Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022334.t1 | RHN68735.1 | 97.5 | 476 | 12 | 0 | 1 | 476 | 256 | 731 | 2.30E-277 | 964.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022334.t1 | Q9FML2 | 73.5 | 472 | 115 | 4 | 9 | 475 | 3 | 469 | 4.5e-205 | 715.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022334.t1 | G7J4T5 | 97.5 | 476 | 12 | 0 | 1 | 476 | 1 | 476 | 1.7e-277 | 964.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene074335 | MS.gene022334 | PPI |
| MS.gene78117 | MS.gene022334 | PPI |
| MS.gene022334 | MS.gene000865 | PPI |
| MS.gene44717 | MS.gene022334 | PPI |
| MS.gene38997 | MS.gene022334 | PPI |
| MS.gene022334 | MS.gene31296 | PPI |
| MS.gene056316 | MS.gene022334 | PPI |
| MS.gene32239 | MS.gene022334 | PPI |
| MS.gene86222 | MS.gene022334 | PPI |
| MS.gene68716 | MS.gene022334 | PPI |
| MS.gene022334 | MS.gene49890 | PPI |
| MS.gene44289 | MS.gene022334 | PPI |
| MS.gene022334 | MS.gene007856 | PPI |
| MS.gene08875 | MS.gene022334 | PPI |
| MS.gene08629 | MS.gene022334 | PPI |
| MS.gene022334 | MS.gene027729 | PPI |
| MS.gene022334 | MS.gene058947 | PPI |
| MS.gene014181 | MS.gene022334 | PPI |
| MS.gene68113 | MS.gene022334 | PPI |
| MS.gene028725 | MS.gene022334 | PPI |
| MS.gene29165 | MS.gene022334 | PPI |
| MS.gene022334 | MS.gene063067 | PPI |
| MS.gene022334 | MS.gene032322 | PPI |
| MS.gene021991 | MS.gene022334 | PPI |
| MS.gene007656 | MS.gene022334 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022334.t1 | MTR_3g077160 | 99.370 | 476 | 3 | 0 | 1 | 476 | 1 | 476 | 0.0 | 988 |
| MS.gene022334.t1 | MTR_3g118535 | 63.739 | 444 | 147 | 3 | 13 | 456 | 5 | 434 | 0.0 | 592 |
| MS.gene022334.t1 | MTR_5g004640 | 68.579 | 401 | 121 | 2 | 11 | 411 | 7 | 402 | 0.0 | 587 |
| MS.gene022334.t1 | MTR_4g055080 | 54.884 | 430 | 181 | 3 | 25 | 445 | 4 | 429 | 7.64e-172 | 490 |
| MS.gene022334.t1 | MTR_4g055080 | 55.392 | 408 | 169 | 3 | 47 | 445 | 1 | 404 | 1.54e-162 | 466 |
| MS.gene022334.t1 | MTR_3g077120 | 92.063 | 189 | 15 | 0 | 1 | 189 | 1 | 189 | 3.70e-126 | 365 |
| MS.gene022334.t1 | MTR_2g087270 | 33.516 | 182 | 111 | 3 | 161 | 332 | 154 | 335 | 3.56e-24 | 104 |
| MS.gene022334.t1 | MTR_4g109500 | 26.748 | 329 | 216 | 10 | 19 | 331 | 10 | 329 | 8.65e-24 | 105 |
| MS.gene022334.t1 | MTR_4g109500 | 26.748 | 329 | 216 | 10 | 19 | 331 | 10 | 329 | 8.73e-24 | 105 |
| MS.gene022334.t1 | MTR_4g111985 | 25.723 | 311 | 213 | 8 | 45 | 349 | 257 | 555 | 1.87e-20 | 95.1 |
| MS.gene022334.t1 | MTR_4g111985 | 25.723 | 311 | 213 | 8 | 45 | 349 | 218 | 516 | 3.52e-20 | 94.0 |
| MS.gene022334.t1 | MTR_8g093800 | 33.333 | 141 | 91 | 2 | 161 | 299 | 198 | 337 | 2.52e-18 | 87.4 |
| MS.gene022334.t1 | MTR_4g111985 | 26.481 | 287 | 188 | 9 | 45 | 322 | 218 | 490 | 1.14e-17 | 85.9 |
| MS.gene022334.t1 | MTR_1g016440 | 25.407 | 307 | 202 | 10 | 27 | 324 | 32 | 320 | 5.18e-17 | 82.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene022334.t1 | AT5G63110 | 74.576 | 472 | 110 | 5 | 9 | 475 | 3 | 469 | 0.0 | 721 |
| MS.gene022334.t1 | AT4G38130 | 69.157 | 415 | 121 | 3 | 10 | 422 | 2 | 411 | 0.0 | 599 |
| MS.gene022334.t1 | AT4G38130 | 69.157 | 415 | 121 | 3 | 10 | 422 | 2 | 411 | 0.0 | 598 |
| MS.gene022334.t1 | AT5G35600 | 59.901 | 404 | 156 | 2 | 21 | 422 | 5 | 404 | 7.93e-177 | 502 |
| MS.gene022334.t1 | AT3G44680 | 55.059 | 425 | 178 | 5 | 25 | 440 | 4 | 424 | 8.01e-171 | 487 |
| MS.gene022334.t1 | AT3G44490 | 38.710 | 155 | 87 | 2 | 294 | 440 | 2 | 156 | 5.25e-32 | 120 |
| MS.gene022334.t1 | AT5G61060 | 27.019 | 322 | 213 | 9 | 25 | 331 | 24 | 338 | 1.87e-24 | 107 |
| MS.gene022334.t1 | AT3G18520 | 31.795 | 195 | 128 | 4 | 161 | 350 | 276 | 470 | 3.67e-24 | 105 |
| MS.gene022334.t1 | AT3G18520 | 31.795 | 195 | 128 | 4 | 161 | 350 | 276 | 470 | 4.24e-24 | 105 |
| MS.gene022334.t1 | AT3G18520 | 31.795 | 195 | 128 | 4 | 161 | 350 | 276 | 470 | 4.52e-24 | 105 |
| MS.gene022334.t1 | AT1G08460 | 27.052 | 329 | 202 | 8 | 22 | 332 | 18 | 326 | 1.13e-23 | 102 |
| MS.gene022334.t1 | AT5G61060 | 26.687 | 326 | 213 | 10 | 25 | 331 | 24 | 342 | 1.32e-22 | 101 |
| MS.gene022334.t1 | AT5G61070 | 25.776 | 322 | 217 | 9 | 25 | 331 | 57 | 371 | 1.39e-21 | 98.6 |
| MS.gene022334.t1 | AT3G44660 | 34.194 | 155 | 78 | 3 | 294 | 440 | 2 | 140 | 4.27e-21 | 89.7 |
| MS.gene022334.t1 | AT1G08460 | 27.698 | 278 | 168 | 7 | 22 | 286 | 18 | 275 | 1.23e-20 | 93.2 |
| MS.gene022334.t1 | AT3G18520 | 32.353 | 170 | 110 | 4 | 161 | 325 | 276 | 445 | 4.59e-20 | 92.8 |
| MS.gene022334.t1 | AT4G33470 | 32.812 | 128 | 83 | 2 | 161 | 286 | 201 | 327 | 1.36e-16 | 82.0 |
| MS.gene022334.t1 | AT5G26040 | 25.817 | 306 | 202 | 11 | 27 | 324 | 73 | 361 | 1.12e-15 | 79.0 |
Find 138 sgRNAs with CRISPR-Local
Find 377 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGAGTATTATGAATATTT+TGG | 0.162867 | 3.4:+74126868 | MS.gene022334:CDS |
| GGTGATTTCTTCCCTGGAAC+TGG | 0.198514 | 3.4:+74126376 | MS.gene022334:CDS |
| TCATCCATTCCATCATTTAA+TGG | 0.215305 | 3.4:-74126451 | None:intergenic |
| TAAGAAGTACAAACCTCTTC+TGG | 0.219614 | 3.4:-74127994 | None:intergenic |
| CAATGTTCCTCTAATGGTCT+TGG | 0.269434 | 3.4:+74126645 | MS.gene022334:CDS |
| CCATATCCTTGGGTGTGTTT+AGG | 0.282433 | 3.4:-74126933 | None:intergenic |
| GCTTCTGCTGGTGGATCTAT+TGG | 0.286027 | 3.4:+74124985 | MS.gene022334:CDS |
| GTCTTTCAATGTTCCTCTAA+TGG | 0.288168 | 3.4:+74126639 | MS.gene022334:CDS |
| TAAACTTGAGCTCCTTATAT+TGG | 0.291327 | 3.4:-74128166 | None:intergenic |
| CCACTCCACAACTGACGTTT+TGG | 0.296573 | 3.4:-74128105 | None:intergenic |
| TATTCATAATACTCATTATA+TGG | 0.300885 | 3.4:-74126862 | None:intergenic |
| TTGAGCTTCTCAAAGTTCAT+AGG | 0.301104 | 3.4:+74125133 | MS.gene022334:CDS |
| GCTAAGAAAGCTGAAGCTTC+TGG | 0.305922 | 3.4:+74125075 | MS.gene022334:CDS |
| TCTGGGACTTCTGCAGTTGA+TGG | 0.307398 | 3.4:-74127976 | None:intergenic |
| CCTAAACACACCCAAGGATA+TGG | 0.316180 | 3.4:+74126933 | MS.gene022334:CDS |
| CGGATACGATGGGGTTTCAT+TGG | 0.337833 | 3.4:-74124724 | None:intergenic |
| TCCTCTAATGGTCTTGGGTG+GGG | 0.342028 | 3.4:+74126651 | MS.gene022334:CDS |
| TCTTTAATATGCCCAGTTCC+AGG | 0.354452 | 3.4:-74126388 | None:intergenic |
| TCCAATGGGTAGCGGCGAAA+TGG | 0.361499 | 3.4:+74124585 | None:intergenic |
| ATGCTGATATTGCTATCAAT+TGG | 0.364214 | 3.4:+74125034 | MS.gene022334:CDS |
| GATCTATTGGTGCTGCTGTT+AGG | 0.365526 | 3.4:+74124998 | MS.gene022334:CDS |
| TATGTTAATGACATTGTTCT+TGG | 0.365568 | 3.4:+74125105 | MS.gene022334:CDS |
