AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene21126

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene21126.t1 MTR_3g008640 95.816 478 18 1 1 478 52 527 0.0 966
MS.gene21126.t1 MTR_3g008700 95.816 478 18 1 1 478 52 527 0.0 965
MS.gene21126.t1 MTR_3g008720 95.607 478 19 1 1 478 52 527 0.0 962
MS.gene21126.t1 MTR_3g033690 93.724 478 27 2 1 478 52 526 0.0 941
MS.gene21126.t1 MTR_7g053360 95.188 478 21 1 1 478 52 527 0.0 937
MS.gene21126.t1 MTR_4g035980 66.250 480 150 5 7 478 64 539 0.0 661
MS.gene21126.t1 MTR_4g025690 54.412 476 201 10 4 478 53 513 8.05e-171 491
MS.gene21126.t1 MTR_4g025730 49.174 484 217 13 2 478 48 509 2.90e-155 451
MS.gene21126.t1 MTR_8g104655 46.311 488 231 8 12 478 64 541 2.57e-149 437
MS.gene21126.t1 MTR_7g108905 48.190 442 206 8 51 474 116 552 2.33e-141 417
MS.gene21126.t1 MTR_8g104645 56.598 341 141 3 142 478 35 372 3.86e-138 402
MS.gene21126.t1 MTR_7g050980 47.390 479 225 12 16 478 88 555 9.63e-138 408
MS.gene21126.t1 MTR_7g050870 48.246 456 211 12 37 478 110 554 6.27e-135 400
MS.gene21126.t1 MTR_7g050950 48.747 439 203 12 52 478 125 553 2.39e-133 397
MS.gene21126.t1 MTR_4g087980 48.624 436 208 7 51 478 89 516 8.62e-133 394
MS.gene21126.t1 MTR_2g044880 45.538 437 223 8 51 478 95 525 7.03e-130 387
MS.gene21126.t1 MTR_4g087970 45.270 444 227 7 45 478 80 517 4.96e-128 382
MS.gene21126.t1 MTR_3g091380 45.238 462 218 11 46 478 142 597 1.19e-127 384
MS.gene21126.t1 MTR_8g023310 46.491 456 211 10 51 478 139 589 7.11e-127 381
MS.gene21126.t1 MTR_4g025670 45.161 434 220 7 51 478 68 489 3.63e-126 376
MS.gene21126.t1 MTR_8g104580 42.008 488 219 10 12 478 56 500 5.70e-123 368
MS.gene21126.t1 MTR_1g008140 43.683 467 225 11 46 478 145 607 1.83e-121 368
MS.gene21126.t1 MTR_7g112580 44.072 447 218 9 51 478 109 542 4.70e-121 365
MS.gene21126.t1 MTR_7g108900 42.644 469 222 10 51 478 98 560 4.58e-120 363
MS.gene21126.t1 MTR_8g042900 45.023 442 219 9 51 478 150 581 1.38e-118 360
MS.gene21126.t1 MTR_4g124520 43.091 427 225 9 61 478 104 521 3.16e-118 357
MS.gene21126.t1 MTR_2g044810 40.756 476 248 12 18 478 78 534 8.19e-118 356
MS.gene21126.t1 MTR_1g083520 44.921 443 228 9 48 478 90 528 1.15e-117 355
MS.gene21126.t1 MTR_3g010780 42.355 484 249 11 15 478 101 574 1.24e-116 354
MS.gene21126.t1 MTR_1g054880 42.918 466 222 12 51 478 99 558 1.10e-115 351
MS.gene21126.t1 MTR_8g042910 51.045 335 155 5 149 478 282 612 5.23e-115 352
MS.gene21126.t1 MTR_1g088020 40.434 507 247 13 19 478 57 555 3.65e-114 347
MS.gene21126.t1 MTR_7g108875 39.960 503 254 12 19 478 67 564 2.04e-113 346
MS.gene21126.t1 MTR_7g108890 50.149 335 158 5 149 478 232 562 2.58e-110 338
