+GGG | - | chr3.1:63495248-63495267 | None:intergenic | 30.0% |
| ! | CAAGTTTAACTTCTCATATG+AGG | + | chr3.1:63497478-63497497 | MS.gene70661:CDS | 30.0% |
| ! | CTCCTATATATCCAACATTT+TGG | - | chr3.1:63494907-63494926 | None:intergenic | 30.0% |
| ! | GCGGGTTAATATTCTTTATA+TGG | - | chr3.1:63497891-63497910 | None:intergenic | 30.0% |
| ! | TATGTTTTGCGAGATTGTTT+GGG | + | chr3.1:63494984-63495003 | MS.gene70661:intron | 30.0% |
| ! | TCCATGACTTTTTGCATAAT+GGG | - | chr3.1:63495798-63495817 | None:intergenic | 30.0% |
| ! | TGTTCCATTAAATGATGGAA+TGG | + | chr3.1:63495743-63495762 | MS.gene70661:CDS | 30.0% |
| !! | TCTGTATTTCGTCATTTTCT+TGG | + | chr3.1:63495276-63495295 | MS.gene70661:intron | 30.0% |
| !!! | CTGATTTTTTCCATATCCTT+GGG | - | chr3.1:63496242-63496261 | None:intergenic | 30.0% |
| AAACCCTAGGTATATGAAAC+AGG | - | chr3.1:63494949-63494968 | None:intergenic | 35.0% | |
| AAACCTGAAACAACTCTCAT+TGG | + | chr3.1:63498140-63498159 | MS.gene70661:intron | 35.0% | |
| AAACCTGAAACAACTCTCAT+TGG | - | chr3.1:63498159-63498140 | None:intergenic | 35.0% | |
| AACAGTGGTTGTCATGTTAT+TGG | - | chr3.1:63498514-63498533 | None:intergenic | 35.0% | |
| AACCACTGTTCTTTATCCAA+AGG | + | chr3.1:63498524-63498543 | MS.gene70661:intron | 35.0% | |
| AAGATGAGAAGGCCAATATA+AGG | + | chr3.1:63497451-63497470 | MS.gene70661:CDS | 35.0% | |
| AATCATCAGAGTGAAAACGA+CGG | - | chr3.1:63494143-63494162 | None:intergenic | 35.0% | |
| AATGTTCCTCTAATGGTCTT+GGG | + | chr3.1:63495942-63495961 | MS.gene70661:CDS | 35.0% | |
| AATTGTCAAGCTCATGGTAT+TGG | - | chr3.1:63498650-63498669 | None:intergenic | 35.0% | |
| ACAAGCCTTAATGAATACAG+TGG | - | chr3.1:63498262-63498281 | None:intergenic | 35.0% | |
| ACACCAAAATTACTGTCCAA+GGG | - | chr3.1:63497613-63497632 | None:intergenic | 35.0% | |
| ACTGCCTAAATGCAAATCTA+GGG | - | chr3.1:63494589-63494608 | None:intergenic | 35.0% | |
| AGATTGTTTGGGAGAACTTA+CGG | + | chr3.1:63494995-63495014 | MS.gene70661:intron | 35.0% | |
| ATAAGTGTCTGTGCTATAAG+CGG | + | chr3.1:63495140-63495159 | MS.gene70661:intron | 35.0% | |
| ATAATCTTACACCCCCTTTA+AGG | + | chr3.1:63498894-63498913 | MS.gene70661:intron | 35.0% | |
| ATAGTTATGGATTTGTCCCT+TGG | + | chr3.1:63497594-63497613 | MS.gene70661:intron | 35.0% | |
| ATTCCTTTGAGTGTCAATAG+GGG | - | chr3.1:63495196-63495215 | None:intergenic | 35.0% | |
| CAACATGAAGTGTATAGTCT+GGG | - | chr3.1:63496190-63496209 | None:intergenic | 35.0% | |
| CAGTTGAAGAGGTTTAATGT+TGG | + | chr3.1:63494228-63494247 | MS.gene70661:CDS | 35.0% | |
| CATATTAAAGACACTGGTGT+GGG | + | chr3.1:63495696-63495715 | MS.gene70661:CDS | 35.0% | |
| CCAAGGATATGGAAAAAATC+AGG | + | chr3.1:63496240-63496259 | MS.gene70661:CDS | 35.0% | |
| GAATTATCCGAAACAATCTC+CGG | - | chr3.1:63494192-63494211 | None:intergenic | 35.0% | |
| GAATTCCTTTGAGTGTCAAT+AGG | - | chr3.1:63495198-63495217 | None:intergenic | 35.0% | |
| GACCTTGTTCACTATGTTAT+TGG | + | chr3.1:63495546-63495565 | MS.gene70661:intron | 35.0% | |
| GAGACTACCCTCAAATTTAA+TGG | + | chr3.1:63497925-63497944 | MS.gene70661:intron | 35.0% | |
| GGCCAAAATGTTGGATATAT+AGG | + | chr3.1:63494902-63494921 | MS.gene70661:intron | 35.0% | |
| GTCTTTCAATGTTCCTCTAA+TGG | + | chr3.1:63495935-63495954 | MS.gene70661:CDS | 35.0% | |
| GTTATACAGTATACATGTGG+CGG | - | chr3.1:63495379-63495398 | None:intergenic | 35.0% | |
| GTTTATGACATTCTTGAACG+TGG | + | chr3.1:63494839-63494858 | MS.gene70661:intron | 35.0% | |
| TAACACAATTGTCAAGCTCA+TGG | - | chr3.1:63498433-63498414 | None:intergenic | 35.0% | |
| TACTGCCTAAATGCAAATCT+AGG | - | chr3.1:63494590-63494609 | None:intergenic | 35.0% | |