| AATGTTCCTCTAATGGTCTT+GGG | 0.379258 | 3.4:+74126646 | MS.gene022334:CDS |
| CCGTTCTGCCAGGCTTCTGC+TGG | 0.379839 | 3.4:+74124973 | MS.gene022334:CDS |
| AAGATGAGAAGGCCAATATA+AGG | 0.387878 | 3.4:+74128154 | MS.gene022334:CDS |
| AAGTTTGGTGATTTCTTCCC+TGG | 0.389907 | 3.4:+74126370 | MS.gene022334:CDS |
| CCTCTAATGGTCTTGGGTGG+GGG | 0.391223 | 3.4:+74126652 | MS.gene022334:CDS |
| AAAGACACTGGTGTGGGCCC+TGG | 0.397372 | 3.4:+74126406 | MS.gene022334:CDS |
| TTTAGGTTCTCCATGTTGTT+TGG | 0.397924 | 3.4:-74126916 | None:intergenic |
| CGTTTCGCCGGAGATTGTTT+CGG | 0.398779 | 3.4:+74124873 | MS.gene022334:CDS |
| TTATATGGCAACTTATTACT+TGG | 0.400243 | 3.4:-74126847 | None:intergenic |
| TGCACACCAGGCTTAACTTC+TGG | 0.406949 | 3.4:-74129496 | None:intergenic |
| CAGACTGCCTTCGTTTCCTT+AGG | 0.423655 | 3.4:+74126617 | MS.gene022334:CDS |
| CCAATGGGTAGCGGCGAAAT+GGG | 0.431316 | 3.4:+74124586 | None:intergenic |
| TCGACATGAAGTGTATAGTC+TGG | 0.432974 | 3.4:-74126892 | None:intergenic |
| ATAATTCGCACTCTCATTAT+CGG | 0.436938 | 3.4:+74124896 | MS.gene022334:CDS |
| CCGTCCTTTCGCCGCTGCGC+CGG | 0.438153 | 3.4:+74124801 | MS.gene022334:CDS |
| AAGAAGTACAAACCTCTTCT+GGG | 0.438301 | 3.4:-74127993 | None:intergenic |
| CTGATTCTCTGTCCGGTGAC+AGG | 0.444491 | 3.4:+74126560 | MS.gene022334:CDS |
| TTCTCTGTCCGGTGACAGGT+TGG | 0.444753 | 3.4:+74126564 | MS.gene022334:CDS |
| CAAGTTTAACTTCTCATATG+AGG | 0.448062 | 3.4:+74128181 | MS.gene022334:CDS |
| GTGATTTCTTCCCTGGAACT+GGG | 0.451815 | 3.4:+74126377 | MS.gene022334:CDS |
| GGCGCATCACTTCCTTCAAT+CGG | 0.452538 | 3.4:+74124625 | MS.gene022334:CDS |
| ATTGGCCTTCTCATCTTCAT+CGG | 0.452747 | 3.4:-74128148 | None:intergenic |
| ACTGGGAGCATGAGGAAGTC+TGG | 0.454000 | 3.4:-74127935 | None:intergenic |
| ATGTTAATGACATTGTTCTT+GGG | 0.459037 | 3.4:+74125106 | MS.gene022334:CDS |
| TTGGCCTTCTCATCTTCATC+GGG | 0.463989 | 3.4:-74128147 | None:intergenic |
| CCCATTTCGCCGCTACCCAT+TGG | 0.464766 | 3.4:-74124586 | None:intergenic |
| TTGCTTCAACTTATCTGTGA+AGG | 0.467935 | 3.4:+74126588 | MS.gene022334:CDS |
| ATTGCGTCGGCGCCGATTGA+AGG | 0.476149 | 3.4:-74124637 | None:intergenic |
| TTCCTCTAATGGTCTTGGGT+GGG | 0.478365 | 3.4:+74126650 | MS.gene022334:CDS |
| GGATACGATGGGGTTTCATT+GGG | 0.482053 | 3.4:-74124723 | None:intergenic |
| AAGACACTGGTGTGGGCCCT+GGG | 0.482800 | 3.4:+74126407 | MS.gene022334:CDS |
| CTAAATGTTCCATTAAATGA+TGG | 0.484418 | 3.4:+74126442 | MS.gene022334:CDS |
| CAGGCGCGCAGCAGATATGA+TGG | 0.487795 | 3.4:+74129462 | MS.gene022334:intron |
| CATTGAAGAACAACTGCATC+AGG | 0.488172 | 3.4:-74126532 | None:intergenic |
| TGAGCTTCTCAAAGTTCATA+GGG | 0.489498 | 3.4:+74125134 | MS.gene022334:CDS |
| TTCTGCCAGGCTTCTGCTGG+TGG | 0.491521 | 3.4:+74124976 | MS.gene022334:CDS |
| TGCTGATATTGCTATCAATT+GGG | 0.493745 | 3.4:+74125035 | MS.gene022334:CDS |
| TTTAGAGCATAGTCCTTCCC+AGG | 0.496376 | 3.4:-74126424 | None:intergenic |
| CGAAACAATCTCCGGCGAAA+CGG | 0.497459 | 3.4:-74124872 | None:intergenic |
| CTCATTATCGGCAGTTGAAG+AGG | 0.497951 | 3.4:+74124908 | MS.gene022334:CDS |
| TAGATCCACCAGCAGAAGCC+TGG | 0.503184 | 3.4:-74124981 | None:intergenic |
| CACTGGTGTGGGCCCTGGGA+AGG | 0.503203 | 3.4:+74126411 | MS.gene022334:CDS |
| TGTGGAGCTGATTCTCTGTC+CGG | 0.509809 | 3.4:+74126553 | MS.gene022334:CDS |
| TGAAAACGACGGATATCTTC+CGG | 0.514272 | 3.4:-74124820 | None:intergenic |
| TAGCATGGCGGATGCACACC+AGG | 0.522092 | 3.4:-74129508 | None:intergenic |
| GTGTGCCATGCGGATACGAT+GGG | 0.522435 | 3.4:-74124734 | None:intergenic |
| TACGGAATGTTGCTCGCTGT+TGG | 0.523272 | 3.4:+74126686 | MS.gene022334:CDS |
| TACGCGACGCTTCATTGCGT+CGG | 0.523824 | 3.4:-74124650 | None:intergenic |
| TTGCTATCAATTGGGCTGGT+GGG | 0.526308 | 3.4:+74125043 | MS.gene022334:CDS |
| TCTCTGTCCGGTGACAGGTT+GGG | 0.534862 | 3.4:+74126565 | MS.gene022334:CDS |
| ATTGATGTCCACCACGGAGA+TGG | 0.535310 | 3.4:+74126295 | MS.gene022334:CDS |
| GTTCCTCTAATGGTCTTGGG+TGG | 0.536209 | 3.4:+74126649 | MS.gene022334:CDS |
| GTTTCTCTCTACCGTTTCGC+CGG | 0.541327 | 3.4:+74124861 | MS.gene022334:CDS |
| TGCTTCAACTTATCTGTGAA+GGG | 0.544303 | 3.4:+74126589 | MS.gene022334:CDS |
| TGTTCCATTAAATGATGGAA+TGG | 0.544886 | 3.4:+74126447 | MS.gene022334:CDS |
| GATATTGCTATCAATTGGGC+TGG | 0.547091 | 3.4:+74125039 | MS.gene022334:CDS |
| CGACATGAAGTGTATAGTCT+GGG | 0.547977 | 3.4:-74126891 | None:intergenic |
| CTTTAATATGCCCAGTTCCA+GGG | 0.549835 | 3.4:-74126387 | None:intergenic |
| GACAGCCGTAGCAGTAGGAG+TGG | 0.550022 | 3.4:+74126822 | MS.gene022334:intron |
| GTTGATGGTGTTGTCTGAAA+AGG | 0.556815 | 3.4:-74127961 | None:intergenic |
| TAGTAATAATCACCGATGCT+TGG | 0.566387 | 3.4:-74124688 | None:intergenic |
| TCTTCCGGCGCAGCGGCGAA+AGG | 0.566477 | 3.4:-74124805 | None:intergenic |
| GATAAGCCAGAAGTTAAGCC+TGG | 0.566789 | 3.4:+74129490 | MS.gene022334:CDS |
| GAAGAGGTTTAATGTTGGTG+AGG | 0.566822 | 3.4:+74124924 | MS.gene022334:CDS |
| TGTTGTCTGAAAAGGAGCAC+TGG | 0.567341 | 3.4:-74127953 | None:intergenic |
| CCGGCGCAGCGGCGAAAGGA+CGG | 0.572675 | 3.4:-74124801 | None:intergenic |
| ATTGCTATCAATTGGGCTGG+TGG | 0.572810 | 3.4:+74125042 | MS.gene022334:CDS |
| CATATTAAAGACACTGGTGT+GGG | 0.574798 | 3.4:+74126400 | MS.gene022334:CDS |
| CACTACTGATCGAGTGATGA+CGG | 0.577875 | 3.4:+74126336 | MS.gene022334:CDS |
| GAGGAACATTGAAAGACCTA+AGG | 0.578248 | 3.4:-74126633 | None:intergenic |
| TGGCTCCACTCCTACTGCTA+CGG | 0.580283 | 3.4:-74126827 | None:intergenic |
| TAAGACCAAAACGTCAGTTG+TGG | 0.581073 | 3.4:+74128100 | MS.gene022334:CDS |
| CCACGGAGATGGCGTTGAGG+AGG | 0.585580 | 3.4:+74126306 | MS.gene022334:CDS |
| AGCATCGGTGATTATTACTA+CGG | 0.586313 | 3.4:+74124691 | MS.gene022334:CDS |
| GATGCTTGGTTCGTAGAAGT+AGG | 0.586398 | 3.4:-74124674 | None:intergenic |
| TGATCCCGATGAAGATGAGA+AGG | 0.591520 | 3.4:+74128143 | MS.gene022334:CDS |
| AACTGCAGAAGTCCCAGAAG+AGG | 0.594278 | 3.4:+74127981 | MS.gene022334:CDS |
| GAAGCAACCCAACCTGTCAC+CGG | 0.597491 | 3.4:-74126572 | None:intergenic |
| TGTGTGCCATGCGGATACGA+TGG | 0.599376 | 3.4:-74124735 | None:intergenic |
| CCAGCAGAAGCCTGGCAGAA+CGG | 0.601021 | 3.4:-74124973 | None:intergenic |
| AAAGGAGCACTGGGAGCATG+AGG | 0.606610 | 3.4:-74127943 | None:intergenic |
| CCTCAACGCCATCTCCGTGG+TGG | 0.607325 | 3.4:-74126303 | None:intergenic |
| GAAGAATTTCCAATGGGTAG+CGG | 0.607581 | 3.4:+74124577 | None:intergenic |
| TGATTGGGTTCAGGAAGATG+AGG | 0.608331 | 3.4:+74128068 | MS.gene022334:intron |
| CTGTTCTATCACTATTAGCA+TGG | 0.611145 | 3.4:-74129523 | None:intergenic |
