Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053171.t1 | KEH28582.1 | 90.2 | 234 | 22 | 1 | 11 | 243 | 74 | 307 | 1.90E-108 | 402.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053171.t1 | Q94AN4 | 60.6 | 241 | 78 | 4 | 11 | 243 | 96 | 327 | 5.3e-67 | 255.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053171.t1 | A0A072UFX2 | 90.2 | 234 | 22 | 1 | 11 | 243 | 74 | 307 | 1.4e-108 | 402.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene053171.t1 | TF | AP2/ERF-ERF |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051021 | MS.gene053171 | 0.815859 | 7.45E-52 | -1.69E-46 |
| MS.gene051720 | MS.gene053171 | 0.811812 | 5.80E-51 | -1.69E-46 |
| MS.gene051885 | MS.gene053171 | 0.804174 | 2.45E-49 | -1.69E-46 |
| MS.gene052016 | MS.gene053171 | 0.806008 | 1.01E-49 | -1.69E-46 |
| MS.gene052104 | MS.gene053171 | 0.807224 | 5.61E-50 | -1.69E-46 |
| MS.gene052335 | MS.gene053171 | 0.807012 | 6.22E-50 | -1.69E-46 |
| MS.gene052732 | MS.gene053171 | 0.830605 | 2.67E-55 | -1.69E-46 |
| MS.gene053143 | MS.gene053171 | 0.849175 | 3.83E-60 | -1.69E-46 |
| MS.gene053144 | MS.gene053171 | 0.853101 | 2.99E-61 | -1.69E-46 |
| MS.gene053171 | MS.gene053581 | 0.84745 | 1.15E-59 | -1.69E-46 |
| MS.gene053171 | MS.gene054554 | 0.927649 | 8.76E-92 | -1.69E-46 |
| MS.gene053171 | MS.gene054584 | 0.857152 | 1.98E-62 | -1.69E-46 |
| MS.gene053171 | MS.gene054824 | 0.814977 | 1.17E-51 | -1.69E-46 |
| MS.gene053171 | MS.gene055465 | 0.811856 | 5.68E-51 | -1.69E-46 |
| MS.gene053171 | MS.gene055468 | 0.81206 | 5.13E-51 | -1.69E-46 |
| MS.gene053171 | MS.gene055469 | 0.817936 | 2.55E-52 | -1.69E-46 |
| MS.gene053171 | MS.gene055537 | 0.836091 | 1.15E-56 | -1.69E-46 |
| MS.gene053171 | MS.gene055580 | -0.803918 | 2.77E-49 | -1.69E-46 |
| MS.gene053171 | MS.gene056797 | 0.809506 | 1.83E-50 | -1.69E-46 |
| MS.gene053171 | MS.gene058492 | 0.823906 | 1.08E-53 | -1.69E-46 |
| MS.gene053171 | MS.gene058649 | 0.8196 | 1.07E-52 | -1.69E-46 |
| MS.gene053171 | MS.gene05870 | 0.818207 | 2.21E-52 | -1.69E-46 |
| MS.gene053171 | MS.gene061006 | 0.807129 | 5.88E-50 | -1.69E-46 |
| MS.gene053171 | MS.gene061100 | 0.821562 | 3.78E-53 | -1.69E-46 |
| MS.gene053171 | MS.gene061707 | 0.825958 | 3.53E-54 | -1.69E-46 |
| MS.gene053171 | MS.gene06258 | 0.842281 | 2.85E-58 | -1.69E-46 |
| MS.gene053171 | MS.gene064161 | 0.822846 | 1.90E-53 | -1.69E-46 |
| MS.gene053171 | MS.gene064243 | 0.841998 | 3.38E-58 | -1.69E-46 |
| MS.gene053171 | MS.gene064737 | 0.815349 | 9.68E-52 | -1.69E-46 |
| MS.gene053171 | MS.gene065055 | 0.806776 | 6.98E-50 | -1.69E-46 |
| MS.gene053171 | MS.gene066196 | 0.820941 | 5.26E-53 | -1.69E-46 |
| MS.gene053171 | MS.gene067778 | 0.804351 | 2.25E-49 | -1.69E-46 |
| MS.gene053171 | MS.gene068022 | 0.85277 | 3.71E-61 | -1.69E-46 |
| MS.gene053171 | MS.gene068925 | 0.834886 | 2.31E-56 | -1.69E-46 |
| MS.gene053171 | MS.gene070339 | 0.837291 | 5.67E-57 | -1.69E-46 |
| MS.gene053171 | MS.gene070409 | 0.809501 | 1.83E-50 | -1.69E-46 |
| MS.gene053171 | MS.gene07059 | 0.800849 | 1.19E-48 | -1.69E-46 |
| MS.gene053171 | MS.gene070885 | 0.813875 | 2.05E-51 | -1.69E-46 |
| MS.gene053171 | MS.gene071096 | 0.800307 | 1.53E-48 | -1.69E-46 |
| MS.gene053171 | MS.gene071652 | 0.813422 | 2.58E-51 | -1.69E-46 |
| MS.gene053171 | MS.gene072641 | 0.807928 | 3.98E-50 | -1.69E-46 |
| MS.gene053171 | MS.gene072905 | 0.813774 | 2.16E-51 | -1.69E-46 |
| MS.gene053171 | MS.gene073288 | 0.805772 | 1.14E-49 | -1.69E-46 |
| MS.gene053171 | MS.gene07359 | 0.800157 | 1.64E-48 | -1.69E-46 |
| MS.gene053171 | MS.gene07374 | 0.802942 | 4.42E-49 | -1.69E-46 |