| TAGTAATAATCACCGATGCT+TGG | - | chr3.1:63494000-63494019 | None:intergenic | 35.0% | |
| TAGTTATCACTCCTAGATAG+TGG | - | chr3.1:63496958-63496977 | None:intergenic | 35.0% | |
| TCAAACCAGATGAAAATGGA+AGG | - | chr3.1:63497335-63497354 | None:intergenic | 35.0% | |
| TCAACATGAAGTGTATAGTC+TGG | - | chr3.1:63496191-63496210 | None:intergenic | 35.0% | |
| TCATGTTGAACCAAACAACA+TGG | + | chr3.1:63496202-63496221 | MS.gene70661:CDS | 35.0% | |
| TCCCATTATGCAAAAAGTCA+TGG | + | chr3.1:63495794-63495813 | MS.gene70661:CDS | 35.0% | |
| TGAGCTTCTCAAAGTTCATA+GGG | + | chr3.1:63494443-63494462 | MS.gene70661:CDS | 35.0% | |
| TGCAGATTGATTAACACAGA+TGG | - | chr3.1:63497990-63498009 | None:intergenic | 35.0% | |
| TGCTTCAACTTATCTGTGAA+GGG | + | chr3.1:63495885-63495904 | MS.gene70661:CDS | 35.0% | |
| TTATACAGTATACATGTGGC+GGG | - | chr3.1:63495378-63495397 | None:intergenic | 35.0% | |
| TTGAGCTTCTCAAAGTTCAT+AGG | + | chr3.1:63494442-63494461 | MS.gene70661:CDS | 35.0% | |
| TTGCTTCAACTTATCTGTGA+AGG | + | chr3.1:63495884-63495903 | MS.gene70661:CDS | 35.0% | |
| TTTAGTTAGTGATTGGGTTC+AGG | + | chr3.1:63497356-63497375 | MS.gene70661:intron | 35.0% | |
| ! | AAACACGCAAGTTTTTCATG+GGG | + | chr3.1:63497763-63497782 | MS.gene70661:intron | 35.0% |
| ! | AAGAAGTACAAACCTCTTCT+GGG | - | chr3.1:63497293-63497312 | None:intergenic | 35.0% |
| ! | ACGGTGTCTTTTCATAAGTT+TGG | + | chr3.1:63495651-63495670 | MS.gene70661:CDS | 35.0% |
| ! | GAAAACACGCAAGTTTTTCA+TGG | + | chr3.1:63497761-63497780 | MS.gene70661:intron | 35.0% |
| ! | GAAAATTACTAGGACTTGCT+TGG | + | chr3.1:63497143-63497162 | MS.gene70661:intron | 35.0% |
| ! | GGCTGTCTAAAACAAAGAAA+AGG | - | chr3.1:63496105-63496124 | None:intergenic | 35.0% |
| ! | GTAATAGTCAATTTGGTAGC+TGG | + | chr3.1:63497007-63497026 | MS.gene70661:intron | 35.0% |
| ! | TAAGAAGTACAAACCTCTTC+TGG | - | chr3.1:63497294-63497313 | None:intergenic | 35.0% |
| ! | TCATATACCTAGGGTTTGTT+TGG | + | chr3.1:63494952-63494971 | MS.gene70661:intron | 35.0% |
| ! | TTTAGGTTCTCCATGTTGTT+TGG | - | chr3.1:63496215-63496234 | None:intergenic | 35.0% |
| !! | AGCATCGGTGATTATTACTA+CGG | + | chr3.1:63494000-63494019 | MS.gene70661:CDS | 35.0% |
| !! | TAGCATGAAAGTACTAAGTG+AGG | + | chr3.1:63498055-63498074 | MS.gene70661:intron | 35.0% |
| !! | TGTTTGGATTGGCTTATTAG+TGG | + | chr3.1:63494714-63494733 | MS.gene70661:intron | 35.0% |
| !!! | CCTGATTTTTTCCATATCCT+TGG | - | chr3.1:63496243-63496262 | None:intergenic | 35.0% |
| AAGAGATGTGACTCATACCT+GGG | + | chr3.1:63494688-63494707 | MS.gene70661:intron | 40.0% | |
| ACTGCGAAAACATGTGCAAA+TGG | + | chr3.1:63496341-63496360 | MS.gene70661:intron | 40.0% | |
| ACTGGGCATATTAAAGACAC+TGG | + | chr3.1:63495690-63495709 | MS.gene70661:CDS | 40.0% | |
| AGAATCTTACACCCCCTTTA+AGG | - | chr3.1:63498177-63498196 | None:intergenic | 40.0% | |
| AGGCCTGTTTCATATACCTA+GGG | + | chr3.1:63494943-63494962 | MS.gene70661:intron | 40.0% | |
| AGGTATATGAAACAGGCCTA+AGG | - | chr3.1:63494942-63494961 | None:intergenic | 40.0% | |
| AGTCAATCCAAACAAACCCT+AGG | - | chr3.1:63494962-63494981 | None:intergenic | 40.0% | |
| CAAAGGCAAATGATTGTCAG+TGG | + | chr3.1:63498541-63498560 | MS.gene70661:intron | 40.0% | |
| CAAGCCTTAATGAATTACGG+TGG | + | chr3.1:63498809-63498828 | MS.gene70661:intron | 40.0% | |
| CAATGTTCCTCTAATGGTCT+TGG | + | chr3.1:63495941-63495960 | MS.gene70661:CDS | 40.0% | |
| CACACCAAAATTACTGTCCA+AGG | - | chr3.1:63497614-63497633 | None:intergenic | 40.0% | |
| CACTGACAATCATTTGCCTT+TGG | - | chr3.1:63498543-63498562 | None:intergenic | 40.0% | |