| GGTGATTATTACTACGGTCA+AGG | 0.613456 | 3.4:+74124697 | MS.gene022334:CDS |
| GGTTAATTTGCATACGACGG+TGG | 0.614286 | 3.4:-74124780 | None:intergenic |
| TGCTCGCTGTTGGTGTTACG+AGG | 0.620146 | 3.4:+74126696 | MS.gene022334:CDS |
| CAGTTGAAGAGGTTTAATGT+TGG | 0.622814 | 3.4:+74124919 | MS.gene022334:CDS |
| TACTTCTACGAACCAAGCAT+CGG | 0.624007 | 3.4:+74124676 | MS.gene022334:CDS |
| GAATTATCCGAAACAATCTC+CGG | 0.624475 | 3.4:-74124880 | None:intergenic |
| CCTCCTCAACGCCATCTCCG+TGG | 0.639372 | 3.4:-74126306 | None:intergenic |
| ACGGATATCTTCCGGCGCAG+CGG | 0.641271 | 3.4:-74124812 | None:intergenic |
| TTAGAGCATAGTCCTTCCCA+GGG | 0.642465 | 3.4:-74126423 | None:intergenic |
| TGAAAGACCTAAGGAAACGA+AGG | 0.645063 | 3.4:-74126624 | None:intergenic |
| GGTTCAGGAAGATGAGGACA+TGG | 0.649107 | 3.4:+74128074 | MS.gene022334:intron |
| ACTGGGCATATTAAAGACAC+TGG | 0.649212 | 3.4:+74126394 | MS.gene022334:CDS |
| CCACCACGGAGATGGCGTTG+AGG | 0.650496 | 3.4:+74126303 | MS.gene022334:CDS |
| GCATATTAAAGACACTGGTG+TGG | 0.651802 | 3.4:+74126399 | MS.gene022334:CDS |
| GAAACCCCATCGTATCCGCA+TGG | 0.656119 | 3.4:+74124729 | MS.gene022334:CDS |
| CCAAAACGTCAGTTGTGGAG+TGG | 0.656576 | 3.4:+74128105 | MS.gene022334:CDS |
| GTTGTCTGAAAAGGAGCACT+GGG | 0.656783 | 3.4:-74127952 | None:intergenic |
| ATGGGTGTAGCTGAGAGCGG+TGG | 0.661640 | 3.4:+74124604 | MS.gene022334:CDS |
| TACGACGGTGGAGAGAGTAG+TGG | 0.662450 | 3.4:-74124768 | None:intergenic |
| TAATGGGACGAAACAGAGCA+CGG | 0.664497 | 3.4:-74126483 | None:intergenic |
| GACGGTTAATTTGCATACGA+CGG | 0.664675 | 3.4:-74124783 | None:intergenic |
| TTCTATCACTATTAGCATGG+CGG | 0.665278 | 3.4:-74129520 | None:intergenic |
| TCATGTCGAACCAAACAACA+TGG | 0.667878 | 3.4:+74126906 | MS.gene022334:CDS |
| GGAGAACCTAAACACACCCA+AGG | 0.676042 | 3.4:+74126927 | MS.gene022334:CDS |
| GAAATGGGTGTAGCTGAGAG+CGG | 0.684927 | 3.4:+74124601 | MS.gene022334:CDS |
| GATGCAGTTGTTCTTCAATG+TGG | 0.687349 | 3.4:+74126535 | MS.gene022334:CDS |
| GTTGATATTGATGTCCACCA+CGG | 0.709895 | 3.4:+74126289 | MS.gene022334:CDS |
| TGTGCCATGCGGATACGATG+GGG | 0.722427 | 3.4:-74124733 | None:intergenic |
| GCTGCTGTTAGGCTCAATCG+TGG | 0.733214 | 3.4:+74125009 | MS.gene022334:CDS |
| AATCATCAGAGTGAAAACGA+CGG | 0.771738 | 3.4:-74124831 | None:intergenic |
| TGATGAGATTGTGTGCCATG+CGG | 0.775032 | 3.4:-74124744 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATTATGATTATTATGAT+GGG | + | chr3.4:74126100-74126119 | MS.gene022334:intron | 10.0% |
| !! | TAATTAGTAAATAACATATT+AGG | - | chr3.4:74126778-74126797 | None:intergenic | 10.0% |
| !! | TATTATTATGATTATTATGA+TGG | + | chr3.4:74126099-74126118 | MS.gene022334:intron | 10.0% |
| !!! | TTAACATATTTTATTTCTTT+TGG | + | chr3.4:74128531-74128550 | MS.gene022334:intron | 10.0% |
| !! | AAAAAATCGCTTATAAAAAA+AGG | - | chr3.4:74127437-74127456 | None:intergenic | 15.0% |
| !! | AAAGCAAAAAAATATATAAC+AGG | - | chr3.4:74128557-74128576 | None:intergenic | 15.0% |
| !! | ATCAAAAAAAATTCTATAGT+GGG | + | chr3.4:74128341-74128360 | MS.gene022334:intron | 15.0% |
| !! | TATTCATAATACTCATTATA+TGG | - | chr3.4:74126865-74126884 | None:intergenic | 15.0% |
| !! | TCAATTCTAATACAATTAAA+AGG | - | chr3.4:74126987-74127006 | None:intergenic | 15.0% |
| !!! | AATGAGTATTATGAATATTT+TGG | + | chr3.4:74126868-74126887 | MS.gene022334:CDS | 15.0% |
| !!! | ATTTCTTAGATTTTAAGAAA+AGG | - | chr3.4:74129427-74129446 | None:intergenic | 15.0% |
| !!! | TATATATTTTTTTGCTTTGT+GGG | + | chr3.4:74128559-74128578 | MS.gene022334:intron | 15.0% |
| !!! | TCAGTAAAATTTCTTTTTTT+GGG | + | chr3.4:74127128-74127147 | MS.gene022334:intron | 15.0% |
| !!! | TTATATATTTTTTTGCTTTG+TGG | + | chr3.4:74128558-74128577 | MS.gene022334:intron | 15.0% |
| !!! | TTCAGTAAAATTTCTTTTTT+TGG | + | chr3.4:74127127-74127146 | MS.gene022334:intron | 15.0% |
| !! | AAAACTTCCATTAAATTTGA+GGG | - | chr3.4:74128640-74128659 | None:intergenic | 20.0% |
| !! | AAATGAATTTGATTACCATT+TGG | + | chr3.4:74129399-74129418 | MS.gene022334:intron | 20.0% |
| !! | ATAAAAAAAGGTTTATTTCC+TGG | - | chr3.4:74127425-74127444 | None:intergenic | 20.0% |
| !! | ATGATAACTGCTTATATATA+AGG | - | chr3.4:74125819-74125838 | None:intergenic | 20.0% |
| !! | CGGGTTAATATTATTTATAT+GGG | - | chr3.4:74128595-74128614 | None:intergenic | 20.0% |
| !! | GATCAAAAAAAATTCTATAG+TGG | + | chr3.4:74128340-74128359 | MS.gene022334:intron | 20.0% |
| !! | GGGTTAATATTATTTATATG+GGG | - | chr3.4:74128594-74128613 | None:intergenic | 20.0% |
| !! | GGTTAATATTATTTATATGG+GGG | - | chr3.4:74128593-74128612 | None:intergenic | 20.0% |
| !! | TATGAGTAAATCATATTCTT+AGG | + | chr3.4:74128787-74128806 | MS.gene022334:intron | 20.0% |
| !! | TCAAAAAAAATTCTATAGTG+GGG | + | chr3.4:74128342-74128361 | MS.gene022334:intron | 20.0% |
| !! | TGTCAAACATAAAAACAAAA+TGG | + | chr3.4:74126141-74126160 | MS.gene022334:intron | 20.0% |
| !! | TGTGATTATAAAATTGTTAG+TGG | + | chr3.4:74125312-74125331 | MS.gene022334:intron | 20.0% |
| !! | TTGTGAATATGTCAAAATAT+TGG | + | chr3.4:74125350-74125369 | MS.gene022334:intron | 20.0% |
| !!! | ATATATTTTTTTGCTTTGTG+GGG | + | chr3.4:74128560-74128579 | MS.gene022334:intron | 20.0% |
| !!! | ATTATTTTAATTTACTCTCC+AGG | + | chr3.4:74127890-74127909 | MS.gene022334:intron | 20.0% |
| !!! | CAGTAAAATTTCTTTTTTTG+GGG | + | chr3.4:74127129-74127148 | MS.gene022334:intron | 20.0% |
| !!! | GAGTGATAACTATATTTTAT+AGG | + | chr3.4:74127669-74127688 | MS.gene022334:intron | 20.0% |
| !!! | TATGTAATGTATTTTAGTCA+TGG | + | chr3.4:74126749-74126768 | MS.gene022334:intron | 20.0% |
| !!! | TGTTTATACCTTGTTTAATT+TGG | + | chr3.4:74125176-74125195 | MS.gene022334:intron | 20.0% |
| !!! | TGTTTTCATATAAGCTATTA+TGG | - | chr3.4:74125761-74125780 | None:intergenic | 20.0% |
| !!! | TTGTTTTTATGTTTGACAAA+AGG | - | chr3.4:74126139-74126158 | None:intergenic | 20.0% |
| !!! | TTTGATTTTAGTTAGTGATT+GGG | + | chr3.4:74128053-74128072 | MS.gene022334:intron | 20.0% |
| !!! | TTTTTGAAAATTATACTTGC+TGG | - | chr3.4:74128828-74128847 | None:intergenic | 20.0% |
| ! | AAAATCAAACCAGATGAAAA+TGG | - | chr3.4:74128042-74128061 | None:intergenic | 25.0% |
| ! | AAATATACACTACATGAAAC+AGG | + | chr3.4:74129443-74129462 | MS.gene022334:intron | 25.0% |
| ! | AAGAATGTCATAAACTATCT+TGG | - | chr3.4:74125514-74125533 | None:intergenic | 25.0% |
| ! | AATAGGGCAAACATATATAT+TGG | - | chr3.4:74129004-74129023 | None:intergenic | 25.0% |
