Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62619.t1 | XP_003631072.1 | 97.9 | 629 | 13 | 0 | 1 | 629 | 1 | 629 | 0.00E+00 | 1283.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62619.t1 | Q9C9U3 | 70.5 | 623 | 183 | 1 | 7 | 629 | 7 | 628 | 9.0e-278 | 957.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62619.t1 | G7LD99 | 97.9 | 629 | 13 | 0 | 1 | 629 | 1 | 629 | 0.0e+00 | 1283.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050122 | MS.gene62619 | 0.811662 | 6.26E-51 | -1.69E-46 |
| MS.gene051588 | MS.gene62619 | 0.810314 | 1.23E-50 | -1.69E-46 |
| MS.gene052011 | MS.gene62619 | -0.806246 | 9.03E-50 | -1.69E-46 |
| MS.gene053318 | MS.gene62619 | 0.80635 | 8.58E-50 | -1.69E-46 |
| MS.gene053889 | MS.gene62619 | 0.809671 | 1.69E-50 | -1.69E-46 |
| MS.gene054183 | MS.gene62619 | 0.82009 | 8.24E-53 | -1.69E-46 |
| MS.gene054920 | MS.gene62619 | 0.835885 | 1.29E-56 | -1.69E-46 |
| MS.gene055369 | MS.gene62619 | 0.827624 | 1.41E-54 | -1.69E-46 |
| MS.gene055741 | MS.gene62619 | 0.81206 | 5.13E-51 | -1.69E-46 |
| MS.gene055744 | MS.gene62619 | 0.814402 | 1.57E-51 | -1.69E-46 |
| MS.gene055909 | MS.gene62619 | 0.804019 | 2.64E-49 | -1.69E-46 |
| MS.gene055911 | MS.gene62619 | 0.812401 | 4.32E-51 | -1.69E-46 |
| MS.gene056346 | MS.gene62619 | 0.816662 | 4.93E-52 | -1.69E-46 |
| MS.gene056514 | MS.gene62619 | 0.834844 | 2.37E-56 | -1.69E-46 |
| MS.gene058420 | MS.gene62619 | 0.812421 | 4.28E-51 | -1.69E-46 |
| MS.gene059420 | MS.gene62619 | 0.833374 | 5.53E-56 | -1.69E-46 |
| MS.gene059517 | MS.gene62619 | 0.821086 | 4.87E-53 | -1.69E-46 |
| MS.gene059868 | MS.gene62619 | 0.822252 | 2.62E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene62619 | MS.gene20639 | PPI |
| MS.gene57085 | MS.gene62619 | PPI |
| MS.gene62619 | MS.gene54669 | PPI |
| MS.gene62619 | MS.gene57088 | PPI |
| MS.gene62619 | MS.gene20637 | PPI |
| MS.gene62619 | MS.gene54667 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62619.t1 | MTR_8g106800 | 97.933 | 629 | 13 | 0 | 1 | 629 | 1 | 629 | 0.0 | 1290 |
| MS.gene62619.t1 | MTR_6g007767 | 62.600 | 623 | 226 | 2 | 11 | 629 | 21 | 640 | 0.0 | 831 |
| MS.gene62619.t1 | MTR_6g007770 | 65.174 | 603 | 203 | 2 | 31 | 629 | 19 | 618 | 0.0 | 824 |
| MS.gene62619.t1 | MTR_6g007763 | 63.242 | 623 | 225 | 3 | 11 | 629 | 19 | 641 | 0.0 | 813 |
| MS.gene62619.t1 | MTR_6g007767 | 66.468 | 504 | 169 | 0 | 126 | 629 | 2 | 505 | 0.0 | 729 |
| MS.gene62619.t1 | MTR_6g007767 | 62.319 | 552 | 201 | 2 | 11 | 558 | 21 | 569 | 0.0 | 727 |
| MS.gene62619.t1 | MTR_6g007767 | 59.553 | 403 | 156 | 2 | 11 | 409 | 21 | 420 | 3.58e-172 | 496 |
| MS.gene62619.t1 | MTR_6g007767 | 59.406 | 404 | 157 | 2 | 11 | 410 | 21 | 421 | 9.37e-172 | 496 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene62619.t1 | AT1G73680 | 70.111 | 629 | 187 | 1 | 1 | 629 | 1 | 628 | 0.0 | 961 |
| MS.gene62619.t1 | AT1G73680 | 68.339 | 638 | 192 | 2 | 1 | 629 | 1 | 637 | 0.0 | 938 |
| MS.gene62619.t1 | AT1G73680 | 72.500 | 520 | 142 | 1 | 110 | 629 | 1 | 519 | 0.0 | 821 |
| MS.gene62619.t1 | AT3G01420 | 63.344 | 622 | 226 | 2 | 10 | 629 | 15 | 636 | 0.0 | 815 |
| MS.gene62619.t1 | AT1G73680 | 72.211 | 475 | 131 | 1 | 155 | 629 | 1 | 474 | 0.0 | 743 |
Find 154 sgRNAs with CRISPR-Local
Find 236 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGATTCATTTGGAAATATTT+TGG | 0.100271 | 4.2:-584573 | MS.gene62619:CDS |
| AAATCTTCCCACTTACTAAT+TGG | 0.152032 | 4.2:+583863 | None:intergenic |
| TATAGAGGTATGTATTTCTT+AGG | 0.222425 | 4.2:+583410 | None:intergenic |
| CCTCCGACGACTTTAAATTA+TGG | 0.229905 | 4.2:-586238 | MS.gene62619:CDS |
| TCCCTGAGATGACTGAAAAT+TGG | 0.233453 | 4.2:-583478 | MS.gene62619:CDS |
| GGGCAATATACTTGGGAATT+AGG | 0.236418 | 4.2:-586420 | MS.gene62619:CDS |
| GGTATCAAAGAGGGTCATTT+TGG | 0.261310 | 4.2:+586635 | None:intergenic |
| CATAAGCTTCCAGTGTTGTT+GGG | 0.270454 | 4.2:-586442 | MS.gene62619:CDS |
| CATTTGTCTTCTCCTGTTGT+AGG | 0.275032 | 4.2:+584413 | None:intergenic |
| AAGAGTTCACGAGTGTTTAT+AGG | 0.276589 | 4.2:-584481 | MS.gene62619:CDS |
| TTTCCTATCATTTCTGTCAT+TGG | 0.278143 | 4.2:+584217 | None:intergenic |
| TTTCTTTATCTTTGTGATCA+TGG | 0.279891 | 4.2:-583714 | MS.gene62619:CDS |
| ACCAAGGAGTCCTAATGTTT+TGG | 0.297547 | 4.2:+585533 | None:intergenic |
| GGTATGTATTTCTTAGGATT+TGG | 0.300998 | 4.2:+583416 | None:intergenic |
| CATGTGGTGCTGTTACTTTA+TGG | 0.301909 | 4.2:-584129 | MS.gene62619:CDS |
| AAGAAATTCAAAGATTCATT+TGG | 0.309732 | 4.2:-584584 | MS.gene62619:CDS |
| ACCTTCGTTTGTGTATGTTT+TGG | 0.313730 | 4.2:+583553 | None:intergenic |
| AGGGATGGAAGTGTGATATA+TGG | 0.316910 | 4.2:-585173 | MS.gene62619:CDS |
