Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93781.t1 | XP_003631072.1 | 97.8 | 629 | 14 | 0 | 1 | 629 | 1 | 629 | 0.00E+00 | 1282.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93781.t1 | Q9C9U3 | 70.3 | 623 | 184 | 1 | 7 | 629 | 7 | 628 | 2.0e-277 | 956.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93781.t1 | G7LD99 | 97.8 | 629 | 14 | 0 | 1 | 629 | 1 | 629 | 0.0e+00 | 1282.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050122 | MS.gene93781 | 0.837122 | 6.26E-57 | -1.69E-46 |
| MS.gene051525 | MS.gene93781 | 0.818433 | 1.97E-52 | -1.69E-46 |
| MS.gene051588 | MS.gene93781 | 0.869243 | 3.58E-66 | -1.69E-46 |
| MS.gene052011 | MS.gene93781 | -0.838786 | 2.34E-57 | -1.69E-46 |
| MS.gene052414 | MS.gene93781 | 0.818625 | 1.78E-52 | -1.69E-46 |
| MS.gene053169 | MS.gene93781 | 0.826024 | 3.40E-54 | -1.69E-46 |
| MS.gene053318 | MS.gene93781 | 0.809143 | 2.19E-50 | -1.69E-46 |
| MS.gene054010 | MS.gene93781 | 0.804173 | 2.45E-49 | -1.69E-46 |
| MS.gene054012 | MS.gene93781 | 0.800536 | 1.38E-48 | -1.69E-46 |
| MS.gene054102 | MS.gene93781 | 0.800533 | 1.38E-48 | -1.69E-46 |
| MS.gene054183 | MS.gene93781 | 0.862371 | 5.31E-64 | -1.69E-46 |
| MS.gene054556 | MS.gene93781 | 0.835288 | 1.83E-56 | -1.69E-46 |
| MS.gene054920 | MS.gene93781 | 0.868035 | 8.81E-66 | -1.69E-46 |
| MS.gene055369 | MS.gene93781 | 0.847155 | 1.38E-59 | -1.69E-46 |
| MS.gene055741 | MS.gene93781 | 0.811248 | 7.70E-51 | -1.69E-46 |
| MS.gene055744 | MS.gene93781 | 0.819002 | 1.46E-52 | -1.69E-46 |
| MS.gene055909 | MS.gene93781 | 0.812209 | 4.76E-51 | -1.69E-46 |
| MS.gene055911 | MS.gene93781 | 0.821395 | 4.13E-53 | -1.69E-46 |
| MS.gene056346 | MS.gene93781 | 0.834649 | 2.65E-56 | -1.69E-46 |
| MS.gene056514 | MS.gene93781 | 0.856376 | 3.35E-62 | -1.69E-46 |
| MS.gene056723 | MS.gene93781 | 0.824786 | 6.68E-54 | -1.69E-46 |
| MS.gene056902 | MS.gene93781 | 0.811883 | 5.60E-51 | -1.69E-46 |
| MS.gene057476 | MS.gene93781 | 0.822227 | 2.65E-53 | -1.69E-46 |
| MS.gene057749 | MS.gene93781 | 0.807007 | 6.24E-50 | -1.69E-46 |
| MS.gene057823 | MS.gene93781 | 0.800928 | 1.14E-48 | -1.69E-46 |
| MS.gene057825 | MS.gene93781 | 0.822732 | 2.02E-53 | -1.69E-46 |
| MS.gene057826 | MS.gene93781 | 0.815689 | 8.13E-52 | -1.69E-46 |
| MS.gene057887 | MS.gene93781 | 0.855035 | 8.26E-62 | -1.69E-46 |
| MS.gene058208 | MS.gene93781 | 0.809711 | 1.65E-50 | -1.69E-46 |
| MS.gene058700 | MS.gene93781 | 0.803776 | 2.97E-49 | -1.69E-46 |
| MS.gene058885 | MS.gene93781 | 0.81056 | 1.08E-50 | -1.69E-46 |
| MS.gene059011 | MS.gene93781 | 0.808239 | 3.42E-50 | -1.69E-46 |
| MS.gene059420 | MS.gene93781 | 0.855438 | 6.31E-62 | -1.69E-46 |
| MS.gene059517 | MS.gene93781 | 0.839572 | 1.46E-57 | -1.69E-46 |
| MS.gene059868 | MS.gene93781 | 0.846626 | 1.93E-59 | -1.69E-46 |
| MS.gene060372 | MS.gene93781 | 0.806121 | 9.59E-50 | -1.69E-46 |
| MS.gene061214 | MS.gene93781 | 0.8024 | 5.71E-49 | -1.69E-46 |
| MS.gene061215 | MS.gene93781 | 0.803 | 4.29E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene93781 | MS.gene20637 | PPI |
| MS.gene54669 | MS.gene93781 | PPI |
| MS.gene57088 | MS.gene93781 | PPI |
| MS.gene54667 | MS.gene93781 | PPI |
| MS.gene57085 | MS.gene93781 | PPI |
| MS.gene93781 | MS.gene20639 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93781.t1 | MTR_8g106800 | 97.774 | 629 | 14 | 0 | 1 | 629 | 1 | 629 | 0.0 | 1288 |
| MS.gene93781.t1 | MTR_6g007767 | 62.440 | 623 | 227 | 2 | 11 | 629 | 21 | 640 | 0.0 | 830 |
| MS.gene93781.t1 | MTR_6g007770 | 65.008 | 603 | 204 | 2 | 31 | 629 | 19 | 618 | 0.0 | 823 |
| MS.gene93781.t1 | MTR_6g007763 | 63.082 | 623 | 226 | 3 | 11 | 629 | 19 | 641 | 0.0 | 811 |
| MS.gene93781.t1 | MTR_6g007767 | 66.270 | 504 | 170 | 0 | 126 | 629 | 2 | 505 | 0.0 | 728 |
| MS.gene93781.t1 | MTR_6g007767 | 62.138 | 552 | 202 | 2 | 11 | 558 | 21 | 569 | 0.0 | 725 |
| MS.gene93781.t1 | MTR_6g007767 | 59.553 | 403 | 156 | 2 | 11 | 409 | 21 | 420 | 3.43e-172 | 497 |
| MS.gene93781.t1 | MTR_6g007767 | 59.406 | 404 | 157 | 2 | 11 | 410 | 21 | 421 | 1.19e-171 | 496 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene93781.t1 | AT1G73680 | 69.952 | 629 | 188 | 1 | 1 | 629 | 1 | 628 | 0.0 | 960 |
| MS.gene93781.t1 | AT1G73680 | 68.182 | 638 | 193 | 2 | 1 | 629 | 1 | 637 | 0.0 | 936 |
| MS.gene93781.t1 | AT1G73680 | 72.308 | 520 | 143 | 1 | 110 | 629 | 1 | 519 | 0.0 | 819 |
| MS.gene93781.t1 | AT3G01420 | 63.183 | 622 | 227 | 2 | 10 | 629 | 15 | 636 | 0.0 | 814 |
| MS.gene93781.t1 | AT1G73680 | 72.000 | 475 | 132 | 1 | 155 | 629 | 1 | 474 | 0.0 | 742 |
Find 153 sgRNAs with CRISPR-Local
Find 235 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGATTCATTTGGAAATATTT+TGG | 0.100271 | 4.1:-655977 | MS.gene93781:CDS |
| AAATCATCCCACTTACTAAT+TGG | 0.154795 | 4.1:+655267 | None:intergenic |