| CATTGAAGAACAACTGCATC+AGG | - | chr3.1:63495831-63495850 | None:intergenic | 40.0% | |
| CCGACTTCAAAAATGTCTCA+GGG | - | chr3.1:63496925-63496944 | None:intergenic | 40.0% | |
| CGACTTCAAAAATGTCTCAG+GGG | - | chr3.1:63496924-63496943 | None:intergenic | 40.0% | |
| CTGCAACTTTCTTTATCCGA+AGG | + | chr3.1:63498005-63498024 | MS.gene70661:intron | 40.0% | |
| CTGCACAAGTAGAGAAAGAA+AGG | - | chr3.1:63496020-63496039 | None:intergenic | 40.0% | |
| CTTTAATATGCCCAGTTCCA+GGG | - | chr3.1:63495686-63495705 | None:intergenic | 40.0% | |
| CTTTCCTAACTCCTTAAAGG+GGG | + | chr3.1:63498163-63498182 | MS.gene70661:intron | 40.0% | |
| CTTTCCTAACTCCTTAAAGG+GGG | - | chr3.1:63498182-63498163 | None:intergenic | 40.0% | |
| CTTTCTTTCTCTACTTGTGC+AGG | + | chr3.1:63496018-63496037 | MS.gene70661:intron | 40.0% | |
| GAAGAGGTTTAATGTTGGTG+AGG | + | chr3.1:63494233-63494252 | MS.gene70661:CDS | 40.0% | |
| GAGGAACATTGAAAGACCTA+AGG | - | chr3.1:63495932-63495951 | None:intergenic | 40.0% | |
| GATATTGCTATCAATTGGGC+TGG | + | chr3.1:63494348-63494367 | MS.gene70661:CDS | 40.0% | |
| GATGCAGTTGTTCTTCAATG+TGG | + | chr3.1:63495831-63495850 | MS.gene70661:CDS | 40.0% | |
| GCATATTAAAGACACTGGTG+TGG | + | chr3.1:63495695-63495714 | MS.gene70661:CDS | 40.0% | |
| GCTTACAAAAGCCTCATTAC+TGG | + | chr3.1:63498442-63498461 | MS.gene70661:intron | 40.0% | |
| GCTTACAAAAGCCTCATTAC+TGG | - | chr3.1:63498461-63498442 | None:intergenic | 40.0% | |
| GCTTTCCTAACTCCTTAAAG+GGG | + | chr3.1:63498162-63498181 | MS.gene70661:intron | 40.0% | |
| GCTTTCCTAACTCCTTAAAG+GGG | - | chr3.1:63498181-63498162 | None:intergenic | 40.0% | |
| GGCCAATAACATAGTGAACA+AGG | - | chr3.1:63495551-63495570 | None:intergenic | 40.0% | |
| GGCTTTCCTAACTCCTTAAA+GGG | + | chr3.1:63498161-63498180 | MS.gene70661:intron | 40.0% | |
| GGCTTTCCTAACTCCTTAAA+GGG | - | chr3.1:63498180-63498161 | None:intergenic | 40.0% | |
| GGTGATTATTACTACGGTCA+AGG | + | chr3.1:63494006-63494025 | MS.gene70661:CDS | 40.0% | |
| GTCAGTGGTTGTCATGTTAT+TGG | + | chr3.1:63498556-63498575 | MS.gene70661:intron | 40.0% | |
| GTGTAGAAGTAGGTTAGTAG+CGG | + | chr3.1:63497564-63497583 | MS.gene70661:intron | 40.0% | |
| GTTGATATTGATGTCCACCA+CGG | + | chr3.1:63495585-63495604 | MS.gene70661:CDS | 40.0% | |
| TAAGACCAAAACGTCAGTTG+TGG | + | chr3.1:63497397-63497416 | MS.gene70661:CDS | 40.0% | |
| TAAGAGATGTGACTCATACC+TGG | + | chr3.1:63494687-63494706 | MS.gene70661:intron | 40.0% | |
| TACTTCTACGAACCAAGCAT+CGG | + | chr3.1:63493985-63494004 | MS.gene70661:CDS | 40.0% | |
| TAGCGGTAGATGCATAGTTA+TGG | + | chr3.1:63497581-63497600 | MS.gene70661:intron | 40.0% | |
| TAGGCCTGTTTCATATACCT+AGG | + | chr3.1:63494942-63494961 | MS.gene70661:intron | 40.0% | |
| TCTTTAATATGCCCAGTTCC+AGG | - | chr3.1:63495687-63495706 | None:intergenic | 40.0% | |
| TGAAAACGACGGATATCTTC+CGG | - | chr3.1:63494132-63494151 | None:intergenic | 40.0% | |
| TGAAAGACCTAAGGAAACGA+AGG | - | chr3.1:63495923-63495942 | None:intergenic | 40.0% | |
| TGAGGGTTAATCCAGTAATG+AGG | + | chr3.1:63498614-63498633 | MS.gene70661:intron | 40.0% | |
| TGAGGGTTAATCCAGTAATG+AGG | - | chr3.1:63498633-63498614 | None:intergenic | 40.0% | |
| TGCCTTTGGATAAAGAACAG+TGG | - | chr3.1:63498529-63498548 | None:intergenic | 40.0% | |
| TGGCTTTCCTAACTCCTTAA+AGG | + | chr3.1:63498160-63498179 | MS.gene70661:intron | 40.0% | |
| TGGCTTTCCTAACTCCTTAA+AGG | - | chr3.1:63498179-63498160 | None:intergenic | 40.0% | |
| TGTCCCCTATTGAAACTCAA+AGG | + | chr3.1:63495242-63495261 | MS.gene70661:intron | 40.0% | |
| TGTGCCCTAGATTTGCATTT+AGG | + | chr3.1:63494582-63494601 | MS.gene70661:intron | 40.0% | |