| ! | ACATGAGAACAAAAAATCAA+GGG | - | chr3.4:74127491-74127510 | None:intergenic | 25.0% |
| ! | ACCAAAAACCAAATTAAACA+AGG | - | chr3.4:74125187-74125206 | None:intergenic | 25.0% |
| ! | ATAGTTATACAGTATACATG+TGG | - | chr3.4:74126082-74126101 | None:intergenic | 25.0% |
| ! | ATGTTAATGACATTGTTCTT+GGG | + | chr3.4:74125106-74125125 | MS.gene022334:CDS | 25.0% |
| ! | ATTCTTTATAGTGTAGAAGT+AGG | + | chr3.4:74128257-74128276 | MS.gene022334:intron | 25.0% |
| ! | ATTGGATATATATCATACCT+GGG | + | chr3.4:74125368-74125387 | MS.gene022334:intron | 25.0% |
| ! | CAAAAAAAATTCTATAGTGG+GGG | + | chr3.4:74128343-74128362 | MS.gene022334:intron | 25.0% |
| ! | CAAAACTTCCATTAAATTTG+AGG | - | chr3.4:74128641-74128660 | None:intergenic | 25.0% |
| ! | CTAAATGTTCCATTAAATGA+TGG | + | chr3.4:74126442-74126461 | MS.gene022334:CDS | 25.0% |
| ! | CTTATTACTTTCATGCTAAA+TGG | - | chr3.4:74128758-74128777 | None:intergenic | 25.0% |
| ! | GTGGAAACACATTAATTAAT+AGG | + | chr3.4:74129266-74129285 | MS.gene022334:intron | 25.0% |
| ! | TACATGAGAACAAAAAATCA+AGG | - | chr3.4:74127492-74127511 | None:intergenic | 25.0% |
| ! | TATGTTAATGACATTGTTCT+TGG | + | chr3.4:74125105-74125124 | MS.gene022334:CDS | 25.0% |
| ! | TATTGGATATATATCATACC+TGG | + | chr3.4:74125367-74125386 | MS.gene022334:intron | 25.0% |
| ! | TGACAAAAGGAATGAAATAT+AGG | - | chr3.4:74126126-74126145 | None:intergenic | 25.0% |
| ! | TGCTTCAATTGAAAATTACT+AGG | + | chr3.4:74127836-74127855 | MS.gene022334:intron | 25.0% |
| ! | TTATATGGCAACTTATTACT+TGG | - | chr3.4:74126850-74126869 | None:intergenic | 25.0% |
| !! | AAATTCCTTTGAGTTTCAAT+AGG | - | chr3.4:74125950-74125969 | None:intergenic | 25.0% |
| !! | AATTCCTTTGAGTTTCAATA+GGG | - | chr3.4:74125949-74125968 | None:intergenic | 25.0% |
| !! | ATATGTTTTGTGAGATTGTT+TGG | + | chr3.4:74125683-74125702 | MS.gene022334:intron | 25.0% |
| !! | GCGGGTTAATATTATTTATA+TGG | - | chr3.4:74128596-74128615 | None:intergenic | 25.0% |
| !! | TATGTTTTGTGAGATTGTTT+GGG | + | chr3.4:74125684-74125703 | MS.gene022334:intron | 25.0% |
| !!! | ACCTTGTTTAATTTGGTTTT+TGG | + | chr3.4:74125183-74125202 | MS.gene022334:intron | 25.0% |
| !!! | AGTGTTTTTTTACTCATTCA+TGG | + | chr3.4:74125242-74125261 | MS.gene022334:intron | 25.0% |
| !!! | CTGCTATTCTAACTTTTTTA+TGG | - | chr3.4:74127586-74127605 | None:intergenic | 25.0% |
| !!! | GTTTGATTTTAGTTAGTGAT+TGG | + | chr3.4:74128052-74128071 | MS.gene022334:intron | 25.0% |
| !!! | TATATTTTTTTGCTTTGTGG+GGG | + | chr3.4:74128561-74128580 | MS.gene022334:intron | 25.0% |
| !!! | TTTTAAGAAAAGGAACCAAA+TGG | - | chr3.4:74129417-74129436 | None:intergenic | 25.0% |
| AAACATGTGCAAATGGAAAA+TGG | + | chr3.4:74127052-74127071 | MS.gene022334:intron | 30.0% | |
| AAATGTTGGATATATAGGAG+AGG | + | chr3.4:74125587-74125606 | MS.gene022334:intron | 30.0% | |
| AAGAAAATGACGAAATACAG+AGG | - | chr3.4:74125977-74125996 | None:intergenic | 30.0% | |
| AATTACAATTGTTAGACGAG+AGG | + | chr3.4:74128419-74128438 | MS.gene022334:intron | 30.0% | |
| AATTCCTTTGACTGTCAATA+GGG | - | chr3.4:74125897-74125916 | None:intergenic | 30.0% | |
| ATAATTCGCACTCTCATTAT+CGG | + | chr3.4:74124896-74124915 | MS.gene022334:CDS | 30.0% | |
| ATGCTGATATTGCTATCAAT+TGG | + | chr3.4:74125034-74125053 | MS.gene022334:CDS | 30.0% | |
| ATGTTAAACAAGCGTGTAAT+AGG | - | chr3.4:74129021-74129040 | None:intergenic | 30.0% | |
| ATTATGAATGGCCAAAATGT+TGG | + | chr3.4:74125573-74125592 | MS.gene022334:intron | 30.0% | |
| CAACAAGCCTTAATGAATTA+CGG | - | chr3.4:74128970-74128989 | None:intergenic | 30.0% | |
| CAATAACATAGTGAACAACA+AGG | - | chr3.4:74126252-74126271 | None:intergenic | 30.0% | |
| CTGATTAGTAAAAATGCACT+TGG | + | chr3.4:74128228-74128247 | MS.gene022334:intron | 30.0% | |
| GATTCTCATCTTAACATTTC+TGG | + | chr3.4:74128896-74128915 | MS.gene022334:intron | 30.0% | |
| GCTTATTAGTGGTTATTTAC+TGG | + | chr3.4:74125405-74125424 | MS.gene022334:intron | 30.0% | |
| GGCAAACATATATATTGGAT+TGG | - | chr3.4:74128999-74129018 | None:intergenic | 30.0% | |
| GGTTTGTACTTCTTAAACTA+TGG | + | chr3.4:74128002-74128021 | MS.gene022334:intron | 30.0% | |
| GTAAAAGCTTAGATATTGTG+AGG | - | chr3.4:74128398-74128417 | None:intergenic | 30.0% | |
| GTGACTACATAGTTATACAA+AGG | - | chr3.4:74127298-74127317 | None:intergenic | 30.0% | |
| TAAACTTGAGCTCCTTATAT+TGG | - | chr3.4:74128169-74128188 | None:intergenic | 30.0% | |
| TACCAAATTGACTATTACTC+AGG | - | chr3.4:74127708-74127727 | None:intergenic | 30.0% | |
| TACCTGAGTAATAGTCAATT+TGG | + | chr3.4:74127703-74127722 | MS.gene022334:intron | 30.0% | |
| TAGCATGAAAGTAATAAGTG+AGG | + | chr3.4:74128760-74128779 | MS.gene022334:intron | 30.0% | |
| TCATCCATTCCATCATTTAA+TGG | - | chr3.4:74126454-74126473 | None:intergenic | 30.0% | |
| TCTTAACAATCATTTGCCTT+TGG | - | chr3.4:74128729-74128748 | None:intergenic | 30.0% | |
| TGCTGATATTGCTATCAATT+GGG | + | chr3.4:74125035-74125054 | MS.gene022334:CDS | 30.0% | |
| TGTTAAACAAGCGTGTAATA+GGG | - | chr3.4:74129020-74129039 | None:intergenic | 30.0% | |
| TTGGATATATATCATACCTG+GGG | + | chr3.4:74125369-74125388 | MS.gene022334:intron | 30.0% | |
| TTTACCACCGTAATTCATTA+AGG | + | chr3.4:74128960-74128979 | MS.gene022334:intron | 30.0% | |
| ! | ATCCATGACTTTTTGCATAA+TGG | - | chr3.4:74126503-74126522 | None:intergenic | 30.0% |
| ! | ATTCCTTTGAGTTTCAATAG+GGG | - | chr3.4:74125948-74125967 | None:intergenic | 30.0% |
| ! | CAAGTTTAACTTCTCATATG+AGG | + | chr3.4:74128181-74128200 | MS.gene022334:CDS | 30.0% |
| ! | CTCCTATATATCCAACATTT+TGG | - | chr3.4:74125587-74125606 | None:intergenic | 30.0% |
| ! | TCCATGACTTTTTGCATAAT+GGG | - | chr3.4:74126502-74126521 | None:intergenic | 30.0% |
| ! | TGTTCCATTAAATGATGGAA+TGG | + | chr3.4:74126447-74126466 | MS.gene022334:CDS | 30.0% |
| !! | CTTGTTGTTCACTATGTTAT+TGG | + | chr3.4:74126250-74126269 | MS.gene022334:intron | 30.0% |
| !! | GGAGGTAACATTGATTTAAA+TGG | + | chr3.4:74127867-74127886 | MS.gene022334:intron | 30.0% |
| !! | TCTGTATTTCGTCATTTTCT+TGG | + | chr3.4:74125976-74125995 | MS.gene022334:intron | 30.0% |
| !!! | CTGATTTTTTCCATATCCTT+GGG | - | chr3.4:74126946-74126965 | None:intergenic | 30.0% |
| AAACCCTAGGTATATGAAAC+AGG | - | chr3.4:74125629-74125648 | None:intergenic | 35.0% | |
| AAACCTGAAACAACTCTCAT+TGG | + | chr3.4:74128845-74128864 | MS.gene022334:intron | 35.0% | |
| AAATGTCTCATTAACTAGCC+AGG | - | chr3.4:74127784-74127803 | None:intergenic | 35.0% | |
| AACAGTGGTTGTCATGTTAT+TGG | - | chr3.4:74129220-74129239 | None:intergenic | 35.0% | |