MS.gene21126.t1 MTR_3g010770 50.898 334 155 6 150 478 246 575 3.25e-110 338
MS.gene21126.t1 MTR_1g088225 39.842 507 248 14 19 478 57 553 2.60e-108 332
MS.gene21126.t1 MTR_0458s0030 52.843 299 122 4 195 478 20 314 1.15e-106 320
MS.gene21126.t1 MTR_1g088040 52.843 299 122 4 195 478 20 314 1.15e-106 320
MS.gene21126.t1 MTR_8g023150 40.619 485 259 10 15 478 106 582 2.65e-105 325
MS.gene21126.t1 MTR_4g124550 39.570 465 244 8 41 478 139 593 2.65e-105 326
MS.gene21126.t1 MTR_0618s0020 61.304 230 86 2 249 478 2 228 1.36e-101 303
MS.gene21126.t1 MTR_1g083470 37.613 444 251 8 52 474 128 566 7.10e-99 309
MS.gene21126.t1 MTR_1g083500 37.613 444 251 8 52 474 128 566 7.10e-99 309
MS.gene21126.t1 MTR_4g005170 38.202 445 247 9 52 474 133 571 4.87e-97 305
MS.gene21126.t1 MTR_1g083510 37.768 466 243 13 52 477 124 582 1.95e-96 303
MS.gene21126.t1 MTR_1g083490 37.753 445 249 9 52 474 133 571 2.47e-96 302
MS.gene21126.t1 MTR_1g086210 37.448 478 280 12 7 478 105 569 3.05e-96 301
MS.gene21126.t1 MTR_4g005180 36.831 467 266 10 30 474 94 553 1.86e-95 300
MS.gene21126.t1 MTR_4g120290 35.654 474 273 8 27 477 107 571 6.41e-93 293
MS.gene21126.t1 MTR_4g120280 34.702 487 272 7 13 477 109 571 4.15e-92 291
MS.gene21126.t1 MTR_7g112590 36.253 491 262 13 23 477 107 582 1.54e-91 290
MS.gene21126.t1 MTR_1g086190 38.445 476 257 12 30 478 97 563 1.81e-91 289
MS.gene21126.t1 MTR_2g044810 51.953 256 119 3 223 478 214 465 2.71e-91 285
MS.gene21126.t1 MTR_2g436040 38.480 408 231 9 81 475 143 543 1.66e-90 288
MS.gene21126.t1 MTR_3g095920 37.687 467 243 13 31 461 95 549 7.00e-90 285
MS.gene21126.t1 MTR_2g044660 46.519 316 160 5 163 478 326 632 2.69e-89 285
MS.gene21126.t1 MTR_8g088610 42.442 344 191 4 133 475 36 373 3.43e-89 277
MS.gene21126.t1 MTR_7g110440 35.805 472 281 9 17 478 115 574 1.90e-87 279
MS.gene21126.t1 MTR_7g110490 35.760 467 258 10 46 473 106 569 2.43e-87 278
MS.gene21126.t1 MTR_7g110510 35.760 467 258 10 46 473 106 569 2.43e-87 278
MS.gene21126.t1 MTR_8g093460 38.938 452 236 14 22 443 84 525 7.87e-87 277
MS.gene21126.t1 MTR_2g436050 36.993 419 233 9 81 477 154 563 2.55e-83 268
MS.gene21126.t1 MTR_5g083620 39.385 358 203 8 127 478 7 356 2.29e-80 254
MS.gene21126.t1 MTR_7g110420 38.378 370 207 6 129 478 218 586 5.99e-76 249
MS.gene21126.t1 MTR_7g110560 33.471 484 283 9 2 478 98 549 8.92e-75 245
MS.gene21126.t1 MTR_2g105560 40.694 317 170 6 163 478 40 339 4.36e-74 237
MS.gene21126.t1 MTR_7g107180 40.506 316 172 7 164 478 7 307 4.62e-71 228
MS.gene21126.t1 MTR_7g110430 31.356 472 248 11 46 478 106 540 1.84e-65 220
MS.gene21126.t1 MTR_7g111560 32.960 446 271 14 49 478 123 556 3.10e-60 207
