Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47817.t1 | XP_003597751.1 | 97.3 | 520 | 14 | 0 | 1 | 520 | 1 | 520 | 1.20E-287 | 998.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47817.t1 | A3KPF5 | 55.7 | 533 | 220 | 4 | 1 | 520 | 8 | 537 | 6.7e-170 | 598.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47817.t1 | G7II21 | 97.3 | 520 | 14 | 0 | 1 | 520 | 1 | 520 | 8.7e-288 | 998.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene76495 | MS.gene47817 | PPI |
| MS.gene007656 | MS.gene47817 | PPI |
| MS.gene074335 | MS.gene47817 | PPI |
| MS.gene31296 | MS.gene47817 | PPI |
| MS.gene75421 | MS.gene47817 | PPI |
| MS.gene013810 | MS.gene47817 | PPI |
| MS.gene045060 | MS.gene47817 | PPI |
| MS.gene08875 | MS.gene47817 | PPI |
| MS.gene08629 | MS.gene47817 | PPI |
| MS.gene36312 | MS.gene47817 | PPI |
| MS.gene028725 | MS.gene47817 | PPI |
| MS.gene85112 | MS.gene47817 | PPI |
| MS.gene47817 | MS.gene36312 | PPI |
| MS.gene058947 | MS.gene47817 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47817.t1 | MTR_2g101880 | 97.308 | 520 | 14 | 0 | 1 | 520 | 1 | 520 | 0.0 | 1040 |
| MS.gene47817.t1 | MTR_2g093500 | 83.196 | 363 | 22 | 3 | 158 | 520 | 197 | 520 | 0.0 | 587 |
| MS.gene47817.t1 | MTR_2g094180 | 33.546 | 471 | 309 | 3 | 43 | 511 | 58 | 526 | 3.14e-90 | 287 |
| MS.gene47817.t1 | MTR_4g059450 | 34.667 | 450 | 287 | 4 | 71 | 517 | 109 | 554 | 1.14e-85 | 276 |
| MS.gene47817.t1 | MTR_3g088220 | 26.829 | 451 | 298 | 14 | 55 | 486 | 26 | 463 | 2.69e-41 | 155 |
| MS.gene47817.t1 | MTR_1g096790 | 30.952 | 126 | 87 | 0 | 67 | 192 | 31 | 156 | 6.65e-14 | 74.3 |
| MS.gene47817.t1 | MTR_1g087520 | 35.398 | 113 | 69 | 3 | 67 | 177 | 34 | 144 | 1.66e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene47817.t1 | AT3G16110 | 59.476 | 496 | 197 | 2 | 26 | 520 | 42 | 534 | 0.0 | 630 |
| MS.gene47817.t1 | AT1G52260 | 56.098 | 533 | 218 | 5 | 1 | 520 | 8 | 537 | 0.0 | 613 |
| MS.gene47817.t1 | AT5G60640 | 31.614 | 446 | 302 | 2 | 67 | 511 | 108 | 551 | 3.13e-86 | 278 |
| MS.gene47817.t1 | AT5G60640 | 32.227 | 422 | 284 | 1 | 67 | 488 | 108 | 527 | 3.39e-85 | 273 |
| MS.gene47817.t1 | AT3G54960 | 31.983 | 469 | 313 | 4 | 46 | 511 | 82 | 547 | 1.80e-82 | 267 |
| MS.gene47817.t1 | AT3G54960 | 32.634 | 429 | 284 | 3 | 46 | 472 | 82 | 507 | 1.26e-75 | 248 |
| MS.gene47817.t1 | AT1G21750 | 27.928 | 444 | 292 | 11 | 58 | 484 | 26 | 458 | 4.53e-43 | 160 |
| MS.gene47817.t1 | AT1G21750 | 27.928 | 444 | 292 | 11 | 58 | 484 | 26 | 458 | 4.67e-43 | 160 |
| MS.gene47817.t1 | AT5G60640 | 31.034 | 261 | 178 | 1 | 67 | 327 | 108 | 366 | 6.14e-41 | 155 |
| MS.gene47817.t1 | AT5G60640 | 35.185 | 162 | 98 | 3 | 356 | 511 | 327 | 487 | 1.13e-26 | 114 |
| MS.gene47817.t1 | AT1G77510 | 26.126 | 444 | 293 | 12 | 61 | 484 | 28 | 456 | 1.61e-36 | 142 |
| MS.gene47817.t1 | AT1G35620 | 28.682 | 129 | 92 | 0 | 64 | 192 | 34 | 162 | 2.68e-13 | 72.4 |
Find 76 sgRNAs with CRISPR-Local
Find 317 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTAATTCTTTGAAAGATTT+TGG | 0.089611 | 2.1:-3361016 | MS.gene47817:CDS |
| CCATATGCGGTATATCTTTC+AGG | 0.169483 | 2.1:+3358464 | None:intergenic |
| TATGAGTTTGTTCTTGTTCT+TGG | 0.207274 | 2.1:-3361094 | MS.gene47817:CDS |
| CTCACAAATTCTTCATATTC+AGG | 0.208421 | 2.1:+3358605 | None:intergenic |
| ATAACACTTACTTGCAGTTT+TGG | 0.236921 | 2.1:+3356308 | None:intergenic |
| AACGAACTGGGTTTCATTAT+CGG | 0.273450 | 2.1:+3358571 | None:intergenic |
| CCAGGGATGATATAGTTATA+TGG | 0.298093 | 2.1:-3358898 | MS.gene47817:intron |
| GGGACTTCTCAACCTTATTC+TGG | 0.302350 | 2.1:-3360893 | MS.gene47817:CDS |
| CATACGGTTCTCACATTATC+AGG | 0.308837 | 2.1:+3357180 | None:intergenic |
| AAGCCCTTCCTGACAATGTT+TGG | 0.312127 | 2.1:-3357533 | MS.gene47817:CDS |
| GAAATCTAGTTTGAAAGAAT+TGG | 0.324131 | 2.1:-3356004 | MS.gene47817:CDS |
| TAGTTATATGGGCAAGAAAA+AGG | 0.325886 | 2.1:-3358886 | MS.gene47817:CDS |
| AATGAGCTCAAAATTTCTAT+TGG | 0.339596 | 2.1:-3357376 | MS.gene47817:CDS |
| AATACAGAGAGAATTGTTAA+TGG | 0.344904 | 2.1:-3361118 | MS.gene47817:CDS |
| TTTGTTCTATAGCTCATCTT+TGG | 0.362837 | 2.1:+3355939 | None:intergenic |
| TTACCAGTAGGCTTGATATC+TGG | 0.364195 | 2.1:+3358512 | None:intergenic |
| TCAGTGAGTTGTGTAACTAA+TGG | 0.364943 | 2.1:+3357999 | None:intergenic |
| GACTTTAACGTGTTTGTTGA+TGG | 0.366916 | 2.1:+3355975 | None:intergenic |
| GGACCGGTACGCCTGTTATT+CGG | 0.368158 | 2.1:-3358865 | MS.gene47817:CDS |
| ATGAACAATCCTTTGTGCTT+TGG | 0.369989 | 2.1:+3361156 | None:intergenic |
| TCTGTACTTATCCGAATAAC+AGG | 0.370638 | 2.1:+3358854 | None:intergenic |
| TTTCACATTGGATAAAATAA+TGG | 0.380230 | 2.1:-3358045 | MS.gene47817:CDS |
| CCTTACTCACTTCAACGAAC+TGG | 0.381222 | 2.1:+3358558 | None:intergenic |
| GTTCTCACATTATCAGGTAT+TGG | 0.390542 | 2.1:+3357186 | None:intergenic |
| TGGCTAAGGTGGATGGTGAT+AGG | 0.395436 | 2.1:-3360979 | MS.gene47817:CDS |
| CTTCAAGTCCAAACATTGTC+AGG | 0.406857 | 2.1:+3357525 | None:intergenic |