| AAGTCGTCGGAGGCATATTC+CGG | 0.318218 | 4.2:+586248 | None:intergenic |
| CGATCACTTGATCGGTAGTC+AGG | 0.325900 | 4.2:-586284 | MS.gene62619:CDS |
| CTCCGACGACTTTAAATTAT+GGG | 0.335283 | 4.2:-586237 | MS.gene62619:CDS |
| TCAACATGATAGCTTGTTCA+TGG | 0.341489 | 4.2:-586045 | MS.gene62619:CDS |
| TCCAGTTGACATGGCTACTA+TGG | 0.351321 | 4.2:-584044 | MS.gene62619:CDS |
| GGCTCCTCACACATGAAGTT+TGG | 0.354178 | 4.2:-585559 | MS.gene62619:CDS |
| TAGTGGATTAGTTGGTCTTA+AGG | 0.355480 | 4.2:-584540 | MS.gene62619:CDS |
| TACAGTTCATGATTCATGAT+TGG | 0.365374 | 4.2:-586021 | MS.gene62619:CDS |
| AGCTTCGAGGCCACCAGTGC+AGG | 0.374076 | 4.2:+586106 | None:intergenic |
| GGCTGGTTATTCCCTTCTGC+AGG | 0.375799 | 4.2:-585024 | MS.gene62619:CDS |
| AGTTTGGCTTCCAAAACATT+AGG | 0.378367 | 4.2:-585543 | MS.gene62619:CDS |
| AATCTTCCCACTTACTAATT+GGG | 0.380096 | 4.2:+583864 | None:intergenic |
| CTCATTGCACATGATATTGA+TGG | 0.387523 | 4.2:-584082 | MS.gene62619:CDS |
| TGATTGGATTGATCATTTAG+AGG | 0.390749 | 4.2:-586005 | MS.gene62619:CDS |
| AACTCTTCAGTAAGCGAATA+GGG | 0.394166 | 4.2:+584497 | None:intergenic |
| CTACAGTCCAATCAATTGTA+TGG | 0.403949 | 4.2:+584772 | None:intergenic |
| CTACCGATCAAGTGATCGTC+GGG | 0.415701 | 4.2:+586289 | None:intergenic |
| ACTCTATAGGTATGCAAGAT+TGG | 0.417959 | 4.2:-584820 | MS.gene62619:CDS |
| GAACTCTTCAGTAAGCGAAT+AGG | 0.419424 | 4.2:+584496 | None:intergenic |
| ATTTCGAACATCACCGGATA+CGG | 0.419806 | 4.2:+585052 | None:intergenic |
| TCCATAGTAGCCATGTCAAC+TGG | 0.420756 | 4.2:+584043 | None:intergenic |
| TAGTTTATAGAGATAGAGAA+AGG | 0.421895 | 4.2:-583931 | MS.gene62619:CDS |
| AACACTAACATAGAAAAGTA+TGG | 0.422519 | 4.2:+586614 | None:intergenic |
| TGGCATCCATGAGGATCAAC+TGG | 0.432200 | 4.2:-584725 | MS.gene62619:intron |
| AAGACTAAGAAATTTCAAAC+TGG | 0.433686 | 4.2:-585580 | MS.gene62619:CDS |
| TTGATGATGAGCAACTCTAT+AGG | 0.440552 | 4.2:-584833 | MS.gene62619:CDS |
| TCTTTGTGATCATGGCTTCA+AGG | 0.441291 | 4.2:-583706 | MS.gene62619:intron |
| AGTTTATAGAGATAGAGAAA+GGG | 0.446296 | 4.2:-583930 | MS.gene62619:CDS |
| GGGTGGTTGCACGTGCCTGC+CGG | 0.447014 | 4.2:+586310 | None:intergenic |
| GGAGCAAATGTTAGTATCCA+TGG | 0.447899 | 4.2:-584161 | MS.gene62619:CDS |
| CCCTGGTCTCCAACCTCTTG+TGG | 0.448983 | 4.2:-586658 | MS.gene62619:CDS |
| GCCACAAGAGGTTGGAGACC+AGG | 0.457452 | 4.2:+586657 | None:intergenic |
| AGTTGCTCATCATCAAAATC+AGG | 0.460874 | 4.2:+584840 | None:intergenic |
| TCCAAAACATTAGGACTCCT+TGG | 0.461125 | 4.2:-585534 | MS.gene62619:CDS |
| CTTTCTTGCTAGAAGCTTCG+AGG | 0.462793 | 4.2:+586093 | None:intergenic |
| TCATTTAGAGGACACTGAAC+AGG | 0.462942 | 4.2:-585993 | MS.gene62619:intron |
| CCGGTGATGTTCGAAATTCA+TGG | 0.466050 | 4.2:-585046 | MS.gene62619:CDS |
| GCATAAGCTTCCAGTGTTGT+TGG | 0.466181 | 4.2:-586443 | MS.gene62619:CDS |
| CTTAAGGAGCCAAGAGATCA+TGG | 0.466526 | 4.2:-584524 | MS.gene62619:CDS |
| TAGGGAACTCCATGATCTCT+TGG | 0.467798 | 4.2:+584515 | None:intergenic |
| CGAAACATCAAGCCTACAAC+AGG | 0.469821 | 4.2:-584425 | MS.gene62619:CDS |
| GGGATGGAAGTGTGATATAT+GGG | 0.472264 | 4.2:-585172 | MS.gene62619:CDS |
| GAGGCCACCAGTGCAGGGTG+AGG | 0.479639 | 4.2:+586112 | None:intergenic |
| TACAATCTGTTGCATGTTGG+AGG | 0.481984 | 4.2:-586379 | MS.gene62619:CDS |
| CCCGAGCTTAGTGGATTAGT+TGG | 0.482142 | 4.2:-584548 | MS.gene62619:CDS |
| ATAAGCTTCCAGTGTTGTTG+GGG | 0.485280 | 4.2:-586441 | MS.gene62619:CDS |
| AGAAGGGAATGAGCAGAGTA+AGG | 0.488277 | 4.2:-585142 | MS.gene62619:CDS |
| TTTCGAAGGACAAGCTCCTC+AGG | 0.489212 | 4.2:+584443 | None:intergenic |
| ACCAACTAATCCACTAAGCT+CGG | 0.494691 | 4.2:+584547 | None:intergenic |
| GTTTATAGAGATAGAGAAAG+GGG | 0.495286 | 4.2:-583929 | MS.gene62619:CDS |
| AAACTGAAGATCTCAGAAGA+TGG | 0.498138 | 4.2:-585104 | MS.gene62619:CDS |
| GTAGCCATGTCAACTGGATC+AGG | 0.498191 | 4.2:+584049 | None:intergenic |
| GTGCCAATGACAGAAATGAT+AGG | 0.502812 | 4.2:-584220 | MS.gene62619:CDS |
| AGAAAAGTATGGTATCAAAG+AGG | 0.504773 | 4.2:+586625 | None:intergenic |
| TGATGATGATGTTGAGAAGC+TGG | 0.506358 | 4.2:-583798 | MS.gene62619:CDS |
| CTTTGATCTTCTTCTCAGCA+TGG | 0.506564 | 4.2:+583759 | None:intergenic |
| ATGAGGTTCCTTAGCCATGT+TGG | 0.507797 | 4.2:+584100 | None:intergenic |
| GATGTTCGAAATTCATGGGC+TGG | 0.508622 | 4.2:-585041 | MS.gene62619:CDS |
| AGACCCTCACCCTGCACTGG+TGG | 0.509737 | 4.2:-586116 | MS.gene62619:CDS |
| CTTTGAAGGATGTGATTGAC+AGG | 0.509857 | 4.2:-583505 | MS.gene62619:CDS |
| GAGAAGCTGGACTTGATAGT+TGG | 0.512234 | 4.2:-583785 | MS.gene62619:CDS |
| CAGCCGCTTGAGTAACCATC+AGG | 0.514618 | 4.2:+585628 | None:intergenic |
| ATAGAGAAAGGGGAGTTGCA+AGG | 0.518453 | 4.2:-583919 | MS.gene62619:CDS |
| GACTTACCAGTTGATCCTCA+TGG | 0.521146 | 4.2:+584719 | None:intergenic |