| AAGATGAGAAGGCCAATATA+AGG | + | chr3.4:74128154-74128173 | MS.gene022334:CDS | 35.0% | |
| AATCATCAGAGTGAAAACGA+CGG | - | chr3.4:74124834-74124853 | None:intergenic | 35.0% | |
| AATGTCTCATTAACTAGCCA+GGG | - | chr3.4:74127783-74127802 | None:intergenic | 35.0% | |
| AATGTTCCTCTAATGGTCTT+GGG | + | chr3.4:74126646-74126665 | MS.gene022334:CDS | 35.0% | |
| AATTGTCAAGCTCATGGTAT+TGG | + | chr3.4:74129126-74129145 | MS.gene022334:intron | 35.0% | |
| ACACCAAAATTACTGTCCAA+CGG | - | chr3.4:74128316-74128335 | None:intergenic | 35.0% | |
| ACTGCCTAAATGCAAATCTA+GGG | - | chr3.4:74125280-74125299 | None:intergenic | 35.0% | |
| AGATTGTTTGGGAGAACTTA+TGG | + | chr3.4:74125695-74125714 | MS.gene022334:intron | 35.0% | |
| ATAAGTGTCTGTGCTATAAG+CGG | + | chr3.4:74125840-74125859 | MS.gene022334:intron | 35.0% | |
| ATAGTTATGGATTTGTCCGT+TGG | + | chr3.4:74128297-74128316 | MS.gene022334:intron | 35.0% | |
| ATTCCTTTGACTGTCAATAG+GGG | - | chr3.4:74125896-74125915 | None:intergenic | 35.0% | |
| CAGTTGAAGAGGTTTAATGT+TGG | + | chr3.4:74124919-74124938 | MS.gene022334:CDS | 35.0% | |
| CATATTAAAGACACTGGTGT+GGG | + | chr3.4:74126400-74126419 | MS.gene022334:CDS | 35.0% | |
| CCAAGGATATGGAAAAAATC+AGG | + | chr3.4:74126944-74126963 | MS.gene022334:CDS | 35.0% | |
| GAATTATCCGAAACAATCTC+CGG | - | chr3.4:74124883-74124902 | None:intergenic | 35.0% | |
| GAATTCCTTTGACTGTCAAT+AGG | - | chr3.4:74125898-74125917 | None:intergenic | 35.0% | |
| GAGACTACCCTCAAATTTAA+TGG | + | chr3.4:74128630-74128649 | MS.gene022334:intron | 35.0% | |
| GGCCAAAATGTTGGATATAT+AGG | + | chr3.4:74125582-74125601 | MS.gene022334:intron | 35.0% | |
| GTCTTTCAATGTTCCTCTAA+TGG | + | chr3.4:74126639-74126658 | MS.gene022334:CDS | 35.0% | |
| GTTATACAGTATACATGTGG+CGG | - | chr3.4:74126079-74126098 | None:intergenic | 35.0% | |
| GTTTATGACATTCTTGAACG+TGG | + | chr3.4:74125519-74125538 | MS.gene022334:intron | 35.0% | |
| TAACACAATTGTCAAGCTCA+TGG | + | chr3.4:74129120-74129139 | MS.gene022334:intron | 35.0% | |
| TACTGCCTAAATGCAAATCT+AGG | - | chr3.4:74125281-74125300 | None:intergenic | 35.0% | |
| TAGTAATAATCACCGATGCT+TGG | - | chr3.4:74124691-74124710 | None:intergenic | 35.0% | |
| TAGTTATCACTCCTAGATAG+TGG | - | chr3.4:74127661-74127680 | None:intergenic | 35.0% | |
| TCAAACCAGATGAAAATGGA+AGG | - | chr3.4:74128038-74128057 | None:intergenic | 35.0% | |
| TCCCATTATGCAAAAAGTCA+TGG | + | chr3.4:74126498-74126517 | MS.gene022334:CDS | 35.0% | |
| TGAGCTTCTCAAAGTTCATA+GGG | + | chr3.4:74125134-74125153 | MS.gene022334:CDS | 35.0% | |
| TGCAGATTGATTAACACAGA+TGG | - | chr3.4:74128695-74128714 | None:intergenic | 35.0% | |
| TGCTTCAACTTATCTGTGAA+GGG | + | chr3.4:74126589-74126608 | MS.gene022334:CDS | 35.0% | |
| TGTTTCCACTGACAATCATT+TGG | - | chr3.4:74129255-74129274 | None:intergenic | 35.0% | |
| TTATACAGTATACATGTGGC+GGG | - | chr3.4:74126078-74126097 | None:intergenic | 35.0% | |
| TTGAGCTTCTCAAAGTTCAT+AGG | + | chr3.4:74125133-74125152 | MS.gene022334:CDS | 35.0% | |
| TTGCTTCAACTTATCTGTGA+AGG | + | chr3.4:74126588-74126607 | MS.gene022334:CDS | 35.0% | |
| TTTAGTTAGTGATTGGGTTC+AGG | + | chr3.4:74128059-74128078 | MS.gene022334:intron | 35.0% | |
| ! | AAAACACGCGAGTTTTTCAT+GGG | + | chr3.4:74128467-74128486 | MS.gene022334:intron | 35.0% |
| ! | AAGAAGTACAAACCTCTTCT+GGG | - | chr3.4:74127996-74128015 | None:intergenic | 35.0% |
| ! | ACGGTGTCTTTTCATAAGTT+TGG | + | chr3.4:74126355-74126374 | MS.gene022334:CDS | 35.0% |
| ! | GAAAATTACTAGGACTTGCT+TGG | + | chr3.4:74127846-74127865 | MS.gene022334:intron | 35.0% |
| ! | GGCTGTCTAAAACAAAGAAA+AGG | - | chr3.4:74126809-74126828 | None:intergenic | 35.0% |
| ! | GTAATAGTCAATTTGGTAGC+TGG | + | chr3.4:74127710-74127729 | MS.gene022334:intron | 35.0% |
| ! | TAAGAAGTACAAACCTCTTC+TGG | - | chr3.4:74127997-74128016 | None:intergenic | 35.0% |
| ! | TCATATACCTAGGGTTTGTT+TGG | + | chr3.4:74125632-74125651 | MS.gene022334:intron | 35.0% |
| ! | TGTTTGGATTGACTTATCTG+AGG | + | chr3.4:74125648-74125667 | MS.gene022334:intron | 35.0% |
| ! | TTTAGGTTCTCCATGTTGTT+TGG | - | chr3.4:74126919-74126938 | None:intergenic | 35.0% |
| !! | AGCATCGGTGATTATTACTA+CGG | + | chr3.4:74124691-74124710 | MS.gene022334:CDS | 35.0% |
| !! | TGTTTGGATTGGCTTATTAG+TGG | + | chr3.4:74125394-74125413 | MS.gene022334:intron | 35.0% |
| !!! | CCTGATTTTTTCCATATCCT+TGG | - | chr3.4:74126947-74126966 | None:intergenic | 35.0% |
| ACTGCGAAAACATGTGCAAA+TGG | + | chr3.4:74127045-74127064 | MS.gene022334:intron | 40.0% | |
| ACTGGGCATATTAAAGACAC+TGG | + | chr3.4:74126394-74126413 | MS.gene022334:CDS | 40.0% | |
| AGAATCTTACACCCCCTTTA+AGG | - | chr3.4:74128882-74128901 | None:intergenic | 40.0% | |
| AGGCCTGTTTCATATACCTA+GGG | + | chr3.4:74125623-74125642 | MS.gene022334:intron | 40.0% | |
| AGGTATATGAAACAGGCCTA+AGG | - | chr3.4:74125622-74125641 | None:intergenic | 40.0% | |
| AGTCAATCCAAACAAACCCT+AGG | - | chr3.4:74125642-74125661 | None:intergenic | 40.0% | |
| CAAAGCCAAATGATTGTCAG+TGG | + | chr3.4:74129247-74129266 | MS.gene022334:intron | 40.0% | |
| CAAGCCTTAATGAATTACGG+TGG | - | chr3.4:74128967-74128986 | None:intergenic | 40.0% | |
| CAATGTTCCTCTAATGGTCT+TGG | + | chr3.4:74126645-74126664 | MS.gene022334:CDS | 40.0% | |
| CATTGAAGAACAACTGCATC+AGG | - | chr3.4:74126535-74126554 | None:intergenic | 40.0% | |
| CCGACTTCAAAAATGTCTCA+GGG | - | chr3.4:74127628-74127647 | None:intergenic | 40.0% | |
| CGACATGAAGTGTATAGTCT+GGG | - | chr3.4:74126894-74126913 | None:intergenic | 40.0% | |
| CGACTTCAAAAATGTCTCAG+GGG | - | chr3.4:74127627-74127646 | None:intergenic | 40.0% | |
| CTGCACAAGTAGAGAAAGAA+AGG | - | chr3.4:74126724-74126743 | None:intergenic | 40.0% | |
| CTGCAGCTTTCTTTATCCAA+AGG | + | chr3.4:74128710-74128729 | MS.gene022334:intron | 40.0% | |
| CTTTAATATGCCCAGTTCCA+GGG | - | chr3.4:74126390-74126409 | None:intergenic | 40.0% | |
| CTTTCCTAACTCCTTAAAGG+GGG | + | chr3.4:74128868-74128887 | MS.gene022334:intron | 40.0% | |
| CTTTCTTTCTCTACTTGTGC+AGG | + | chr3.4:74126722-74126741 | MS.gene022334:intron | 40.0% | |
| GAAGAGGTTTAATGTTGGTG+AGG | + | chr3.4:74124924-74124943 | MS.gene022334:CDS | 40.0% | |
| GAGGAACATTGAAAGACCTA+AGG | - | chr3.4:74126636-74126655 | None:intergenic | 40.0% | |
| GATATTGCTATCAATTGGGC+TGG | + | chr3.4:74125039-74125058 | MS.gene022334:CDS | 40.0% | |
| GATGCAGTTGTTCTTCAATG+TGG | + | chr3.4:74126535-74126554 | MS.gene022334:CDS | 40.0% | |