| MS.gene053171 | MS.gene074172 | 0.804953 | 1.69E-49 | -1.69E-46 |
| MS.gene053171 | MS.gene074206 | 0.801467 | 8.88E-49 | -1.69E-46 |
| MS.gene053171 | MS.gene074519 | 0.83174 | 1.41E-55 | -1.69E-46 |
| MS.gene053171 | MS.gene08453 | 0.822601 | 2.17E-53 | -1.69E-46 |
| MS.gene053171 | MS.gene09087 | 0.813089 | 3.05E-51 | -1.69E-46 |
| MS.gene053171 | MS.gene09947 | 0.804462 | 2.14E-49 | -1.69E-46 |
| MS.gene053171 | MS.gene20002 | 0.806251 | 9.01E-50 | -1.69E-46 |
| MS.gene053171 | MS.gene20003 | 0.810156 | 1.33E-50 | -1.69E-46 |
| MS.gene053171 | MS.gene20004 | 0.867113 | 1.74E-65 | -1.69E-46 |
| MS.gene053171 | MS.gene20061 | 0.816438 | 5.53E-52 | -1.69E-46 |
| MS.gene053171 | MS.gene20335 | 0.840929 | 6.47E-58 | -1.69E-46 |
| MS.gene053171 | MS.gene20457 | 0.814283 | 1.67E-51 | -1.69E-46 |
| MS.gene053171 | MS.gene20637 | 0.80828 | 3.35E-50 | -1.69E-46 |
| MS.gene053171 | MS.gene20903 | 0.839357 | 1.66E-57 | -1.69E-46 |
| MS.gene053171 | MS.gene20920 | 0.804969 | 1.67E-49 | -1.69E-46 |
| MS.gene053171 | MS.gene21144 | 0.80846 | 3.06E-50 | -1.69E-46 |
| MS.gene053171 | MS.gene21826 | 0.805345 | 1.40E-49 | -1.69E-46 |
| MS.gene053171 | MS.gene22436 | 0.808327 | 3.27E-50 | -1.69E-46 |
| MS.gene053171 | MS.gene23766 | 0.81711 | 3.91E-52 | -1.69E-46 |
| MS.gene053171 | MS.gene24822 | 0.806894 | 6.59E-50 | -1.69E-46 |
| MS.gene053171 | MS.gene25038 | 0.824566 | 7.53E-54 | -1.69E-46 |
| MS.gene053171 | MS.gene26380 | 0.864261 | 1.38E-64 | -1.69E-46 |
| MS.gene053171 | MS.gene26387 | 0.809991 | 1.44E-50 | -1.69E-46 |
| MS.gene053171 | MS.gene26659 | 0.84492 | 5.61E-59 | -1.69E-46 |
| MS.gene053171 | MS.gene26801 | 0.82331 | 1.48E-53 | -1.69E-46 |
| MS.gene053171 | MS.gene26851 | 0.813097 | 3.04E-51 | -1.69E-46 |
| MS.gene053171 | MS.gene26855 | 0.808452 | 3.08E-50 | -1.69E-46 |
| MS.gene053171 | MS.gene27222 | 0.827206 | 1.78E-54 | -1.69E-46 |
| MS.gene053171 | MS.gene27646 | -0.827373 | 1.62E-54 | -1.69E-46 |
| MS.gene053171 | MS.gene27700 | 0.812246 | 4.67E-51 | -1.69E-46 |
| MS.gene053171 | MS.gene27831 | 0.825964 | 3.52E-54 | -1.69E-46 |
| MS.gene053171 | MS.gene28611 | 0.806456 | 8.15E-50 | -1.69E-46 |
| MS.gene053171 | MS.gene28717 | 0.816991 | 4.16E-52 | -1.69E-46 |
| MS.gene053171 | MS.gene28813 | 0.813868 | 2.06E-51 | -1.69E-46 |
| MS.gene053171 | MS.gene28979 | 0.849304 | 3.52E-60 | -1.69E-46 |
| MS.gene053171 | MS.gene29355 | 0.806543 | 7.82E-50 | -1.69E-46 |
| MS.gene053171 | MS.gene31139 | 0.845561 | 3.76E-59 | -1.69E-46 |
| MS.gene053171 | MS.gene31203 | 0.836302 | 1.01E-56 | -1.69E-46 |
| MS.gene053171 | MS.gene31204 | 0.834828 | 2.39E-56 | -1.69E-46 |
| MS.gene053171 | MS.gene31433 | 0.813322 | 2.71E-51 | -1.69E-46 |
| MS.gene053171 | MS.gene31466 | 0.803333 | 3.66E-49 | -1.69E-46 |
| MS.gene053171 | MS.gene32690 | 0.802539 | 5.35E-49 | -1.69E-46 |
| MS.gene053171 | MS.gene32853 | 0.820489 | 6.68E-53 | -1.69E-46 |
| MS.gene053171 | MS.gene34057 | 0.801055 | 1.08E-48 | -1.69E-46 |
| MS.gene053171 | MS.gene34164 | 0.81883 | 1.60E-52 | -1.69E-46 |
| MS.gene053171 | MS.gene34286 | 0.85742 | 1.65E-62 | -1.69E-46 |
| MS.gene053171 | MS.gene36265 | 0.846485 | 2.11E-59 | -1.69E-46 |
| MS.gene053171 | MS.gene36285 | 0.845619 | 3.63E-59 | -1.69E-46 |
| MS.gene053171 | MS.gene37011 | 0.802738 | 4.86E-49 | -1.69E-46 |
| MS.gene053171 | MS.gene37459 | 0.811799 | 5.84E-51 | -1.69E-46 |
| MS.gene053171 | MS.gene38302 | 0.820188 | 7.82E-53 | -1.69E-46 |
| MS.gene053171 | MS.gene38303 | 0.859886 | 3.03E-63 | -1.69E-46 |
| MS.gene053171 | MS.gene38829 | 0.829617 | 4.66E-55 | -1.69E-46 |
| MS.gene053171 | MS.gene39046 | 0.806532 | 7.86E-50 | -1.69E-46 |