| TTGGATTCGATCAAGATCAC+TGG | + | chr3.1:63495295-63495314 | MS.gene70661:intron | 40.0% | |
| TTGGCCATTCATAATCGATG+CGG | - | chr3.1:63494888-63494907 | None:intergenic | 40.0% | |
| ! | AAATGTCTCATTGACTAGCC+AGG | - | chr3.1:63497081-63497100 | None:intergenic | 40.0% |
| ! | AAGCCAATGAGAGTTGTTTC+AGG | + | chr3.1:63498925-63498944 | MS.gene70661:intron | 40.0% |
| ! | AAGCCAATGAGAGTTGTTTC+AGG | - | chr3.1:63498944-63498925 | None:intergenic | 40.0% |
| ! | AAGTTTGGTGATTTCTTCCC+TGG | + | chr3.1:63495666-63495685 | MS.gene70661:CDS | 40.0% |
| ! | AATGTCTCATTGACTAGCCA+GGG | - | chr3.1:63497080-63497099 | None:intergenic | 40.0% |
| ! | AATTACGGTGGTAAAGTGCT+AGG | + | chr3.1:63498821-63498840 | MS.gene70661:intron | 40.0% |
| ! | AATTACTAGGACTTGCTTGG+AGG | + | chr3.1:63497146-63497165 | MS.gene70661:intron | 40.0% |
| ! | ACTGTCCTTCCATTTTCATC+TGG | + | chr3.1:63497327-63497346 | MS.gene70661:intron | 40.0% |
| ! | GAATACAGTGGTAAAGTGCT+AGG | - | chr3.1:63498250-63498269 | None:intergenic | 40.0% |
| ! | TGCCATGTCTGTGTGTTTTA+GGG | + | chr3.1:63496529-63496548 | MS.gene70661:intron | 40.0% |
| ! | TGTCCCTTGGACAGTAATTT+TGG | + | chr3.1:63497607-63497626 | MS.gene70661:intron | 40.0% |
| ! | TTGTTCAAGCAAAGTGTTCC+TGG | - | chr3.1:63497208-63497227 | None:intergenic | 40.0% |
| !! | ATGGTAACTTTTTCTCGCAG+AGG | - | chr3.1:63496484-63496503 | None:intergenic | 40.0% |
| !! | ATTGGCCTTCTCATCTTCAT+CGG | - | chr3.1:63497448-63497467 | None:intergenic | 40.0% |
| !! | CTTGGACAGTAATTTTGGTG+TGG | + | chr3.1:63497612-63497631 | MS.gene70661:intron | 40.0% |
| !! | GACGGTTAATTTGCATACGA+CGG | - | chr3.1:63494095-63494114 | None:intergenic | 40.0% |
| !! | GTTGATGGTGTTGTCTGAAA+AGG | - | chr3.1:63497261-63497280 | None:intergenic | 40.0% |
| !! | TAGTCCGCATCGATTATGAA+TGG | + | chr3.1:63494881-63494900 | MS.gene70661:intron | 40.0% |
| !!! | CCCTGAGACATTTTTGAAGT+CGG | + | chr3.1:63496922-63496941 | MS.gene70661:intron | 40.0% |
| ACACAGATGGCTAAGCATAG+AGG | - | chr3.1:63497977-63497996 | None:intergenic | 45.0% | |
| AGAGATGTGACTCATACCTG+GGG | + | chr3.1:63494689-63494708 | MS.gene70661:intron | 45.0% | |
| CACTACTGATCGAGTGATGA+CGG | + | chr3.1:63495632-63495651 | MS.gene70661:CDS | 45.0% | |
| CACTAGTGTGATATAGCAGC+TGG | + | chr3.1:63496610-63496629 | MS.gene70661:intron | 45.0% | |
| CCATATCCTTGGGTGTGTTT+AGG | - | chr3.1:63496232-63496251 | None:intergenic | 45.0% | |
| CCTAAACACACCCAAGGATA+TGG | + | chr3.1:63496229-63496248 | MS.gene70661:CDS | 45.0% | |
| CGGTGGTTAAATACCAACCA+GGG | - | chr3.1:63496317-63496336 | None:intergenic | 45.0% | |
| CTCATTATCGGCAGTTGAAG+AGG | + | chr3.1:63494217-63494236 | MS.gene70661:CDS | 45.0% | |
| GAGCATTTAGCAGCTGCATA+CGG | - | chr3.1:63496698-63496717 | None:intergenic | 45.0% | |
| GATAAGCCAGAAGTTAAGCC+TGG | + | chr3.1:63499384-63499403 | MS.gene70661:CDS | 45.0% | |
| GATTAACCCTCAAGCAAGCA+GGG | + | chr3.1:63498464-63498483 | MS.gene70661:intron | 45.0% | |
| GATTAACCCTCAAGCAAGCA+GGG | - | chr3.1:63498483-63498464 | None:intergenic | 45.0% | |
| GCAGAAGACATAACATGCGA+TGG | - | chr3.1:63496503-63496522 | None:intergenic | 45.0% | |
| GCTAAGAAAGCTGAAGCTTC+TGG | + | chr3.1:63494384-63494403 | MS.gene70661:CDS | 45.0% | |
| GGATACGATGGGGTTTCATT+GGG | - | chr3.1:63494035-63494054 | None:intergenic | 45.0% | |
| GTCTCCAGTCTACATAGTAG+CGG | - | chr3.1:63497910-63497929 | None:intergenic | 45.0% | |
| GTGATTTCTTCCCTGGAACT+GGG | + | chr3.1:63495673-63495692 | MS.gene70661:CDS | 45.0% | |
| GTTAAATACCAACCAGGGCA+CGG | - | chr3.1:63496312-63496331 | None:intergenic | 45.0% | |