| TGAAAGTGAGTAATAAGAAA+AGG | 0.412418 | 2.1:+3361299 | None:intergenic |
| GCAGTGAAACCGCCAGAATA+AGG | 0.416833 | 2.1:+3360881 | None:intergenic |
| GCTAGTGTTCAAGTTATTGT+TGG | 0.429589 | 2.1:-3356841 | MS.gene47817:CDS |
| CTAGTGTTCAAGTTATTGTT+GGG | 0.430931 | 2.1:-3356840 | MS.gene47817:CDS |
| GTAATAAGAAAAGGGTTAGA+AGG | 0.435787 | 2.1:+3361308 | None:intergenic |
| CCTGAAAGATATACCGCATA+TGG | 0.440943 | 2.1:-3358464 | MS.gene47817:intron |
| AAGGGTTAGAAGGAAATTGA+TGG | 0.446480 | 2.1:+3361318 | None:intergenic |
| ATACAGAGAGAATTGTTAAT+GGG | 0.447131 | 2.1:-3361117 | MS.gene47817:CDS |
| CAGGGATGATATAGTTATAT+GGG | 0.451483 | 2.1:-3358897 | MS.gene47817:CDS |
| GCAGATAATGTTTATATATG+TGG | 0.452676 | 2.1:-3357579 | MS.gene47817:intron |
| TGATATCTGGATAAAGAACT+TGG | 0.455272 | 2.1:+3358525 | None:intergenic |
| TAGGTAGCTGCATTTGATAA+TGG | 0.459475 | 2.1:-3357399 | MS.gene47817:CDS |
| GAAAGTGAGTAATAAGAAAA+GGG | 0.465790 | 2.1:+3361300 | None:intergenic |
| ATAGTGACCTGATGCTTGAC+TGG | 0.468872 | 2.1:+3357948 | None:intergenic |
| GTTCTTGCTACTTCTTGAAG+TGG | 0.473690 | 2.1:+3357688 | None:intergenic |
| AAGCAAGCAAGTAGAGAAGT+TGG | 0.475868 | 2.1:-3356396 | MS.gene47817:CDS |
| TGGACGCTTTGATAAATTTG+AGG | 0.477543 | 2.1:-3358786 | MS.gene47817:intron |
| TCACAAATTCTTCATATTCA+GGG | 0.484612 | 2.1:+3358606 | None:intergenic |
| CGATGAATTAGAGCGAGAAA+AGG | 0.490504 | 2.1:-3361218 | MS.gene47817:CDS |
| CCAGTTCGTTGAAGTGAGTA+AGG | 0.492979 | 2.1:-3358558 | MS.gene47817:CDS |
| CTCAAGCCCAGTCAAGCATC+AGG | 0.496175 | 2.1:-3357955 | MS.gene47817:intron |
| CTTACTCACTTCAACGAACT+GGG | 0.500498 | 2.1:+3358559 | None:intergenic |
| TTGTTCTTGGTTATGCACCT+TGG | 0.519190 | 2.1:-3361081 | MS.gene47817:CDS |
| TTTGAACAGCAAGAAGGATG+TGG | 0.523070 | 2.1:-3356797 | MS.gene47817:CDS |
| TGCTTTGTAAAGTAAAAGTG+TGG | 0.524790 | 2.1:+3356149 | None:intergenic |
| AGCAAATGATAAGACAAATC+CGG | 0.525248 | 2.1:-3356130 | MS.gene47817:intron |
| AGCAAGAACTTTCAAGTCGA+AGG | 0.533751 | 2.1:-3357674 | MS.gene47817:intron |
| ACTTCAATATTGCTTCGTGT+TGG | 0.548950 | 2.1:+3357345 | None:intergenic |
| AAGTCCAAACATTGTCAGGA+AGG | 0.556542 | 2.1:+3357529 | None:intergenic |
| TATCCAGATATCAAGCCTAC+TGG | 0.559989 | 2.1:-3358515 | MS.gene47817:CDS |
| AGTCCAAACATTGTCAGGAA+GGG | 0.584516 | 2.1:+3357530 | None:intergenic |
| AAGTACAGAGAAAGCAGCAG+AGG | 0.586670 | 2.1:-3358840 | MS.gene47817:CDS |
| GATATCTGGATAAAGAACTT+GGG | 0.587382 | 2.1:+3358526 | None:intergenic |
| CAACAAACACGTTAAAGTCA+AGG | 0.593096 | 2.1:-3355971 | MS.gene47817:CDS |
| GCTTTGTAAAGTAAAAGTGT+GGG | 0.593935 | 2.1:+3356150 | None:intergenic |
| TATCCGAATAACAGGCGTAC+CGG | 0.594808 | 2.1:+3358862 | None:intergenic |
| TTGTCAGGAAGGGCTTTGCA+AGG | 0.600589 | 2.1:+3357540 | None:intergenic |
| TGCAGATGGAGCTTTCACAT+TGG | 0.601683 | 2.1:-3358057 | MS.gene47817:intron |
| TAAAACAGGTATTCACACCT+TGG | 0.615751 | 2.1:-3356439 | MS.gene47817:intron |
| TGTGAAATCTTCTGAAGCAG+AGG | 0.616463 | 2.1:-3361185 | MS.gene47817:CDS |
| TTAGCAGCTTCAGCAAAATG+AGG | 0.626528 | 2.1:+3361034 | None:intergenic |
| GAGCGAGAAAAGGATCATGA+TGG | 0.628062 | 2.1:-3361208 | MS.gene47817:CDS |
| ACTTCTCAACCTTATTCTGG+CGG | 0.638923 | 2.1:-3360890 | MS.gene47817:CDS |
| ACCTTGGTGTTTCAACTGTG+AGG | 0.643924 | 2.1:-3356423 | MS.gene47817:CDS |
| TAGTGACCTGATGCTTGACT+GGG | 0.645214 | 2.1:+3357949 | None:intergenic |
| AATCACAGACTCACCATATG+CGG | 0.657662 | 2.1:+3358451 | None:intergenic |
| TGAAGAATCAACAAATACTG+TGG | 0.674899 | 2.1:-3357507 | MS.gene47817:intron |
| TCCTCACAGTTGAAACACCA+AGG | 0.681229 | 2.1:+3356422 | None:intergenic |
| ATCCCGAGAAAATTACCAGT+AGG | 0.692322 | 2.1:+3358500 | None:intergenic |
| TCTGCACTTCTTGAACACCA+AGG | 0.713931 | 2.1:+3361064 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCAATATTAATAATGATAA+TGG | - | chr2.1:3360388-3360407 | MS.gene47817:intron | 10.0% |
| !!! | AATTTAAAATTTTGATAACA+AGG | + | chr2.1:3356908-3356927 | None:intergenic | 10.0% |
| !!! | ATTTAAAATTTTGATAACAA+GGG | + | chr2.1:3356907-3356926 | None:intergenic | 10.0% |
| !! | AGTACTTATAGTAAAAAATA+TGG | - | chr2.1:3356609-3356628 | MS.gene47817:intron | 15.0% |
| !! | ATCCAATTATAAATAAAACT+TGG | + | chr2.1:3359356-3359375 | None:intergenic | 15.0% |
| !! | ATTTATAATTGGATATTCAA+TGG | - | chr2.1:3359362-3359381 | MS.gene47817:intron | 15.0% |
| !!! | AACTTATACAAATTATTTCT+TGG | - | chr2.1:3359842-3359861 | MS.gene47817:intron | 15.0% |
| !!! | AATTTAAAATTTGGTAACAA+GGG | + | chr2.1:3357679-3357698 | None:intergenic | 15.0% |
| !!! | CATTTTATCCATAAAAAAAT+TGG | + | chr2.1:3360637-3360656 | None:intergenic | 15.0% |
| !!! | TATTCTTTTATACATATAGT+TGG | - | chr2.1:3360277-3360296 | MS.gene47817:intron | 15.0% |
| !!! | TTCCAAGTTTTATTTATAAT+TGG | - | chr2.1:3359351-3359370 | MS.gene47817:intron | 15.0% |
| !! | AAAATTATATCACCAAAATC+AGG | + | chr2.1:3361186-3361205 | None:intergenic | 20.0% |
| !! | AAATTATATCACCAAAATCA+GGG | + | chr2.1:3361185-3361204 | None:intergenic | 20.0% |