| MS.gene053171 | MS.gene40093 | 0.804801 | 1.81E-49 | -1.69E-46 |
| MS.gene053171 | MS.gene40409 | 0.806672 | 7.34E-50 | -1.69E-46 |
| MS.gene053171 | MS.gene40739 | 0.826118 | 3.23E-54 | -1.69E-46 |
| MS.gene053171 | MS.gene41651 | 0.852219 | 5.33E-61 | -1.69E-46 |
| MS.gene053171 | MS.gene41692 | 0.801887 | 7.28E-49 | -1.69E-46 |
| MS.gene053171 | MS.gene42377 | 0.828783 | 7.42E-55 | -1.69E-46 |
| MS.gene053171 | MS.gene44326 | 0.800188 | 1.62E-48 | -1.69E-46 |
| MS.gene053171 | MS.gene45281 | 0.826631 | 2.44E-54 | -1.69E-46 |
| MS.gene053171 | MS.gene47498 | 0.815266 | 1.01E-51 | -1.69E-46 |
| MS.gene053171 | MS.gene49883 | 0.800123 | 1.67E-48 | -1.69E-46 |
| MS.gene053171 | MS.gene50564 | 0.810689 | 1.02E-50 | -1.69E-46 |
| MS.gene053171 | MS.gene51384 | 0.815409 | 9.38E-52 | -1.69E-46 |
| MS.gene053171 | MS.gene52155 | 0.813728 | 2.21E-51 | -1.69E-46 |
| MS.gene053171 | MS.gene54669 | 0.811839 | 5.73E-51 | -1.69E-46 |
| MS.gene053171 | MS.gene55423 | 0.84655 | 2.02E-59 | -1.69E-46 |
| MS.gene053171 | MS.gene55425 | 0.830128 | 3.50E-55 | -1.69E-46 |
| MS.gene053171 | MS.gene55426 | 0.809543 | 1.80E-50 | -1.69E-46 |
| MS.gene053171 | MS.gene55623 | 0.852348 | 4.90E-61 | -1.69E-46 |
| MS.gene053171 | MS.gene55904 | 0.818049 | 2.40E-52 | -1.69E-46 |
| MS.gene053171 | MS.gene56476 | 0.842127 | 3.13E-58 | -1.69E-46 |
| MS.gene053171 | MS.gene57088 | 0.81399 | 1.94E-51 | -1.69E-46 |
| MS.gene053171 | MS.gene57609 | 0.807924 | 3.99E-50 | -1.69E-46 |
| MS.gene053171 | MS.gene58214 | 0.826109 | 3.25E-54 | -1.69E-46 |
| MS.gene053171 | MS.gene58836 | 0.837069 | 6.46E-57 | -1.69E-46 |
| MS.gene053171 | MS.gene59241 | 0.837427 | 5.23E-57 | -1.69E-46 |
| MS.gene053171 | MS.gene59242 | 0.840757 | 7.18E-58 | -1.69E-46 |
| MS.gene053171 | MS.gene60539 | 0.804329 | 2.28E-49 | -1.69E-46 |
| MS.gene053171 | MS.gene60540 | 0.832234 | 1.06E-55 | -1.69E-46 |
| MS.gene053171 | MS.gene61226 | 0.800962 | 1.13E-48 | -1.69E-46 |
| MS.gene053171 | MS.gene61267 | 0.803959 | 2.72E-49 | -1.69E-46 |
| MS.gene053171 | MS.gene62423 | 0.814934 | 1.20E-51 | -1.69E-46 |
| MS.gene053171 | MS.gene62806 | 0.820307 | 7.35E-53 | -1.69E-46 |
| MS.gene053171 | MS.gene62916 | 0.825211 | 5.30E-54 | -1.69E-46 |
| MS.gene053171 | MS.gene62924 | 0.807892 | 4.05E-50 | -1.69E-46 |
| MS.gene053171 | MS.gene64763 | 0.843882 | 1.07E-58 | -1.69E-46 |
| MS.gene053171 | MS.gene65433 | 0.941606 | 3.11E-101 | -1.69E-46 |
| MS.gene053171 | MS.gene66156 | 0.841505 | 4.56E-58 | -1.69E-46 |
| MS.gene053171 | MS.gene66159 | 0.801883 | 7.30E-49 | -1.69E-46 |
| MS.gene053171 | MS.gene66409 | 0.801458 | 8.92E-49 | -1.69E-46 |
| MS.gene053171 | MS.gene66801 | 0.824493 | 7.84E-54 | -1.69E-46 |
| MS.gene053171 | MS.gene66803 | 0.810529 | 1.10E-50 | -1.69E-46 |
| MS.gene053171 | MS.gene67881 | 0.829082 | 6.28E-55 | -1.69E-46 |
| MS.gene053171 | MS.gene68060 | 0.817218 | 3.70E-52 | -1.69E-46 |
| MS.gene053171 | MS.gene68106 | 0.856036 | 4.22E-62 | -1.69E-46 |
| MS.gene053171 | MS.gene68107 | 0.832023 | 1.20E-55 | -1.69E-46 |
| MS.gene053171 | MS.gene68418 | 0.853308 | 2.60E-61 | -1.69E-46 |
| MS.gene053171 | MS.gene68420 | 0.856564 | 2.95E-62 | -1.69E-46 |
| MS.gene053171 | MS.gene68611 | 0.824129 | 9.54E-54 | -1.69E-46 |
| MS.gene053171 | MS.gene69422 | 0.840566 | 8.05E-58 | -1.69E-46 |
| MS.gene053171 | MS.gene71807 | 0.808872 | 2.50E-50 | -1.69E-46 |
| MS.gene053171 | MS.gene72136 | 0.807014 | 6.22E-50 | -1.69E-46 |
| MS.gene053171 | MS.gene72170 | 0.818167 | 2.26E-52 | -1.69E-46 |
| MS.gene053171 | MS.gene72367 | 0.804896 | 1.73E-49 | -1.69E-46 |
| MS.gene053171 | MS.gene72986 | 0.815439 | 9.24E-52 | -1.69E-46 |