| GTTAGACCCTCACCCTGCAC+TGG | 0.526913 | 4.2:-586119 | MS.gene62619:CDS |
| TTTCGAACATCACCGGATAC+GGG | 0.528141 | 4.2:+585053 | None:intergenic |
| GGAACTTTCCAACATGGCTA+AGG | 0.528495 | 4.2:-584108 | MS.gene62619:CDS |
| TTGGAGACCAGGGTGAATGA+AGG | 0.531161 | 4.2:+586668 | None:intergenic |
| CGTTACAATCTGTTGCATGT+TGG | 0.531167 | 4.2:-586382 | MS.gene62619:CDS |
| GAGAAAGGTATTCCCGTATC+CGG | 0.532581 | 4.2:-585065 | MS.gene62619:CDS |
| ACCCCATAATTTAAAGTCGT+CGG | 0.532783 | 4.2:+586235 | None:intergenic |
| TAATAAACAAAGCCTGCAGA+AGG | 0.533377 | 4.2:+585012 | None:intergenic |
| TAATGATCCCAATTAGTAAG+TGG | 0.534721 | 4.2:-583871 | MS.gene62619:CDS |
| AACTGAAGATCTCAGAAGAT+GGG | 0.535040 | 4.2:-585103 | MS.gene62619:CDS |
| CTTCTTGAGCATGATGAGAA+AGG | 0.538966 | 4.2:-585080 | MS.gene62619:CDS |
| AAACAAAACAGAGTCTTTGA+AGG | 0.539259 | 4.2:-583519 | MS.gene62619:CDS |
| GCTTCGAGGCCACCAGTGCA+GGG | 0.541610 | 4.2:+586107 | None:intergenic |
| CTTTATGGAACTTTCCAACA+TGG | 0.544514 | 4.2:-584114 | MS.gene62619:CDS |
| TCTACACCCTTCATTCACCC+TGG | 0.544687 | 4.2:-586675 | MS.gene62619:CDS |
| ATGCTGAGAAGAAGATCAAA+GGG | 0.545504 | 4.2:-583757 | MS.gene62619:CDS |
| AGGCCACCAGTGCAGGGTGA+GGG | 0.545996 | 4.2:+586113 | None:intergenic |
| CTCAAGTGCATTCTCTGTGT+GGG | 0.546472 | 4.2:-583447 | MS.gene62619:CDS |
| CGGTGATGTTCGAAATTCAT+GGG | 0.553151 | 4.2:-585045 | MS.gene62619:CDS |
| GTCAGGGAACTATCATCGGC+CGG | 0.553695 | 4.2:-586267 | MS.gene62619:CDS |
| TTGTAGGCTTGATGTTTCGA+AGG | 0.557809 | 4.2:+584429 | None:intergenic |
| AGAAAGAGCTTCATAGACAC+AGG | 0.560247 | 4.2:-586076 | MS.gene62619:CDS |
| CATGCTGAGAAGAAGATCAA+AGG | 0.562475 | 4.2:-583758 | MS.gene62619:CDS |
| GGGGCTTATCTCAAATATAG+AGG | 0.563891 | 4.2:+583395 | None:intergenic |
| ATATATGGGAACAATGAGAA+GGG | 0.571299 | 4.2:-585158 | MS.gene62619:CDS |
| GATATATGGGAACAATGAGA+AGG | 0.571690 | 4.2:-585159 | MS.gene62619:CDS |
| CCATGAATTTCGAACATCAC+CGG | 0.573382 | 4.2:+585046 | None:intergenic |
| TGGAGACCAGGGTGAATGAA+GGG | 0.574228 | 4.2:+586669 | None:intergenic |
| ACCACATGGTTGGTGGCCCA+TGG | 0.575046 | 4.2:+584144 | None:intergenic |
| GAAAAGTATGGTATCAAAGA+GGG | 0.584808 | 4.2:+586626 | None:intergenic |
| TAACAGCACCACATGGTTGG+TGG | 0.592861 | 4.2:+584137 | None:intergenic |
| TATGCATATCGTACTCCGGC+AGG | 0.593657 | 4.2:-586325 | MS.gene62619:CDS |
| AATGATCCCAATTAGTAAGT+GGG | 0.596335 | 4.2:-583870 | MS.gene62619:CDS |
| AAAACATTAGGACTCCTTGG+TGG | 0.596480 | 4.2:-585531 | MS.gene62619:intron |
| GGTAGTCAGGGAACTATCAT+CGG | 0.596947 | 4.2:-586271 | MS.gene62619:CDS |
| GCTCAAGTGCATTCTCTGTG+TGG | 0.597626 | 4.2:-583448 | MS.gene62619:CDS |
| CACCCCGACGATCACTTGAT+CGG | 0.601063 | 4.2:-586292 | MS.gene62619:CDS |
| GAGCAAATGTTAGTATCCAT+GGG | 0.602349 | 4.2:-584160 | MS.gene62619:CDS |
| CCAACTAATCCACTAAGCTC+GGG | 0.606288 | 4.2:+584548 | None:intergenic |
| CCACAAGAGGTTGGAGACCA+GGG | 0.607968 | 4.2:+586658 | None:intergenic |
| AGAGTAAGGACATTCAAAGA+GGG | 0.611673 | 4.2:-585128 | MS.gene62619:CDS |
| AAGGGTGTAGAGAAAAGAGA+AGG | 0.612180 | 4.2:+586687 | None:intergenic |
| CATCAATATCATGTGCAATG+AGG | 0.613592 | 4.2:+584083 | None:intergenic |
| AGATTTAACAGATGATCAAG+AGG | 0.616215 | 4.2:-583846 | MS.gene62619:CDS |
| GTGGAAATCAGTGCTCCTGA+TGG | 0.623708 | 4.2:-585643 | MS.gene62619:CDS |
| TCCGACGACTTTAAATTATG+GGG | 0.625649 | 4.2:-586236 | MS.gene62619:intron |
| TTGTGGACAAAATTGTGTTG+TGG | 0.626372 | 4.2:-586465 | MS.gene62619:CDS |
| CAGAGTAAGGACATTCAAAG+AGG | 0.629292 | 4.2:-585129 | MS.gene62619:CDS |
| CAGAAATGATAGGAAAACAA+GGG | 0.629712 | 4.2:-584210 | MS.gene62619:CDS |
| GATCACTTGATCGGTAGTCA+GGG | 0.631545 | 4.2:-586283 | MS.gene62619:CDS |
| ACAGAAATGATAGGAAAACA+AGG | 0.633600 | 4.2:-584211 | MS.gene62619:CDS |
| AATAAACAAAGCCTGCAGAA+GGG | 0.635093 | 4.2:+585013 | None:intergenic |
| GTTGACATGGCTACTATGGA+AGG | 0.637307 | 4.2:-584040 | MS.gene62619:intron |
| GCTCCTGATGGTTACTCAAG+CGG | 0.639000 | 4.2:-585631 | MS.gene62619:CDS |
| TTGCATGTTGGAGGAGTGAG+TGG | 0.640130 | 4.2:-586370 | MS.gene62619:CDS |
| CGATCAAGTGATCGTCGGGG+TGG | 0.644828 | 4.2:+586293 | None:intergenic |
| AAGACCTGATCCAGTTGACA+TGG | 0.645059 | 4.2:-584053 | MS.gene62619:CDS |
| ACTACCGATCAAGTGATCGT+CGG | 0.652642 | 4.2:+586288 | None:intergenic |
| AAGTAACAGCACCACATGGT+TGG | 0.654011 | 4.2:+584134 | None:intergenic |
| TCCAAAACATACACAAACGA+AGG | 0.658132 | 4.2:-583554 | MS.gene62619:CDS |
| GAAGCCAAACTTCATGTGTG+AGG | 0.660670 | 4.2:+585555 | None:intergenic |
| GGTTATTGAAGCTCTCAAAG+AGG | 0.662069 | 4.2:-583825 | MS.gene62619:CDS |
| AGAAATGATAGGAAAACAAG+GGG | 0.662137 | 4.2:-584209 | MS.gene62619:CDS |
| ACACTATGCATATCGTACTC+CGG | 0.664405 | 4.2:-586329 | MS.gene62619:CDS |