| GCATATTAAAGACACTGGTG+TGG | + | chr3.4:74126399-74126418 | MS.gene022334:CDS | 40.0% | |
| GCTTACAAAAGCCTCATTAC+TGG | + | chr3.4:74129148-74129167 | MS.gene022334:intron | 40.0% | |
| GCTTTCCTAACTCCTTAAAG+GGG | + | chr3.4:74128867-74128886 | MS.gene022334:intron | 40.0% | |
| GGCTTTCCTAACTCCTTAAA+GGG | + | chr3.4:74128866-74128885 | MS.gene022334:intron | 40.0% | |
| GGTGATTATTACTACGGTCA+AGG | + | chr3.4:74124697-74124716 | MS.gene022334:CDS | 40.0% | |
| GTTGATATTGATGTCCACCA+CGG | + | chr3.4:74126289-74126308 | MS.gene022334:CDS | 40.0% | |
| TAAGACCAAAACGTCAGTTG+TGG | + | chr3.4:74128100-74128119 | MS.gene022334:CDS | 40.0% | |
| TACTTCTACGAACCAAGCAT+CGG | + | chr3.4:74124676-74124695 | MS.gene022334:CDS | 40.0% | |
| TAGGCCTGTTTCATATACCT+AGG | + | chr3.4:74125622-74125641 | MS.gene022334:intron | 40.0% | |
| TCATGTCGAACCAAACAACA+TGG | + | chr3.4:74126906-74126925 | MS.gene022334:CDS | 40.0% | |
| TCGACATGAAGTGTATAGTC+TGG | - | chr3.4:74126895-74126914 | None:intergenic | 40.0% | |
| TCTTTAATATGCCCAGTTCC+AGG | - | chr3.4:74126391-74126410 | None:intergenic | 40.0% | |
| TGAAAACGACGGATATCTTC+CGG | - | chr3.4:74124823-74124842 | None:intergenic | 40.0% | |
| TGAAAGACCTAAGGAAACGA+AGG | - | chr3.4:74126627-74126646 | None:intergenic | 40.0% | |
| TGAGGGTTAATCCAGTAATG+AGG | - | chr3.4:74129162-74129181 | None:intergenic | 40.0% | |
| TGGCTTTCCTAACTCCTTAA+AGG | + | chr3.4:74128865-74128884 | MS.gene022334:intron | 40.0% | |
| TGTCCCCTATTGAAACTCAA+AGG | + | chr3.4:74125942-74125961 | MS.gene022334:intron | 40.0% | |
| TGTGCCCTAGATTTGCATTT+AGG | + | chr3.4:74125273-74125292 | MS.gene022334:intron | 40.0% | |
| TTGGATTCGATCAAGATCAC+TGG | + | chr3.4:74125995-74126014 | MS.gene022334:intron | 40.0% | |
| TTGGCCATTCATAATCGATG+CGG | - | chr3.4:74125568-74125587 | None:intergenic | 40.0% | |
| ! | AAACACGCGAGTTTTTCATG+GGG | + | chr3.4:74128468-74128487 | MS.gene022334:intron | 40.0% |
| ! | AAGCCAATGAGAGTTGTTTC+AGG | - | chr3.4:74128851-74128870 | None:intergenic | 40.0% |
| ! | AAGTTTGGTGATTTCTTCCC+TGG | + | chr3.4:74126370-74126389 | MS.gene022334:CDS | 40.0% |
| ! | AATTACGGTGGTAAAGTGCT+AGG | - | chr3.4:74128955-74128974 | None:intergenic | 40.0% |
| ! | AATTACTAGGACTTGCTTGG+AGG | + | chr3.4:74127849-74127868 | MS.gene022334:intron | 40.0% |
| ! | ACTGTCCTTCCATTTTCATC+TGG | + | chr3.4:74128030-74128049 | MS.gene022334:intron | 40.0% |
| ! | CACTGACAATCATTTGGCTT+TGG | - | chr3.4:74129249-74129268 | None:intergenic | 40.0% |
| ! | GAAAACACGCGAGTTTTTCA+TGG | + | chr3.4:74128466-74128485 | MS.gene022334:intron | 40.0% |
| ! | TATCATACCTGGGGTTTGTT+TGG | + | chr3.4:74125378-74125397 | MS.gene022334:intron | 40.0% |
| ! | TGCCATGTCTGTGTGTTTTA+GGG | + | chr3.4:74127234-74127253 | MS.gene022334:intron | 40.0% |
| ! | TGTCCGTTGGACAGTAATTT+TGG | + | chr3.4:74128310-74128329 | MS.gene022334:intron | 40.0% |
| ! | TTGTTCAAGCAAAGTGTTCC+TGG | - | chr3.4:74127911-74127930 | None:intergenic | 40.0% |
| !! | ATGGTAACTTTTTCTCGCAG+AGG | - | chr3.4:74127189-74127208 | None:intergenic | 40.0% |
| !! | ATTGGCCTTCTCATCTTCAT+CGG | - | chr3.4:74128151-74128170 | None:intergenic | 40.0% |
| !! | GACGGTTAATTTGCATACGA+CGG | - | chr3.4:74124786-74124805 | None:intergenic | 40.0% |
| !! | GTTGATGGTGTTGTCTGAAA+AGG | - | chr3.4:74127964-74127983 | None:intergenic | 40.0% |
| !! | GTTGGACAGTAATTTTGGTG+TGG | + | chr3.4:74128315-74128334 | MS.gene022334:intron | 40.0% |
| !! | TAGTCCGCATCGATTATGAA+TGG | + | chr3.4:74125561-74125580 | MS.gene022334:intron | 40.0% |
| !! | TGGCTTTGGATAAAGAACAG+TGG | - | chr3.4:74129235-74129254 | None:intergenic | 40.0% |
| !!! | CCCTGAGACATTTTTGAAGT+CGG | + | chr3.4:74127625-74127644 | MS.gene022334:intron | 40.0% |
| ACACAGATGGCTAAGCATAG+AGG | - | chr3.4:74128682-74128701 | None:intergenic | 45.0% | |
| ACGGTGGTTAAATACCAACC+AGG | - | chr3.4:74127022-74127041 | None:intergenic | 45.0% | |
| CACTACTGATCGAGTGATGA+CGG | + | chr3.4:74126336-74126355 | MS.gene022334:CDS | 45.0% | |
| CACTAGTGTGATATAGCAGC+TGG | + | chr3.4:74127315-74127334 | MS.gene022334:intron | 45.0% | |
| CAGCGGTAGATGCATAGTTA+TGG | + | chr3.4:74128284-74128303 | MS.gene022334:intron | 45.0% | |
| CCATATCCTTGGGTGTGTTT+AGG | - | chr3.4:74126936-74126955 | None:intergenic | 45.0% | |
| CCTAAACACACCCAAGGATA+TGG | + | chr3.4:74126933-74126952 | MS.gene022334:CDS | 45.0% | |
| CGGTGGTTAAATACCAACCA+GGG | - | chr3.4:74127021-74127040 | None:intergenic | 45.0% | |
| CTCATTATCGGCAGTTGAAG+AGG | + | chr3.4:74124908-74124927 | MS.gene022334:CDS | 45.0% | |
| GAGCATTTAGCAGCTGCAAA+CGG | - | chr3.4:74127403-74127422 | None:intergenic | 45.0% | |
| GATAAGCCAGAAGTTAAGCC+TGG | + | chr3.4:74129490-74129509 | MS.gene022334:CDS | 45.0% | |
| GATTAACCCTCAAGCAAGCA+GGG | + | chr3.4:74129170-74129189 | MS.gene022334:intron | 45.0% | |
| GCAGAAGACATAACATGCGA+TGG | - | chr3.4:74127208-74127227 | None:intergenic | 45.0% | |
| GCTAAGAAAGCTGAAGCTTC+TGG | + | chr3.4:74125075-74125094 | MS.gene022334:CDS | 45.0% | |
| GGATACGATGGGGTTTCATT+GGG | - | chr3.4:74124726-74124745 | None:intergenic | 45.0% | |
| GTCTCCAGTCTACATAGTAG+CGG | - | chr3.4:74128615-74128634 | None:intergenic | 45.0% | |
| GTGATTTCTTCCCTGGAACT+GGG | + | chr3.4:74126377-74126396 | MS.gene022334:CDS | 45.0% | |
| GTGTAGAAGTAGGTTAGCAG+CGG | + | chr3.4:74128267-74128286 | MS.gene022334:intron | 45.0% | |
| GTTAAATACCAACCAGGGCA+CGG | - | chr3.4:74127016-74127035 | None:intergenic | 45.0% | |
| TAACCCGCTACTATGTAGAC+TGG | + | chr3.4:74128608-74128627 | MS.gene022334:intron | 45.0% | |
| TAATGGGACGAAACAGAGCA+CGG | - | chr3.4:74126486-74126505 | None:intergenic | 45.0% | |
| TAGTGTGATATAGCAGCTGG+TGG | + | chr3.4:74127318-74127337 | MS.gene022334:intron | 45.0% | |
| TATCAACATACAGCACACGC+TGG | - | chr3.4:74126276-74126295 | None:intergenic | 45.0% | |
| TCTCATTAACTAGCCAGGGA+GGG | - | chr3.4:74127779-74127798 | None:intergenic | 45.0% | |
| TCTCCAGTCTACATAGTAGC+GGG | - | chr3.4:74128614-74128633 | None:intergenic | 45.0% | |
| TGATCCCGATGAAGATGAGA+AGG | + | chr3.4:74128143-74128162 | MS.gene022334:CDS | 45.0% | |
| TGATGAGATTGTGTGCCATG+CGG | - | chr3.4:74124747-74124766 | None:intergenic | 45.0% | |
| TGATTGGGTTCAGGAAGATG+AGG | + | chr3.4:74128068-74128087 | MS.gene022334:intron | 45.0% | |
| TGTCCCCTATTGACAGTCAA+AGG | + | chr3.4:74125890-74125909 | MS.gene022334:intron | 45.0% | |
| TTAGAGCATAGTCCTTCCCA+GGG | - | chr3.4:74126426-74126445 | None:intergenic | 45.0% | |