MS.gene21126.t1 MTR_2g039530 39.159 309 171 7 137 443 26 319 2.03e-57 194
MS.gene21126.t1 MTR_6g012800 32.523 329 192 9 162 476 4 316 1.11e-55 188
MS.gene21126.t1 MTR_0458s0010 30.572 507 260 17 19 478 57 518 4.82e-54 189
MS.gene21126.t1 MTR_6g088810 37.124 299 162 8 152 438 69 353 4.95e-53 183
MS.gene21126.t1 MTR_8g102380 36.482 307 162 10 146 438 66 353 1.05e-51 179
MS.gene21126.t1 MTR_6g024165 36.422 313 169 10 166 468 43 335 1.62e-50 175
MS.gene21126.t1 MTR_7g011530 33.121 314 183 7 166 468 8 305 7.43e-50 173
MS.gene21126.t1 MTR_1g086540 35.890 326 180 9 154 469 40 346 1.10e-49 173
MS.gene21126.t1 MTR_7g102600 31.579 342 200 10 105 438 54 369 1.34e-46 166
MS.gene21126.t1 MTR_8g102380 35.587 281 149 9 146 412 66 328 7.30e-44 157
MS.gene21126.t1 MTR_6g042660 33.808 281 159 9 164 438 37 296 6.04e-43 155
MS.gene21126.t1 MTR_5g095490 35.231 281 156 8 170 438 67 333 2.22e-42 154
MS.gene21126.t1 MTR_5g083590 31.861 317 161 6 163 478 6 268 2.38e-42 151
MS.gene21126.t1 MTR_5g093970 33.333 306 187 6 164 469 43 331 3.26e-42 153
MS.gene21126.t1 MTR_7g092780 33.333 285 169 6 164 438 90 363 7.96e-41 150
MS.gene21126.t1 MTR_1g033050 33.333 288 168 7 159 438 13 284 1.70e-40 148
MS.gene21126.t1 MTR_4g124740 31.481 324 187 10 147 461 38 335 5.87e-40 147
MS.gene21126.t1 MTR_5g012600 31.119 286 173 7 164 438 63 335 2.64e-39 146
MS.gene21126.t1 MTR_6g042690 33.099 284 162 8 164 438 39 303 1.50e-37 140
MS.gene21126.t1 MTR_5g088300 32.727 275 166 6 164 438 37 292 4.97e-37 139
MS.gene21126.t1 MTR_5g088280 31.900 279 171 6 160 438 35 294 2.17e-35 134
MS.gene21126.t1 MTR_2g033970 29.483 329 201 9 150 467 42 350 3.70e-35 134
MS.gene21126.t1 MTR_2g073390 30.519 308 184 8 145 436 42 335 1.34e-34 133
MS.gene21126.t1 MTR_4g074290 29.712 313 192 7 138 435 35 334 2.66e-34 132
MS.gene21126.t1 MTR_5g088290 31.636 275 170 5 164 438 48 304 1.16e-33 130
MS.gene21126.t1 MTR_4g051810 31.636 275 169 5 164 438 37 292 6.39e-33 127
MS.gene21126.t1 MTR_0009s0350 30.195 308 185 8 144 435 41 334 9.26e-33 128
MS.gene21126.t1 MTR_0009s0340 30.195 308 185 8 144 435 41 334 9.26e-33 128
MS.gene21126.t1 MTR_2g436600 27.879 330 196 11 150 467 41 340 1.01e-28 116
MS.gene21126.t1 MTR_8g036225 29.577 284 173 8 164 438 33 298 1.48e-28 115
MS.gene21126.t1 MTR_6g025590 37.126 167 96 5 166 324 51 216 4.38e-25 103
MS.gene21126.t1 MTR_0408s0030 41.414 99 48 2 340 438 35 123 3.89e-18 81.6
MS.gene21126.t1 MTR_4g130790 32.143 196 117 6 162 346 20 210 8.84e-18 83.6
MS.gene21126.t1 MTR_2g436070 32.184 174 94 5 81 236 154 321 2.57e-15 77.8
MS.gene21126.t1 MTR_6g024200 37.008 127 66 4 341 467 164 276 4.55e-14 72.8