| TAAGCTTCCAGTGTTGTTGG+GGG | 0.664838 | 4.2:-586440 | MS.gene62619:CDS |
| CATAAAGTAACAGCACCACA+TGG | 0.666274 | 4.2:+584130 | None:intergenic |
| CCATAATTTAAAGTCGTCGG+AGG | 0.668887 | 4.2:+586238 | None:intergenic |
| GATGCATGCACTCTTGCCTG+AGG | 0.680891 | 4.2:-584459 | MS.gene62619:CDS |
| AATTAAACTACTTACCACCA+AGG | 0.695218 | 4.2:+585517 | None:intergenic |
| TCCATGGGCCACCAACCATG+TGG | 0.700524 | 4.2:-584145 | MS.gene62619:CDS |
| GAAAGAGCTTCATAGACACA+GGG | 0.708446 | 4.2:-586075 | MS.gene62619:CDS |
| TACCGATCAAGTGATCGTCG+GGG | 0.754460 | 4.2:+586290 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAGATAAAAGAATTAAA+TGG | + | chr4.2:583891-583910 | None:intergenic | 10.0% |
| !!! | CAAATAAAATTTGATTATTT+TGG | - | chr4.2:586435-586454 | MS.gene62619:CDS | 10.0% |
| !! | ATAAAAAATTCTTAACTCTT+GGG | + | chr4.2:585759-585778 | None:intergenic | 15.0% |
| !! | TGATAATATTGAATTTATGT+AGG | - | chr4.2:583596-583615 | MS.gene62619:CDS | 15.0% |
| !!! | AATTCACATAATTGTTTTTA+AGG | - | chr4.2:584295-584314 | MS.gene62619:intron | 15.0% |
| !!! | ATAATTGCATATGTTATTTA+GGG | - | chr4.2:585851-585870 | MS.gene62619:intron | 15.0% |
| !!! | TATAATTGCATATGTTATTT+AGG | - | chr4.2:585850-585869 | MS.gene62619:intron | 15.0% |
| !! | AAAAATTTGAAAGTCTTTAG+AGG | + | chr4.2:584492-584511 | None:intergenic | 20.0% |
| !! | AAGAAATTCAAAGATTCATT+TGG | - | chr4.2:585509-585528 | MS.gene62619:intron | 20.0% |
| !! | CATAAAAAATTCTTAACTCT+TGG | + | chr4.2:585760-585779 | None:intergenic | 20.0% |
| !!! | AAAATTTGATTATTTTGGCT+TGG | - | chr4.2:586440-586459 | MS.gene62619:CDS | 20.0% |
| !!! | AGATTCATTTGGAAATATTT+TGG | - | chr4.2:585520-585539 | MS.gene62619:intron | 20.0% |
| !!! | GATTCATTTGGAAATATTTT+GGG | - | chr4.2:585521-585540 | MS.gene62619:intron | 20.0% |
| !!! | GTAAAACTTTCATTTTCTTT+TGG | - | chr4.2:585467-585486 | MS.gene62619:intron | 20.0% |
| !!! | TAGAGTTTACTATTGTTTTT+TGG | - | chr4.2:584884-584903 | MS.gene62619:intron | 20.0% |
| !!! | TTTTGGTATGTGAATTATTA+GGG | - | chr4.2:584901-584920 | MS.gene62619:intron | 20.0% |
| !!! | TTTTTGGTATGTGAATTATT+AGG | - | chr4.2:584900-584919 | MS.gene62619:intron | 20.0% |
| ! | AACACTAACATAGAAAAGTA+TGG | + | chr4.2:583482-583501 | None:intergenic | 25.0% |
| ! | AACACTTGTGAAGATATTTA+AGG | - | chr4.2:584664-584683 | MS.gene62619:intron | 25.0% |
| ! | AAGACTAAGAAATTTCAAAC+TGG | - | chr4.2:584513-584532 | MS.gene62619:CDS | 25.0% |
| ! | AGTTTATAGAGATAGAGAAA+GGG | - | chr4.2:586163-586182 | MS.gene62619:intron | 25.0% |
| ! | CAAAAATCCATACAATTGAT+TGG | - | chr4.2:585314-585333 | MS.gene62619:intron | 25.0% |
| ! | CTTAGATCCAAATTACATTA+AGG | + | chr4.2:584397-584416 | None:intergenic | 25.0% |
| ! | GAAAAAAGGCTTTCAAAAAT+AGG | - | chr4.2:585906-585925 | MS.gene62619:intron | 25.0% |
| ! | GATAAAAGAATTAAATGGCT+TGG | + | chr4.2:583886-583905 | None:intergenic | 25.0% |
| ! | GTTGAACCATCAAATTTAAA+AGG | + | chr4.2:584799-584818 | None:intergenic | 25.0% |
| ! | TAGTTTATAGAGATAGAGAA+AGG | - | chr4.2:586162-586181 | MS.gene62619:intron | 25.0% |
| ! | TCCAAAACCTTAATGTAATT+TGG | - | chr4.2:584387-584406 | MS.gene62619:intron | 25.0% |
| ! | TCTATGTTAAACGAGAATAT+AGG | - | chr4.2:584157-584176 | MS.gene62619:CDS | 25.0% |
| ! | TGTCAGTGTAAAAACTAAAA+AGG | + | chr4.2:584745-584764 | None:intergenic | 25.0% |
| ! | TTTCTTTATCTTTGTGATCA+TGG | - | chr4.2:586379-586398 | MS.gene62619:CDS | 25.0% |
| !! | CTTAAAAACTGATACTCTTT+TGG | - | chr4.2:585348-585367 | MS.gene62619:intron | 25.0% |
| !! | TAACCACCTTTTAAATTTGA+TGG | - | chr4.2:584790-584809 | MS.gene62619:CDS | 25.0% |
| !! | TATAGAGGTATGTATTTCTT+AGG | + | chr4.2:586686-586705 | None:intergenic | 25.0% |
| !! | TCCAAATTACATTAAGGTTT+TGG | + | chr4.2:584391-584410 | None:intergenic | 25.0% |
| !!! | AGATAAGAGTATACTTTTCA+AGG | + | chr4.2:585715-585734 | None:intergenic | 25.0% |
| !!! | GAAAACATTTTTTCATAGTG+TGG | - | chr4.2:585804-585823 | MS.gene62619:intron | 25.0% |
| !!! | TATACTTTTCAAGGATTGAA+GGG | + | chr4.2:585706-585725 | None:intergenic | 25.0% |
| !!! | TGCATATGGATATATTTTGA+AGG | - | chr4.2:585397-585416 | MS.gene62619:intron | 25.0% |
| !!! | TTTTTTTGTTCTTTGCTTAC+AGG | - | chr4.2:585222-585241 | MS.gene62619:intron | 25.0% |
| AAACAAAACAGAGTCTTTGA+AGG | - | chr4.2:586574-586593 | MS.gene62619:intron | 30.0% | |
| AAATCTTCCCACTTACTAAT+TGG | + | chr4.2:586233-586252 | None:intergenic | 30.0% | |
| AAGGCTTTCAAAAATAGGAA+TGG | - | chr4.2:585911-585930 | MS.gene62619:intron | 30.0% | |
| AATCTTCCCACTTACTAATT+GGG | + | chr4.2:586232-586251 | None:intergenic | 30.0% | |
| AATGATCCCAATTAGTAAGT+GGG | - | chr4.2:586223-586242 | MS.gene62619:intron | 30.0% | |