| !! | AACTAATATATGACAGAATT+TGG | + | chr2.1:3360691-3360710 | None:intergenic | 20.0% |
| !! | AATTACTTTGATCTGTATTT+GGG | - | chr2.1:3359623-3359642 | MS.gene47817:intron | 20.0% |
| !! | AATTCTGTCATATATTAGTT+TGG | - | chr2.1:3360691-3360710 | MS.gene47817:intron | 20.0% |
| !! | ACAAAATAGTTTCATTATTC+TGG | - | chr2.1:3358596-3358615 | MS.gene47817:CDS | 20.0% |
| !! | ACTTATAGTAAAAAATATGG+TGG | - | chr2.1:3356612-3356631 | MS.gene47817:intron | 20.0% |
| !! | ATAAATAGTTCAACACTTAT+CGG | + | chr2.1:3357885-3357904 | None:intergenic | 20.0% |
| !! | CTAAATAGTTCAACATTTAT+CGG | + | chr2.1:3358298-3358317 | None:intergenic | 20.0% |
| !! | GAAACTAATTAATGTTAACT+TGG | - | chr2.1:3360000-3360019 | MS.gene47817:intron | 20.0% |
| !! | GATATAGATAGAAAATTATG+TGG | - | chr2.1:3356816-3356835 | MS.gene47817:CDS | 20.0% |
| !! | TAATTACTTTGATCTGTATT+TGG | - | chr2.1:3359622-3359641 | MS.gene47817:intron | 20.0% |
| !! | TATAAGAGAAACTATTAAGA+AGG | - | chr2.1:3356753-3356772 | MS.gene47817:intron | 20.0% |
| !! | TCAAAATTTATGTTTACTGA+AGG | - | chr2.1:3361061-3361080 | MS.gene47817:CDS | 20.0% |
| !! | TGTTCATACTTATTTAAAGA+GGG | - | chr2.1:3360551-3360570 | MS.gene47817:intron | 20.0% |
| !! | TTAAATTGAAAGGCTTATAA+AGG | + | chr2.1:3360220-3360239 | None:intergenic | 20.0% |
| !! | TTTAATAGCTATTAATCCTA+TGG | + | chr2.1:3357406-3357425 | None:intergenic | 20.0% |
| !! | TTTATCAATCTAGATAATTG+TGG | - | chr2.1:3359818-3359837 | MS.gene47817:intron | 20.0% |
| !! | TTTCACATTGGATAAAATAA+TGG | - | chr2.1:3359228-3359247 | MS.gene47817:intron | 20.0% |
| !!! | ATCAAAATTTTAAATTGCTG+CGG | - | chr2.1:3356912-3356931 | MS.gene47817:intron | 20.0% |
| !!! | GAATTTAAAATTTGGTAACA+AGG | + | chr2.1:3357680-3357699 | None:intergenic | 20.0% |
| !!! | GATTTAAAACTTTGATAACA+AGG | + | chr2.1:3358095-3358114 | None:intergenic | 20.0% |
| !!! | TACATTTGTTATTATTACCA+TGG | - | chr2.1:3357562-3357581 | MS.gene47817:CDS | 20.0% |
| !!! | TCTCGTCTTTTTTTATTTAA+TGG | - | chr2.1:3361001-3361020 | MS.gene47817:CDS | 20.0% |
| ! | AAAGGAAAAAAAAATCATGG+CGG | + | chr2.1:3359134-3359153 | None:intergenic | 25.0% |
| ! | AATACAGAGAGAATTGTTAA+TGG | - | chr2.1:3356155-3356174 | MS.gene47817:CDS | 25.0% |
| ! | AATGAGCTCAAAATTTCTAT+TGG | - | chr2.1:3359897-3359916 | MS.gene47817:intron | 25.0% |
| ! | ATAAAAAAATTGGTGCAAAG+TGG | + | chr2.1:3360627-3360646 | None:intergenic | 25.0% |
| ! | ATAAATTGCCTTTAGTAACT+TGG | - | chr2.1:3357908-3357927 | MS.gene47817:intron | 25.0% |
| ! | ATAATTCCTAATCATCCTAA+CGG | - | chr2.1:3357359-3357378 | MS.gene47817:CDS | 25.0% |
| ! | ATACAGAGAGAATTGTTAAT+GGG | - | chr2.1:3356156-3356175 | MS.gene47817:CDS | 25.0% |
| ! | ATACTTATTTAAAGAGGGAA+GGG | - | chr2.1:3360556-3360575 | MS.gene47817:intron | 25.0% |
| ! | ATCGTTTCAAATAACAAGTA+AGG | + | chr2.1:3357850-3357869 | None:intergenic | 25.0% |
| ! | ATTACTTTGATCTGTATTTG+GGG | - | chr2.1:3359624-3359643 | MS.gene47817:intron | 25.0% |
| ! | CCTAAAATGTTTATATGTTG+AGG | - | chr2.1:3358337-3358356 | MS.gene47817:intron | 25.0% |
| ! | CTCAAGTTAATAGAAAAAAC+AGG | + | chr2.1:3359038-3359057 | None:intergenic | 25.0% |
| ! | GAAAGTGAGTAATAAGAAAA+GGG | + | chr2.1:3355976-3355995 | None:intergenic | 25.0% |
| ! | GAATAACAGACAATTAACAT+TGG | + | chr2.1:3359515-3359534 | None:intergenic | 25.0% |
| ! | GCAGATAATGTTTATATATG+TGG | - | chr2.1:3359694-3359713 | MS.gene47817:intron | 25.0% |
| ! | GTAACTTGGAATGTTTATAT+AGG | - | chr2.1:3357922-3357941 | MS.gene47817:intron | 25.0% |
| ! | GTGAAAGGAAAAAAAAATCA+TGG | + | chr2.1:3359137-3359156 | None:intergenic | 25.0% |
| ! | GTGTTCATACTTATTTAAAG+AGG | - | chr2.1:3360550-3360569 | MS.gene47817:intron | 25.0% |
| ! | GTTTGTATTAAAATATGCCA+GGG | - | chr2.1:3358644-3358663 | MS.gene47817:intron | 25.0% |
| ! | TAAAAAATATGGTGGTAACT+AGG | - | chr2.1:3356620-3356639 | MS.gene47817:intron | 25.0% |
| ! | TAAACATTATCTGCATTTGA+AGG | + | chr2.1:3359688-3359707 | None:intergenic | 25.0% |
| ! | TAAACATTCCAAGTTACTAA+AGG | + | chr2.1:3357919-3357938 | None:intergenic | 25.0% |
| ! | TAGAAAAAACAGGAATTTCA+AGG | + | chr2.1:3359028-3359047 | None:intergenic | 25.0% |
| ! | TAGTTTCATTATTCTGGATT+TGG | - | chr2.1:3358602-3358621 | MS.gene47817:CDS | 25.0% |
| ! | TCACAAATTCTTCATATTCA+GGG | + | chr2.1:3358670-3358689 | None:intergenic | 25.0% |
| ! | TGAAAGTGAGTAATAAGAAA+AGG | + | chr2.1:3355977-3355996 | None:intergenic | 25.0% |
| ! | TGGAGTTAAGAAGTTAATTA+GGG | + | chr2.1:3357463-3357482 | None:intergenic | 25.0% |
| ! | TGTTTGTATTAAAATATGCC+AGG | - | chr2.1:3358643-3358662 | MS.gene47817:intron | 25.0% |
| ! | TTCTACATTATTTATTCCCA+TGG | - | chr2.1:3356477-3356496 | MS.gene47817:intron | 25.0% |
| ! | TTGGAGTTAAGAAGTTAATT+AGG | + | chr2.1:3357464-3357483 | None:intergenic | 25.0% |
| !! | CCTCAACATATAAACATTTT+AGG | + | chr2.1:3358340-3358359 | None:intergenic | 25.0% |
| !! | GAAATCTAGTTTGAAAGAAT+TGG | - | chr2.1:3361269-3361288 | MS.gene47817:CDS | 25.0% |
| !! | TCTTAATTGTTGTTGTTATG+CGG | - | chr2.1:3357759-3357778 | MS.gene47817:intron | 25.0% |