MS.gene21126.t1 MTR_7g102570 32.174 115 65 3 324 436 3 106 1.39e-11 62.0
MS.gene21126.t1 MTR_7g102580 40.698 86 41 3 239 319 73 153 2.11e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene21126.t1 AT5G51490 56.485 478 191 8 12 478 65 536 0.0 554
MS.gene21126.t1 AT3G47400 56.315 483 196 7 8 478 115 594 0.0 546
MS.gene21126.t1 AT5G51500 55.372 484 202 9 5 478 61 540 0.0 545
MS.gene21126.t1 AT2G45220 50.837 478 217 11 2 478 51 511 9.56e-160 462
MS.gene21126.t1 AT4G00190 45.148 474 237 10 7 478 22 474 1.73e-133 394
MS.gene21126.t1 AT1G11580 46.567 466 232 8 22 478 100 557 2.38e-133 397
MS.gene21126.t1 AT1G11580 46.567 466 232 8 22 478 121 578 5.26e-133 397
MS.gene21126.t1 AT1G23200 43.564 505 228 11 13 478 68 554 3.26e-131 391
MS.gene21126.t1 AT5G53370 46.256 454 217 8 46 478 138 585 6.13e-130 389
MS.gene21126.t1 AT5G53370 46.256 454 217 8 46 478 174 621 2.32e-129 389
MS.gene21126.t1 AT3G60730 42.169 498 241 9 15 478 35 519 5.19e-128 382
MS.gene21126.t1 AT3G14310 45.378 476 212 9 45 478 123 592 9.43e-126 379
MS.gene21126.t1 AT4G02320 45.333 450 213 9 51 478 80 518 1.24e-125 375
MS.gene21126.t1 AT1G53830 45.671 462 211 9 51 478 132 587 6.37e-124 374
MS.gene21126.t1 AT4G02300 44.470 443 225 9 51 478 96 532 7.32e-124 372
MS.gene21126.t1 AT3G43270 44.420 448 224 8 51 478 83 525 1.57e-123 370
MS.gene21126.t1 AT3G59010 44.444 477 231 9 18 478 70 528 6.61e-123 369
MS.gene21126.t1 AT4G33220 43.137 459 224 8 51 478 71 523 2.93e-122 367
MS.gene21126.t1 AT4G33220 51.149 348 165 4 131 478 60 402 6.63e-121 359
MS.gene21126.t1 AT3G49220 43.833 454 226 9 46 478 151 596 7.61e-120 363
MS.gene21126.t1 AT3G49220 43.833 454 226 9 46 478 196 641 2.31e-119 363
MS.gene21126.t1 AT5G04960 42.589 479 245 11 15 476 97 562 3.07e-119 361
MS.gene21126.t1 AT5G20860 44.118 442 227 10 47 478 107 538 3.67e-119 360
MS.gene21126.t1 AT4G02330 40.077 519 253 14 10 478 61 571 5.64e-119 360
MS.gene21126.t1 AT2G43050 44.725 436 214 8 51 478 100 516 2.63e-118 357
MS.gene21126.t1 AT1G02810 40.246 487 228 9 51 478 95 577 1.42e-116 354
MS.gene21126.t1 AT2G47550 52.819 337 150 5 147 478 226 558 1.00e-115 352
MS.gene21126.t1 AT3G05620 45.455 407 198 9 81 478 150 541 1.59e-114 348
MS.gene21126.t1 AT2G26450 39.085 481 272 8 7 478 143 611 2.71e-114 350
MS.gene21126.t1 AT2G26440 40.202 495 255 11 11 478 67 547 1.13e-113 346
MS.gene21126.t1 AT5G49180 41.102 472 249 10 27 474 100 566 5.60e-113 345
MS.gene21126.t1 AT3G10710 42.472 445 219 9 52 478 136 561 2.95e-112 343
MS.gene21126.t1 AT4G33230 41.827 416 219 7 81 478 196 606 3.66e-110 339
MS.gene21126.t1 AT5G27870 39.085 481 269 10 17 478 87 562 1.25e-109 341