| AATTAAACTACTTACCACCA+AGG | + | chr4.2:584579-584598 | None:intergenic | 30.0% | |
| ACAGAAATGATAGGAAAACA+AGG | - | chr4.2:585882-585901 | MS.gene62619:intron | 30.0% | |
| AGAAATGATAGGAAAACAAG+GGG | - | chr4.2:585884-585903 | MS.gene62619:intron | 30.0% | |
| AGATTTAACAGATGATCAAG+AGG | - | chr4.2:586247-586266 | MS.gene62619:CDS | 30.0% | |
| AGCTATGTATGTTTAGATTC+GGG | + | chr4.2:584271-584290 | None:intergenic | 30.0% | |
| ATATATGGGAACAATGAGAA+GGG | - | chr4.2:584935-584954 | MS.gene62619:intron | 30.0% | |
| CAGAAATGATAGGAAAACAA+GGG | - | chr4.2:585883-585902 | MS.gene62619:intron | 30.0% | |
| CAGCTATGTATGTTTAGATT+CGG | + | chr4.2:584272-584291 | None:intergenic | 30.0% | |
| CATTATGCAAGAAATGCAAT+TGG | + | chr4.2:584420-584439 | None:intergenic | 30.0% | |
| GAACCATCAAATTTAAAAGG+TGG | + | chr4.2:584796-584815 | None:intergenic | 30.0% | |
| GGTATGTATTTCTTAGGATT+TGG | + | chr4.2:586680-586699 | None:intergenic | 30.0% | |
| GTTTATAGAGATAGAGAAAG+GGG | - | chr4.2:586164-586183 | MS.gene62619:intron | 30.0% | |
| TAAGGAACTGATGTAACAAA+GGG | - | chr4.2:584313-584332 | MS.gene62619:intron | 30.0% | |
| TAATGATCCCAATTAGTAAG+TGG | - | chr4.2:586222-586241 | MS.gene62619:intron | 30.0% | |
| TACAGTTCATGATTCATGAT+TGG | - | chr4.2:584072-584091 | MS.gene62619:CDS | 30.0% | |
| TATCTTCACAAGTGTTTACA+TGG | + | chr4.2:584660-584679 | None:intergenic | 30.0% | |
| TGATTGGATTGATCATTTAG+AGG | - | chr4.2:584088-584107 | MS.gene62619:CDS | 30.0% | |
| TGCATTTCTTGCATAATGTT+TGG | - | chr4.2:584422-584441 | MS.gene62619:CDS | 30.0% | |
| TTAAGGAACTGATGTAACAA+AGG | - | chr4.2:584312-584331 | MS.gene62619:intron | 30.0% | |
| TTTCCTATCATTTCTGTCAT+TGG | + | chr4.2:585879-585898 | None:intergenic | 30.0% | |
| ! | AACTTTCATTTTCTTTTGGC+AGG | - | chr4.2:585471-585490 | MS.gene62619:intron | 30.0% |
| ! | AGAAAAGTATGGTATCAAAG+AGG | + | chr4.2:583471-583490 | None:intergenic | 30.0% |
| ! | GAAAAGTATGGTATCAAAGA+GGG | + | chr4.2:583470-583489 | None:intergenic | 30.0% |
| ! | TATGTAGGTGATACATTTTG+TGG | - | chr4.2:583611-583630 | MS.gene62619:intron | 30.0% |
| ! | TCTTGCATAATGTTTGGAAT+AGG | - | chr4.2:584428-584447 | MS.gene62619:CDS | 30.0% |
| ! | TTTTCATCTGCTGTATAACT+TGG | - | chr4.2:585149-585168 | MS.gene62619:CDS | 30.0% |
| !! | GTATACTTTTCAAGGATTGA+AGG | + | chr4.2:585707-585726 | None:intergenic | 30.0% |
| !!! | ACATTAAGGTTTTGGAGAAT+TGG | + | chr4.2:584383-584402 | None:intergenic | 30.0% |
| !!! | TATTTTGGCTTGGAATCTTA+TGG | - | chr4.2:586450-586469 | MS.gene62619:CDS | 30.0% |
| AAAACGTGCATTAATTTCCG+AGG | + | chr4.2:585206-585225 | None:intergenic | 35.0% | |
| AAACTGAAGATCTCAGAAGA+TGG | - | chr4.2:584989-585008 | MS.gene62619:CDS | 35.0% | |
| AACTCTTCAGTAAGCGAATA+GGG | + | chr4.2:585599-585618 | None:intergenic | 35.0% | |
| AACTGAAGATCTCAGAAGAT+GGG | - | chr4.2:584990-585009 | MS.gene62619:CDS | 35.0% | |
| AAGAGTTCACGAGTGTTTAT+AGG | - | chr4.2:585612-585631 | MS.gene62619:CDS | 35.0% | |
| AATAAACAAAGCCTGCAGAA+GGG | + | chr4.2:585083-585102 | None:intergenic | 35.0% | |
| ACTCTATAGGTATGCAAGAT+TGG | - | chr4.2:585273-585292 | MS.gene62619:intron | 35.0% | |
| AGAGTAAGGACATTCAAAGA+GGG | - | chr4.2:584965-584984 | MS.gene62619:intron | 35.0% | |
| AGTTCAGCAAACAGGATTAT+TGG | - | chr4.2:584846-584865 | MS.gene62619:CDS | 35.0% | |
| AGTTGCTCATCATCAAAATC+AGG | + | chr4.2:585256-585275 | None:intergenic | 35.0% | |
| ATGCTGAGAAGAAGATCAAA+GGG | - | chr4.2:586336-586355 | MS.gene62619:CDS | 35.0% | |
| CATCAATATCATGTGCAATG+AGG | + | chr4.2:586013-586032 | None:intergenic | 35.0% | |
| CTACAGTCCAATCAATTGTA+TGG | + | chr4.2:585324-585343 | None:intergenic | 35.0% | |
| CTCATTGCACATGATATTGA+TGG | - | chr4.2:586011-586030 | MS.gene62619:CDS | 35.0% | |
| CTCCGACGACTTTAAATTAT+GGG | - | chr4.2:583856-583875 | MS.gene62619:CDS | 35.0% | |
| CTTTATGGAACTTTCCAACA+TGG | - | chr4.2:585979-585998 | MS.gene62619:intron | 35.0% | |
| GAGCAAATGTTAGTATCCAT+GGG | - | chr4.2:585933-585952 | MS.gene62619:intron | 35.0% | |
| GATATATGGGAACAATGAGA+AGG | - | chr4.2:584934-584953 | MS.gene62619:intron | 35.0% | |
| GGTATGTGAATTATTAGGGA+TGG | - | chr4.2:584905-584924 | MS.gene62619:intron | 35.0% | |
| TAATAAACAAAGCCTGCAGA+AGG | + | chr4.2:585084-585103 | None:intergenic | 35.0% | |
| TAGGAAAACAAGGGGAAAAA+AGG | - | chr4.2:585892-585911 | MS.gene62619:intron | 35.0% | |
| TCCAAAACATACACAAACGA+AGG | - | chr4.2:586539-586558 | MS.gene62619:intron | 35.0% | |
| TCCGACGACTTTAAATTATG+GGG | - | chr4.2:583857-583876 | MS.gene62619:CDS | 35.0% | |
| TTGTGGACAAAATTGTGTTG+TGG | - | chr4.2:583628-583647 | MS.gene62619:intron | 35.0% | |
| ! | ACCCCATAATTTAAAGTCGT+CGG | + | chr4.2:583861-583880 | None:intergenic | 35.0% |