| TATAGAGGTATGTATTTCTT+AGG | 0.222425 | 4.1:+654814 | None:intergenic |
| CCTCCGACGACTTTAAATTA+TGG | 0.229905 | 4.1:-657613 | MS.gene93781:CDS |
| TCCCTGAGATGACTGAAAAT+TGG | 0.233453 | 4.1:-654882 | MS.gene93781:CDS |
| GGGCAATATACTTGGGAATT+AGG | 0.236418 | 4.1:-657795 | MS.gene93781:CDS |
| GGTATCAAAGAGGGTCATTT+TGG | 0.261310 | 4.1:+658010 | None:intergenic |
| CATAAGCTTCCAGTGTTGTT+GGG | 0.270454 | 4.1:-657817 | MS.gene93781:CDS |
| CATTTGTCTTCTCCTGTTGT+AGG | 0.275032 | 4.1:+655817 | None:intergenic |
| AAGAGTTCACGAGTGTTTAT+AGG | 0.276589 | 4.1:-655885 | MS.gene93781:CDS |
| TTTCCTATCATTTCTGTCAT+TGG | 0.278143 | 4.1:+655621 | None:intergenic |
| TTTCTTTATCTTTGTGATCA+TGG | 0.279891 | 4.1:-655118 | MS.gene93781:CDS |
| ACCAAGGAGTCCTAATGTTT+TGG | 0.297547 | 4.1:+656938 | None:intergenic |
| GGTATGTATTTCTTAGGATT+TGG | 0.300998 | 4.1:+654820 | None:intergenic |
| CATGTGGTGCTGTTACTTTA+TGG | 0.301909 | 4.1:-655533 | MS.gene93781:CDS |
| AAGAAATTCAAAGATTCATT+TGG | 0.309732 | 4.1:-655988 | MS.gene93781:CDS |
| ACCTTCGTTTGTGTATGTTT+TGG | 0.313730 | 4.1:+654957 | None:intergenic |
| GGCTCTTCACACATGAAGTT+TGG | 0.314198 | 4.1:-656964 | MS.gene93781:CDS |
| AGGGATGGAAGTGTGATATA+TGG | 0.316910 | 4.1:-656578 | MS.gene93781:CDS |
| AAGTCGTCGGAGGCATATTC+CGG | 0.320238 | 4.1:+657623 | None:intergenic |
| CGATCACTTGATCGGTAGTC+AGG | 0.325900 | 4.1:-657659 | MS.gene93781:CDS |
| CTCCGACGACTTTAAATTAT+GGG | 0.335283 | 4.1:-657612 | MS.gene93781:CDS |
| TCAACATGATAGCTTGTTCA+TGG | 0.341489 | 4.1:-657425 | MS.gene93781:CDS |
| TCCAGTTGACATGGCTACTA+TGG | 0.351321 | 4.1:-655448 | MS.gene93781:CDS |
| TAGTGGATTAGTTGGTCTTA+AGG | 0.355480 | 4.1:-655944 | MS.gene93781:CDS |
| TACAGTTCATGATTCATGAT+TGG | 0.365374 | 4.1:-657401 | MS.gene93781:CDS |
| AGCTTCGAGGCCACCAGTGC+AGG | 0.374076 | 4.1:+657486 | None:intergenic |
| GGCTGGTTATTCCCTTCTGC+AGG | 0.375799 | 4.1:-656429 | MS.gene93781:CDS |
| AGTTTGGCTTCCAAAACATT+AGG | 0.378367 | 4.1:-656948 | MS.gene93781:CDS |
| CTCATTGCACATGATATTGA+TGG | 0.387523 | 4.1:-655486 | MS.gene93781:CDS |
| TGATTGGATTGATCATTTAG+AGG | 0.390749 | 4.1:-657385 | MS.gene93781:CDS |
| AACTCTTCAGTAAGCGAATA+GGG | 0.394166 | 4.1:+655901 | None:intergenic |
| CTACAGTCCAATCAATTGTA+TGG | 0.403949 | 4.1:+656177 | None:intergenic |
| AATCATCCCACTTACTAATT+GGG | 0.411286 | 4.1:+655268 | None:intergenic |
| CTACCGATCAAGTGATCGTC+GGG | 0.415701 | 4.1:+657664 | None:intergenic |
| ACTCTATAGGTATGCAAGAT+TGG | 0.417959 | 4.1:-656225 | MS.gene93781:CDS |
| GAACTCTTCAGTAAGCGAAT+AGG | 0.419424 | 4.1:+655900 | None:intergenic |
| ATTTCGAACATCACCGGATA+CGG | 0.419806 | 4.1:+656457 | None:intergenic |
| TCCATAGTAGCCATGTCAAC+TGG | 0.420756 | 4.1:+655447 | None:intergenic |
| TAGTTTATAGAGATAGAGAA+AGG | 0.421895 | 4.1:-655335 | MS.gene93781:CDS |
| AACACTAACATAGAAAAGTA+TGG | 0.422519 | 4.1:+657989 | None:intergenic |
| TGGCATCCATGAGGATCAAC+TGG | 0.432200 | 4.1:-656130 | MS.gene93781:intron |
| AAGACTAAGAAATTTCAAAC+TGG | 0.433686 | 4.1:-656985 | MS.gene93781:CDS |
| TTGATGATGAGCAACTCTAT+AGG | 0.440552 | 4.1:-656238 | MS.gene93781:CDS |
| TCTTTGTGATCATGGCTTCA+AGG | 0.441291 | 4.1:-655110 | MS.gene93781:intron |
| AGTTTATAGAGATAGAGAAA+GGG | 0.446296 | 4.1:-655334 | MS.gene93781:CDS |
| GGGTGGTTGCACGTGCCTGC+CGG | 0.447014 | 4.1:+657685 | None:intergenic |
| GGAGCAAATGTTAGTATCCA+TGG | 0.447899 | 4.1:-655565 | MS.gene93781:CDS |
| CCCTGGTCTCCAACCTCTTG+TGG | 0.448983 | 4.1:-658033 | MS.gene93781:CDS |
| GCCACAAGAGGTTGGAGACC+AGG | 0.457452 | 4.1:+658032 | None:intergenic |
| AGTTGCTCATCATCAAAATC+AGG | 0.460874 | 4.1:+656245 | None:intergenic |
| TCCAAAACATTAGGACTCCT+TGG | 0.461125 | 4.1:-656939 | MS.gene93781:CDS |
| CTTTCTTGCTAGAAGCTTCG+AGG | 0.462793 | 4.1:+657473 | None:intergenic |
| TCATTTAGAGGACACTGAAC+AGG | 0.462942 | 4.1:-657373 | MS.gene93781:intron |
| CCGGTGATGTTCGAAATTCA+TGG | 0.466050 | 4.1:-656451 | MS.gene93781:CDS |
| GCATAAGCTTCCAGTGTTGT+TGG | 0.466181 | 4.1:-657818 | MS.gene93781:CDS |
| CTTAAGGAGCCAAGAGATCA+TGG | 0.466526 | 4.1:-655928 | MS.gene93781:CDS |
| TAGGGAACTCCATGATCTCT+TGG | 0.467798 | 4.1:+655919 | None:intergenic |
| CGAAACATCAAGCCTACAAC+AGG | 0.469821 | 4.1:-655829 | MS.gene93781:CDS |
| GGGATGGAAGTGTGATATAT+GGG | 0.472264 | 4.1:-656577 | MS.gene93781:CDS |
| GAGGCCACCAGTGCAGGGTG+AGG | 0.479639 | 4.1:+657492 | None:intergenic |
| TACAATCTGTTGCATGTTGG+AGG | 0.481984 | 4.1:-657754 | MS.gene93781:CDS |
| CCCGAGCTTAGTGGATTAGT+TGG | 0.482142 | 4.1:-655952 | MS.gene93781:CDS |
| ATAAGCTTCCAGTGTTGTTG+GGG | 0.485280 | 4.1:-657816 | MS.gene93781:CDS |
| AGAAGGGAATGAGCAGAGTA+AGG | 0.488277 | 4.1:-656547 | MS.gene93781:CDS |
| GGTAGTCAGGGAACTATCAT+TGG | 0.489155 | 4.1:-657646 | MS.gene93781:CDS |
| TTTCGAAGGACAAGCTCCTC+AGG | 0.489212 | 4.1:+655847 | None:intergenic |
| ACCAACTAATCCACTAAGCT+CGG | 0.494691 | 4.1:+655951 | None:intergenic |