| !! | TTTACCTTTCCTAATTTTTC+AGG | - | chr2.1:3361089-3361108 | MS.gene47817:CDS | 25.0% |
| !!! | ACTTTGCACCAATTTTTTTA+TGG | - | chr2.1:3360626-3360645 | MS.gene47817:intron | 25.0% |
| !!! | GCTAATTCTTTGAAAGATTT+TGG | - | chr2.1:3356257-3356276 | MS.gene47817:intron | 25.0% |
| !!! | GTTATCAAAGTTTTAAATCG+TGG | - | chr2.1:3358096-3358115 | MS.gene47817:intron | 25.0% |
| !!! | TTGTTCTGAAACTTAATTCA+AGG | - | chr2.1:3360360-3360379 | MS.gene47817:intron | 25.0% |
| !!! | TTTTGGAAATTCTCTTGTTT+TGG | - | chr2.1:3356274-3356293 | MS.gene47817:intron | 25.0% |
| !!! | TTTTTCTATTAACTTGAGCT+GGG | - | chr2.1:3359040-3359059 | MS.gene47817:intron | 25.0% |
| !!! | TTTTTTCTATTAACTTGAGC+TGG | - | chr2.1:3359039-3359058 | MS.gene47817:intron | 25.0% |
| AACAACAATTAAGACTGCAT+CGG | + | chr2.1:3357753-3357772 | None:intergenic | 30.0% | |
| AACAAGAGAATGATTCTAAC+TGG | - | chr2.1:3357135-3357154 | MS.gene47817:intron | 30.0% | |
| AAGGAAAAAAAAATCATGGC+GGG | + | chr2.1:3359133-3359152 | None:intergenic | 30.0% | |
| ACAAGTAAGGTTTCAAAACA+AGG | + | chr2.1:3357837-3357856 | None:intergenic | 30.0% | |
| ACATTTCAAGAACATCAGTT+GGG | - | chr2.1:3360174-3360193 | MS.gene47817:intron | 30.0% | |
| ACCTCAACATATAAACATTC+AGG | + | chr2.1:3357050-3357069 | None:intergenic | 30.0% | |
| ACTAGTAGTAATAGAAACCA+TGG | + | chr2.1:3356497-3356516 | None:intergenic | 30.0% | |
| ACTGTTAGGACTTAGAATAA+AGG | + | chr2.1:3357501-3357520 | None:intergenic | 30.0% | |
| AGCAAATGATAAGACAAATC+CGG | - | chr2.1:3361143-3361162 | MS.gene47817:CDS | 30.0% | |
| AGTCATTCACCTGAAAAATT+AGG | + | chr2.1:3361101-3361120 | None:intergenic | 30.0% | |
| ATTCAAATCTGCTCAGTATT+GGG | + | chr2.1:3357114-3357133 | None:intergenic | 30.0% | |
| ATTGAAAGAGAAGATACACA+AGG | - | chr2.1:3357247-3357266 | MS.gene47817:intron | 30.0% | |
| CAGGGATGATATAGTTATAT+GGG | - | chr2.1:3358376-3358395 | MS.gene47817:intron | 30.0% | |
| CATACTTATTTAAAGAGGGA+AGG | - | chr2.1:3360555-3360574 | MS.gene47817:intron | 30.0% | |
| CTAGTAGTAATAGAAACCAT+GGG | + | chr2.1:3356496-3356515 | None:intergenic | 30.0% | |
| CTCACAAATTCTTCATATTC+AGG | + | chr2.1:3358671-3358690 | None:intergenic | 30.0% | |
| CTTTCGATATACCAAAAAAC+AGG | + | chr2.1:3357087-3357106 | None:intergenic | 30.0% | |
| GATATCTGGATAAAGAACTT+GGG | + | chr2.1:3358750-3358769 | None:intergenic | 30.0% | |
| GGAGTTAAGAAGTTAATTAG+GGG | + | chr2.1:3357462-3357481 | None:intergenic | 30.0% | |
| GGATAATTGTAGTCAAAATG+TGG | - | chr2.1:3358142-3358161 | MS.gene47817:intron | 30.0% | |
| GTAATAAGAAAAGGGTTAGA+AGG | + | chr2.1:3355968-3355987 | None:intergenic | 30.0% | |
| TAACAAAAAGCAGCAAAGTA+GGG | + | chr2.1:3356358-3356377 | None:intergenic | 30.0% | |
| TAACTAGGCTTAGATGATTT+GGG | - | chr2.1:3356635-3356654 | MS.gene47817:intron | 30.0% | |
| TAATCCTATGGCCTATAAAT+AGG | + | chr2.1:3357394-3357413 | None:intergenic | 30.0% | |
| TAATTCCTAATCATCCTAAC+GGG | - | chr2.1:3357360-3357379 | MS.gene47817:CDS | 30.0% | |
| TACTTATTTAAAGAGGGAAG+GGG | - | chr2.1:3360557-3360576 | MS.gene47817:intron | 30.0% | |
| TAGTTATATGGGCAAGAAAA+AGG | - | chr2.1:3358387-3358406 | MS.gene47817:intron | 30.0% | |
| TATTCAAATCTGCTCAGTAT+TGG | + | chr2.1:3357115-3357134 | None:intergenic | 30.0% | |
| TCATGCAGAAAAATGTCATA+CGG | + | chr2.1:3360112-3360131 | None:intergenic | 30.0% | |
| TGAAGAATCAACAAATACTG+TGG | - | chr2.1:3359766-3359785 | MS.gene47817:intron | 30.0% | |
| TGATATCTGGATAAAGAACT+TGG | + | chr2.1:3358751-3358770 | None:intergenic | 30.0% | |
| TGCTTTGTAAAGTAAAAGTG+TGG | + | chr2.1:3361127-3361146 | None:intergenic | 30.0% | |
| TGGTTATTCTTAAGCTAGAA+CGG | + | chr2.1:3359495-3359514 | None:intergenic | 30.0% | |
| TTAACAAAAAGCAGCAAAGT+AGG | + | chr2.1:3356359-3356378 | None:intergenic | 30.0% | |
| TTAATTGTCTGTTATTCCCT+AGG | - | chr2.1:3359518-3359537 | MS.gene47817:intron | 30.0% | |
| TTCACCTGAAAAATTAGGAA+AGG | + | chr2.1:3361096-3361115 | None:intergenic | 30.0% | |
| TTGAAGGAAAAATTTAGACC+AGG | + | chr2.1:3359672-3359691 | None:intergenic | 30.0% | |
| TTTGGAGAAAAACAAGTGAA+AGG | + | chr2.1:3359152-3359171 | None:intergenic | 30.0% | |
| ! | AAGTATCACACTTTTCTCAT+TGG | - | chr2.1:3358467-3358486 | MS.gene47817:CDS | 30.0% |
| ! | AGAAATTTTGAACAGCAAGA+AGG | - | chr2.1:3360470-3360489 | MS.gene47817:intron | 30.0% |
| ! | ATAACACTTACTTGCAGTTT+TGG | + | chr2.1:3360968-3360987 | None:intergenic | 30.0% |
| ! | ATTAATTAGTTTCCTTCAGC+AGG | + | chr2.1:3359993-3360012 | None:intergenic | 30.0% |
| ! | CTAGTGTTCAAGTTATTGTT+GGG | - | chr2.1:3360433-3360452 | MS.gene47817:intron | 30.0% |
| ! | GCTTTGTAAAGTAAAAGTGT+GGG | + | chr2.1:3361126-3361145 | None:intergenic | 30.0% |
| ! | GTTTCTCTTATAGTTTGTCT+TGG | + | chr2.1:3356745-3356764 | None:intergenic | 30.0% |
| ! | TATGAGTTTGTTCTTGTTCT+TGG | - | chr2.1:3356179-3356198 | MS.gene47817:intron | 30.0% |
| ! | TATTTGAAACGATGAACTCA+AGG | - | chr2.1:3357857-3357876 | MS.gene47817:intron | 30.0% |