| ! | ACCTTCGTTTGTGTATGTTT+TGG | + | chr4.2:586543-586562 | None:intergenic | 35.0% |
| ! | AGTTTGGCTTCCAAAACATT+AGG | - | chr4.2:584550-584569 | MS.gene62619:CDS | 35.0% |
| ! | ATCCAATTTTCAGTCATCTC+AGG | + | chr4.2:586620-586639 | None:intergenic | 35.0% |
| ! | GAAGATTTAGTTCAGCAAAC+AGG | - | chr4.2:584838-584857 | MS.gene62619:CDS | 35.0% |
| ! | TACAAAAGCATGCTTGCAAA+AGG | + | chr4.2:586094-586113 | None:intergenic | 35.0% |
| ! | TCATTTTCTTTTGGCAGGTA+TGG | - | chr4.2:585476-585495 | MS.gene62619:intron | 35.0% |
| ! | TCCAATTTTCAGTCATCTCA+GGG | + | chr4.2:586619-586638 | None:intergenic | 35.0% |
| ! | TGCATAATGTTTGGAATAGG+TGG | - | chr4.2:584431-584450 | MS.gene62619:CDS | 35.0% |
| ! | TGGAATCTTATGGTTTTCTG+TGG | - | chr4.2:586460-586479 | MS.gene62619:CDS | 35.0% |
| ! | TTTGGCAGGTATGGATTTTT+GGG | - | chr4.2:585485-585504 | MS.gene62619:intron | 35.0% |
| ! | TTTTGGCAGGTATGGATTTT+TGG | - | chr4.2:585484-585503 | MS.gene62619:intron | 35.0% |
| !! | GGATATATTTTGAAGGAGAC+AGG | - | chr4.2:585404-585423 | MS.gene62619:intron | 35.0% |
| !! | TAGTGGATTAGTTGGTCTTA+AGG | - | chr4.2:585553-585572 | MS.gene62619:CDS | 35.0% |
| !! | TCAACATGATAGCTTGTTCA+TGG | - | chr4.2:584048-584067 | MS.gene62619:CDS | 35.0% |
| !! | TTGATGATGAGCAACTCTAT+AGG | - | chr4.2:585260-585279 | MS.gene62619:intron | 35.0% |
| !!! | ACACAAACGAAGGTTTTGAA+TGG | - | chr4.2:586549-586568 | MS.gene62619:intron | 35.0% |
| !!! | CACAAACGAAGGTTTTGAAT+GGG | - | chr4.2:586550-586569 | MS.gene62619:intron | 35.0% |
| !!! | TAAGGTTTTGGAGAATTGGT+TGG | + | chr4.2:584379-584398 | None:intergenic | 35.0% |
| AAAACATTAGGACTCCTTGG+TGG | - | chr4.2:584562-584581 | MS.gene62619:CDS | 40.0% | |
| ACACTATGCATATCGTACTC+CGG | - | chr4.2:583764-583783 | MS.gene62619:CDS | 40.0% | |
| ACCAACTAATCCACTAAGCT+CGG | + | chr4.2:585549-585568 | None:intergenic | 40.0% | |
| AGAAAGAGCTTCATAGACAC+AGG | - | chr4.2:584017-584036 | MS.gene62619:intron | 40.0% | |
| ATTTCGAACATCACCGGATA+CGG | + | chr4.2:585044-585063 | None:intergenic | 40.0% | |
| CAGAGTAAGGACATTCAAAG+AGG | - | chr4.2:584964-584983 | MS.gene62619:intron | 40.0% | |
| CATAAAGTAACAGCACCACA+TGG | + | chr4.2:585966-585985 | None:intergenic | 40.0% | |
| CATGCTGAGAAGAAGATCAA+AGG | - | chr4.2:586335-586354 | MS.gene62619:CDS | 40.0% | |
| CATTTGTCTTCTCCTGTTGT+AGG | + | chr4.2:585683-585702 | None:intergenic | 40.0% | |
| CCATGAATTTCGAACATCAC+CGG | + | chr4.2:585050-585069 | None:intergenic | 40.0% | |
| CCTCCGACGACTTTAAATTA+TGG | - | chr4.2:583855-583874 | MS.gene62619:CDS | 40.0% | |
| CGGTGATGTTCGAAATTCAT+GGG | - | chr4.2:585048-585067 | MS.gene62619:CDS | 40.0% | |
| CGTTACAATCTGTTGCATGT+TGG | - | chr4.2:583711-583730 | MS.gene62619:CDS | 40.0% | |
| CTGTGGTGACTATGATGTTT+AGG | - | chr4.2:586477-586496 | MS.gene62619:CDS | 40.0% | |
| CTTCTTGAGCATGATGAGAA+AGG | - | chr4.2:585013-585032 | MS.gene62619:CDS | 40.0% | |
| CTTTGATCTTCTTCTCAGCA+TGG | + | chr4.2:586337-586356 | None:intergenic | 40.0% | |
| GAAAGAGCTTCATAGACACA+GGG | - | chr4.2:584018-584037 | MS.gene62619:intron | 40.0% | |
| GAACTCTTCAGTAAGCGAAT+AGG | + | chr4.2:585600-585619 | None:intergenic | 40.0% | |
| GGAGCAAATGTTAGTATCCA+TGG | - | chr4.2:585932-585951 | MS.gene62619:intron | 40.0% | |
| GGGCAATATACTTGGGAATT+AGG | - | chr4.2:583673-583692 | MS.gene62619:intron | 40.0% | |
| GGTTATTGAAGCTCTCAAAG+AGG | - | chr4.2:586268-586287 | MS.gene62619:CDS | 40.0% | |
| GTGCCAATGACAGAAATGAT+AGG | - | chr4.2:585873-585892 | MS.gene62619:intron | 40.0% | |
| TACAATCTGTTGCATGTTGG+AGG | - | chr4.2:583714-583733 | MS.gene62619:CDS | 40.0% | |
| TCAACTGGTAAGTCTGCATA+TGG | - | chr4.2:585383-585402 | MS.gene62619:intron | 40.0% | |
| TCATTTAGAGGACACTGAAC+AGG | - | chr4.2:584100-584119 | MS.gene62619:CDS | 40.0% | |
| TCCAAAACATTAGGACTCCT+TGG | - | chr4.2:584559-584578 | MS.gene62619:CDS | 40.0% | |
| TCCCTGAGATGACTGAAAAT+TGG | - | chr4.2:586615-586634 | MS.gene62619:intron | 40.0% | |
| TCTTTGTGATCATGGCTTCA+AGG | - | chr4.2:586387-586406 | MS.gene62619:CDS | 40.0% | |
| TGGTGACTATGATGTTTAGG+AGG | - | chr4.2:586480-586499 | MS.gene62619:intron | 40.0% | |
| TTGTAGGCTTGATGTTTCGA+AGG | + | chr4.2:585667-585686 | None:intergenic | 40.0% | |
| TTGTTGGGGGCAATATACTT+GGG | - | chr4.2:583666-583685 | MS.gene62619:intron | 40.0% | |
| ! | AAGGGTGTAGAGAAAAGAGA+AGG | + | chr4.2:583409-583428 | None:intergenic | 40.0% |
| ! | ACCAAGGAGTCCTAATGTTT+TGG | + | chr4.2:584563-584582 | None:intergenic | 40.0% |
| ! | AGGGATGGAAGTGTGATATA+TGG | - | chr4.2:584920-584939 | MS.gene62619:intron | 40.0% |
| ! | ATAAGCTTCCAGTGTTGTTG+GGG | - | chr4.2:583652-583671 | MS.gene62619:intron | 40.0% |