| TAACCCGCTACTATGTAGAC+TGG | + | chr3.1:63497903-63497922 | MS.gene70661:intron | 45.0% | |
| TAATGGGACGAAACAGAGCA+CGG | - | chr3.1:63495782-63495801 | None:intergenic | 45.0% | |
| TAGTGTGATATAGCAGCTGG+TGG | + | chr3.1:63496613-63496632 | MS.gene70661:intron | 45.0% | |
| TATCAACATACAGCACACGC+TGG | - | chr3.1:63495572-63495591 | None:intergenic | 45.0% | |
| TCTCCAGTCTACATAGTAGC+GGG | - | chr3.1:63497909-63497928 | None:intergenic | 45.0% | |
| TGATCCCGATGAAGATGAGA+AGG | + | chr3.1:63497440-63497459 | MS.gene70661:CDS | 45.0% | |
| TGATGAGATTGTGTGCCATG+CGG | - | chr3.1:63494056-63494075 | None:intergenic | 45.0% | |
| TGATTGGGTTCAGGAAGAAG+AGG | + | chr3.1:63497365-63497384 | MS.gene70661:intron | 45.0% | |
| TGTCCCCTATTGACACTCAA+AGG | + | chr3.1:63495190-63495209 | MS.gene70661:intron | 45.0% | |
| TTAGAGCATAGTCCTTCCCA+GGG | - | chr3.1:63495722-63495741 | None:intergenic | 45.0% | |
| ! | ACAGTGGTAAAGTGCTAGGA+GGG | - | chr3.1:63498246-63498265 | None:intergenic | 45.0% |
| ! | ACTCATACCTGGGGTTTGTT+TGG | + | chr3.1:63494698-63494717 | MS.gene70661:intron | 45.0% |
| ! | AGGATTGTCCTGTTTTCGAC+GGG | + | chr3.1:63494253-63494272 | MS.gene70661:CDS | 45.0% |
| ! | ATTGCTATCAATTGGGCTGG+TGG | + | chr3.1:63494351-63494370 | MS.gene70661:CDS | 45.0% |
| ! | GAGGATTGTCCTGTTTTCGA+CGG | + | chr3.1:63494252-63494271 | MS.gene70661:CDS | 45.0% |
| ! | GATGCTTGGTTCGTAGAAGT+AGG | - | chr3.1:63493986-63494005 | None:intergenic | 45.0% |
| ! | GCCGACTTCAAAAATGTCTC+AGG | - | chr3.1:63496926-63496945 | None:intergenic | 45.0% |
| ! | GTGCCATGTCTGTGTGTTTT+AGG | + | chr3.1:63496528-63496547 | MS.gene70661:intron | 45.0% |
| ! | GTTAGGGACAAAAGGTGCAA+TGG | - | chr3.1:63496453-63496472 | None:intergenic | 45.0% |
| ! | TACACCCCCTTTAAGGAGTT+AGG | + | chr3.1:63498901-63498920 | MS.gene70661:intron | 45.0% |
| ! | TACACCCCCTTTAAGGAGTT+AGG | - | chr3.1:63498920-63498901 | None:intergenic | 45.0% |
| ! | TACAGTGGTAAAGTGCTAGG+AGG | - | chr3.1:63498247-63498266 | None:intergenic | 45.0% |
| ! | TACCTGGGGTTTGTTTGGAT+TGG | + | chr3.1:63494703-63494722 | MS.gene70661:intron | 45.0% |
| ! | TGGTTGGTATTTAACCACCG+CGG | + | chr3.1:63496317-63496336 | MS.gene70661:intron | 45.0% |
| ! | TGTTGTCTGAAAAGGAGCAC+TGG | - | chr3.1:63497253-63497272 | None:intergenic | 45.0% |
| ! | TTCCTCTAATGGTCTTGGGT+GGG | + | chr3.1:63495946-63495965 | MS.gene70661:CDS | 45.0% |
| ! | TTGGCCTTCTCATCTTCATC+GGG | - | chr3.1:63497447-63497466 | None:intergenic | 45.0% |
| ! | TTTAGAGCATAGTCCTTCCC+AGG | - | chr3.1:63495723-63495742 | None:intergenic | 45.0% |
| ! | TTTTAGACAGCCGTAGCAGT+AGG | + | chr3.1:63496113-63496132 | MS.gene70661:intron | 45.0% |
| !! | CCATGTCTGTGTGTTTTAGG+GGG | + | chr3.1:63496531-63496550 | MS.gene70661:intron | 45.0% |
| !! | GATCTATTGGTGCTGCTGTT+AGG | + | chr3.1:63494307-63494326 | MS.gene70661:CDS | 45.0% |
| !! | GCCATGTCTGTGTGTTTTAG+GGG | + | chr3.1:63496530-63496549 | MS.gene70661:intron | 45.0% |
| !! | GGACAGTAATTTTGGTGTGG+TGG | + | chr3.1:63497615-63497634 | MS.gene70661:intron | 45.0% |
| !! | GGTTAATTTGCATACGACGG+TGG | - | chr3.1:63494092-63494111 | None:intergenic | 45.0% |
| !! | GTAACTTTTTCTCGCAGAGG+TGG | - | chr3.1:63496481-63496500 | None:intergenic | 45.0% |
| !! | GTTGTCTGAAAAGGAGCACT+GGG | - | chr3.1:63497252-63497271 | None:intergenic | 45.0% |
| !! | TGGAGCTTGTTAGGGACAAA+AGG | - | chr3.1:63496461-63496480 | None:intergenic | 45.0% |
| !! | TTGCTATCAATTGGGCTGGT+GGG | + | chr3.1:63494352-63494371 | MS.gene70661:CDS | 45.0% |
| AACTGCAGAAGTCCCAGAAG+AGG | + | chr3.1:63497278-63497297 | MS.gene70661:CDS | 50.0% | |