| MS.gene053171 | MS.gene74235 | 0.816794 | 4.60E-52 | -1.69E-46 |
| MS.gene053171 | MS.gene74606 | 0.816599 | 5.09E-52 | -1.69E-46 |
| MS.gene053171 | MS.gene74972 | 0.807653 | 4.55E-50 | -1.69E-46 |
| MS.gene053171 | MS.gene75205 | 0.812098 | 5.03E-51 | -1.69E-46 |
| MS.gene053171 | MS.gene75604 | 0.815623 | 8.41E-52 | -1.69E-46 |
| MS.gene053171 | MS.gene75670 | 0.820788 | 5.70E-53 | -1.69E-46 |
| MS.gene053171 | MS.gene76227 | 0.80469 | 1.91E-49 | -1.69E-46 |
| MS.gene053171 | MS.gene76314 | 0.819356 | 1.21E-52 | -1.69E-46 |
| MS.gene053171 | MS.gene77531 | 0.812648 | 3.81E-51 | -1.69E-46 |
| MS.gene053171 | MS.gene78469 | 0.807581 | 4.71E-50 | -1.69E-46 |
| MS.gene053171 | MS.gene79607 | 0.813576 | 2.39E-51 | -1.69E-46 |
| MS.gene053171 | MS.gene81043 | 0.817368 | 3.42E-52 | -1.69E-46 |
| MS.gene053171 | MS.gene82546 | 0.80151 | 8.71E-49 | -1.69E-46 |
| MS.gene053171 | MS.gene82912 | 0.809375 | 1.95E-50 | -1.69E-46 |
| MS.gene053171 | MS.gene83345 | 0.811663 | 6.26E-51 | -1.69E-46 |
| MS.gene053171 | MS.gene84426 | 0.820422 | 6.92E-53 | -1.69E-46 |
| MS.gene053171 | MS.gene84824 | 0.822221 | 2.66E-53 | -1.69E-46 |
| MS.gene053171 | MS.gene85281 | 0.807793 | 4.25E-50 | -1.69E-46 |
| MS.gene053171 | MS.gene88718 | 0.808504 | 3.00E-50 | -1.69E-46 |
| MS.gene053171 | MS.gene89081 | 0.829528 | 4.90E-55 | -1.69E-46 |
| MS.gene053171 | MS.gene89099 | 0.805905 | 1.07E-49 | -1.69E-46 |
| MS.gene053171 | MS.gene89100 | 0.837687 | 4.49E-57 | -1.69E-46 |
| MS.gene053171 | MS.gene89974 | 0.804631 | 1.97E-49 | -1.69E-46 |
| MS.gene053171 | MS.gene90778 | 0.803711 | 3.06E-49 | -1.69E-46 |
| MS.gene053171 | MS.gene90880 | 0.814444 | 1.54E-51 | -1.69E-46 |
| MS.gene053171 | MS.gene92578 | 0.819504 | 1.12E-52 | -1.69E-46 |
| MS.gene053171 | MS.gene95243 | 0.800388 | 1.48E-48 | -1.69E-46 |
| MS.gene053171 | MS.gene95401 | 0.810825 | 9.51E-51 | -1.69E-46 |
| MS.gene053171 | MS.gene96190 | 0.802572 | 5.26E-49 | -1.69E-46 |
| MS.gene053171 | MS.gene98395 | 0.812212 | 4.75E-51 | -1.69E-46 |
| MS.gene053171 | MS.gene98540 | 0.800076 | 1.71E-48 | -1.69E-46 |
| MS.gene053171 | MS.gene98721 | 0.806206 | 9.21E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053171.t1 | MTR_4g007770 | 94.167 | 240 | 13 | 1 | 11 | 249 | 74 | 313 | 5.84e-166 | 462 |
| MS.gene053171.t1 | MTR_4g130270 | 56.250 | 272 | 82 | 5 | 11 | 254 | 88 | 350 | 8.10e-88 | 265 |
| MS.gene053171.t1 | MTR_2g460730 | 57.519 | 266 | 65 | 7 | 11 | 239 | 85 | 339 | 4.48e-81 | 248 |
| MS.gene053171.t1 | MTR_7g009410 | 71.918 | 146 | 39 | 1 | 11 | 156 | 103 | 246 | 3.28e-71 | 223 |
| MS.gene053171.t1 | MTR_6g011490 | 77.099 | 131 | 30 | 0 | 11 | 141 | 99 | 229 | 4.79e-70 | 220 |
| MS.gene053171.t1 | MTR_8g044070 | 54.286 | 210 | 69 | 3 | 11 | 220 | 93 | 275 | 8.50e-70 | 221 |
| MS.gene053171.t1 | MTR_8g468920 | 78.519 | 135 | 29 | 0 | 11 | 145 | 107 | 241 | 5.62e-65 | 207 |
| MS.gene053171.t1 | MTR_8g044040 | 76.866 | 134 | 31 | 0 | 11 | 144 | 94 | 227 | 1.77e-64 | 206 |
| MS.gene053171.t1 | MTR_4g127930 | 70.079 | 127 | 38 | 0 | 11 | 137 | 200 | 326 | 3.20e-60 | 198 |
| MS.gene053171.t1 | MTR_7g080460 | 69.291 | 127 | 39 | 0 | 11 | 137 | 300 | 426 | 4.95e-57 | 193 |
| MS.gene053171.t1 | MTR_7g080460 | 39.759 | 83 | 42 | 1 | 63 | 137 | 250 | 332 | 5.59e-11 | 62.8 |
| MS.gene053171.t1 | MTR_4g065370 | 67.717 | 127 | 41 | 0 | 11 | 137 | 204 | 330 | 5.08e-57 | 191 |
| MS.gene053171.t1 | MTR_2g098180 | 66.929 | 127 | 42 | 0 | 11 | 137 | 208 | 334 | 2.29e-56 | 188 |
| MS.gene053171.t1 | MTR_2g098180 | 39.326 | 89 | 46 | 1 | 57 | 137 | 152 | 240 | 7.94e-11 | 62.0 |