| ! | AGGATTGTCCTGTTTTCGAC+GGG | + | chr3.4:74124944-74124963 | MS.gene022334:CDS | 45.0% |
| ! | ATTGCTATCAATTGGGCTGG+TGG | + | chr3.4:74125042-74125061 | MS.gene022334:CDS | 45.0% |
| ! | GAGGATTGTCCTGTTTTCGA+CGG | + | chr3.4:74124943-74124962 | MS.gene022334:CDS | 45.0% |
| ! | GATGCTTGGTTCGTAGAAGT+AGG | - | chr3.4:74124677-74124696 | None:intergenic | 45.0% |
| ! | GCCGACTTCAAAAATGTCTC+AGG | - | chr3.4:74127629-74127648 | None:intergenic | 45.0% |
| ! | GTGCCATGTCTGTGTGTTTT+AGG | + | chr3.4:74127233-74127252 | MS.gene022334:intron | 45.0% |
| ! | TACACCCCCTTTAAGGAGTT+AGG | - | chr3.4:74128875-74128894 | None:intergenic | 45.0% |
| ! | TACCTGGGGTTTGTTTGGAT+TGG | + | chr3.4:74125383-74125402 | MS.gene022334:intron | 45.0% |
| ! | TGGTTGGTATTTAACCACCG+TGG | + | chr3.4:74127021-74127040 | MS.gene022334:intron | 45.0% |
| ! | TGTTGTCTGAAAAGGAGCAC+TGG | - | chr3.4:74127956-74127975 | None:intergenic | 45.0% |
| ! | TTCCTCTAATGGTCTTGGGT+GGG | + | chr3.4:74126650-74126669 | MS.gene022334:CDS | 45.0% |
| ! | TTGGCCTTCTCATCTTCATC+GGG | - | chr3.4:74128150-74128169 | None:intergenic | 45.0% |
| ! | TTTAGAGCATAGTCCTTCCC+AGG | - | chr3.4:74126427-74126446 | None:intergenic | 45.0% |
| ! | TTTTAGACAGCCGTAGCAGT+AGG | + | chr3.4:74126817-74126836 | MS.gene022334:intron | 45.0% |
| !! | CCATGTCTGTGTGTTTTAGG+GGG | + | chr3.4:74127236-74127255 | MS.gene022334:intron | 45.0% |
| !! | GATCTATTGGTGCTGCTGTT+AGG | + | chr3.4:74124998-74125017 | MS.gene022334:CDS | 45.0% |
| !! | GCCATGTCTGTGTGTTTTAG+GGG | + | chr3.4:74127235-74127254 | MS.gene022334:intron | 45.0% |
| !! | GGACAGTAATTTTGGTGTGG+TGG | + | chr3.4:74128318-74128337 | MS.gene022334:intron | 45.0% |
| !! | GGTTAATTTGCATACGACGG+TGG | - | chr3.4:74124783-74124802 | None:intergenic | 45.0% |
| !! | GTAACTTTTTCTCGCAGAGG+TGG | - | chr3.4:74127186-74127205 | None:intergenic | 45.0% |
| !! | GTTGTCTGAAAAGGAGCACT+GGG | - | chr3.4:74127955-74127974 | None:intergenic | 45.0% |
| !! | TGGAGCTTGTTAGGGACAAA+AGG | - | chr3.4:74127166-74127185 | None:intergenic | 45.0% |
| !! | TTGCTATCAATTGGGCTGGT+GGG | + | chr3.4:74125043-74125062 | MS.gene022334:CDS | 45.0% |
| !!! | TTCTTTTTTTGGGGCTGCCA+TGG | + | chr3.4:74127138-74127157 | MS.gene022334:intron | 45.0% |
| AACTGCAGAAGTCCCAGAAG+AGG | + | chr3.4:74127981-74128000 | MS.gene022334:CDS | 50.0% | |
| AATTGATCGTTACCGTGCCC+TGG | + | chr3.4:74127001-74127020 | MS.gene022334:intron | 50.0% | |
| AGACGTAGCTCCTGCAATAG+TGG | + | chr3.4:74127365-74127384 | MS.gene022334:intron | 50.0% | |
| AGCCAATCCAAACAAACCCC+AGG | - | chr3.4:74125388-74125407 | None:intergenic | 50.0% | |
| ATTGATGTCCACCACGGAGA+TGG | + | chr3.4:74126295-74126314 | MS.gene022334:CDS | 50.0% | |
| CAGACTGCCTTCGTTTCCTT+AGG | + | chr3.4:74126617-74126636 | MS.gene022334:CDS | 50.0% | |
| CCAAAACGTCAGTTGTGGAG+TGG | + | chr3.4:74128105-74128124 | MS.gene022334:CDS | 50.0% | |
| CCCCCTAAAACACACAGACA+TGG | - | chr3.4:74127239-74127258 | None:intergenic | 50.0% | |
| CGAAACAATCTCCGGCGAAA+CGG | - | chr3.4:74124875-74124894 | None:intergenic | 50.0% | |
| CGGATACGATGGGGTTTCAT+TGG | - | chr3.4:74124727-74124746 | None:intergenic | 50.0% | |
| CGTTTCGCCGGAGATTGTTT+CGG | + | chr3.4:74124873-74124892 | MS.gene022334:CDS | 50.0% | |
| CTACAGCATACTTCCGATGG+TGG | - | chr3.4:74127344-74127363 | None:intergenic | 50.0% | |
| CTGCTACAGCATACTTCCGA+TGG | - | chr3.4:74127347-74127366 | None:intergenic | 50.0% | |
| GAAATGGGTGTAGCTGAGAG+CGG | + | chr3.4:74124601-74124620 | MS.gene022334:CDS | 50.0% | |
| GGAAAAAGCCCGTCGAAAAC+AGG | - | chr3.4:74124955-74124974 | None:intergenic | 50.0% | |
| GGAGAACCTAAACACACCCA+AGG | + | chr3.4:74126927-74126946 | MS.gene022334:CDS | 50.0% | |
| GGAGAGGTGACTCATACCTT+AGG | + | chr3.4:74125603-74125622 | MS.gene022334:intron | 50.0% | |
| GGATTAACCCTCAAGCAAGC+AGG | + | chr3.4:74129169-74129188 | MS.gene022334:intron | 50.0% | |
| GGCGCATCACTTCCTTCAAT+CGG | + | chr3.4:74124625-74124644 | MS.gene022334:CDS | 50.0% | |
| GGTGATTTCTTCCCTGGAAC+TGG | + | chr3.4:74126376-74126395 | MS.gene022334:CDS | 50.0% | |
| GGTTCAGGAAGATGAGGACA+TGG | + | chr3.4:74128074-74128093 | MS.gene022334:intron | 50.0% | |
| GTCTCATTAACTAGCCAGGG+AGG | - | chr3.4:74127780-74127799 | None:intergenic | 50.0% | |
| GTTTCTCTCTACCGTTTCGC+CGG | + | chr3.4:74124861-74124880 | MS.gene022334:CDS | 50.0% | |
| TACGGAATGTTGCTCGCTGT+TGG | + | chr3.4:74126686-74126705 | MS.gene022334:CDS | 50.0% | |
| TGCACACCAGGCTTAACTTC+TGG | - | chr3.4:74129499-74129518 | None:intergenic | 50.0% | |
| TTGCAGCTGCTAAATGCTCC+AGG | + | chr3.4:74127404-74127423 | MS.gene022334:intron | 50.0% | |
| ! | ACGGTGGTAAAGTGCTAGGA+GGG | - | chr3.4:74128951-74128970 | None:intergenic | 50.0% |
| ! | CACATGTTTTCGCAGTGCCA+CGG | - | chr3.4:74127041-74127060 | None:intergenic | 50.0% |
| ! | CCACTCCACAACTGACGTTT+TGG | - | chr3.4:74128108-74128127 | None:intergenic | 50.0% |
| ! | GCTGCTTTGTGCCACTATCT+AGG | + | chr3.4:74127647-74127666 | MS.gene022334:intron | 50.0% |
| ! | GCTTCTGCTGGTGGATCTAT+TGG | + | chr3.4:74124985-74125004 | MS.gene022334:CDS | 50.0% |
| ! | GTTCCTCTAATGGTCTTGGG+TGG | + | chr3.4:74126649-74126668 | MS.gene022334:CDS | 50.0% |
| ! | TACGGTGGTAAAGTGCTAGG+AGG | - | chr3.4:74128952-74128971 | None:intergenic | 50.0% |
| ! | TCCTCTAATGGTCTTGGGTG+GGG | + | chr3.4:74126651-74126670 | MS.gene022334:CDS | 50.0% |
| ! | TCTGGGACTTCTGCAGTTGA+TGG | - | chr3.4:74127979-74127998 | None:intergenic | 50.0% |
| ! | TGTGGAGCTGATTCTCTGTC+CGG | + | chr3.4:74126553-74126572 | MS.gene022334:CDS | 50.0% |
| !! | GGGTTGGCTATACTGCATAG+TGG | + | chr3.4:74127256-74127275 | MS.gene022334:intron | 50.0% |
| !! | GTTAGGGACAAAAGGTGCCA+TGG | - | chr3.4:74127158-74127177 | None:intergenic | 50.0% |
| !!! | GTCTGTGTGTTTTAGGGGGT+TGG | + | chr3.4:74127240-74127259 | MS.gene022334:intron | 50.0% |
| AGCTACAAATCCTCCCTCCC+TGG | + | chr3.4:74127763-74127782 | MS.gene022334:intron | 55.0% | |
| CATTAACTAGCCAGGGAGGG+AGG | - | chr3.4:74127776-74127795 | None:intergenic | 55.0% | |
| CTGATTCTCTGTCCGGTGAC+AGG | + | chr3.4:74126560-74126579 | MS.gene022334:CDS | 55.0% | |
| GAAACCCCATCGTATCCGCA+TGG | + | chr3.4:74124729-74124748 | MS.gene022334:CDS | 55.0% | |
| GAAGCAACCCAACCTGTCAC+CGG | - | chr3.4:74126575-74126594 | None:intergenic | 55.0% | |
| GCGATCATGGCCACTATTGC+AGG | - | chr3.4:74127378-74127397 | None:intergenic | 55.0% | |
| GCTGCTGTTAGGCTCAATCG+TGG | + | chr3.4:74125009-74125028 | MS.gene022334:CDS | 55.0% | |