| GTTTATAGAGATAGAGAAAG+GGG | 0.495286 | 4.1:-655333 | MS.gene93781:CDS |
| AAACTGAAGATCTCAGAAGA+TGG | 0.498138 | 4.1:-656509 | MS.gene93781:CDS |
| GTAGCCATGTCAACTGGATC+AGG | 0.498191 | 4.1:+655453 | None:intergenic |
| GTGCCAATGACAGAAATGAT+AGG | 0.502812 | 4.1:-655624 | MS.gene93781:CDS |
| AGAAAAGTATGGTATCAAAG+AGG | 0.504773 | 4.1:+658000 | None:intergenic |
| TGATGATGATGTTGAGAAGC+TGG | 0.506358 | 4.1:-655202 | MS.gene93781:CDS |
| CTTTGATCTTCTTCTCAGCA+TGG | 0.506564 | 4.1:+655163 | None:intergenic |
| ATGAGGTTCCTTAGCCATGT+TGG | 0.507797 | 4.1:+655504 | None:intergenic |
| GATGTTCGAAATTCATGGGC+TGG | 0.508622 | 4.1:-656446 | MS.gene93781:CDS |
| AGACCCTCACCCTGCACTGG+TGG | 0.509737 | 4.1:-657496 | MS.gene93781:CDS |
| CTTTGAAGGATGTGATTGAC+AGG | 0.509857 | 4.1:-654909 | MS.gene93781:CDS |
| GAGAAGCTGGACTTGATAGT+TGG | 0.512234 | 4.1:-655189 | MS.gene93781:CDS |
| CAGCCGCTTGAGTAACCATC+AGG | 0.514618 | 4.1:+657033 | None:intergenic |
| ACCCCATAATTTAAAGTCGT+CGG | 0.514864 | 4.1:+657610 | None:intergenic |
| ATAGAGAAAGGGGAGTTGCA+AGG | 0.518453 | 4.1:-655323 | MS.gene93781:CDS |
| GACTTACCAGTTGATCCTCA+TGG | 0.521146 | 4.1:+656124 | None:intergenic |
| GTTAGACCCTCACCCTGCAC+TGG | 0.526913 | 4.1:-657499 | MS.gene93781:CDS |
| TTTCGAACATCACCGGATAC+GGG | 0.528141 | 4.1:+656458 | None:intergenic |
| GGAACTTTCCAACATGGCTA+AGG | 0.528495 | 4.1:-655512 | MS.gene93781:CDS |
| TTGGAGACCAGGGTGAATGA+AGG | 0.531161 | 4.1:+658043 | None:intergenic |
| CGTTACAATCTGTTGCATGT+TGG | 0.531167 | 4.1:-657757 | MS.gene93781:CDS |
| GAGAAAGGTATTCCCGTATC+CGG | 0.532581 | 4.1:-656470 | MS.gene93781:CDS |
| TAATAAACAAAGCCTGCAGA+AGG | 0.533377 | 4.1:+656417 | None:intergenic |
| AACTGAAGATCTCAGAAGAT+GGG | 0.535040 | 4.1:-656508 | MS.gene93781:CDS |
| CTTCTTGAGCATGATGAGAA+AGG | 0.538966 | 4.1:-656485 | MS.gene93781:CDS |
| AAACAAAACAGAGTCTTTGA+AGG | 0.539259 | 4.1:-654923 | MS.gene93781:CDS |
| GCTTCGAGGCCACCAGTGCA+GGG | 0.541610 | 4.1:+657487 | None:intergenic |
| TAATGATCCCAATTAGTAAG+TGG | 0.543779 | 4.1:-655275 | MS.gene93781:CDS |
| CTTTATGGAACTTTCCAACA+TGG | 0.544514 | 4.1:-655518 | MS.gene93781:CDS |
| TCTACACCCTTCATTCACCC+TGG | 0.544687 | 4.1:-658050 | MS.gene93781:CDS |
| ATGCTGAGAAGAAGATCAAA+GGG | 0.545504 | 4.1:-655161 | MS.gene93781:CDS |
| AGGCCACCAGTGCAGGGTGA+GGG | 0.545996 | 4.1:+657493 | None:intergenic |
| CTCAAGTGCATTCTCTGTGT+GGG | 0.546472 | 4.1:-654851 | MS.gene93781:CDS |
| GTCAGGGAACTATCATTGGC+CGG | 0.549049 | 4.1:-657642 | MS.gene93781:CDS |
| CGGTGATGTTCGAAATTCAT+GGG | 0.553151 | 4.1:-656450 | MS.gene93781:CDS |
| TTGTAGGCTTGATGTTTCGA+AGG | 0.557809 | 4.1:+655833 | None:intergenic |
| AGAAAGAGCTTCATAGACAC+AGG | 0.560247 | 4.1:-657456 | MS.gene93781:CDS |
| CATGCTGAGAAGAAGATCAA+AGG | 0.562475 | 4.1:-655162 | MS.gene93781:CDS |
| GGGGCTTATCTCAAATATAG+AGG | 0.563891 | 4.1:+654799 | None:intergenic |
| ATATATGGGAACAATGAGAA+GGG | 0.571299 | 4.1:-656563 | MS.gene93781:CDS |
| GATATATGGGAACAATGAGA+AGG | 0.571690 | 4.1:-656564 | MS.gene93781:CDS |
| CCATGAATTTCGAACATCAC+CGG | 0.573382 | 4.1:+656451 | None:intergenic |
| TGGAGACCAGGGTGAATGAA+GGG | 0.574228 | 4.1:+658044 | None:intergenic |
| ACCACATGGTTGGTGGCCCA+TGG | 0.575046 | 4.1:+655548 | None:intergenic |
| GAAAAGTATGGTATCAAAGA+GGG | 0.584808 | 4.1:+658001 | None:intergenic |
| TAACAGCACCACATGGTTGG+TGG | 0.592861 | 4.1:+655541 | None:intergenic |
| TATGCATATCGTACTCCGGC+AGG | 0.593657 | 4.1:-657700 | MS.gene93781:CDS |
| AAAACATTAGGACTCCTTGG+TGG | 0.596480 | 4.1:-656936 | MS.gene93781:intron |
| GCTCAAGTGCATTCTCTGTG+TGG | 0.597626 | 4.1:-654852 | MS.gene93781:CDS |
| CACCCCGACGATCACTTGAT+CGG | 0.601063 | 4.1:-657667 | MS.gene93781:CDS |
| GAGCAAATGTTAGTATCCAT+GGG | 0.602349 | 4.1:-655564 | MS.gene93781:CDS |
| AATGATCCCAATTAGTAAGT+GGG | 0.605393 | 4.1:-655274 | MS.gene93781:CDS |
| CCAACTAATCCACTAAGCTC+GGG | 0.606288 | 4.1:+655952 | None:intergenic |
| CCACAAGAGGTTGGAGACCA+GGG | 0.607968 | 4.1:+658033 | None:intergenic |
| AGAGTAAGGACATTCAAAGA+GGG | 0.611673 | 4.1:-656533 | MS.gene93781:CDS |
| AAGGGTGTAGAGAAAAGAGA+AGG | 0.612180 | 4.1:+658062 | None:intergenic |
| CATCAATATCATGTGCAATG+AGG | 0.613592 | 4.1:+655487 | None:intergenic |
| TGATTTAACAGATGATCAAG+AGG | 0.616215 | 4.1:-655250 | MS.gene93781:CDS |
| GTGGAAATCAGTGCTCCTGA+TGG | 0.623708 | 4.1:-657048 | MS.gene93781:CDS |
| TCCGACGACTTTAAATTATG+GGG | 0.625649 | 4.1:-657611 | MS.gene93781:intron |
| CAGAGTAAGGACATTCAAAG+AGG | 0.629292 | 4.1:-656534 | MS.gene93781:CDS |
| CAGAAATGATAGGAAAACAA+GGG | 0.629712 | 4.1:-655614 | MS.gene93781:CDS |
| GATCACTTGATCGGTAGTCA+GGG | 0.631545 | 4.1:-657658 | MS.gene93781:CDS |
| ACAGAAATGATAGGAAAACA+AGG | 0.633600 | 4.1:-655615 | MS.gene93781:CDS |
| AATAAACAAAGCCTGCAGAA+GGG | 0.635093 | 4.1:+656418 | None:intergenic |
| GTTGACATGGCTACTATGGA+AGG | 0.637307 | 4.1:-655444 | MS.gene93781:intron |