| MS.gene053171.t1 | MTR_1g017400 | 68.504 | 127 | 40 | 0 | 11 | 137 | 350 | 476 | 2.31e-56 | 191 |
| MS.gene053171.t1 | MTR_8g020510 | 66.929 | 127 | 42 | 0 | 11 | 137 | 286 | 412 | 1.46e-55 | 187 |
| MS.gene053171.t1 | MTR_5g015070 | 66.929 | 127 | 42 | 0 | 11 | 137 | 290 | 416 | 1.57e-55 | 187 |
| MS.gene053171.t1 | MTR_5g015070 | 37.363 | 91 | 49 | 1 | 55 | 137 | 232 | 322 | 5.32e-11 | 62.8 |
| MS.gene053171.t1 | MTR_3g103460 | 66.929 | 127 | 42 | 0 | 11 | 137 | 348 | 474 | 8.06e-55 | 187 |
| MS.gene053171.t1 | MTR_4g097520 | 66.929 | 127 | 42 | 0 | 11 | 137 | 348 | 474 | 1.17e-54 | 186 |
| MS.gene053171.t1 | MTR_8g068510 | 66.929 | 127 | 42 | 0 | 11 | 137 | 169 | 295 | 2.00e-54 | 180 |
| MS.gene053171.t1 | MTR_5g031880 | 69.291 | 127 | 39 | 0 | 11 | 137 | 262 | 388 | 1.11e-46 | 162 |
| MS.gene053171.t1 | MTR_7g061190 | 51.220 | 123 | 58 | 2 | 27 | 149 | 25 | 145 | 9.32e-34 | 120 |
| MS.gene053171.t1 | MTR_7g100590 | 46.795 | 156 | 68 | 4 | 27 | 182 | 183 | 323 | 3.49e-33 | 125 |
| MS.gene053171.t1 | MTR_4g094868 | 46.452 | 155 | 71 | 3 | 27 | 180 | 220 | 363 | 8.89e-33 | 125 |
| MS.gene053171.t1 | MTR_4g094868 | 42.262 | 168 | 95 | 2 | 27 | 193 | 64 | 230 | 1.55e-32 | 122 |
| MS.gene053171.t1 | MTR_4g094868 | 45.806 | 155 | 71 | 3 | 27 | 180 | 220 | 362 | 7.58e-32 | 122 |
| MS.gene053171.t1 | MTR_5g016810 | 47.143 | 140 | 65 | 2 | 27 | 166 | 196 | 326 | 2.59e-31 | 121 |
| MS.gene053171.t1 | MTR_2g093060 | 46.707 | 167 | 75 | 3 | 11 | 177 | 162 | 314 | 4.02e-31 | 120 |
| MS.gene053171.t1 | MTR_2g093060 | 46.707 | 167 | 75 | 3 | 11 | 177 | 162 | 314 | 4.11e-31 | 120 |
| MS.gene053171.t1 | MTR_4g061200 | 43.791 | 153 | 72 | 3 | 27 | 179 | 175 | 313 | 9.73e-30 | 115 |
| MS.gene053171.t1 | MTR_4g061200 | 43.791 | 153 | 72 | 3 | 27 | 179 | 175 | 313 | 2.35e-29 | 115 |
| MS.gene053171.t1 | MTR_5g016810 | 46.296 | 162 | 72 | 3 | 11 | 166 | 180 | 332 | 1.48e-28 | 113 |
| MS.gene053171.t1 | MTR_2g093060 | 42.515 | 167 | 67 | 4 | 11 | 177 | 162 | 299 | 2.71e-22 | 95.5 |
| MS.gene053171.t1 | MTR_7g091390 | 60.440 | 91 | 31 | 1 | 11 | 101 | 7 | 92 | 9.53e-22 | 92.8 |
| MS.gene053171.t1 | MTR_7g091390 | 44.828 | 145 | 69 | 3 | 11 | 154 | 95 | 229 | 3.52e-21 | 92.0 |
| MS.gene053171.t1 | MTR_4g061200 | 39.216 | 153 | 64 | 4 | 27 | 179 | 175 | 298 | 9.62e-21 | 90.5 |
| MS.gene053171.t1 | MTR_4g061200 | 40.223 | 179 | 72 | 5 | 7 | 179 | 149 | 298 | 1.65e-20 | 90.5 |
| MS.gene053171.t1 | MTR_3g090510 | 46.957 | 115 | 59 | 2 | 4 | 118 | 157 | 269 | 1.96e-19 | 87.0 |
| MS.gene053171.t1 | MTR_7g060560 | 42.391 | 92 | 51 | 2 | 27 | 118 | 172 | 261 | 2.64e-16 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene053171.t1 | AT1G79700 | 62.025 | 237 | 60 | 7 | 11 | 246 | 14 | 221 | 2.50e-72 | 221 |
| MS.gene053171.t1 | AT1G79700 | 62.025 | 237 | 60 | 7 | 11 | 246 | 8 | 215 | 2.92e-72 | 221 |
| MS.gene053171.t1 | AT1G16060 | 59.829 | 234 | 91 | 2 | 11 | 243 | 26 | 257 | 3.61e-72 | 222 |
| MS.gene053171.t1 | AT1G16060 | 58.943 | 246 | 74 | 5 | 11 | 243 | 96 | 327 | 2.54e-71 | 222 |
| MS.gene053171.t1 | AT1G79700 | 62.025 | 237 | 60 | 7 | 11 | 246 | 90 | 297 | 3.04e-71 | 221 |
| MS.gene053171.t1 | AT3G54320 | 79.104 | 134 | 28 | 0 | 11 | 144 | 37 | 170 | 2.49e-63 | 202 |
| MS.gene053171.t1 | AT3G54320 | 79.104 | 134 | 28 | 0 | 11 | 144 | 37 | 170 | 2.49e-63 | 202 |
| MS.gene053171.t1 | AT3G54320 | 79.104 | 134 | 28 | 0 | 11 | 144 | 103 | 236 | 1.54e-62 | 202 |
| MS.gene053171.t1 | AT3G54320 | 79.104 | 134 | 28 | 0 | 11 | 144 | 103 | 236 | 2.26e-62 | 202 |
| MS.gene053171.t1 | AT1G79700 | 57.806 | 237 | 60 | 8 | 11 | 246 | 90 | 287 | 6.70e-60 | 192 |