| ! | TGTCATATATTAGTTTGGAG+TGG | - | chr2.1:3360696-3360715 | MS.gene47817:intron | 30.0% |
| !! | GTATTCTAGAGACTTGTTAA+TGG | - | chr2.1:3357630-3357649 | MS.gene47817:intron | 30.0% |
| !! | TATGTTGAGGTGTTTTTGTA+AGG | - | chr2.1:3357059-3357078 | MS.gene47817:intron | 30.0% |
| !!! | AAATTCTCTTGTTTTGGCTA+AGG | - | chr2.1:3356280-3356299 | MS.gene47817:intron | 30.0% |
| !!! | ACTTTGCTGCTTTTTGTTAA+TGG | - | chr2.1:3356359-3356378 | MS.gene47817:CDS | 30.0% |
| !!! | CTTTGCTGCTTTTTGTTAAT+GGG | - | chr2.1:3356360-3356379 | MS.gene47817:CDS | 30.0% |
| AACGAACTGGGTTTCATTAT+CGG | + | chr2.1:3358705-3358724 | None:intergenic | 35.0% | |
| AAGCAGATAAGCAATATGAC+AGG | + | chr2.1:3360772-3360791 | None:intergenic | 35.0% | |
| AAGGATCGAGATTAATGAGT+TGG | - | chr2.1:3356772-3356791 | MS.gene47817:intron | 35.0% | |
| AAGGGTTAGAAGGAAATTGA+TGG | + | chr2.1:3355958-3355977 | None:intergenic | 35.0% | |
| AATTCAGGACATAAACATCG+AGG | + | chr2.1:3357803-3357822 | None:intergenic | 35.0% | |
| ACATTGTGTCTTTGATACTG+TGG | - | chr2.1:3358121-3358140 | MS.gene47817:intron | 35.0% | |
| ACTAGAACGAATTGAGCATA+TGG | + | chr2.1:3358857-3358876 | None:intergenic | 35.0% | |
| ACTTCAATATTGCTTCGTGT+TGG | + | chr2.1:3359931-3359950 | None:intergenic | 35.0% | |
| AGAATAAAGGAGAGTTTGTC+AGG | + | chr2.1:3357488-3357507 | None:intergenic | 35.0% | |
| AGCAGATAAGCAATATGACA+GGG | + | chr2.1:3360771-3360790 | None:intergenic | 35.0% | |
| AGGTCATGGCAAAACTTTAT+TGG | - | chr2.1:3359190-3359209 | MS.gene47817:intron | 35.0% | |
| AGTTATGAGAGTAGATCAGA+TGG | - | chr2.1:3356687-3356706 | MS.gene47817:intron | 35.0% | |
| ATCAAATGCAGCTACCTATT+TGG | + | chr2.1:3359872-3359891 | None:intergenic | 35.0% | |
| ATGAACAATCCTTTGTGCTT+TGG | + | chr2.1:3356120-3356139 | None:intergenic | 35.0% | |
| CAAATCCGGTAATTACTCAA+TGG | - | chr2.1:3361157-3361176 | MS.gene47817:CDS | 35.0% | |
| CAACAAACACGTTAAAGTCA+AGG | - | chr2.1:3361302-3361321 | MS.gene47817:CDS | 35.0% | |
| CACTATTAAGAATCACAACG+CGG | + | chr2.1:3357706-3357725 | None:intergenic | 35.0% | |
| CATCTCATAATGTATTCGAG+AGG | - | chr2.1:3358520-3358539 | MS.gene47817:CDS | 35.0% | |
| CCAGGGATGATATAGTTATA+TGG | - | chr2.1:3358375-3358394 | MS.gene47817:intron | 35.0% | |
| CCATATAACTATATCATCCC+TGG | + | chr2.1:3358378-3358397 | None:intergenic | 35.0% | |
| CGTGAATCATTACGTAAAAC+AGG | - | chr2.1:3360820-3360839 | MS.gene47817:intron | 35.0% | |
| CGTTGTGATTCTTAATAGTG+TGG | - | chr2.1:3357706-3357725 | MS.gene47817:CDS | 35.0% | |
| CTAACAGTTGAATGGGAAAT+AGG | - | chr2.1:3357224-3357243 | MS.gene47817:CDS | 35.0% | |
| GAAATGTCGAACACTATAGT+AGG | + | chr2.1:3360161-3360180 | None:intergenic | 35.0% | |
| GACATTTCAAGAACATCAGT+TGG | - | chr2.1:3360173-3360192 | MS.gene47817:intron | 35.0% | |
| GAGAGTAATCAAATCAGTAG+AGG | - | chr2.1:3356709-3356728 | MS.gene47817:intron | 35.0% | |
| GATGTTTATGTCCTGAATTG+TGG | - | chr2.1:3357804-3357823 | MS.gene47817:intron | 35.0% | |
| GCATGTAAAGAGAAGAACTA+TGG | - | chr2.1:3356657-3356676 | MS.gene47817:intron | 35.0% | |
| GCCTGAATGTTTATATGTTG+AGG | - | chr2.1:3357046-3357065 | MS.gene47817:intron | 35.0% | |
| GTAACTAGGCTTAGATGATT+TGG | - | chr2.1:3356634-3356653 | MS.gene47817:intron | 35.0% | |
| GTAGTAGAAACTAGAAACCA+TGG | + | chr2.1:3357582-3357601 | None:intergenic | 35.0% | |
| GTTCTCACATTATCAGGTAT+TGG | + | chr2.1:3360090-3360109 | None:intergenic | 35.0% | |
| TAAAACAGGTATTCACACCT+TGG | - | chr2.1:3360834-3360853 | MS.gene47817:intron | 35.0% | |
| TAGACCAGGAAATTGCATAA+CGG | + | chr2.1:3359658-3359677 | None:intergenic | 35.0% | |
| TAGGATGAGAAATGACTAGT+TGG | - | chr2.1:3356583-3356602 | MS.gene47817:intron | 35.0% | |
| TAGGTAGCTGCATTTGATAA+TGG | - | chr2.1:3359874-3359893 | MS.gene47817:intron | 35.0% | |
| TAGTCCTATTTATAGGCCAT+AGG | - | chr2.1:3357387-3357406 | MS.gene47817:CDS | 35.0% | |
| TCAGTGAGTTGTGTAACTAA+TGG | + | chr2.1:3359277-3359296 | None:intergenic | 35.0% | |
| TCTCGTACTAACAGTTGAAT+GGG | - | chr2.1:3357217-3357236 | MS.gene47817:CDS | 35.0% | |
| TCTGTACTTATCCGAATAAC+AGG | + | chr2.1:3358422-3358441 | None:intergenic | 35.0% | |
| TGGACGCTTTGATAAATTTG+AGG | - | chr2.1:3358487-3358506 | MS.gene47817:CDS | 35.0% | |
| TTCGCAAAGACAAAAACCTA+GGG | + | chr2.1:3359537-3359556 | None:intergenic | 35.0% | |
| TTCTCGTACTAACAGTTGAA+TGG | - | chr2.1:3357216-3357235 | MS.gene47817:CDS | 35.0% | |
| ! | AAAGCACTATTTCGACATCA+AGG | + | chr2.1:3357536-3357555 | None:intergenic | 35.0% |
| ! | AACTTTATTGGCTATGCAGA+TGG | - | chr2.1:3359202-3359221 | MS.gene47817:intron | 35.0% |
| ! | AAGCCTACTGGTAATTTTCT+CGG | - | chr2.1:3358770-3358789 | MS.gene47817:intron | 35.0% |
| ! | ACTAAAGCTGCTTCTTTTCT+TGG | - | chr2.1:3356320-3356339 | MS.gene47817:CDS | 35.0% |
| ! | AGGATGAGAAATGACTAGTT+GGG | - | chr2.1:3356584-3356603 | MS.gene47817:intron | 35.0% |
| ! | ATCATTTGGGATAACAGGTA+GGG | + | chr2.1:3358263-3358282 | None:intergenic | 35.0% |
| ! | ATGATTTTCCTATGCATCCA+AGG | - | chr2.1:3360128-3360147 | MS.gene47817:intron | 35.0% |