MS.gene21126.t1 AT3G05610 39.669 484 264 10 17 478 88 565 1.43e-109 339
MS.gene21126.t1 AT3G27980 44.527 402 205 9 84 478 107 497 9.91e-108 329
MS.gene21126.t1 AT1G11590 43.415 410 214 9 78 478 124 524 2.63e-106 326
MS.gene21126.t1 AT4G03930 39.872 469 243 11 19 478 86 524 5.59e-106 325
MS.gene21126.t1 AT3G06830 37.882 491 269 12 17 476 81 566 8.06e-106 326
MS.gene21126.t1 AT3G10720 50.473 317 151 4 164 478 303 615 2.84e-104 324
MS.gene21126.t1 AT5G04970 36.719 512 273 10 13 478 114 620 6.52e-100 313
MS.gene21126.t1 AT5G20860 40.573 419 203 8 47 455 107 489 9.84e-99 306
MS.gene21126.t1 AT1G53840 37.247 494 260 13 15 472 102 581 1.99e-97 305
MS.gene21126.t1 AT3G10720 54.373 263 116 3 216 478 1 259 2.21e-97 294
MS.gene21126.t1 AT3G14300 37.500 480 259 9 5 461 492 953 4.91e-95 308
MS.gene21126.t1 AT4G15980 42.192 365 201 7 117 476 341 700 7.40e-92 294
MS.gene21126.t1 AT4G15980 42.192 365 201 7 117 476 351 710 1.24e-91 293
MS.gene21126.t1 AT5G09760 48.495 299 140 5 158 443 235 532 5.91e-86 274
MS.gene21126.t1 AT5G09760 48.495 299 140 5 158 443 261 558 1.38e-85 274
MS.gene21126.t1 AT1G11370 49.393 247 124 1 161 407 43 288 9.68e-83 258
MS.gene21126.t1 AT5G64640 38.534 423 221 12 56 443 165 583 4.30e-81 263
MS.gene21126.t1 AT2G47030 39.276 359 196 8 135 478 237 588 1.05e-73 243
MS.gene21126.t1 AT2G47040 38.483 356 200 8 135 478 247 595 4.76e-72 239
MS.gene21126.t1 AT3G62170 31.673 502 288 13 8 478 111 588 5.77e-69 231
MS.gene21126.t1 AT3G29090 33.684 285 162 6 166 438 9 278 3.08e-49 171
MS.gene21126.t1 AT5G19730 31.940 335 186 9 127 438 42 357 8.17e-49 172
MS.gene21126.t1 AT2G21610 34.672 274 160 6 166 438 53 308 8.58e-49 171
MS.gene21126.t1 AT2G36710 33.333 321 189 9 161 472 86 390 9.71e-49 172
MS.gene21126.t1 AT2G21610 34.672 274 160 6 166 438 58 313 1.09e-48 171
MS.gene21126.t1 AT2G36700 33.981 309 182 8 164 467 42 333 2.14e-48 169
MS.gene21126.t1 AT1G05310 34.386 285 166 6 164 438 91 364 1.96e-44 160
MS.gene21126.t1 AT3G17060 31.193 327 192 9 153 467 35 340 1.62e-41 151
MS.gene21126.t1 AT5G07430 29.805 359 215 11 123 467 20 355 1.69e-39 146
MS.gene21126.t1 AT1G44980 41.799 189 106 3 143 328 54 241 3.89e-39 142
MS.gene21126.t1 AT5G47500 31.469 286 172 7 164 438 61 333 6.77e-39 145
MS.gene21126.t1 AT5G55590 34.364 291 165 8 160 438 78 354 3.39e-37 140
MS.gene21126.t1 AT5G55590 34.866 261 145 7 160 408 78 325 9.52e-37 138
MS.gene21126.t1 AT3G24130 31.119 286 171 7 164 438 34 304 1.16e-36 138
MS.gene21126.t1 AT5G07420 29.499 339 206 10 138 461 31 351 1.80e-35 135
MS.gene21126.t1 AT5G18990 29.568 301 175 9 153 438 21 299 5.12e-33 128