| ! | ATACTCTTTTGGCATCCATG+AGG | - | chr4.2:585359-585378 | MS.gene62619:intron | 40.0% |
| ! | CATAAGCTTCCAGTGTTGTT+GGG | - | chr4.2:583651-583670 | MS.gene62619:intron | 40.0% |
| ! | CCATAATTTAAAGTCGTCGG+AGG | + | chr4.2:583858-583877 | None:intergenic | 40.0% |
| ! | CTTTGAAGGATGTGATTGAC+AGG | - | chr4.2:586588-586607 | MS.gene62619:intron | 40.0% |
| ! | GGGATGGAAGTGTGATATAT+GGG | - | chr4.2:584921-584940 | MS.gene62619:intron | 40.0% |
| ! | GGTATCAAAGAGGGTCATTT+TGG | + | chr4.2:583461-583480 | None:intergenic | 40.0% |
| ! | TGATGATGATGTTGAGAAGC+TGG | - | chr4.2:586295-586314 | MS.gene62619:CDS | 40.0% |
| ! | TTGGCAGGTATGGATTTTTG+GGG | - | chr4.2:585486-585505 | MS.gene62619:intron | 40.0% |
| !! | CATGTGGTGCTGTTACTTTA+TGG | - | chr4.2:585964-585983 | MS.gene62619:intron | 40.0% |
| !!! | ACTGCACTCATTTTTTGCCT+CGG | - | chr4.2:585186-585205 | MS.gene62619:intron | 40.0% |
| AAGACCTGATCCAGTTGACA+TGG | - | chr4.2:586040-586059 | MS.gene62619:CDS | 45.0% | |
| AAGTAACAGCACCACATGGT+TGG | + | chr4.2:585962-585981 | None:intergenic | 45.0% | |
| ACTACCGATCAAGTGATCGT+CGG | + | chr4.2:583808-583827 | None:intergenic | 45.0% | |
| AGAAGGGAATGAGCAGAGTA+AGG | - | chr4.2:584951-584970 | MS.gene62619:intron | 45.0% | |
| ATAGAGAAAGGGGAGTTGCA+AGG | - | chr4.2:586174-586193 | MS.gene62619:intron | 45.0% | |
| ATGAGGTTCCTTAGCCATGT+TGG | + | chr4.2:585996-586015 | None:intergenic | 45.0% | |
| ATGAGTGCAGTGGCAGAAAA+TGG | + | chr4.2:585177-585196 | None:intergenic | 45.0% | |
| CCAACTAATCCACTAAGCTC+GGG | + | chr4.2:585548-585567 | None:intergenic | 45.0% | |
| CCGGTGATGTTCGAAATTCA+TGG | - | chr4.2:585047-585066 | MS.gene62619:CDS | 45.0% | |
| CGAAACATCAAGCCTACAAC+AGG | - | chr4.2:585668-585687 | MS.gene62619:intron | 45.0% | |
| CTCAAGTGCATTCTCTGTGT+GGG | - | chr4.2:586646-586665 | MS.gene62619:CDS | 45.0% | |
| CTTAAGGAGCCAAGAGATCA+TGG | - | chr4.2:585569-585588 | MS.gene62619:CDS | 45.0% | |
| CTTTCTTGCTAGAAGCTTCG+AGG | + | chr4.2:584003-584022 | None:intergenic | 45.0% | |
| GAAGCCAAACTTCATGTGTG+AGG | + | chr4.2:584541-584560 | None:intergenic | 45.0% | |
| GACTTACCAGTTGATCCTCA+TGG | + | chr4.2:585377-585396 | None:intergenic | 45.0% | |
| GAGGCAAAAAATGAGTGCAG+TGG | + | chr4.2:585187-585206 | None:intergenic | 45.0% | |
| GATCACTTGATCGGTAGTCA+GGG | - | chr4.2:583810-583829 | MS.gene62619:CDS | 45.0% | |
| GATGTAACAAAGGGACACGA+TGG | - | chr4.2:584322-584341 | MS.gene62619:intron | 45.0% | |
| GATGTTCGAAATTCATGGGC+TGG | - | chr4.2:585052-585071 | MS.gene62619:CDS | 45.0% | |
| GCATAAGCTTCCAGTGTTGT+TGG | - | chr4.2:583650-583669 | MS.gene62619:intron | 45.0% | |
| GGAACTTTCCAACATGGCTA+AGG | - | chr4.2:585985-586004 | MS.gene62619:intron | 45.0% | |
| GGTAGTCAGGGAACTATCAT+CGG | - | chr4.2:583822-583841 | MS.gene62619:CDS | 45.0% | |
| GTTGACATGGCTACTATGGA+AGG | - | chr4.2:586053-586072 | MS.gene62619:CDS | 45.0% | |
| GTTGTTGGGGGCAATATACT+TGG | - | chr4.2:583665-583684 | MS.gene62619:intron | 45.0% | |
| TAGGGAACTCCATGATCTCT+TGG | + | chr4.2:585581-585600 | None:intergenic | 45.0% | |
| TATATTGCCCCCAACAACAC+TGG | + | chr4.2:583663-583682 | None:intergenic | 45.0% | |
| TCCAGTTGACATGGCTACTA+TGG | - | chr4.2:586049-586068 | MS.gene62619:CDS | 45.0% | |
| TCCATAGTAGCCATGTCAAC+TGG | + | chr4.2:586053-586072 | None:intergenic | 45.0% | |
| TTTCGAACATCACCGGATAC+GGG | + | chr4.2:585043-585062 | None:intergenic | 45.0% | |
| ! | GAGAAGCTGGACTTGATAGT+TGG | - | chr4.2:586308-586327 | MS.gene62619:CDS | 45.0% |
| ! | TAAGCTTCCAGTGTTGTTGG+GGG | - | chr4.2:583653-583672 | MS.gene62619:intron | 45.0% |
| !! | AGTGTGGTTCTGAATGCGAA+GGG | - | chr4.2:585820-585839 | MS.gene62619:intron | 45.0% |
| !! | GAGAAAGGTATTCCCGTATC+CGG | - | chr4.2:585028-585047 | MS.gene62619:CDS | 45.0% |
| !! | TAGTGTGGTTCTGAATGCGA+AGG | - | chr4.2:585819-585838 | MS.gene62619:intron | 45.0% |
| !! | TCATTTTGGCCACAAGAGGT+TGG | + | chr4.2:583447-583466 | None:intergenic | 45.0% |
| !! | CATATATAATTAATAAATAT+TGG | + | chr4.2:584127-584146 | None:intergenic | 5.0% |
| CGATCACTTGATCGGTAGTC+AGG | - | chr4.2:583809-583828 | MS.gene62619:CDS | 50.0% | |
| CTACCGATCAAGTGATCGTC+GGG | + | chr4.2:583807-583826 | None:intergenic | 50.0% | |
| GCTCAAGTGCATTCTCTGTG+TGG | - | chr4.2:586645-586664 | MS.gene62619:CDS | 50.0% | |
| GCTCCTGATGGTTACTCAAG+CGG | - | chr4.2:584462-584481 | MS.gene62619:CDS | 50.0% | |
| GGCTCCTCACACATGAAGTT+TGG | - | chr4.2:584534-584553 | MS.gene62619:CDS | 50.0% | |
| GTAGCCATGTCAACTGGATC+AGG | + | chr4.2:586047-586066 | None:intergenic | 50.0% | |
| GTGGAAATCAGTGCTCCTGA+TGG | - | chr4.2:584450-584469 | MS.gene62619:CDS | 50.0% | |
| TAACAGCACCACATGGTTGG+TGG | + | chr4.2:585959-585978 | None:intergenic | 50.0% | |