| AATTGATCGATACCGTGCCC+TGG | + | chr3.1:63496297-63496316 | MS.gene70661:intron | 50.0% | |
| AGACGTAGCTCCTGCAATAG+TGG | + | chr3.1:63496660-63496679 | MS.gene70661:intron | 50.0% | |
| AGCCAATCCAAACAAACCCC+AGG | - | chr3.1:63494708-63494727 | None:intergenic | 50.0% | |
| ATGCAGCTGCTAAATGCTCC+AGG | + | chr3.1:63496699-63496718 | MS.gene70661:intron | 50.0% | |
| ATTGATGTCCACCACGGAGA+TGG | + | chr3.1:63495591-63495610 | MS.gene70661:CDS | 50.0% | |
| CAGACTGCCTTCGTTTCCTT+AGG | + | chr3.1:63495913-63495932 | MS.gene70661:CDS | 50.0% | |
| CCAAAACGTCAGTTGTGGAG+TGG | + | chr3.1:63497402-63497421 | MS.gene70661:CDS | 50.0% | |
| CCCCCTAAAACACACAGACA+TGG | - | chr3.1:63496534-63496553 | None:intergenic | 50.0% | |
| CGAAACAATCTCCGGCGAAA+CGG | - | chr3.1:63494184-63494203 | None:intergenic | 50.0% | |
| CGGATACGATGGGGTTTCAT+TGG | - | chr3.1:63494036-63494055 | None:intergenic | 50.0% | |
| CGTTTCGCCGGAGATTGTTT+CGG | + | chr3.1:63494182-63494201 | MS.gene70661:CDS | 50.0% | |
| CTACAGCATACTTCCGATGG+TGG | - | chr3.1:63496639-63496658 | None:intergenic | 50.0% | |
| CTGCTACAGCATACTTCCGA+TGG | - | chr3.1:63496642-63496661 | None:intergenic | 50.0% | |
| GCGGTGGTTAAATACCAACC+AGG | - | chr3.1:63496318-63496337 | None:intergenic | 50.0% | |
| GGAAAAAGCCCGTCGAAAAC+AGG | - | chr3.1:63494264-63494283 | None:intergenic | 50.0% | |
| GGAGAACCTAAACACACCCA+AGG | + | chr3.1:63496223-63496242 | MS.gene70661:CDS | 50.0% | |
| GGAGAGGTGACTCATACCTT+AGG | + | chr3.1:63494923-63494942 | MS.gene70661:intron | 50.0% | |
| GGATTAACCCTCAAGCAAGC+AGG | + | chr3.1:63498463-63498482 | MS.gene70661:intron | 50.0% | |
| GGATTAACCCTCAAGCAAGC+AGG | - | chr3.1:63498482-63498463 | None:intergenic | 50.0% | |
| GGCGCATCACTTCCTTCAAT+CGG | + | chr3.1:63493934-63493953 | MS.gene70661:CDS | 50.0% | |
| GGTGATTTCTTCCCTGGAAC+TGG | + | chr3.1:63495672-63495691 | MS.gene70661:CDS | 50.0% | |
| GGTTCAGGAAGAAGAGGACA+TGG | + | chr3.1:63497371-63497390 | MS.gene70661:intron | 50.0% | |
| GTTTCTCTCTACCGTTTCGC+CGG | + | chr3.1:63494170-63494189 | MS.gene70661:CDS | 50.0% | |
| TACGGAATGTTGCTCGCTGT+TGG | + | chr3.1:63495982-63496001 | MS.gene70661:CDS | 50.0% | |
| TGCACACCAGGCTTAACTTC+TGG | - | chr3.1:63499393-63499412 | None:intergenic | 50.0% | |
| ! | ACGGTGGTAAAGTGCTAGGA+GGG | + | chr3.1:63498825-63498844 | MS.gene70661:intron | 50.0% |
| ! | CCACTCCACAACTGACGTTT+TGG | - | chr3.1:63497405-63497424 | None:intergenic | 50.0% |
| ! | GCTGCTTTGTGCCACTATCT+AGG | + | chr3.1:63496944-63496963 | MS.gene70661:intron | 50.0% |
| ! | GCTTCTGCTGGTGGATCTAT+TGG | + | chr3.1:63494294-63494313 | MS.gene70661:CDS | 50.0% |
| ! | GTTCCTCTAATGGTCTTGGG+TGG | + | chr3.1:63495945-63495964 | MS.gene70661:CDS | 50.0% |
| ! | TACGGTGGTAAAGTGCTAGG+AGG | + | chr3.1:63498824-63498843 | MS.gene70661:intron | 50.0% |
| ! | TCCTCTAATGGTCTTGGGTG+GGG | + | chr3.1:63495947-63495966 | MS.gene70661:CDS | 50.0% |
| ! | TCTCATTGACTAGCCAGGGA+GGG | - | chr3.1:63497076-63497095 | None:intergenic | 50.0% |
| ! | TCTGGGACTTCTGCAGTTGA+TGG | - | chr3.1:63497276-63497295 | None:intergenic | 50.0% |
| ! | TGTGGAGCTGATTCTCTGTC+CGG | + | chr3.1:63495849-63495868 | MS.gene70661:CDS | 50.0% |
| !! | GGGTTGGCTATACTGCATAG+TGG | + | chr3.1:63496551-63496570 | MS.gene70661:intron | 50.0% |
| !!! | GTCTGTGTGTTTTAGGGGGT+TGG | + | chr3.1:63496535-63496554 | MS.gene70661:intron | 50.0% |
| AGCTACAAATCCTCCCTCCC+TGG | + | chr3.1:63497060-63497079 | MS.gene70661:intron | 55.0% | |
| CTGATTCTCTGTCCGGTGAC+AGG | + | chr3.1:63495856-63495875 | MS.gene70661:CDS | 55.0% | |