MS.gene21126.t1 AT5G26810 29.252 294 170 8 164 438 34 308 1.24e-31 124
MS.gene21126.t1 AT5G61680 28.902 346 208 12 139 467 34 358 1.61e-31 124
MS.gene21126.t1 AT2G19150 28.041 296 180 8 156 438 33 308 6.58e-30 119
MS.gene21126.t1 AT5G07410 29.126 309 188 11 145 438 39 331 1.24e-29 119
MS.gene21126.t1 AT1G69940 28.614 332 203 12 145 461 39 351 2.86e-29 118
MS.gene21126.t1 AT2G19150 28.195 266 159 7 156 408 33 279 2.68e-27 111
MS.gene21126.t1 AT2G47280 26.370 292 183 8 160 438 31 303 5.63e-26 108
MS.gene21126.t1 AT3G49220 29.730 222 130 7 46 246 196 412 7.92e-22 97.8

Find 95 sgRNAs with CRISPR-Local

Find 146 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTCCACAATTGTCAAATT+AGG 0.096980 1.4:-67867996 MS.gene21126:CDS
GCTCAAGACACATTGTATTA+TGG 0.160933 1.4:-67867823 MS.gene21126:CDS
TCATGCATTGAAAACCAATT+TGG 0.214818 1.4:+67869147 None:intergenic
CTTCTACCGGTGTGCTATAT+CGG 0.231966 1.4:-67868220 MS.gene21126:CDS
ACTTCTAGAACTTGTTATTA+TGG 0.232263 1.4:+67868900 None:intergenic
ACGGTTGCTGGACTCCTTGC+TGG 0.264051 1.4:-67867703 MS.gene21126:CDS
TGTGAGGACCAGCAGTATTT+TGG 0.265892 1.4:+67868286 None:intergenic
ATTCCACAATTGTCAAATTA+GGG 0.271376 1.4:-67867995 MS.gene21126:CDS
AAGAAGGGTCATTTCCAAAT+TGG 0.272902 1.4:-67869161 MS.gene21126:CDS
TGATAAGTACAAAACCTTCT+TGG 0.297993 1.4:-67867947 MS.gene21126:CDS
GCATCAAAGTTTACGGTTGC+TGG 0.302438 1.4:-67867715 MS.gene21126:CDS
GGAATGAAATTCCAGTGTTT+TGG 0.313831 1.4:+67868013 None:intergenic
GTAAACTTTGATGCTTCATT+TGG 0.314281 1.4:+67867724 None:intergenic
CTCAAGACACATTGTATTAT+GGG 0.319930 1.4:-67867822 MS.gene21126:CDS
TCAAACATAGAGTTGAATTC+AGG 0.324256 1.4:-67869977 MS.gene21126:CDS
GATCAAAGACCAGATGTAAA+TGG 0.333623 1.4:+67867646 None:intergenic
AAATGAAGCATCAAAGTTTA+CGG 0.334310 1.4:-67867722 MS.gene21126:CDS
TATGGGGAGTATGAGAATTA+TGG 0.345818 1.4:-67867805 MS.gene21126:CDS
TTTCAAGAAATGCATATTGA+TGG 0.359546 1.4:+67869623 None:intergenic
GGCACCGTAGACTTCATCTT+TGG 0.365133 1.4:-67868135 MS.gene21126:CDS
CATCTCAACCGTACACTTGA+AGG 0.367169 1.4:-67869813 MS.gene21126:CDS
GATAAGTACAAAACCTTCTT+GGG 0.374659 1.4:-67867946 MS.gene21126:CDS
TACCGACAATGCTTCATCTA+TGG 0.380171 1.4:-67868156 MS.gene21126:CDS
CAACAGCAAACAGAGTAAAA+TGG 0.386732 1.4:-67867771 MS.gene21126:CDS
TAAACTTTGATGCTTCATTT+GGG 0.423452 1.4:+67867725 None:intergenic
GAATGGGTCACCACGACCTT+GGG 0.437136 1.4:+67868035 None:intergenic
CCAATGTTATTGAGATGATA+AGG 0.438431 1.4:-67869656 MS.gene21126:CDS
TCCGTGCATAAAACGGTTCA+TGG 0.440471 1.4:-67869870 MS.gene21126:CDS
AGCCATGTTTGTACATCATT+TGG 0.450556 1.4:+67869762 None:intergenic
TTCTACCGGTGTGCTATATC+GGG 0.452629 1.4:-67868219 MS.gene21126:CDS