| MS.gene053171.t1 | AT5G57390 | 63.699 | 146 | 42 | 1 | 11 | 145 | 123 | 268 | 9.42e-60 | 195 |
| MS.gene053171.t1 | AT5G57390 | 63.699 | 146 | 42 | 1 | 11 | 145 | 241 | 386 | 4.73e-59 | 196 |
| MS.gene053171.t1 | AT1G16060 | 56.039 | 207 | 64 | 5 | 50 | 243 | 1 | 193 | 4.42e-58 | 184 |
| MS.gene053171.t1 | AT1G16060 | 56.039 | 207 | 64 | 5 | 50 | 243 | 1 | 193 | 4.42e-58 | 184 |
| MS.gene053171.t1 | AT1G16060 | 56.039 | 207 | 64 | 5 | 50 | 243 | 1 | 193 | 4.42e-58 | 184 |
| MS.gene053171.t1 | AT1G16060 | 56.039 | 207 | 64 | 5 | 50 | 243 | 1 | 193 | 4.42e-58 | 184 |
| MS.gene053171.t1 | AT1G72570 | 67.717 | 127 | 41 | 0 | 11 | 137 | 261 | 387 | 3.46e-57 | 188 |
| MS.gene053171.t1 | AT4G37750 | 68.504 | 127 | 40 | 0 | 11 | 137 | 321 | 447 | 3.39e-56 | 189 |
| MS.gene053171.t1 | AT1G51190 | 66.142 | 127 | 43 | 0 | 11 | 137 | 228 | 354 | 3.74e-56 | 189 |
| MS.gene053171.t1 | AT5G17430 | 68.504 | 127 | 40 | 0 | 11 | 137 | 186 | 312 | 5.73e-56 | 187 |
| MS.gene053171.t1 | AT5G17430 | 68.504 | 127 | 40 | 0 | 11 | 137 | 248 | 374 | 1.14e-55 | 188 |
| MS.gene053171.t1 | AT3G20840 | 63.780 | 127 | 46 | 0 | 11 | 137 | 219 | 345 | 1.71e-54 | 184 |
| MS.gene053171.t1 | AT5G65510 | 68.504 | 127 | 40 | 0 | 11 | 137 | 211 | 337 | 2.54e-47 | 163 |
| MS.gene053171.t1 | AT5G65510 | 68.504 | 127 | 40 | 0 | 11 | 137 | 269 | 395 | 4.18e-47 | 163 |
| MS.gene053171.t1 | AT5G65510 | 68.504 | 127 | 40 | 0 | 11 | 137 | 269 | 395 | 4.18e-47 | 163 |
| MS.gene053171.t1 | AT5G10510 | 66.142 | 127 | 43 | 0 | 11 | 137 | 265 | 391 | 2.58e-45 | 159 |
| MS.gene053171.t1 | AT5G10510 | 66.142 | 127 | 43 | 0 | 11 | 137 | 268 | 394 | 2.89e-45 | 159 |
| MS.gene053171.t1 | AT5G10510 | 66.142 | 127 | 43 | 0 | 11 | 137 | 268 | 394 | 2.89e-45 | 159 |
| MS.gene053171.t1 | AT5G10510 | 65.385 | 130 | 45 | 0 | 8 | 137 | 323 | 452 | 3.93e-45 | 160 |
| MS.gene053171.t1 | AT5G10510 | 66.142 | 127 | 43 | 0 | 11 | 137 | 291 | 417 | 4.38e-45 | 159 |
| MS.gene053171.t1 | AT5G10510 | 66.142 | 127 | 43 | 0 | 11 | 137 | 306 | 432 | 4.85e-45 | 159 |
| MS.gene053171.t1 | AT5G10510 | 66.142 | 127 | 43 | 0 | 11 | 137 | 306 | 432 | 4.85e-45 | 159 |
| MS.gene053171.t1 | AT3G54320 | 83.158 | 95 | 16 | 0 | 50 | 144 | 1 | 95 | 6.52e-44 | 150 |
| MS.gene053171.t1 | AT5G65510 | 67.010 | 97 | 32 | 0 | 11 | 107 | 211 | 307 | 2.51e-39 | 139 |
| MS.gene053171.t1 | AT1G16060 | 48.824 | 170 | 84 | 2 | 75 | 243 | 4 | 171 | 4.78e-36 | 127 |
| MS.gene053171.t1 | AT2G28550 | 39.474 | 190 | 98 | 3 | 27 | 214 | 197 | 371 | 1.00e-33 | 127 |
| MS.gene053171.t1 | AT4G36920 | 43.871 | 155 | 74 | 3 | 27 | 169 | 175 | 328 | 7.17e-31 | 119 |
| MS.gene053171.t1 | AT4G36920 | 43.871 | 155 | 74 | 3 | 27 | 169 | 175 | 328 | 7.17e-31 | 119 |
| MS.gene053171.t1 | AT5G67180 | 50.450 | 111 | 54 | 1 | 27 | 137 | 140 | 249 | 3.53e-29 | 112 |
| MS.gene053171.t1 | AT5G67180 | 50.450 | 111 | 54 | 1 | 27 | 137 | 140 | 249 | 4.36e-29 | 111 |
| MS.gene053171.t1 | AT5G67180 | 50.450 | 111 | 54 | 1 | 27 | 137 | 140 | 249 | 9.88e-29 | 112 |
| MS.gene053171.t1 | AT2G28550 | 35.789 | 190 | 90 | 4 | 27 | 214 | 31 | 190 | 1.65e-25 | 102 |
| MS.gene053171.t1 | AT2G28550 | 35.789 | 190 | 90 | 4 | 27 | 214 | 197 | 356 | 9.08e-25 | 102 |
| MS.gene053171.t1 | AT2G28550 | 50.575 | 87 | 42 | 1 | 27 | 113 | 197 | 282 | 1.45e-22 | 95.1 |
| MS.gene053171.t1 | AT2G41710 | 46.923 | 130 | 60 | 2 | 11 | 140 | 108 | 228 | 4.96e-21 | 92.0 |
| MS.gene053171.t1 | AT2G41710 | 46.923 | 130 | 60 | 2 | 11 | 140 | 108 | 228 | 6.50e-21 | 91.3 |
| MS.gene053171.t1 | AT2G41710 | 42.000 | 150 | 78 | 2 | 11 | 160 | 143 | 283 | 9.64e-21 | 91.3 |
| MS.gene053171.t1 | AT5G67180 | 49.057 | 106 | 53 | 1 | 11 | 116 | 124 | 228 | 4.62e-20 | 86.7 |