| GAAACCCCATCGTATCCGCA+TGG | + | chr3.1:63494038-63494057 | MS.gene70661:CDS | 55.0% | |
| GAGCTTCCCTGCTTGCTTGA+GGG | + | chr3.1:63498597-63498616 | MS.gene70661:intron | 55.0% | |
| GCGATCATGGCCACTATTGC+AGG | - | chr3.1:63496673-63496692 | None:intergenic | 55.0% | |
| GCTGCTGTTAGGCTCAATCG+TGG | + | chr3.1:63494318-63494337 | MS.gene70661:CDS | 55.0% | |
| GTGGGGGAGGATACACTGTA+CGG | + | chr3.1:63495964-63495983 | MS.gene70661:CDS | 55.0% | |
| GTGTGCCATGCGGATACGAT+GGG | - | chr3.1:63494046-63494065 | None:intergenic | 55.0% | |
| TACGACGGTGGAGAGAGTAG+TGG | - | chr3.1:63494080-63494099 | None:intergenic | 55.0% | |
| TACGCGACGCTTCATTGCGT+CGG | - | chr3.1:63493962-63493981 | None:intergenic | 55.0% | |
| TAGATCCACCAGCAGAAGCC+TGG | - | chr3.1:63494293-63494312 | None:intergenic | 55.0% | |
| TGAGCTTCCCTGCTTGCTTG+AGG | + | chr3.1:63498596-63498615 | MS.gene70661:intron | 55.0% | |
| TGGCTCCACTCCTACTGCTA+CGG | - | chr3.1:63496126-63496145 | None:intergenic | 55.0% | |
| TGTGCCATGCGGATACGATG+GGG | - | chr3.1:63494045-63494064 | None:intergenic | 55.0% | |
| TGTGTGCCATGCGGATACGA+TGG | - | chr3.1:63494047-63494066 | None:intergenic | 55.0% | |
| ! | ACTGGGAGCATGAGGAAGTC+TGG | - | chr3.1:63497235-63497254 | None:intergenic | 55.0% |
| ! | CACATGTTTTCGCAGTGCCG+CGG | - | chr3.1:63496337-63496356 | None:intergenic | 55.0% |
| ! | CCTCTAATGGTCTTGGGTGG+GGG | + | chr3.1:63495948-63495967 | MS.gene70661:CDS | 55.0% |
| ! | GTCTCATTGACTAGCCAGGG+AGG | - | chr3.1:63497077-63497096 | None:intergenic | 55.0% |
| ! | TCGCAGAGGTGGAGCTTGTT+AGG | - | chr3.1:63496470-63496489 | None:intergenic | 55.0% |
| ! | TCTCAGGGGAAGCGCATAAC+AGG | - | chr3.1:63496910-63496929 | None:intergenic | 55.0% |
| !! | AAAGGAGCACTGGGAGCATG+AGG | - | chr3.1:63497243-63497262 | None:intergenic | 55.0% |
| !! | CGCAGAGGTGGAGCTTGTTA+GGG | - | chr3.1:63496469-63496488 | None:intergenic | 55.0% |
| !! | TGCTCGCTGTTGGTGTTACG+AGG | + | chr3.1:63495992-63496011 | MS.gene70661:CDS | 55.0% |
| AAAGACACTGGTGTGGGCCC+TGG | + | chr3.1:63495702-63495721 | MS.gene70661:CDS | 60.0% | |
| AAGACACTGGTGTGGGCCCT+GGG | + | chr3.1:63495703-63495722 | MS.gene70661:CDS | 60.0% | |
| ACGGATATCTTCCGGCGCAG+CGG | - | chr3.1:63494124-63494143 | None:intergenic | 60.0% | |
| ATGGGTGTAGCTGAGAGCGG+TGG | + | chr3.1:63493913-63493932 | MS.gene70661:CDS | 60.0% | |
| CAGGCGCGCAGCAGATATGA+TGG | + | chr3.1:63499356-63499375 | MS.gene70661:intron | 60.0% | |
| CCAATCACCGTGGGGACTTG+GGG | + | chr3.1:63497033-63497052 | MS.gene70661:intron | 60.0% | |
| CCAGCAGAAGCCTGGCAGAA+CGG | - | chr3.1:63494285-63494304 | None:intergenic | 60.0% | |
| CCCAAGTCCCCACGGTGATT+GGG | - | chr3.1:63497035-63497054 | None:intergenic | 60.0% | |
| CCCAATCACCGTGGGGACTT+GGG | + | chr3.1:63497032-63497051 | MS.gene70661:intron | 60.0% | |
| CCCCCACCCAAGACCATTAG+AGG | - | chr3.1:63495951-63495970 | None:intergenic | 60.0% | |
| GAAGCAACCCAGCCTGTCAC+CGG | - | chr3.1:63495871-63495890 | None:intergenic | 60.0% | |
| GACAGCCGTAGCAGTAGGAG+TGG | + | chr3.1:63496118-63496137 | MS.gene70661:intron | 60.0% | |
| GAGCTGCCCTGCTTGCTTGA+GGG | - | chr3.1:63498473-63498492 | None:intergenic | 60.0% | |
| GATCGATACCGTGCCCTGGT+TGG | + | chr3.1:63496301-63496320 | MS.gene70661:intron | 60.0% | |
| GCGCGCAGCAGATATGATGG+AGG | + | chr3.1:63499359-63499378 | MS.gene70661:CDS | 60.0% | |
| GCTGCATACGGCTGCGATCA+TGG | - | chr3.1:63496686-63496705 | None:intergenic | 60.0% | |
| TAGCAGCTGGTGGCCACCAT+CGG | + | chr3.1:63496623-63496642 | MS.gene70661:intron | 60.0% | |
| TCCCAATCACCGTGGGGACT+TGG | + | chr3.1:63497031-63497050 | MS.gene70661:intron | 60.0% | |