AATCTTGTGGTGGCAAAAGA+TGG 0.472687 1.4:-67869087 MS.gene21126:CDS
GCTGGACTCCTTGCTGGACC+AGG 0.473004 1.4:-67867697 MS.gene21126:CDS
CAGCCCTAATTTGACAATTG+TGG 0.474354 1.4:+67867992 None:intergenic
CTAGCCAACCATGTTGGTCC+TGG 0.475877 1.4:+67867679 None:intergenic
GGAATGGGTCACCACGACCT+TGG 0.485955 1.4:+67868034 None:intergenic
GGGCAGTGATCATGTTAGCT+TGG 0.487370 1.4:+67868055 None:intergenic
ACAAGTTCTAGAAGTGTTCA+AGG 0.492055 1.4:-67868892 MS.gene21126:CDS
TGCCATAGATGAAGCATTGT+CGG 0.497633 1.4:+67868154 None:intergenic
CAGATCTCTCTGTCTTCTAC+CGG 0.498986 1.4:-67868233 MS.gene21126:CDS
TTTGTGATACATGTTAAGAA+AGG 0.500212 1.4:-67868997 MS.gene21126:CDS
AAACTCATCCGTGCATAAAA+CGG 0.500247 1.4:-67869877 MS.gene21126:CDS
CAAACATAGAGTTGAATTCA+GGG 0.504754 1.4:-67869976 MS.gene21126:CDS
ACTACTGTGCCATTTACATC+TGG 0.505247 1.4:-67867655 MS.gene21126:CDS
CCTTATCATCTCAATAACAT+TGG 0.506543 1.4:+67869656 None:intergenic
CTGTTTGCTGTTGATGAACC+AGG 0.509095 1.4:+67867781 None:intergenic
AATGACAACATTATGCTGAT+TGG 0.509190 1.4:-67868940 MS.gene21126:CDS
AATATCGAAACATGTAAAAG+TGG 0.509586 1.4:-67869723 MS.gene21126:CDS
TTCAGTAAAGTTCAATCTTG+TGG 0.510785 1.4:-67869100 MS.gene21126:CDS
TATTTAAGCCTTCAAGTGTA+CGG 0.516272 1.4:+67869805 None:intergenic
ACTCTTGAGTATTGTTGCCA+TGG 0.524355 1.4:+67867919 None:intergenic
TTGCCATGGCCTGCCCAAGA+AGG 0.533733 1.4:+67867933 None:intergenic
CAGAGAGATCTGAGGCTGAT+CGG 0.534495 1.4:+67868244 None:intergenic
ATGATCACTGCCCAAGGTCG+TGG 0.537091 1.4:-67868045 MS.gene21126:CDS
ACCCCATGGAGACCAACCTA+GGG 0.538985 1.4:+67867858 None:intergenic
TGCTGTTGCAGAGCTATAAG+TGG 0.543731 1.4:+67868861 None:intergenic
CACCCCATGGAGACCAACCT+AGG 0.550196 1.4:+67867857 None:intergenic
GTGGTGGCAAAAGATGGTTC+TGG 0.550327 1.4:-67869081 MS.gene21126:CDS
TTTGCAAGAAAGCCTTTGGA+TGG 0.551261 1.4:-67868078 MS.gene21126:CDS
AAACCTTCTTGGGCAGGCCA+TGG 0.552962 1.4:-67867936 MS.gene21126:CDS
AGTACAAAACCTTCTTGGGC+AGG 0.555197 1.4:-67867942 MS.gene21126:CDS
ACTTATAGCTCTGCAACAGC+AGG 0.557059 1.4:-67868859 MS.gene21126:intron
TCACTTGCAGAAACAGAAGA+AGG 0.559810 1.4:-67869177 MS.gene21126:intron
ATAACCTTCCAAAATACTGC+TGG 0.563934 1.4:-67868294 MS.gene21126:CDS
CATCTTTGGCAACGCTGCAG+TGG 0.565515 1.4:-67868121 MS.gene21126:CDS
GCAAACAGAGTAAAATGGCC+TGG 0.569026 1.4:-67867766 MS.gene21126:CDS
GCAAAATCAGCGTCACCCCA+TGG 0.571275 1.4:+67867844 None:intergenic
AACATTATGCTGATTGGTGA+CGG 0.581662 1.4:-67868934 MS.gene21126:CDS
ATGTTAGCTTGGCCATCCAA+AGG 0.583281 1.4:+67868066 None:intergenic
CACCAAATGATGTACAAACA+TGG 0.597110 1.4:-67869764 MS.gene21126:CDS
CTAAGAGAAAATATAAGACA+AGG 0.604478 1.4:-67869020 MS.gene21126:CDS