| GCTCCTGATGGTTACTCAAG+CGG | 0.639000 | 4.1:-657036 | MS.gene93781:CDS |
| TTGCATGTTGGAGGAGTGAG+TGG | 0.640130 | 4.1:-657745 | MS.gene93781:CDS |
| CGATCAAGTGATCGTCGGGG+TGG | 0.644828 | 4.1:+657668 | None:intergenic |
| AAGACCTGATCCAGTTGACA+TGG | 0.645059 | 4.1:-655457 | MS.gene93781:CDS |
| ACTACCGATCAAGTGATCGT+CGG | 0.652642 | 4.1:+657663 | None:intergenic |
| AAGTAACAGCACCACATGGT+TGG | 0.654011 | 4.1:+655538 | None:intergenic |
| TTGTGGACAAAATTGTGCTG+TGG | 0.655463 | 4.1:-657840 | MS.gene93781:CDS |
| TCCAAAACATACACAAACGA+AGG | 0.658132 | 4.1:-654958 | MS.gene93781:CDS |
| GGTTATTGAAGCTCTCAAAG+AGG | 0.662069 | 4.1:-655229 | MS.gene93781:CDS |
| AGAAATGATAGGAAAACAAG+GGG | 0.662137 | 4.1:-655613 | MS.gene93781:CDS |
| ACACTATGCATATCGTACTC+CGG | 0.664405 | 4.1:-657704 | MS.gene93781:CDS |
| TAAGCTTCCAGTGTTGTTGG+GGG | 0.664838 | 4.1:-657815 | MS.gene93781:CDS |
| CATAAAGTAACAGCACCACA+TGG | 0.666274 | 4.1:+655534 | None:intergenic |
| CCATAATTTAAAGTCGTCGG+AGG | 0.668887 | 4.1:+657613 | None:intergenic |
| GATGCATGCACTCTTGCCTG+AGG | 0.680891 | 4.1:-655863 | MS.gene93781:CDS |
| AATTAAACTACTTACCACCA+AGG | 0.695218 | 4.1:+656922 | None:intergenic |
| TCCATGGGCCACCAACCATG+TGG | 0.700524 | 4.1:-655549 | MS.gene93781:CDS |
| GAAAGAGCTTCATAGACACA+GGG | 0.708446 | 4.1:-657455 | MS.gene93781:CDS |
| TACCGATCAAGTGATCGTCG+GGG | 0.754460 | 4.1:+657665 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAGATAAAAGAATTAAA+TGG | + | chr4.1:655295-655314 | None:intergenic | 10.0% |
| !!! | CAAATAAAATTTGATTATTT+TGG | - | chr4.1:657810-657829 | MS.gene93781:CDS | 10.0% |
| !! | ATAAAAAATTCTTAACTCTT+GGG | + | chr4.1:657134-657153 | None:intergenic | 15.0% |
| !! | TGATAATATTGAATTTATGT+AGG | - | chr4.1:655000-655019 | MS.gene93781:CDS | 15.0% |
| !!! | ATAATTGCATATGTTATTTA+GGG | - | chr4.1:657226-657245 | MS.gene93781:intron | 15.0% |
| !!! | TATAATTGCATATGTTATTT+AGG | - | chr4.1:657225-657244 | MS.gene93781:intron | 15.0% |
| !! | AAAAATTTGAAAGTCTTTAG+AGG | + | chr4.1:655866-655885 | None:intergenic | 20.0% |
| !! | AAGAAATTCAAAGATTCATT+TGG | - | chr4.1:656884-656903 | MS.gene93781:intron | 20.0% |
| !! | CATAAAAAATTCTTAACTCT+TGG | + | chr4.1:657135-657154 | None:intergenic | 20.0% |
| !! | TCTATGTTAAATGAGAATAT+AGG | - | chr4.1:655556-655575 | MS.gene93781:CDS | 20.0% |
| !!! | AAAATTTGATTATTTTGGCT+TGG | - | chr4.1:657815-657834 | MS.gene93781:CDS | 20.0% |
| !!! | AGATTCATTTGGAAATATTT+TGG | - | chr4.1:656895-656914 | MS.gene93781:intron | 20.0% |
| !!! | GATTCATTTGGAAATATTTT+GGG | - | chr4.1:656896-656915 | MS.gene93781:intron | 20.0% |
| !!! | GTAAAACTTTCATTTTCTTT+TGG | - | chr4.1:656842-656861 | MS.gene93781:intron | 20.0% |
| !!! | TAGAGTTTACTATTGTTTTT+TGG | - | chr4.1:656258-656277 | MS.gene93781:intron | 20.0% |
| !!! | TTTTGGTATGTGAATTATTA+GGG | - | chr4.1:656275-656294 | MS.gene93781:intron | 20.0% |
| !!! | TTTTTGGTATGTGAATTATT+AGG | - | chr4.1:656274-656293 | MS.gene93781:intron | 20.0% |
| ! | AACACTAACATAGAAAAGTA+TGG | + | chr4.1:654886-654905 | None:intergenic | 25.0% |
| ! | AACACTTGTGAAGATATTTA+AGG | - | chr4.1:656038-656057 | MS.gene93781:intron | 25.0% |
| ! | AAGACTAAGAAATTTCAAAC+TGG | - | chr4.1:655887-655906 | MS.gene93781:CDS | 25.0% |
| ! | AGTTTATAGAGATAGAGAAA+GGG | - | chr4.1:657538-657557 | MS.gene93781:intron | 25.0% |
| ! | CAAAAATCCATACAATTGAT+TGG | - | chr4.1:656688-656707 | MS.gene93781:intron | 25.0% |
| ! | CTTAGATCCAAATTACATTA+AGG | + | chr4.1:655771-655790 | None:intergenic | 25.0% |
| ! | GAAAAAAGGCTTTCAAAAAT+AGG | - | chr4.1:657281-657300 | MS.gene93781:intron | 25.0% |
| ! | GTTGAACCATCAAATTTAAA+AGG | + | chr4.1:656173-656192 | None:intergenic | 25.0% |
| ! | TAGTTTATAGAGATAGAGAA+AGG | - | chr4.1:657537-657556 | MS.gene93781:intron | 25.0% |
| ! | TCCAAAACCTTAATGTAATT+TGG | - | chr4.1:655761-655780 | MS.gene93781:intron | 25.0% |
| ! | TGTCAGTGTAAAAACTAAAA+AGG | + | chr4.1:656119-656138 | None:intergenic | 25.0% |
| ! | TTTCTTTATCTTTGTGATCA+TGG | - | chr4.1:657754-657773 | MS.gene93781:CDS | 25.0% |
| !! | CTTAAAAACTGATACTCTTT+TGG | - | chr4.1:656722-656741 | MS.gene93781:intron | 25.0% |
| !! | TAACCACCTTTTAAATTTGA+TGG | - | chr4.1:656164-656183 | MS.gene93781:CDS | 25.0% |
| !! | TATAGAGGTATGTATTTCTT+AGG | + | chr4.1:658061-658080 | None:intergenic | 25.0% |
| !! | TCCAAATTACATTAAGGTTT+TGG | + | chr4.1:655765-655784 | None:intergenic | 25.0% |
| !! | TTTTCATCTGTTGTATAACT+TGG | - | chr4.1:656523-656542 | MS.gene93781:CDS | 25.0% |
| !!! | AGATAAGAGTATACTTTTCA+AGG | + | chr4.1:657090-657109 | None:intergenic | 25.0% |
| !!! | GAAAACATTTTTTCATAGTG+TGG | - | chr4.1:657179-657198 | MS.gene93781:intron | 25.0% |
| !!! | TATACTTTTCAAGGATTGAA+GGG | + | chr4.1:657081-657100 | None:intergenic | 25.0% |
| !!! | TGCATATGGATATATTTTGA+AGG | - | chr4.1:656771-656790 | MS.gene93781:intron | 25.0% |