| ! | ATGTTAACTTGGAATTCTGC+AGG | - | chr2.1:3360011-3360030 | MS.gene47817:intron | 35.0% |
| ! | CGAGATTAATGAGTTGGATA+TGG | - | chr2.1:3356778-3356797 | MS.gene47817:intron | 35.0% |
| ! | CGCGGCAAGAATTTAAAATT+TGG | + | chr2.1:3357688-3357707 | None:intergenic | 35.0% |
| ! | CTAAAGCTGCTTCTTTTCTT+GGG | - | chr2.1:3356321-3356340 | MS.gene47817:CDS | 35.0% |
| ! | GACTTTAACGTGTTTGTTGA+TGG | + | chr2.1:3361301-3361320 | None:intergenic | 35.0% |
| ! | GCTAGTGTTCAAGTTATTGT+TGG | - | chr2.1:3360432-3360451 | MS.gene47817:intron | 35.0% |
| ! | GCTTCTTTTCTTGGGATTAA+AGG | - | chr2.1:3356329-3356348 | MS.gene47817:CDS | 35.0% |
| ! | TATTTCTTGGTGTGCCAAAT+AGG | - | chr2.1:3359855-3359874 | MS.gene47817:intron | 35.0% |
| ! | TGAGTTGGATATGGATAGAT+AGG | - | chr2.1:3356787-3356806 | MS.gene47817:intron | 35.0% |
| ! | TTATTCTGGATTTGGTACTG+TGG | - | chr2.1:3358610-3358629 | MS.gene47817:CDS | 35.0% |
| ! | TTCTAGAGACATCAAAAACC+TGG | - | chr2.1:3358197-3358216 | MS.gene47817:intron | 35.0% |
| ! | TTTTGCAGTAAACTTGTGCA+AGG | - | chr2.1:3360036-3360055 | MS.gene47817:intron | 35.0% |
| !! | AGGTTTTAACCAAAGCACAA+AGG | - | chr2.1:3356108-3356127 | MS.gene47817:intron | 35.0% |
| !!! | TTTGTAAGGAGCCTGTTTTT+TGG | - | chr2.1:3357073-3357092 | MS.gene47817:intron | 35.0% |
| AAAGGAGAGTTTGTCAGGAT+TGG | + | chr2.1:3357483-3357502 | None:intergenic | 40.0% | |
| AACTAGAGAATGCTCTAGTG+AGG | + | chr2.1:3357324-3357343 | None:intergenic | 40.0% | |
| AAGCAAGCAAGTAGAGAAGT+TGG | - | chr2.1:3360877-3360896 | MS.gene47817:intron | 40.0% | |
| AAGTCCAAACATTGTCAGGA+AGG | + | chr2.1:3359747-3359766 | None:intergenic | 40.0% | |
| AATCAAATCAGTAGAGGCAG+AGG | - | chr2.1:3356715-3356734 | MS.gene47817:intron | 40.0% | |
| AATCACAGACTCACCATATG+CGG | + | chr2.1:3358825-3358844 | None:intergenic | 40.0% | |
| ACAAAGTTGGGTCAACTACA+TGG | + | chr2.1:3356850-3356869 | None:intergenic | 40.0% | |
| ACTAGAGAATGCTCTAGTGA+GGG | + | chr2.1:3357323-3357342 | None:intergenic | 40.0% | |
| ACTTCTCAACCTTATTCTGG+CGG | - | chr2.1:3356383-3356402 | MS.gene47817:CDS | 40.0% | |
| AGTCCAAACATTGTCAGGAA+GGG | + | chr2.1:3359746-3359765 | None:intergenic | 40.0% | |
| ATATGGGCAAGAAAAAGGAC+CGG | - | chr2.1:3358392-3358411 | MS.gene47817:intron | 40.0% | |
| ATCCCGAGAAAATTACCAGT+AGG | + | chr2.1:3358776-3358795 | None:intergenic | 40.0% | |
| ATGTAGTTGACCCAACTTTG+TGG | - | chr2.1:3356849-3356868 | MS.gene47817:CDS | 40.0% | |
| CAACATTTATCAGTGCCTTG+AGG | + | chr2.1:3357006-3357025 | None:intergenic | 40.0% | |
| CAACATTTATCGGTGCATTG+AGG | + | chr2.1:3358288-3358307 | None:intergenic | 40.0% | |
| CATACGGTTCTCACATTATC+AGG | + | chr2.1:3360096-3360115 | None:intergenic | 40.0% | |
| CCATATGCGGTATATCTTTC+AGG | + | chr2.1:3358812-3358831 | None:intergenic | 40.0% | |
| CCTGAAAGATATACCGCATA+TGG | - | chr2.1:3358809-3358828 | MS.gene47817:CDS | 40.0% | |
| CGATGAATTAGAGCGAGAAA+AGG | - | chr2.1:3356055-3356074 | MS.gene47817:intron | 40.0% | |
| CTTACTCACTTCAACGAACT+GGG | + | chr2.1:3358717-3358736 | None:intergenic | 40.0% | |
| CTTCAAGTCCAAACATTGTC+AGG | + | chr2.1:3359751-3359770 | None:intergenic | 40.0% | |
| GAAACCGTTATGCAATTTCC+TGG | - | chr2.1:3359651-3359670 | MS.gene47817:intron | 40.0% | |
| GACATGAGGTTCACATGATT+GGG | - | chr2.1:3358552-3358571 | MS.gene47817:CDS | 40.0% | |
| GGAGAATTGCAGTCAAAATG+TGG | - | chr2.1:3357727-3357746 | MS.gene47817:CDS | 40.0% | |
| GGTGCATCATAGAAACTGTT+AGG | + | chr2.1:3357515-3357534 | None:intergenic | 40.0% | |
| GTGCATTGAGGTCATCATTT+GGG | + | chr2.1:3358276-3358295 | None:intergenic | 40.0% | |
| GTTCGCAAAGACAAAAACCT+AGG | + | chr2.1:3359538-3359557 | None:intergenic | 40.0% | |
| TATCCAGATATCAAGCCTAC+TGG | - | chr2.1:3358758-3358777 | MS.gene47817:intron | 40.0% | |
| TATGTCCTGAATTGTGGTTG+CGG | - | chr2.1:3357810-3357829 | MS.gene47817:intron | 40.0% | |
| TGTAGTTGACCCAACTTTGT+GGG | - | chr2.1:3356850-3356869 | MS.gene47817:CDS | 40.0% | |
| TTACCAGTAGGCTTGATATC+TGG | + | chr2.1:3358764-3358783 | None:intergenic | 40.0% | |
| TTAGCAGCTTCAGCAAAATG+AGG | + | chr2.1:3356242-3356261 | None:intergenic | 40.0% | |
| TTCTGCTACTAGTATGTGCT+TGG | - | chr2.1:3358012-3358031 | MS.gene47817:CDS | 40.0% | |
| TTCTTGAATTGTGGACCTCA+AGG | - | chr2.1:3356988-3357007 | MS.gene47817:intron | 40.0% | |
| TTGCTTATCTGCTTATGCCT+TGG | - | chr2.1:3360778-3360797 | MS.gene47817:intron | 40.0% | |
| TTGTTCTTGGTTATGCACCT+TGG | - | chr2.1:3356192-3356211 | MS.gene47817:intron | 40.0% | |
| TTTGAACAGCAAGAAGGATG+TGG | - | chr2.1:3360476-3360495 | MS.gene47817:intron | 40.0% | |
| ! | AAGCCTTATCCCACAAAGTT+GGG | + | chr2.1:3356862-3356881 | None:intergenic | 40.0% |
| ! | AGCAAGAACTTTCAAGTCGA+AGG | - | chr2.1:3359599-3359618 | MS.gene47817:intron | 40.0% |
| ! | AGCCTACTGGTAATTTTCTC+GGG | - | chr2.1:3358771-3358790 | MS.gene47817:intron | 40.0% |
| ! | AGGTCATCATTTGGGATAAC+AGG | + | chr2.1:3358268-3358287 | None:intergenic | 40.0% |
| ! | CATCATTTGGGATAACAGGT+AGG | + | chr2.1:3358264-3358283 | None:intergenic | 40.0% |