| GTGGGGGAGGATACACTGTA+CGG | + | chr3.4:74126668-74126687 | MS.gene022334:CDS | 55.0% | |
| GTGTGCCATGCGGATACGAT+GGG | - | chr3.4:74124737-74124756 | None:intergenic | 55.0% | |
| TACGACGGTGGAGAGAGTAG+TGG | - | chr3.4:74124771-74124790 | None:intergenic | 55.0% | |
| TACGCGACGCTTCATTGCGT+CGG | - | chr3.4:74124653-74124672 | None:intergenic | 55.0% | |
| TAGATCCACCAGCAGAAGCC+TGG | - | chr3.4:74124984-74125003 | None:intergenic | 55.0% | |
| TCTCTGTCCGGTGACAGGTT+GGG | + | chr3.4:74126565-74126584 | MS.gene022334:CDS | 55.0% | |
| TGGCTCCACTCCTACTGCTA+CGG | - | chr3.4:74126830-74126849 | None:intergenic | 55.0% | |
| TGTGCCATGCGGATACGATG+GGG | - | chr3.4:74124736-74124755 | None:intergenic | 55.0% | |
| TGTGTGCCATGCGGATACGA+TGG | - | chr3.4:74124738-74124757 | None:intergenic | 55.0% | |
| TTCTCTGTCCGGTGACAGGT+TGG | + | chr3.4:74126564-74126583 | MS.gene022334:CDS | 55.0% | |
| ! | ACTGGGAGCATGAGGAAGTC+TGG | - | chr3.4:74127938-74127957 | None:intergenic | 55.0% |
| ! | ATGTTTTCGCAGTGCCACGG+TGG | - | chr3.4:74127038-74127057 | None:intergenic | 55.0% |
| ! | CCTCTAATGGTCTTGGGTGG+GGG | + | chr3.4:74126652-74126671 | MS.gene022334:CDS | 55.0% |
| ! | GTCTCAGGGGAAGCGCATAA+CGG | - | chr3.4:74127614-74127633 | None:intergenic | 55.0% |
| ! | TCGCAGAGGTGGAGCTTGTT+AGG | - | chr3.4:74127175-74127194 | None:intergenic | 55.0% |
| ! | TCTCAGGGGAAGCGCATAAC+GGG | - | chr3.4:74127613-74127632 | None:intergenic | 55.0% |
| !! | AAAGGAGCACTGGGAGCATG+AGG | - | chr3.4:74127946-74127965 | None:intergenic | 55.0% |
| !! | CGCAGAGGTGGAGCTTGTTA+GGG | - | chr3.4:74127174-74127193 | None:intergenic | 55.0% |
| !! | TGCTCGCTGTTGGTGTTACG+AGG | + | chr3.4:74126696-74126715 | MS.gene022334:CDS | 55.0% |
| AAAGACACTGGTGTGGGCCC+TGG | + | chr3.4:74126406-74126425 | MS.gene022334:CDS | 60.0% | |
| AAGACACTGGTGTGGGCCCT+GGG | + | chr3.4:74126407-74126426 | MS.gene022334:CDS | 60.0% | |
| ACGGATATCTTCCGGCGCAG+CGG | - | chr3.4:74124815-74124834 | None:intergenic | 60.0% | |
| ATGGGTGTAGCTGAGAGCGG+TGG | + | chr3.4:74124604-74124623 | MS.gene022334:CDS | 60.0% | |
| CAGGCGCGCAGCAGATATGA+TGG | + | chr3.4:74129462-74129481 | MS.gene022334:intron | 60.0% | |
| CCAATCACCGTGGGGACTTG+GGG | + | chr3.4:74127736-74127755 | MS.gene022334:intron | 60.0% | |
| CCAGCAGAAGCCTGGCAGAA+CGG | - | chr3.4:74124976-74124995 | None:intergenic | 60.0% | |
| CCCAAGTCCCCACGGTGATT+GGG | - | chr3.4:74127738-74127757 | None:intergenic | 60.0% | |
| CCCAATCACCGTGGGGACTT+GGG | + | chr3.4:74127735-74127754 | MS.gene022334:intron | 60.0% | |
| CCCCCACCCAAGACCATTAG+AGG | - | chr3.4:74126655-74126674 | None:intergenic | 60.0% | |
| GACAGCCGTAGCAGTAGGAG+TGG | + | chr3.4:74126822-74126841 | MS.gene022334:intron | 60.0% | |
| GAGCTGCCCTGCTTGCTTGA+GGG | - | chr3.4:74129179-74129198 | None:intergenic | 60.0% | |
| GATCGTTACCGTGCCCTGGT+TGG | + | chr3.4:74127005-74127024 | MS.gene022334:intron | 60.0% | |
| GCTGCAAACGGCTGCGATCA+TGG | - | chr3.4:74127391-74127410 | None:intergenic | 60.0% | |
| TAGCAGCTGGTGGCCACCAT+CGG | + | chr3.4:74127328-74127347 | MS.gene022334:intron | 60.0% | |
| TCCCAATCACCGTGGGGACT+TGG | + | chr3.4:74127734-74127753 | MS.gene022334:intron | 60.0% | |
| TGAGCTGCCCTGCTTGCTTG+AGG | - | chr3.4:74129180-74129199 | None:intergenic | 60.0% | |
| TTCTGCCAGGCTTCTGCTGG+TGG | + | chr3.4:74124976-74124995 | MS.gene022334:CDS | 60.0% | |
| ! | AGCTGGCTCCCAATCACCGT+GGG | + | chr3.4:74127727-74127746 | MS.gene022334:intron | 60.0% |
| ! | CTAATGGTCTTGGGTGGGGG+AGG | + | chr3.4:74126655-74126674 | MS.gene022334:CDS | 60.0% |
| ! | TAGCTGGCTCCCAATCACCG+TGG | + | chr3.4:74127726-74127745 | MS.gene022334:intron | 60.0% |
| !! | ATTGCGTCGGCGCCGATTGA+AGG | - | chr3.4:74124640-74124659 | None:intergenic | 60.0% |
| !! | CGGGCTTTTTCCGTTCTGCC+AGG | + | chr3.4:74124963-74124982 | MS.gene022334:CDS | 60.0% |
| !! | TAGCATGGCGGATGCACACC+AGG | - | chr3.4:74129511-74129530 | None:intergenic | 60.0% |
| CCACCACGGAGATGGCGTTG+AGG | + | chr3.4:74126303-74126322 | MS.gene022334:CDS | 65.0% | |
| CCCCAAGTCCCCACGGTGAT+TGG | - | chr3.4:74127739-74127758 | None:intergenic | 65.0% | |
| CCGTTCTGCCAGGCTTCTGC+TGG | + | chr3.4:74124973-74124992 | MS.gene022334:CDS | 65.0% | |
| CCTCAACGCCATCTCCGTGG+TGG | - | chr3.4:74126306-74126325 | None:intergenic | 65.0% | |
| CCTCCTCAACGCCATCTCCG+TGG | - | chr3.4:74126309-74126328 | None:intergenic | 65.0% | |
| GCTTGCTCCCCAAGTCCCCA+CGG | - | chr3.4:74127746-74127765 | None:intergenic | 65.0% | |
| ! | CCACGGAGATGGCGTTGAGG+AGG | + | chr3.4:74126306-74126325 | MS.gene022334:CDS | 65.0% |
| ! | GCTGGCTCCCAATCACCGTG+GGG | + | chr3.4:74127728-74127747 | MS.gene022334:intron | 65.0% |
| CACTGGTGTGGGCCCTGGGA+AGG | + | chr3.4:74126411-74126430 | MS.gene022334:CDS | 70.0% | |
| TCTTCCGGCGCAGCGGCGAA+AGG | - | chr3.4:74124808-74124827 | None:intergenic | 70.0% | |
| CCGGCGCAGCGGCGAAAGGA+CGG | - | chr3.4:74124804-74124823 | None:intergenic | 75.0% | |
| CCGTCCTTTCGCCGCTGCGC+CGG | + | chr3.4:74124801-74124820 | MS.gene022334:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 74124589 | 74129531 | 74124589 | ID=MS.gene022334 |
| chr3.4 | mRNA | 74124589 | 74129531 | 74124589 | ID=MS.gene022334.t1;Parent=MS.gene022334 |
| chr3.4 | exon | 74124589 | 74125155 | 74124589 | ID=MS.gene022334.t1.exon1;Parent=MS.gene022334.t1 |
| chr3.4 | CDS | 74124589 | 74125155 | 74124589 | ID=cds.MS.gene022334.t1;Parent=MS.gene022334.t1 |
| chr3.4 | exon | 74126277 | 74126717 | 74126277 | ID=MS.gene022334.t1.exon2;Parent=MS.gene022334.t1 |
| chr3.4 | CDS | 74126277 | 74126717 | 74126277 | ID=cds.MS.gene022334.t1;Parent=MS.gene022334.t1 |
| chr3.4 | exon | 74126823 | 74126965 | 74126823 | ID=MS.gene022334.t1.exon3;Parent=MS.gene022334.t1 |
| chr3.4 | CDS | 74126823 | 74126965 | 74126823 | ID=cds.MS.gene022334.t1;Parent=MS.gene022334.t1 |
| chr3.4 | exon | 74127912 | 74128002 | 74127912 | ID=MS.gene022334.t1.exon4;Parent=MS.gene022334.t1 |
| chr3.4 | CDS | 74127912 | 74128002 | 74127912 | ID=cds.MS.gene022334.t1;Parent=MS.gene022334.t1 |
| chr3.4 | exon | 74128081 | 74128202 | 74128081 | ID=MS.gene022334.t1.exon5;Parent=MS.gene022334.t1 |
| chr3.4 | CDS | 74128081 | 74128202 | 74128081 | ID=cds.MS.gene022334.t1;Parent=MS.gene022334.t1 |
| chr3.4 | exon | 74129465 | 74129531 | 74129465 | ID=MS.gene022334.t1.exon6;Parent=MS.gene022334.t1 |
| chr3.4 | CDS | 74129465 | 74129531 | 74129465 | ID=cds.MS.gene022334.t1;Parent=MS.gene022334.t1 |
| Gene Sequence |
| Protein sequence |