| TACCGATCAAGTGATCGTCG+GGG | + | chr4.2:583806-583825 | None:intergenic | 50.0% | |
| TATGCATATCGTACTCCGGC+AGG | - | chr4.2:583768-583787 | MS.gene62619:CDS | 50.0% | |
| TCTACACCCTTCATTCACCC+TGG | - | chr4.2:583418-583437 | MS.gene62619:CDS | 50.0% | |
| TGGAGACCAGGGTGAATGAA+GGG | + | chr4.2:583427-583446 | None:intergenic | 50.0% | |
| TGGCATCCATGAGGATCAAC+TGG | - | chr4.2:585368-585387 | MS.gene62619:intron | 50.0% | |
| TTGCATGTTGGAGGAGTGAG+TGG | - | chr4.2:583723-583742 | MS.gene62619:CDS | 50.0% | |
| TTGGAGACCAGGGTGAATGA+AGG | + | chr4.2:583428-583447 | None:intergenic | 50.0% | |
| TTTCGAAGGACAAGCTCCTC+AGG | + | chr4.2:585653-585672 | None:intergenic | 50.0% | |
| ! | AAGTCGTCGGAGGCATATTC+CGG | + | chr4.2:583848-583867 | None:intergenic | 50.0% |
| !! | AGGGTCATTTTGGCCACAAG+AGG | + | chr4.2:583451-583470 | None:intergenic | 50.0% |
| !! | CCCGAGCTTAGTGGATTAGT+TGG | - | chr4.2:585545-585564 | MS.gene62619:CDS | 50.0% |
| !!! | ATTTTGGGACCCGAGCTTAG+TGG | - | chr4.2:585536-585555 | MS.gene62619:CDS | 50.0% |
| CACCCCGACGATCACTTGAT+CGG | - | chr4.2:583801-583820 | MS.gene62619:CDS | 55.0% | |
| CAGCCGCTTGAGTAACCATC+AGG | + | chr4.2:584468-584487 | None:intergenic | 55.0% | |
| CCACAAGAGGTTGGAGACCA+GGG | + | chr4.2:583438-583457 | None:intergenic | 55.0% | |
| GATGCATGCACTCTTGCCTG+AGG | - | chr4.2:585634-585653 | MS.gene62619:CDS | 55.0% | |
| GTCAGGGAACTATCATCGGC+CGG | - | chr4.2:583826-583845 | MS.gene62619:CDS | 55.0% | |
| ! | GGCTGGTTATTCCCTTCTGC+AGG | - | chr4.2:585069-585088 | MS.gene62619:CDS | 55.0% |
| CCCTGGTCTCCAACCTCTTG+TGG | - | chr4.2:583435-583454 | MS.gene62619:CDS | 60.0% | |
| CGATCAAGTGATCGTCGGGG+TGG | + | chr4.2:583803-583822 | None:intergenic | 60.0% | |
| GCCACAAGAGGTTGGAGACC+AGG | + | chr4.2:583439-583458 | None:intergenic | 60.0% | |
| GTTAGACCCTCACCCTGCAC+TGG | - | chr4.2:583974-583993 | MS.gene62619:intron | 60.0% | |
| TCCATGGGCCACCAACCATG+TGG | - | chr4.2:585948-585967 | MS.gene62619:intron | 60.0% | |
| !! | ACCACATGGTTGGTGGCCCA+TGG | + | chr4.2:585952-585971 | None:intergenic | 60.0% |
| AGACCCTCACCCTGCACTGG+TGG | - | chr4.2:583977-583996 | MS.gene62619:intron | 65.0% | |
| AGCTTCGAGGCCACCAGTGC+AGG | + | chr4.2:583990-584009 | None:intergenic | 65.0% | |
| AGGCCACCAGTGCAGGGTGA+GGG | + | chr4.2:583983-584002 | None:intergenic | 65.0% | |
| GCTTCGAGGCCACCAGTGCA+GGG | + | chr4.2:583989-584008 | None:intergenic | 65.0% | |
| GAGGCCACCAGTGCAGGGTG+AGG | + | chr4.2:583984-584003 | None:intergenic | 70.0% | |
| GGGTGGTTGCACGTGCCTGC+CGG | + | chr4.2:583786-583805 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 583400 | 586715 | 583400 | ID=MS.gene62619 |
| chr4.2 | mRNA | 583400 | 586715 | 583400 | ID=MS.gene62619.t1;Parent=MS.gene62619 |
| chr4.2 | exon | 586623 | 586715 | 586623 | ID=MS.gene62619.t1.exon1;Parent=MS.gene62619.t1 |
| chr4.2 | CDS | 586623 | 586715 | 586623 | ID=cds.MS.gene62619.t1;Parent=MS.gene62619.t1 |
| chr4.2 | exon | 586237 | 586497 | 586237 | ID=MS.gene62619.t1.exon2;Parent=MS.gene62619.t1 |
| chr4.2 | CDS | 586237 | 586497 | 586237 | ID=cds.MS.gene62619.t1;Parent=MS.gene62619.t1 |
| chr4.2 | exon | 585994 | 586143 | 585994 | ID=MS.gene62619.t1.exon3;Parent=MS.gene62619.t1 |
| chr4.2 | CDS | 585994 | 586143 | 585994 | ID=cds.MS.gene62619.t1;Parent=MS.gene62619.t1 |
| chr4.2 | exon | 585532 | 585665 | 585532 | ID=MS.gene62619.t1.exon4;Parent=MS.gene62619.t1 |
| chr4.2 | CDS | 585532 | 585665 | 585532 | ID=cds.MS.gene62619.t1;Parent=MS.gene62619.t1 |
| chr4.2 | exon | 584980 | 585193 | 584980 | ID=MS.gene62619.t1.exon5;Parent=MS.gene62619.t1 |
| chr4.2 | CDS | 584980 | 585193 | 584980 | ID=cds.MS.gene62619.t1;Parent=MS.gene62619.t1 |
| chr4.2 | exon | 584726 | 584871 | 584726 | ID=MS.gene62619.t1.exon6;Parent=MS.gene62619.t1 |
| chr4.2 | CDS | 584726 | 584871 | 584726 | ID=cds.MS.gene62619.t1;Parent=MS.gene62619.t1 |
| chr4.2 | exon | 584395 | 584622 | 584395 | ID=MS.gene62619.t1.exon7;Parent=MS.gene62619.t1 |
| chr4.2 | CDS | 584395 | 584622 | 584395 | ID=cds.MS.gene62619.t1;Parent=MS.gene62619.t1 |
| chr4.2 | exon | 584041 | 584243 | 584041 | ID=MS.gene62619.t1.exon8;Parent=MS.gene62619.t1 |
| chr4.2 | CDS | 584041 | 584243 | 584041 | ID=cds.MS.gene62619.t1;Parent=MS.gene62619.t1 |
| chr4.2 | exon | 583707 | 583950 | 583707 | ID=MS.gene62619.t1.exon9;Parent=MS.gene62619.t1 |
| chr4.2 | CDS | 583707 | 583950 | 583707 | ID=cds.MS.gene62619.t1;Parent=MS.gene62619.t1 |
| chr4.2 | exon | 583400 | 583616 | 583400 | ID=MS.gene62619.t1.exon10;Parent=MS.gene62619.t1 |
| chr4.2 | CDS | 583400 | 583616 | 583400 | ID=cds.MS.gene62619.t1;Parent=MS.gene62619.t1 |
| Gene Sequence |
| Protein sequence |