| TCTCTGTCCGGTGACAGGCT+GGG | + | chr3.1:63495861-63495880 | MS.gene70661:CDS | 60.0% | |
| TGAGCTGCCCTGCTTGCTTG+AGG | - | chr3.1:63498474-63498493 | None:intergenic | 60.0% | |
| TTCTCTGTCCGGTGACAGGC+TGG | + | chr3.1:63495860-63495879 | MS.gene70661:CDS | 60.0% | |
| TTCTGCCAGGCTTCTGCTGG+TGG | + | chr3.1:63494285-63494304 | MS.gene70661:CDS | 60.0% | |
| ! | AGCTGGCTCCCAATCACCGT+GGG | + | chr3.1:63497024-63497043 | MS.gene70661:intron | 60.0% |
| ! | ATGTTTTCGCAGTGCCGCGG+TGG | - | chr3.1:63496334-63496353 | None:intergenic | 60.0% |
| ! | CATTGACTAGCCAGGGAGGG+AGG | - | chr3.1:63497073-63497092 | None:intergenic | 60.0% |
| ! | CTAATGGTCTTGGGTGGGGG+AGG | + | chr3.1:63495951-63495970 | MS.gene70661:CDS | 60.0% |
| ! | TAGCTGGCTCCCAATCACCG+TGG | + | chr3.1:63497023-63497042 | MS.gene70661:intron | 60.0% |
| !! | ATTGCGTCGGCGCCGATTGA+AGG | - | chr3.1:63493949-63493968 | None:intergenic | 60.0% |
| !! | CGGGCTTTTTCCGTTCTGCC+AGG | + | chr3.1:63494272-63494291 | MS.gene70661:CDS | 60.0% |
| !! | TAGCATGGCGGATGCACACC+AGG | - | chr3.1:63499405-63499424 | None:intergenic | 60.0% |
| CCACCACGGAGATGGCGTTG+AGG | + | chr3.1:63495599-63495618 | MS.gene70661:CDS | 65.0% | |
| CCCCAAGTCCCCACGGTGAT+TGG | - | chr3.1:63497036-63497055 | None:intergenic | 65.0% | |
| CCGTTCTGCCAGGCTTCTGC+TGG | + | chr3.1:63494282-63494301 | MS.gene70661:CDS | 65.0% | |
| CCTCAACGCCATCTCCGTGG+TGG | - | chr3.1:63495602-63495621 | None:intergenic | 65.0% | |
| CCTCCTCAACGCCATCTCCG+TGG | - | chr3.1:63495605-63495624 | None:intergenic | 65.0% | |
| GCTTGCTCCCCAAGTCCCCA+CGG | - | chr3.1:63497043-63497062 | None:intergenic | 65.0% | |
| ! | CCACGGAGATGGCGTTGAGG+AGG | + | chr3.1:63495602-63495621 | MS.gene70661:CDS | 65.0% |
| ! | GCTGGCTCCCAATCACCGTG+GGG | + | chr3.1:63497025-63497044 | MS.gene70661:intron | 65.0% |
| CACTGGTGTGGGCCCTGGGA+AGG | + | chr3.1:63495707-63495726 | MS.gene70661:CDS | 70.0% | |
| TCTTCCGGCGCAGCGGCGAA+AGG | - | chr3.1:63494117-63494136 | None:intergenic | 70.0% | |
| CCGGCGCAGCGGCGAAAGGA+CGG | - | chr3.1:63494113-63494132 | None:intergenic | 75.0% | |
| CCGTCCTTTCGCCGCTGCGC+CGG | + | chr3.1:63494110-63494129 | MS.gene70661:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 63493913 | 63499425 | 63493913 | ID=MS.gene70661 |
| chr3.1 | mRNA | 63493913 | 63499425 | 63493913 | ID=MS.gene70661.t1;Parent=MS.gene70661 |
| chr3.1 | exon | 63493913 | 63494464 | 63493913 | ID=MS.gene70661.t1.exon1;Parent=MS.gene70661.t1 |
| chr3.1 | CDS | 63493913 | 63494464 | 63493913 | ID=cds.MS.gene70661.t1;Parent=MS.gene70661.t1 |
| chr3.1 | exon | 63495573 | 63496013 | 63495573 | ID=MS.gene70661.t1.exon2;Parent=MS.gene70661.t1 |
| chr3.1 | CDS | 63495573 | 63496013 | 63495573 | ID=cds.MS.gene70661.t1;Parent=MS.gene70661.t1 |
| chr3.1 | exon | 63496119 | 63496261 | 63496119 | ID=MS.gene70661.t1.exon3;Parent=MS.gene70661.t1 |
| chr3.1 | CDS | 63496119 | 63496261 | 63496119 | ID=cds.MS.gene70661.t1;Parent=MS.gene70661.t1 |
| chr3.1 | exon | 63497209 | 63497299 | 63497209 | ID=MS.gene70661.t1.exon4;Parent=MS.gene70661.t1 |
| chr3.1 | CDS | 63497209 | 63497299 | 63497209 | ID=cds.MS.gene70661.t1;Parent=MS.gene70661.t1 |
| chr3.1 | exon | 63497378 | 63497499 | 63497378 | ID=MS.gene70661.t1.exon5;Parent=MS.gene70661.t1 |
| chr3.1 | CDS | 63497378 | 63497499 | 63497378 | ID=cds.MS.gene70661.t1;Parent=MS.gene70661.t1 |
| chr3.1 | exon | 63499359 | 63499425 | 63499359 | ID=MS.gene70661.t1.exon6;Parent=MS.gene70661.t1 |
| chr3.1 | CDS | 63499359 | 63499425 | 63499359 | ID=cds.MS.gene70661.t1;Parent=MS.gene70661.t1 |
| Gene Sequence |
| Protein sequence |