| !!! | TTTTTTTGTTCTTTGCTTAC+AGG | - | chr4.1:656596-656615 | MS.gene93781:intron | 25.0% |
| AAACAAAACAGAGTCTTTGA+AGG | - | chr4.1:657949-657968 | MS.gene93781:intron | 30.0% | |
| AAATCATCCCACTTACTAAT+TGG | + | chr4.1:657608-657627 | None:intergenic | 30.0% | |
| AAGGCTTTCAAAAATAGGAA+TGG | - | chr4.1:657286-657305 | MS.gene93781:intron | 30.0% | |
| AATCATCCCACTTACTAATT+GGG | + | chr4.1:657607-657626 | None:intergenic | 30.0% | |
| AATGATCCCAATTAGTAAGT+GGG | - | chr4.1:657598-657617 | MS.gene93781:intron | 30.0% | |
| AATTAAACTACTTACCACCA+AGG | + | chr4.1:655953-655972 | None:intergenic | 30.0% | |
| ACAGAAATGATAGGAAAACA+AGG | - | chr4.1:657257-657276 | MS.gene93781:intron | 30.0% | |
| AGAAATGATAGGAAAACAAG+GGG | - | chr4.1:657259-657278 | MS.gene93781:intron | 30.0% | |
| AGCTATGTATGTTTAGATTC+GGG | + | chr4.1:655670-655689 | None:intergenic | 30.0% | |
| AGCTGTATCTGATGTAAAAA+AGG | - | chr4.1:655686-655705 | MS.gene93781:intron | 30.0% | |
| ATATATGGGAACAATGAGAA+GGG | - | chr4.1:656309-656328 | MS.gene93781:intron | 30.0% | |
| CAGAAATGATAGGAAAACAA+GGG | - | chr4.1:657258-657277 | MS.gene93781:intron | 30.0% | |
| CAGCTATGTATGTTTAGATT+CGG | + | chr4.1:655671-655690 | None:intergenic | 30.0% | |
| CATTATGCAAGAAATGCAAT+TGG | + | chr4.1:655794-655813 | None:intergenic | 30.0% | |
| GAACCATCAAATTTAAAAGG+TGG | + | chr4.1:656170-656189 | None:intergenic | 30.0% | |
| GCTGTATCTGATGTAAAAAA+GGG | - | chr4.1:655687-655706 | MS.gene93781:intron | 30.0% | |
| GGTATGTATTTCTTAGGATT+TGG | + | chr4.1:658055-658074 | None:intergenic | 30.0% | |
| GTTTATAGAGATAGAGAAAG+GGG | - | chr4.1:657539-657558 | MS.gene93781:intron | 30.0% | |
| TAAGGAACTGATGTAACAAA+GGG | - | chr4.1:656056-656075 | MS.gene93781:intron | 30.0% | |
| TAATGATCCCAATTAGTAAG+TGG | - | chr4.1:657597-657616 | MS.gene93781:intron | 30.0% | |
| TACAGTTCATGATTCATGAT+TGG | - | chr4.1:655471-655490 | MS.gene93781:CDS | 30.0% | |
| TATCTTCACAAGTGTTTACA+TGG | + | chr4.1:656034-656053 | None:intergenic | 30.0% | |
| TGATTGGATTGATCATTTAG+AGG | - | chr4.1:655487-655506 | MS.gene93781:CDS | 30.0% | |
| TGATTTAACAGATGATCAAG+AGG | - | chr4.1:657622-657641 | MS.gene93781:CDS | 30.0% | |
| TGCATTTCTTGCATAATGTT+TGG | - | chr4.1:655796-655815 | MS.gene93781:intron | 30.0% | |
| TTAAGGAACTGATGTAACAA+AGG | - | chr4.1:656055-656074 | MS.gene93781:intron | 30.0% | |
| TTTCCTATCATTTCTGTCAT+TGG | + | chr4.1:657254-657273 | None:intergenic | 30.0% | |
| ! | AACTTTCATTTTCTTTTGGC+AGG | - | chr4.1:656846-656865 | MS.gene93781:intron | 30.0% |
| ! | AGAAAAGTATGGTATCAAAG+AGG | + | chr4.1:654875-654894 | None:intergenic | 30.0% |
| ! | GAAAAGTATGGTATCAAAGA+GGG | + | chr4.1:654874-654893 | None:intergenic | 30.0% |
| ! | TATGTAGGTGATACATTTTG+TGG | - | chr4.1:655015-655034 | MS.gene93781:intron | 30.0% |
| ! | TCTTGCATAATGTTTGGAAT+AGG | - | chr4.1:655802-655821 | MS.gene93781:CDS | 30.0% |
| !! | GTATACTTTTCAAGGATTGA+AGG | + | chr4.1:657082-657101 | None:intergenic | 30.0% |
| !!! | ACATTAAGGTTTTGGAGAAT+TGG | + | chr4.1:655757-655776 | None:intergenic | 30.0% |
| !!! | TATTTTGGCTTGGAATCTTA+TGG | - | chr4.1:657825-657844 | MS.gene93781:CDS | 30.0% |
| AAACTGAAGATCTCAGAAGA+TGG | - | chr4.1:656363-656382 | MS.gene93781:intron | 35.0% | |
| AACTCTTCAGTAAGCGAATA+GGG | + | chr4.1:656974-656993 | None:intergenic | 35.0% | |
| AACTGAAGATCTCAGAAGAT+GGG | - | chr4.1:656364-656383 | MS.gene93781:intron | 35.0% | |
| AAGAGTTCACGAGTGTTTAT+AGG | - | chr4.1:656987-657006 | MS.gene93781:CDS | 35.0% | |
| AATAAACAAAGCCTGCAGAA+GGG | + | chr4.1:656457-656476 | None:intergenic | 35.0% | |
| ACTCTATAGGTATGCAAGAT+TGG | - | chr4.1:656647-656666 | MS.gene93781:intron | 35.0% | |
| AGAGTAAGGACATTCAAAGA+GGG | - | chr4.1:656339-656358 | MS.gene93781:intron | 35.0% | |
| AGTTCAGCAAACAGGATTAT+TGG | - | chr4.1:656220-656239 | MS.gene93781:CDS | 35.0% | |
| AGTTGCTCATCATCAAAATC+AGG | + | chr4.1:656630-656649 | None:intergenic | 35.0% | |
| ATGCTGAGAAGAAGATCAAA+GGG | - | chr4.1:657711-657730 | MS.gene93781:CDS | 35.0% | |
| CATCAATATCATGTGCAATG+AGG | + | chr4.1:657388-657407 | None:intergenic | 35.0% | |
| CTACAGTCCAATCAATTGTA+TGG | + | chr4.1:656698-656717 | None:intergenic | 35.0% | |
| CTCATTGCACATGATATTGA+TGG | - | chr4.1:657386-657405 | MS.gene93781:CDS | 35.0% | |
| CTCCGACGACTTTAAATTAT+GGG | - | chr4.1:655260-655279 | MS.gene93781:CDS | 35.0% | |
| CTTTATGGAACTTTCCAACA+TGG | - | chr4.1:657354-657373 | MS.gene93781:intron | 35.0% | |
| GAGCAAATGTTAGTATCCAT+GGG | - | chr4.1:657308-657327 | MS.gene93781:intron | 35.0% | |
| GATATATGGGAACAATGAGA+AGG | - | chr4.1:656308-656327 | MS.gene93781:intron | 35.0% | |
| GGTATGTGAATTATTAGGGA+TGG | - | chr4.1:656279-656298 | MS.gene93781:intron | 35.0% | |
| TAATAAACAAAGCCTGCAGA+AGG | + | chr4.1:656458-656477 | None:intergenic | 35.0% | |