| ! | GGATGAGAAATGACTAGTTG+GGG | - | chr2.1:3356585-3356604 | MS.gene47817:intron | 40.0% |
| ! | GGGAGGTTAGTCCTATTTAT+AGG | - | chr2.1:3357380-3357399 | MS.gene47817:CDS | 40.0% |
| ! | GTTCTTGCTACTTCTTGAAG+TGG | + | chr2.1:3359588-3359607 | None:intergenic | 40.0% |
| ! | TATCAACAGCAAAGCATCCA+GGG | + | chr2.1:3359443-3359462 | None:intergenic | 40.0% |
| ! | TGATGTCGCTTCTTGAATTG+TGG | - | chr2.1:3356979-3356998 | MS.gene47817:intron | 40.0% |
| ! | TGGCGGGCATAAACAAAATT+TGG | + | chr2.1:3359117-3359136 | None:intergenic | 40.0% |
| ! | TTATCAACAGCAAAGCATCC+AGG | + | chr2.1:3359444-3359463 | None:intergenic | 40.0% |
| !! | AGGAGTTTTGTGATTGTTCC+AGG | - | chr2.1:3358357-3358376 | MS.gene47817:intron | 40.0% |
| !! | GGAGTTTTGTGATTGTTCCA+GGG | - | chr2.1:3358358-3358377 | MS.gene47817:intron | 40.0% |
| !! | TGTGAAATCTTCTGAAGCAG+AGG | - | chr2.1:3356088-3356107 | MS.gene47817:intron | 40.0% |
| !!! | CAAGAAGGATGTGGTTTTAG+AGG | - | chr2.1:3360485-3360504 | MS.gene47817:intron | 40.0% |
| !!! | CACACTTTTTTATGCGTCCA+AGG | - | chr2.1:3357956-3357975 | MS.gene47817:CDS | 40.0% |
| !!! | CCTTGGTTGATTTTAACTCG+CGG | - | chr2.1:3360795-3360814 | MS.gene47817:intron | 40.0% |
| !!! | TTCTCTTGTTTTGGCTAAGG+TGG | - | chr2.1:3356283-3356302 | MS.gene47817:intron | 40.0% |
| AACCTCCCGTTAGGATGATT+AGG | + | chr2.1:3357368-3357387 | None:intergenic | 45.0% | |
| AAGCCCTTCCTGACAATGTT+TGG | - | chr2.1:3359740-3359759 | MS.gene47817:intron | 45.0% | |
| AAGTACAGAGAAAGCAGCAG+AGG | - | chr2.1:3358433-3358452 | MS.gene47817:intron | 45.0% | |
| AATAGGACTAACCTCCCGTT+AGG | + | chr2.1:3357377-3357396 | None:intergenic | 45.0% | |
| AGCGTTTCGTTATAGAAGCG+AGG | + | chr2.1:3361223-3361242 | None:intergenic | 45.0% | |
| AGTATGTGTGTGCTCAGTGT+TGG | - | chr2.1:3357603-3357622 | MS.gene47817:intron | 45.0% | |
| ATAGTGACCTGATGCTTGAC+TGG | + | chr2.1:3359328-3359347 | None:intergenic | 45.0% | |
| ATGTGAACCTCATGTCGACA+TGG | + | chr2.1:3358548-3358567 | None:intergenic | 45.0% | |
| ATTCTTCATATTCAGGGCCC+TGG | + | chr2.1:3358664-3358683 | None:intergenic | 45.0% | |
| CAACTTTGTGGGATAAGGCT+TGG | - | chr2.1:3356861-3356880 | MS.gene47817:intron | 45.0% | |
| CCAGTTCGTTGAAGTGAGTA+AGG | - | chr2.1:3358715-3358734 | MS.gene47817:intron | 45.0% | |
| CCGCGAGTTAAAATCAACCA+AGG | + | chr2.1:3360798-3360817 | None:intergenic | 45.0% | |
| CCTTACTCACTTCAACGAAC+TGG | + | chr2.1:3358718-3358737 | None:intergenic | 45.0% | |
| CGACATGAGGTTCACATGAT+TGG | - | chr2.1:3358551-3358570 | MS.gene47817:CDS | 45.0% | |
| CTAGAGAATGCTCTAGTGAG+GGG | + | chr2.1:3357322-3357341 | None:intergenic | 45.0% | |
| CTATAGTAGGACAGACACCT+TGG | + | chr2.1:3360148-3360167 | None:intergenic | 45.0% | |
| GAGCGAGAAAAGGATCATGA+TGG | - | chr2.1:3356065-3356084 | MS.gene47817:intron | 45.0% | |
| GGGACTTCTCAACCTTATTC+TGG | - | chr2.1:3356380-3356399 | MS.gene47817:CDS | 45.0% | |
| GGTGCATTGAGGTCATCATT+TGG | + | chr2.1:3358277-3358296 | None:intergenic | 45.0% | |
| GTTCACATGATTGGGAGTTG+TGG | - | chr2.1:3358560-3358579 | MS.gene47817:CDS | 45.0% | |
| TAGTGACCTGATGCTTGACT+GGG | + | chr2.1:3359327-3359346 | None:intergenic | 45.0% | |
| TATCCGAATAACAGGCGTAC+CGG | + | chr2.1:3358414-3358433 | None:intergenic | 45.0% | |
| TCCTCACAGTTGAAACACCA+AGG | + | chr2.1:3360854-3360873 | None:intergenic | 45.0% | |
| TCTGCACTTCTTGAACACCA+AGG | + | chr2.1:3356212-3356231 | None:intergenic | 45.0% | |
| TGACCCAACTTTGTGGGATA+AGG | - | chr2.1:3356856-3356875 | MS.gene47817:intron | 45.0% | |
| TGCAACCTTAATCCTTGTCG+CGG | - | chr2.1:3358169-3358188 | MS.gene47817:intron | 45.0% | |
| TGCAGATGGAGCTTTCACAT+TGG | - | chr2.1:3359216-3359235 | MS.gene47817:intron | 45.0% | |
| TTCCTAATCATCCTAACGGG+AGG | - | chr2.1:3357363-3357382 | MS.gene47817:CDS | 45.0% | |
| TTTGCCATGACCTCAGTACT+TGG | + | chr2.1:3359183-3359202 | None:intergenic | 45.0% | |
| ! | AACATCGACACCAAGTACTG+AGG | - | chr2.1:3359170-3359189 | MS.gene47817:intron | 45.0% |
| ! | ACTAGCTTCAGTCTGCAAGT+TGG | + | chr2.1:3360418-3360437 | None:intergenic | 45.0% |
| ! | ACTCAATGGCACCCTGATTT+TGG | - | chr2.1:3361171-3361190 | MS.gene47817:CDS | 45.0% |
| ! | ATCAACAGCAAAGCATCCAG+GGG | + | chr2.1:3359442-3359461 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACAAAGT+TGG | + | chr2.1:3356863-3356882 | None:intergenic | 45.0% |
| ! | GGACACATGTGTCATTGCTT+GGG | + | chr2.1:3360670-3360689 | None:intergenic | 45.0% |
| ! | TGGACACATGTGTCATTGCT+TGG | + | chr2.1:3360671-3360690 | None:intergenic | 45.0% |
| !! | ACCTTGGTGTTTCAACTGTG+AGG | - | chr2.1:3360850-3360869 | MS.gene47817:intron | 45.0% |
| !! | CAGTACTTGGTGTCGATGTT+TGG | + | chr2.1:3359170-3359189 | None:intergenic | 45.0% |
| !! | GGGTGCCATTGAGTAATTAC+CGG | + | chr2.1:3361165-3361184 | None:intergenic | 45.0% |
| !! | GTACAACTGAAAGCACTCCT+TGG | + | chr2.1:3357976-3357995 | None:intergenic | 45.0% |
| !! | TTTGGTTTGCTTGACGCGAT+AGG | - | chr2.1:3356564-3356583 | MS.gene47817:intron | 45.0% |