| MS.gene053171.t1 | AT2G41710 | 45.185 | 135 | 60 | 3 | 11 | 140 | 108 | 233 | 1.10e-18 | 85.1 |
| MS.gene053171.t1 | AT2G28550 | 50.685 | 73 | 35 | 1 | 27 | 99 | 197 | 268 | 5.51e-17 | 78.6 |
| MS.gene053171.t1 | AT2G28550 | 50.685 | 73 | 35 | 1 | 27 | 99 | 197 | 268 | 5.51e-17 | 78.6 |
| MS.gene053171.t1 | AT2G39250 | 43.284 | 67 | 38 | 0 | 11 | 77 | 136 | 202 | 1.78e-11 | 62.8 |
| MS.gene053171.t1 | AT5G60120 | 35.577 | 104 | 51 | 2 | 27 | 130 | 204 | 291 | 2.03e-11 | 63.9 |
| MS.gene053171.t1 | AT5G60120 | 35.577 | 104 | 51 | 2 | 27 | 130 | 204 | 291 | 2.25e-11 | 63.9 |
| MS.gene053171.t1 | AT5G60120 | 35.577 | 104 | 51 | 2 | 27 | 130 | 204 | 291 | 2.50e-11 | 63.5 |
| MS.gene053171.t1 | AT2G39250 | 43.284 | 67 | 38 | 0 | 11 | 77 | 136 | 202 | 2.61e-11 | 63.2 |
| MS.gene053171.t1 | AT5G60120 | 35.577 | 104 | 51 | 2 | 27 | 130 | 204 | 291 | 4.05e-11 | 62.8 |
| MS.gene053171.t1 | AT5G60120 | 35.577 | 104 | 51 | 2 | 27 | 130 | 204 | 291 | 4.05e-11 | 62.8 |
| MS.gene053171.t1 | AT5G60120 | 35.577 | 104 | 51 | 2 | 27 | 130 | 204 | 291 | 4.05e-11 | 62.8 |
| MS.gene053171.t1 | AT4G27950 | 33.333 | 120 | 69 | 3 | 59 | 175 | 101 | 212 | 5.47e-11 | 62.4 |
Find 57 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTAACATGTCTTCGAATTT+TGG | 0.115041 | 4.2:+92050777 | None:intergenic |
| TATTTATACCTTGGAACTTA+TGG | 0.227175 | 4.2:-92053742 | MS.gene053171:intron |
| TCGTCGTTGTCTTGTGGTTT+AGG | 0.271322 | 4.2:+92050909 | None:intergenic |
| AATGATGATGACAACATATT+TGG | 0.301779 | 4.2:-92050627 | MS.gene053171:intron |
| AAAATTGTTTGAATATCTTC+TGG | 0.307325 | 4.2:+92050681 | None:intergenic |
| TTAATAACTAAACCTTCTTA+AGG | 0.317560 | 4.2:+92055951 | None:intergenic |
| GCTCGAATTGGCAGGGTCTT+CGG | 0.404820 | 4.2:-92053772 | MS.gene053171:CDS |
| GGCAACAAATATTTATACCT+TGG | 0.417814 | 4.2:-92053751 | MS.gene053171:CDS |
| ACTTGGCAGCATTGAAGTAC+TGG | 0.425678 | 4.2:-92056239 | MS.gene053171:CDS |
| CTTCAATGCTGCCAAGTCAT+AGG | 0.425738 | 4.2:+92056245 | None:intergenic |
| AATATATTGGATCCTTAAGA+AGG | 0.444800 | 4.2:-92055963 | MS.gene053171:intron |
| GATGGGAAGCTCGAATTGGC+AGG | 0.455003 | 4.2:-92053780 | MS.gene053171:CDS |
| CAGTCAAAAGAAGAATATAT+TGG | 0.457176 | 4.2:-92055976 | MS.gene053171:CDS |
| CTCGACCATGGTCAACGCTC+TGG | 0.467177 | 4.2:+92045234 | None:intergenic |
| CGTGGAATGGTTGATTTGAC+AGG | 0.483312 | 4.2:+92050714 | None:intergenic |
| ATTATCAAGAGGAGCTCAAA+GGG | 0.490116 | 4.2:-92056008 | MS.gene053171:CDS |
| GGAAGATGGGAAGCTCGAAT+TGG | 0.493895 | 4.2:-92053784 | MS.gene053171:CDS |
| GACACCACCACAATGGAAGA+TGG | 0.496318 | 4.2:-92053798 | MS.gene053171:CDS |
| CTTGGCAGCATTGAAGTACT+GGG | 0.500070 | 4.2:-92056238 | MS.gene053171:CDS |
| TGCTAGCAATAATCAAGAGC+TGG | 0.512163 | 4.2:-92050865 | MS.gene053171:CDS |
| CTGGATCTTAATCAAGAACT+TGG | 0.515101 | 4.2:-92050846 | MS.gene053171:CDS |
| TGCAGCACGTGCCTATGACT+TGG | 0.516501 | 4.2:-92056256 | MS.gene053171:CDS |
| ATGGCAGCAATAGAGTATAG+AGG | 0.527216 | 4.2:-92050984 | MS.gene053171:CDS |
| GAAAATTGAGAATTGTGTCT+TGG | 0.528761 | 4.2:+92056214 | None:intergenic |
| GTTAGAAAATTCATCGTCAT+CGG | 0.529129 | 4.2:-92050760 | MS.gene053171:CDS |
| TTACTATCGTCGTTGTCTTG+TGG | 0.533843 | 4.2:+92050903 | None:intergenic |
| ATAAGATCAGTCGAAGATGC+TGG | 0.558029 | 4.2:+92050810 | None:intergenic |
| TGGAAATGTCCGACGTGGAA+TGG | 0.559065 | 4.2:+92050701 | None:intergenic |
| TGACACAGAGCTTCTCTACA+AGG | 0.563155 | 4.2:-92045258 | MS.gene053171:intron |
| ATGGTTGATTTGACAGGCGG+TGG | 0.564133 | 4.2:+92050720 | None:intergenic |
| GATCTTAATCAAGAACTTGG+TGG | 0.566882 | 4.2:-92050843 | MS.gene053171:CDS |