| TAGGAAAACAAGGGGAAAAA+AGG | - | chr4.1:657267-657286 | MS.gene93781:intron | 35.0% | |
| TCCAAAACATACACAAACGA+AGG | - | chr4.1:657914-657933 | MS.gene93781:intron | 35.0% | |
| TCCGACGACTTTAAATTATG+GGG | - | chr4.1:655261-655280 | MS.gene93781:CDS | 35.0% | |
| ! | ACCCCATAATTTAAAGTCGT+CGG | + | chr4.1:655265-655284 | None:intergenic | 35.0% |
| ! | ACCTTCGTTTGTGTATGTTT+TGG | + | chr4.1:657918-657937 | None:intergenic | 35.0% |
| ! | AGTTTGGCTTCCAAAACATT+AGG | - | chr4.1:655924-655943 | MS.gene93781:CDS | 35.0% |
| ! | ATCCAATTTTCAGTCATCTC+AGG | + | chr4.1:657995-658014 | None:intergenic | 35.0% |
| ! | GAAGATTTAGTTCAGCAAAC+AGG | - | chr4.1:656212-656231 | MS.gene93781:CDS | 35.0% |
| ! | TACAAAAGCATGCTTGCAAA+AGG | + | chr4.1:657469-657488 | None:intergenic | 35.0% |
| ! | TCATTTTCTTTTGGCAGGTA+TGG | - | chr4.1:656851-656870 | MS.gene93781:intron | 35.0% |
| ! | TCCAATTTTCAGTCATCTCA+GGG | + | chr4.1:657994-658013 | None:intergenic | 35.0% |
| ! | TGCATAATGTTTGGAATAGG+TGG | - | chr4.1:655805-655824 | MS.gene93781:CDS | 35.0% |
| ! | TGGAATCTTATGGTTTTCTG+TGG | - | chr4.1:657835-657854 | MS.gene93781:CDS | 35.0% |
| ! | TTTGGCAGGTATGGATTTTT+GGG | - | chr4.1:656860-656879 | MS.gene93781:intron | 35.0% |
| ! | TTTTGGCAGGTATGGATTTT+TGG | - | chr4.1:656859-656878 | MS.gene93781:intron | 35.0% |
| !! | GGATATATTTTGAAGGAGAC+AGG | - | chr4.1:656778-656797 | MS.gene93781:intron | 35.0% |
| !! | TAGTGGATTAGTTGGTCTTA+AGG | - | chr4.1:656928-656947 | MS.gene93781:intron | 35.0% |
| !! | TCAACATGATAGCTTGTTCA+TGG | - | chr4.1:655447-655466 | MS.gene93781:CDS | 35.0% |
| !! | TTGATGATGAGCAACTCTAT+AGG | - | chr4.1:656634-656653 | MS.gene93781:intron | 35.0% |
| !!! | ACACAAACGAAGGTTTTGAA+TGG | - | chr4.1:657924-657943 | MS.gene93781:intron | 35.0% |
| !!! | CACAAACGAAGGTTTTGAAT+GGG | - | chr4.1:657925-657944 | MS.gene93781:intron | 35.0% |
| !!! | TAAGGTTTTGGAGAATTGGT+TGG | + | chr4.1:655753-655772 | None:intergenic | 35.0% |
| AAAACATTAGGACTCCTTGG+TGG | - | chr4.1:655936-655955 | MS.gene93781:CDS | 40.0% | |
| AAAACGCGCATTAATTTCCG+AGG | + | chr4.1:656580-656599 | None:intergenic | 40.0% | |
| ACACTATGCATATCGTACTC+CGG | - | chr4.1:655168-655187 | MS.gene93781:CDS | 40.0% | |
| ACCAACTAATCCACTAAGCT+CGG | + | chr4.1:656924-656943 | None:intergenic | 40.0% | |
| AGAAAGAGCTTCATAGACAC+AGG | - | chr4.1:655416-655435 | MS.gene93781:intron | 40.0% | |
| ATTTCGAACATCACCGGATA+CGG | + | chr4.1:656418-656437 | None:intergenic | 40.0% | |
| CAGAGTAAGGACATTCAAAG+AGG | - | chr4.1:656338-656357 | MS.gene93781:intron | 40.0% | |
| CATAAAGTAACAGCACCACA+TGG | + | chr4.1:657341-657360 | None:intergenic | 40.0% | |
| CATGCTGAGAAGAAGATCAA+AGG | - | chr4.1:657710-657729 | MS.gene93781:CDS | 40.0% | |
| CATTTGTCTTCTCCTGTTGT+AGG | + | chr4.1:657058-657077 | None:intergenic | 40.0% | |
| CCATGAATTTCGAACATCAC+CGG | + | chr4.1:656424-656443 | None:intergenic | 40.0% | |
| CCTCCGACGACTTTAAATTA+TGG | - | chr4.1:655259-655278 | MS.gene93781:CDS | 40.0% | |
| CGGTGATGTTCGAAATTCAT+GGG | - | chr4.1:656422-656441 | MS.gene93781:CDS | 40.0% | |
| CGTTACAATCTGTTGCATGT+TGG | - | chr4.1:655115-655134 | MS.gene93781:CDS | 40.0% | |
| CTGTGGTGACTATGATGTTT+AGG | - | chr4.1:657852-657871 | MS.gene93781:CDS | 40.0% | |
| CTTCTTGAGCATGATGAGAA+AGG | - | chr4.1:656387-656406 | MS.gene93781:CDS | 40.0% | |
| CTTTGATCTTCTTCTCAGCA+TGG | + | chr4.1:657712-657731 | None:intergenic | 40.0% | |
| GAAAGAGCTTCATAGACACA+GGG | - | chr4.1:655417-655436 | MS.gene93781:intron | 40.0% | |
| GAACTCTTCAGTAAGCGAAT+AGG | + | chr4.1:656975-656994 | None:intergenic | 40.0% | |
| GATGTAAAAAAGGGACACGA+TGG | - | chr4.1:655696-655715 | MS.gene93781:intron | 40.0% | |
| GGAGCAAATGTTAGTATCCA+TGG | - | chr4.1:657307-657326 | MS.gene93781:intron | 40.0% | |
| GGGCAATATACTTGGGAATT+AGG | - | chr4.1:655077-655096 | MS.gene93781:intron | 40.0% | |
| GGTTATTGAAGCTCTCAAAG+AGG | - | chr4.1:657643-657662 | MS.gene93781:CDS | 40.0% | |
| GTGCCAATGACAGAAATGAT+AGG | - | chr4.1:657248-657267 | MS.gene93781:intron | 40.0% | |
| TACAATCTGTTGCATGTTGG+AGG | - | chr4.1:655118-655137 | MS.gene93781:CDS | 40.0% | |
| TCAACTGGTAAGTCTGCATA+TGG | - | chr4.1:656757-656776 | MS.gene93781:intron | 40.0% | |
| TCATTTAGAGGACACTGAAC+AGG | - | chr4.1:655499-655518 | MS.gene93781:CDS | 40.0% | |
| TCCAAAACATTAGGACTCCT+TGG | - | chr4.1:655933-655952 | MS.gene93781:CDS | 40.0% | |
| TCCCTGAGATGACTGAAAAT+TGG | - | chr4.1:657990-658009 | MS.gene93781:intron | 40.0% | |
| TCTTTGTGATCATGGCTTCA+AGG | - | chr4.1:657762-657781 | MS.gene93781:CDS | 40.0% | |
| TGGTGACTATGATGTTTAGG+AGG | - | chr4.1:657855-657874 | MS.gene93781:intron | 40.0% | |
| TTGTAGGCTTGATGTTTCGA+AGG | + | chr4.1:657042-657061 | None:intergenic | 40.0% | |
| TTGTGGACAAAATTGTGCTG+TGG | - | chr4.1:655032-655051 | MS.gene93781:intron | 40.0% | |