| !! | TTTTGAGTGTCACCTGCTGA+AGG | - | chr2.1:3359978-3359997 | MS.gene47817:intron | 45.0% |
| !!! | CTTGTTTTGGCTAAGGTGGA+TGG | - | chr2.1:3356287-3356306 | MS.gene47817:intron | 45.0% |
| !!! | TTATTTTTATTAGAATTTTT+TGG | - | chr2.1:3356546-3356565 | MS.gene47817:intron | 5.0% |
| AAAAACCTGGATGTCCACCC+TGG | - | chr2.1:3358210-3358229 | MS.gene47817:intron | 50.0% | |
| AACCTTGCACTCAAGCCTCA+AGG | - | chr2.1:3357287-3357306 | MS.gene47817:intron | 50.0% | |
| AACGTCTGCAACCATGAACC+AGG | + | chr2.1:3358231-3358250 | None:intergenic | 50.0% | |
| AAGGTCCGCAACCACAATTC+AGG | + | chr2.1:3357818-3357837 | None:intergenic | 50.0% | |
| ACCTTGCACTCAAGCCTCAA+GGG | - | chr2.1:3357288-3357307 | MS.gene47817:intron | 50.0% | |
| ACGTCTGCAACCATGAACCA+GGG | + | chr2.1:3358230-3358249 | None:intergenic | 50.0% | |
| ATCCAGGGGCAATCAACATG+TGG | + | chr2.1:3359428-3359447 | None:intergenic | 50.0% | |
| GACAGACACCTTGGATGCAT+AGG | + | chr2.1:3360139-3360158 | None:intergenic | 50.0% | |
| GCAGTGAAACCGCCAGAATA+AGG | + | chr2.1:3356395-3356414 | None:intergenic | 50.0% | |
| TGGCTAAGGTGGATGGTGAT+AGG | - | chr2.1:3356294-3356313 | MS.gene47817:intron | 50.0% | |
| TTGTCAGGAAGGGCTTTGCA+AGG | + | chr2.1:3359736-3359755 | None:intergenic | 50.0% | |
| !! | AGAGGTACCATGTCGACATG+AGG | - | chr2.1:3358538-3358557 | MS.gene47817:CDS | 50.0% |
| !! | GACACCAAGTACTGAGGTCA+TGG | - | chr2.1:3359176-3359195 | MS.gene47817:intron | 50.0% |
| ATGAACCAGGGTGGACATCC+AGG | + | chr2.1:3358218-3358237 | None:intergenic | 55.0% | |
| CCACACCGCGACAAGGATTA+AGG | + | chr2.1:3358177-3358196 | None:intergenic | 55.0% | |
| CCTTAATCCTTGTCGCGGTG+TGG | - | chr2.1:3358174-3358193 | MS.gene47817:intron | 55.0% | |
| CTCAAGCCCAGTCAAGCATC+AGG | - | chr2.1:3359318-3359337 | MS.gene47817:intron | 55.0% | |
| GGACCGGTACGCCTGTTATT+CGG | - | chr2.1:3358408-3358427 | MS.gene47817:intron | 55.0% | |
| TCCCTTGAGGCTTGAGTGCA+AGG | + | chr2.1:3357292-3357311 | None:intergenic | 55.0% | |
| TCTGCAACCATGAACCAGGG+TGG | + | chr2.1:3358227-3358246 | None:intergenic | 55.0% | |
| TGGATGTCCACCCTGGTTCA+TGG | - | chr2.1:3358217-3358236 | MS.gene47817:intron | 55.0% | |
| ! | TCTAGAACCACACCGCGACA+AGG | + | chr2.1:3358184-3358203 | None:intergenic | 55.0% |
| ! | TGCCACATGTTGATTGCCCC+TGG | - | chr2.1:3359423-3359442 | MS.gene47817:intron | 55.0% |
| !! | GAGGGGAGAGTGCTCCCTTG+AGG | + | chr2.1:3357305-3357324 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 3355945 | 3361350 | 3355945 | ID=MS.gene47817 |
| chr2.1 | mRNA | 3355945 | 3361350 | 3355945 | ID=MS.gene47817.t1;Parent=MS.gene47817 |
| chr2.1 | exon | 3360881 | 3361350 | 3360881 | ID=MS.gene47817.t1.exon1;Parent=MS.gene47817.t1 |
| chr2.1 | CDS | 3360881 | 3361350 | 3360881 | ID=cds.MS.gene47817.t1;Parent=MS.gene47817.t1 |
| chr2.1 | exon | 3358787 | 3358916 | 3358787 | ID=MS.gene47817.t1.exon2;Parent=MS.gene47817.t1 |
| chr2.1 | CDS | 3358787 | 3358916 | 3358787 | ID=cds.MS.gene47817.t1;Parent=MS.gene47817.t1 |
| chr2.1 | exon | 3358465 | 3358630 | 3358465 | ID=MS.gene47817.t1.exon3;Parent=MS.gene47817.t1 |
| chr2.1 | CDS | 3358465 | 3358630 | 3358465 | ID=cds.MS.gene47817.t1;Parent=MS.gene47817.t1 |
| chr2.1 | exon | 3357956 | 3358074 | 3357956 | ID=MS.gene47817.t1.exon4;Parent=MS.gene47817.t1 |
| chr2.1 | CDS | 3357956 | 3358074 | 3357956 | ID=cds.MS.gene47817.t1;Parent=MS.gene47817.t1 |
| chr2.1 | exon | 3357675 | 3357755 | 3357675 | ID=MS.gene47817.t1.exon5;Parent=MS.gene47817.t1 |
| chr2.1 | CDS | 3357675 | 3357755 | 3357675 | ID=cds.MS.gene47817.t1;Parent=MS.gene47817.t1 |
| chr2.1 | exon | 3357508 | 3357597 | 3357508 | ID=MS.gene47817.t1.exon6;Parent=MS.gene47817.t1 |
| chr2.1 | CDS | 3357508 | 3357597 | 3357508 | ID=cds.MS.gene47817.t1;Parent=MS.gene47817.t1 |
| chr2.1 | exon | 3357347 | 3357418 | 3357347 | ID=MS.gene47817.t1.exon7;Parent=MS.gene47817.t1 |
| chr2.1 | CDS | 3357347 | 3357418 | 3357347 | ID=cds.MS.gene47817.t1;Parent=MS.gene47817.t1 |
| chr2.1 | exon | 3357194 | 3357262 | 3357194 | ID=MS.gene47817.t1.exon8;Parent=MS.gene47817.t1 |
| chr2.1 | CDS | 3357194 | 3357262 | 3357194 | ID=cds.MS.gene47817.t1;Parent=MS.gene47817.t1 |
| chr2.1 | exon | 3356789 | 3356869 | 3356789 | ID=MS.gene47817.t1.exon9;Parent=MS.gene47817.t1 |
| chr2.1 | CDS | 3356789 | 3356869 | 3356789 | ID=cds.MS.gene47817.t1;Parent=MS.gene47817.t1 |
| chr2.1 | exon | 3356319 | 3356453 | 3356319 | ID=MS.gene47817.t1.exon10;Parent=MS.gene47817.t1 |
| chr2.1 | CDS | 3356319 | 3356453 | 3356319 | ID=cds.MS.gene47817.t1;Parent=MS.gene47817.t1 |
| chr2.1 | exon | 3356131 | 3356184 | 3356131 | ID=MS.gene47817.t1.exon11;Parent=MS.gene47817.t1 |
| chr2.1 | CDS | 3356131 | 3356184 | 3356131 | ID=cds.MS.gene47817.t1;Parent=MS.gene47817.t1 |
| chr2.1 | exon | 3355945 | 3356040 | 3355945 | ID=MS.gene47817.t1.exon12;Parent=MS.gene47817.t1 |
| chr2.1 | CDS | 3355945 | 3356040 | 3355945 | ID=cds.MS.gene47817.t1;Parent=MS.gene47817.t1 |
| Gene Sequence |
| Protein sequence |