| TCAAGAGGAGCTCAAAGGGA+TGG | 0.574531 | 4.2:-92056004 | MS.gene053171:CDS |
| GAGGAGCTCAAAGGGATGGA+AGG | 0.577439 | 4.2:-92056000 | MS.gene053171:CDS |
| CTTCCCATCTTCCATTGTGG+TGG | 0.578979 | 4.2:+92053794 | None:intergenic |
| TGATGGCAATGGAAATCGAT+TGG | 0.579549 | 4.2:-92056612 | MS.gene053171:CDS |
| ACACCACCACAATGGAAGAT+GGG | 0.584570 | 4.2:-92053797 | MS.gene053171:CDS |
| AATTATCAAGAGGAGCTCAA+AGG | 0.585976 | 4.2:-92056009 | MS.gene053171:CDS |
| TGCTGCCATGTCATAAGCTG+TGG | 0.586967 | 4.2:+92050998 | None:intergenic |
| TTAGGTATCAAATTATCAAG+AGG | 0.587787 | 4.2:-92056019 | MS.gene053171:intron |
| GAGCTTCCCATCTTCCATTG+TGG | 0.592861 | 4.2:+92053791 | None:intergenic |
| TGGAAGTACCATAAGTTCCA+AGG | 0.606508 | 4.2:+92053734 | None:intergenic |
| TGGCAGCAATAGAGTATAGA+GGG | 0.606682 | 4.2:-92050983 | MS.gene053171:CDS |
| CTTAATCAAGAACTTGGTGG+TGG | 0.608278 | 4.2:-92050840 | MS.gene053171:CDS |
| ATCAGTCGAAGATGCTGGTG+TGG | 0.611842 | 4.2:+92050815 | None:intergenic |
| ACTAAGATCAAAGTTTGTAA+CGG | 0.614633 | 4.2:+92050953 | None:intergenic |
| CAAAATACAGAGGTGTAGCA+AGG | 0.618939 | 4.2:-92055685 | MS.gene053171:intron |
| ATGGTCAATGCTCTCGACCA+TGG | 0.628729 | 4.2:+92045222 | None:intergenic |
| ATGGGAAGCTCGAATTGGCA+GGG | 0.643491 | 4.2:-92053779 | MS.gene053171:CDS |
| AGCAGCCACAGCTTATGACA+TGG | 0.655956 | 4.2:-92051003 | MS.gene053171:CDS |
| ATGTTTAGACACCACCACAA+TGG | 0.660446 | 4.2:-92053805 | MS.gene053171:intron |
| AAGGTCCAGAGCGTTGACCA+TGG | 0.670531 | 4.2:-92045239 | MS.gene053171:CDS |
| GGAATGGTTGATTTGACAGG+CGG | 0.690559 | 4.2:+92050717 | None:intergenic |
| TCTTCTGGAAATGTCCGACG+TGG | 0.691543 | 4.2:+92050696 | None:intergenic |
| AGAGGAGTCTCAAAATACAG+AGG | 0.710309 | 4.2:-92055695 | MS.gene053171:CDS |
| TTGGCAGCATTGAAGTACTG+GGG | 0.726529 | 4.2:-92056237 | MS.gene053171:CDS |
| TCAAATCAACCATTCCACGT+CGG | 0.751359 | 4.2:-92050710 | MS.gene053171:CDS |
| AACGACGATAGTAACAACCG+TGG | 0.763572 | 4.2:-92050894 | MS.gene053171:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 92045226 | 92056632 | 92045226 | ID=MS.gene053171 |
| chr4.2 | mRNA | 92045226 | 92056632 | 92045226 | ID=MS.gene053171.t1;Parent=MS.gene053171 |
| chr4.2 | exon | 92056605 | 92056632 | 92056605 | ID=MS.gene053171.t1.exon1;Parent=MS.gene053171.t1 |
| chr4.2 | CDS | 92056605 | 92056632 | 92056605 | ID=cds.MS.gene053171.t1;Parent=MS.gene053171.t1 |
| chr4.2 | exon | 92056212 | 92056300 | 92056212 | ID=MS.gene053171.t1.exon2;Parent=MS.gene053171.t1 |
| chr4.2 | CDS | 92056212 | 92056300 | 92056212 | ID=cds.MS.gene053171.t1;Parent=MS.gene053171.t1 |
| chr4.2 | exon | 92055964 | 92056037 | 92055964 | ID=MS.gene053171.t1.exon3;Parent=MS.gene053171.t1 |
| chr4.2 | CDS | 92055964 | 92056037 | 92055964 | ID=cds.MS.gene053171.t1;Parent=MS.gene053171.t1 |
| chr4.2 | exon | 92055686 | 92055736 | 92055686 | ID=MS.gene053171.t1.exon4;Parent=MS.gene053171.t1 |
| chr4.2 | CDS | 92055686 | 92055736 | 92055686 | ID=cds.MS.gene053171.t1;Parent=MS.gene053171.t1 |
| chr4.2 | exon | 92053743 | 92053819 | 92053743 | ID=MS.gene053171.t1.exon5;Parent=MS.gene053171.t1 |
| chr4.2 | CDS | 92053743 | 92053819 | 92053743 | ID=cds.MS.gene053171.t1;Parent=MS.gene053171.t1 |
| chr4.2 | exon | 92050628 | 92051038 | 92050628 | ID=MS.gene053171.t1.exon6;Parent=MS.gene053171.t1 |
| chr4.2 | CDS | 92050628 | 92051038 | 92050628 | ID=cds.MS.gene053171.t1;Parent=MS.gene053171.t1 |
| chr4.2 | exon | 92045226 | 92045272 | 92045226 | ID=MS.gene053171.t1.exon7;Parent=MS.gene053171.t1 |
| chr4.2 | CDS | 92045226 | 92045272 | 92045226 | ID=cds.MS.gene053171.t1;Parent=MS.gene053171.t1 |
| Gene Sequence |
| Protein sequence |