| TTGTTGGGGGCAATATACTT+GGG | - | chr4.1:655070-655089 | MS.gene93781:intron | 40.0% | |
| ! | AAGGGTGTAGAGAAAAGAGA+AGG | + | chr4.1:654813-654832 | None:intergenic | 40.0% |
| ! | ACCAAGGAGTCCTAATGTTT+TGG | + | chr4.1:655937-655956 | None:intergenic | 40.0% |
| ! | AGGGATGGAAGTGTGATATA+TGG | - | chr4.1:656294-656313 | MS.gene93781:intron | 40.0% |
| ! | ATAAGCTTCCAGTGTTGTTG+GGG | - | chr4.1:655056-655075 | MS.gene93781:intron | 40.0% |
| ! | ATACTCTTTTGGCATCCATG+AGG | - | chr4.1:656733-656752 | MS.gene93781:intron | 40.0% |
| ! | CATAAGCTTCCAGTGTTGTT+GGG | - | chr4.1:655055-655074 | MS.gene93781:intron | 40.0% |
| ! | CCATAATTTAAAGTCGTCGG+AGG | + | chr4.1:655262-655281 | None:intergenic | 40.0% |
| ! | CTTTGAAGGATGTGATTGAC+AGG | - | chr4.1:657963-657982 | MS.gene93781:intron | 40.0% |
| ! | GGGATGGAAGTGTGATATAT+GGG | - | chr4.1:656295-656314 | MS.gene93781:intron | 40.0% |
| ! | GGTATCAAAGAGGGTCATTT+TGG | + | chr4.1:654865-654884 | None:intergenic | 40.0% |
| ! | TGATGATGATGTTGAGAAGC+TGG | - | chr4.1:657670-657689 | MS.gene93781:CDS | 40.0% |
| ! | TTGGCAGGTATGGATTTTTG+GGG | - | chr4.1:656861-656880 | MS.gene93781:intron | 40.0% |
| !! | CATGTGGTGCTGTTACTTTA+TGG | - | chr4.1:657339-657358 | MS.gene93781:intron | 40.0% |
| !!! | ACTGCACTCATTTTTTGCCT+CGG | - | chr4.1:656560-656579 | MS.gene93781:CDS | 40.0% |
| AAGACCTGATCCAGTTGACA+TGG | - | chr4.1:657415-657434 | MS.gene93781:CDS | 45.0% | |
| AAGTAACAGCACCACATGGT+TGG | + | chr4.1:657337-657356 | None:intergenic | 45.0% | |
| ACTACCGATCAAGTGATCGT+CGG | + | chr4.1:655212-655231 | None:intergenic | 45.0% | |
| AGAAGGGAATGAGCAGAGTA+AGG | - | chr4.1:656325-656344 | MS.gene93781:intron | 45.0% | |
| ATAGAGAAAGGGGAGTTGCA+AGG | - | chr4.1:657549-657568 | MS.gene93781:intron | 45.0% | |
| ATGAGGTTCCTTAGCCATGT+TGG | + | chr4.1:657371-657390 | None:intergenic | 45.0% | |
| ATGAGTGCAGTGGCAGAAAA+TGG | + | chr4.1:656551-656570 | None:intergenic | 45.0% | |
| CCAACTAATCCACTAAGCTC+GGG | + | chr4.1:656923-656942 | None:intergenic | 45.0% | |
| CCGGTGATGTTCGAAATTCA+TGG | - | chr4.1:656421-656440 | MS.gene93781:CDS | 45.0% | |
| CGAAACATCAAGCCTACAAC+AGG | - | chr4.1:657043-657062 | MS.gene93781:CDS | 45.0% | |
| CTCAAGTGCATTCTCTGTGT+GGG | - | chr4.1:658021-658040 | MS.gene93781:CDS | 45.0% | |
| CTTAAGGAGCCAAGAGATCA+TGG | - | chr4.1:656944-656963 | MS.gene93781:CDS | 45.0% | |
| CTTTCTTGCTAGAAGCTTCG+AGG | + | chr4.1:655402-655421 | None:intergenic | 45.0% | |
| GACTTACCAGTTGATCCTCA+TGG | + | chr4.1:656751-656770 | None:intergenic | 45.0% | |
| GAGGCAAAAAATGAGTGCAG+TGG | + | chr4.1:656561-656580 | None:intergenic | 45.0% | |
| GATCACTTGATCGGTAGTCA+GGG | - | chr4.1:655214-655233 | MS.gene93781:CDS | 45.0% | |
| GATGTTCGAAATTCATGGGC+TGG | - | chr4.1:656426-656445 | MS.gene93781:CDS | 45.0% | |
| GCATAAGCTTCCAGTGTTGT+TGG | - | chr4.1:655054-655073 | MS.gene93781:intron | 45.0% | |
| GGAACTTTCCAACATGGCTA+AGG | - | chr4.1:657360-657379 | MS.gene93781:intron | 45.0% | |
| GGCTCTTCACACATGAAGTT+TGG | - | chr4.1:655908-655927 | MS.gene93781:CDS | 45.0% | |
| GGTAGTCAGGGAACTATCAT+TGG | - | chr4.1:655226-655245 | MS.gene93781:CDS | 45.0% | |
| GTTGACATGGCTACTATGGA+AGG | - | chr4.1:657428-657447 | MS.gene93781:CDS | 45.0% | |
| GTTGTTGGGGGCAATATACT+TGG | - | chr4.1:655069-655088 | MS.gene93781:intron | 45.0% | |
| TAGGGAACTCCATGATCTCT+TGG | + | chr4.1:656956-656975 | None:intergenic | 45.0% | |
| TATATTGCCCCCAACAACAC+TGG | + | chr4.1:655067-655086 | None:intergenic | 45.0% | |
| TCCAGTTGACATGGCTACTA+TGG | - | chr4.1:657424-657443 | MS.gene93781:CDS | 45.0% | |
| TCCATAGTAGCCATGTCAAC+TGG | + | chr4.1:657428-657447 | None:intergenic | 45.0% | |
| TTTCGAACATCACCGGATAC+GGG | + | chr4.1:656417-656436 | None:intergenic | 45.0% | |
| ! | GAGAAGCTGGACTTGATAGT+TGG | - | chr4.1:657683-657702 | MS.gene93781:CDS | 45.0% |
| ! | TAAGCTTCCAGTGTTGTTGG+GGG | - | chr4.1:655057-655076 | MS.gene93781:intron | 45.0% |
| !! | AGTGTGGTTCTGAATGCGAA+GGG | - | chr4.1:657195-657214 | MS.gene93781:intron | 45.0% |
| !! | GAGAAAGGTATTCCCGTATC+CGG | - | chr4.1:656402-656421 | MS.gene93781:CDS | 45.0% |
| !! | TAGTGTGGTTCTGAATGCGA+AGG | - | chr4.1:657194-657213 | MS.gene93781:intron | 45.0% |
| !! | TCATTTTGGCCACAAGAGGT+TGG | + | chr4.1:654851-654870 | None:intergenic | 45.0% |
| !! | CATATATAATTAATAAATAT+TGG | + | chr4.1:655526-655545 | None:intergenic | 5.0% |
| CGATCACTTGATCGGTAGTC+AGG | - | chr4.1:655213-655232 | MS.gene93781:CDS | 50.0% | |
| CTACCGATCAAGTGATCGTC+GGG | + | chr4.1:655211-655230 | None:intergenic | 50.0% | |
| GCTCAAGTGCATTCTCTGTG+TGG | - | chr4.1:658020-658039 | MS.gene93781:CDS | 50.0% | |
| GCTCCTGATGGTTACTCAAG+CGG | - | chr4.1:655836-655855 | MS.gene93781:CDS | 50.0% | |
| GTAGCCATGTCAACTGGATC+AGG | + | chr4.1:657422-657441 | None:intergenic | 50.0% | |
| GTCAGGGAACTATCATTGGC+CGG | - | chr4.1:655230-655249 | MS.gene93781:CDS | 50.0% | |
| GTGGAAATCAGTGCTCCTGA+TGG | - | chr4.1:655824-655843 | MS.gene93781:CDS | 50.0% | |
| TAACAGCACCACATGGTTGG+TGG | + | chr4.1:657334-657353 | None:intergenic | 50.0% | |
| TACCGATCAAGTGATCGTCG+GGG | + | chr4.1:655210-655229 | None:intergenic | 50.0% | |
| TATGCATATCGTACTCCGGC+AGG | - | chr4.1:655172-655191 | MS.gene93781:CDS | 50.0% | |
| TCTACACCCTTCATTCACCC+TGG | - | chr4.1:654822-654841 | MS.gene93781:CDS | 50.0% | |
| TGGAGACCAGGGTGAATGAA+GGG | + | chr4.1:654831-654850 | None:intergenic | 50.0% | |
| TGGCATCCATGAGGATCAAC+TGG | - | chr4.1:656742-656761 | MS.gene93781:intron | 50.0% | |
| TTGCATGTTGGAGGAGTGAG+TGG | - | chr4.1:655127-655146 | MS.gene93781:CDS | 50.0% | |
| TTGGAGACCAGGGTGAATGA+AGG | + | chr4.1:654832-654851 | None:intergenic | 50.0% | |
| TTTCGAAGGACAAGCTCCTC+AGG | + | chr4.1:657028-657047 | None:intergenic | 50.0% | |
| ! | AAGTCGTCGGAGGCATATTC+CGG | + | chr4.1:655252-655271 | None:intergenic | 50.0% |
| !! | AGGGTCATTTTGGCCACAAG+AGG | + | chr4.1:654855-654874 | None:intergenic | 50.0% |
| !! | CCCGAGCTTAGTGGATTAGT+TGG | - | chr4.1:656920-656939 | MS.gene93781:intron | 50.0% |
| !!! | ATTTTGGGACCCGAGCTTAG+TGG | - | chr4.1:656911-656930 | MS.gene93781:intron | 50.0% |
| CACCCCGACGATCACTTGAT+CGG | - | chr4.1:655205-655224 | MS.gene93781:CDS | 55.0% | |
| CAGCCGCTTGAGTAACCATC+AGG | + | chr4.1:655842-655861 | None:intergenic | 55.0% | |
| CCACAAGAGGTTGGAGACCA+GGG | + | chr4.1:654842-654861 | None:intergenic | 55.0% | |
| GATGCATGCACTCTTGCCTG+AGG | - | chr4.1:657009-657028 | MS.gene93781:CDS | 55.0% | |
| ! | GGCTGGTTATTCCCTTCTGC+AGG | - | chr4.1:656443-656462 | MS.gene93781:CDS | 55.0% |
| CCCTGGTCTCCAACCTCTTG+TGG | - | chr4.1:654839-654858 | MS.gene93781:CDS | 60.0% | |
| CGATCAAGTGATCGTCGGGG+TGG | + | chr4.1:655207-655226 | None:intergenic | 60.0% | |
| GCCACAAGAGGTTGGAGACC+AGG | + | chr4.1:654843-654862 | None:intergenic | 60.0% | |
| GTTAGACCCTCACCCTGCAC+TGG | - | chr4.1:655373-655392 | MS.gene93781:intron | 60.0% | |
| TCCATGGGCCACCAACCATG+TGG | - | chr4.1:657323-657342 | MS.gene93781:intron | 60.0% | |
| !! | ACCACATGGTTGGTGGCCCA+TGG | + | chr4.1:657327-657346 | None:intergenic | 60.0% |
| AGACCCTCACCCTGCACTGG+TGG | - | chr4.1:655376-655395 | MS.gene93781:intron | 65.0% | |
| AGCTTCGAGGCCACCAGTGC+AGG | + | chr4.1:655389-655408 | None:intergenic | 65.0% | |
| AGGCCACCAGTGCAGGGTGA+GGG | + | chr4.1:655382-655401 | None:intergenic | 65.0% | |
| GCTTCGAGGCCACCAGTGCA+GGG | + | chr4.1:655388-655407 | None:intergenic | 65.0% | |
| GAGGCCACCAGTGCAGGGTG+AGG | + | chr4.1:655383-655402 | None:intergenic | 70.0% | |
| GGGTGGTTGCACGTGCCTGC+CGG | + | chr4.1:655190-655209 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 654804 | 658090 | 654804 | ID=MS.gene93781 |
| chr4.1 | mRNA | 654804 | 658090 | 654804 | ID=MS.gene93781.t1;Parent=MS.gene93781 |
| chr4.1 | exon | 657998 | 658090 | 657998 | ID=MS.gene93781.t1.exon1;Parent=MS.gene93781.t1 |
| chr4.1 | CDS | 657998 | 658090 | 657998 | ID=cds.MS.gene93781.t1;Parent=MS.gene93781.t1 |
| chr4.1 | exon | 657612 | 657872 | 657612 | ID=MS.gene93781.t1.exon2;Parent=MS.gene93781.t1 |
| chr4.1 | CDS | 657612 | 657872 | 657612 | ID=cds.MS.gene93781.t1;Parent=MS.gene93781.t1 |
| chr4.1 | exon | 657374 | 657523 | 657374 | ID=MS.gene93781.t1.exon3;Parent=MS.gene93781.t1 |
| chr4.1 | CDS | 657374 | 657523 | 657374 | ID=cds.MS.gene93781.t1;Parent=MS.gene93781.t1 |
| chr4.1 | exon | 656937 | 657070 | 656937 | ID=MS.gene93781.t1.exon4;Parent=MS.gene93781.t1 |
| chr4.1 | CDS | 656937 | 657070 | 656937 | ID=cds.MS.gene93781.t1;Parent=MS.gene93781.t1 |
| chr4.1 | exon | 656385 | 656598 | 656385 | ID=MS.gene93781.t1.exon5;Parent=MS.gene93781.t1 |
| chr4.1 | CDS | 656385 | 656598 | 656385 | ID=cds.MS.gene93781.t1;Parent=MS.gene93781.t1 |
| chr4.1 | exon | 656131 | 656276 | 656131 | ID=MS.gene93781.t1.exon6;Parent=MS.gene93781.t1 |
| chr4.1 | CDS | 656131 | 656276 | 656131 | ID=cds.MS.gene93781.t1;Parent=MS.gene93781.t1 |
| chr4.1 | exon | 655799 | 656026 | 655799 | ID=MS.gene93781.t1.exon7;Parent=MS.gene93781.t1 |
| chr4.1 | CDS | 655799 | 656026 | 655799 | ID=cds.MS.gene93781.t1;Parent=MS.gene93781.t1 |
| chr4.1 | exon | 655445 | 655647 | 655445 | ID=MS.gene93781.t1.exon8;Parent=MS.gene93781.t1 |
| chr4.1 | CDS | 655445 | 655647 | 655445 | ID=cds.MS.gene93781.t1;Parent=MS.gene93781.t1 |
| chr4.1 | exon | 655111 | 655354 | 655111 | ID=MS.gene93781.t1.exon9;Parent=MS.gene93781.t1 |
| chr4.1 | CDS | 655111 | 655354 | 655111 | ID=cds.MS.gene93781.t1;Parent=MS.gene93781.t1 |
| chr4.1 | exon | 654804 | 655020 | 654804 | ID=MS.gene93781.t1.exon10;Parent=MS.gene93781.t1 |
| chr4.1 | CDS | 654804 | 655020 | 654804 | ID=cds.MS.gene93781.t1;Parent=MS.gene93781.t1 |
| Gene Sequence |
| Protein sequence |