TTTGTTATCACATGATAACC+AGG 0.611404 1.4:+67867748 None:intergenic
GGTGACCCATTCCAAAACAC+TGG 0.613436 1.4:-67868024 MS.gene21126:CDS
AGTAAAGTTCAATCTTGTGG+TGG 0.619446 1.4:-67869097 MS.gene21126:CDS
GTTGCCAAAGATGAAGTCTA+CGG 0.622853 1.4:+67868131 None:intergenic
CACTTGCAGAAACAGAAGAA+GGG 0.623150 1.4:-67869176 MS.gene21126:intron
TCAAGACACATTGTATTATG+GGG 0.625024 1.4:-67867821 MS.gene21126:CDS
GCCACAGCTTGACCTTTGTG+AGG 0.625981 1.4:+67868270 None:intergenic
GGGCTATCAAGACACTCTGA+TGG 0.632395 1.4:-67868199 MS.gene21126:CDS
TGTTTATAAAGAGAACATTG+AGG 0.635754 1.4:-67868974 MS.gene21126:CDS
GTAGAAGACAGAGAGATCTG+AGG 0.638257 1.4:+67868236 None:intergenic
TGGACCAGGACCAACATGGT+TGG 0.641558 1.4:-67867683 MS.gene21126:CDS
AATACTGCTGGTCCTCACAA+AGG 0.646774 1.4:-67868282 MS.gene21126:CDS
GCAACAATACTCAAGAGTCA+TGG 0.646964 1.4:-67867914 MS.gene21126:CDS
CCCCTAGGTTGGTCTCCATG+GGG 0.648245 1.4:-67867859 MS.gene21126:CDS
ATGTTGGTCCTGGTCCAGCA+AGG 0.649112 1.4:+67867689 None:intergenic
TTGCTGGACCAGGACCAACA+TGG 0.651224 1.4:-67867687 MS.gene21126:CDS
TCCTCACAAAGGTCAAGCTG+TGG 0.651499 1.4:-67868271 MS.gene21126:CDS
GCTAACATGATCACTGCCCA+AGG 0.651878 1.4:-67868051 MS.gene21126:CDS
CATTTCTTGAAACATAACAA+AGG 0.664591 1.4:-67869612 MS.gene21126:intron
GAGTATGAGAATTATGGACC+TGG 0.666021 1.4:-67867799 MS.gene21126:CDS
GTAGTGCTAGCCAACCATGT+TGG 0.672951 1.4:+67867673 None:intergenic
CCCCATGGAGACCAACCTAG+GGG 0.685055 1.4:+67867859 None:intergenic
CCCATGGAGACCAACCTAGG+GGG 0.713906 1.4:+67867860 None:intergenic
AGTTCTAGAAGTGTTCAAGG+TGG 0.726357 1.4:-67868889 MS.gene21126:CDS
GATAGCCCGATATAGCACAC+CGG 0.756970 1.4:+67868214 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATAACAATACATATTTATA+TGG + chr1.4:67868411-67868430 None:intergenic 10.0%
!!! ATTGAATAACTTTATTTATA+AGG - chr1.4:67868116-67868135 MS.gene21126:CDS 10.0%
!! ATAAATTATCGAATGTTAAT+AGG - chr1.4:67868198-67868217 MS.gene21126:CDS 15.0%
!! ATTATCATTAACTGATAATT+TGG + chr1.4:67868350-67868369 None:intergenic 15.0%
!! TAAATTATCGAATGTTAATA+GGG - chr1.4:67868199-67868218 MS.gene21126:CDS 15.0%
!! TAAATTATCGAATGTTTATT+TGG - chr1.4:67868161-67868180 MS.gene21126:CDS 15.0%
!! TATGTATTGTTATAACTTAT+TGG - chr1.4:67868417-67868436 MS.gene21126:intron 15.0%
!!! AGTTATTCAATAATTTTTAG+CGG + chr1.4:67868107-67868126 None:intergenic 15.0%
!!! GTATATATCTTCAATTTTTT+AGG - chr1.4:67868298-67868317 MS.gene21126:CDS 15.0%
!!! TTTAAACACTGATTTAATTA+GGG + chr1.4:67869094-67869113 None:intergenic 15.0%
!!! TTTTAAACACTGATTTAATT+AGG + chr1.4:67869095-67869114 None:intergenic 15.0%
!! GGAAAAAAAAGTTGTAAAAT+AGG - chr1.4:67868235-67868254 MS.gene21126:CDS 20.0%
!! TATTTATAAGGAATGAAATG+CGG - chr1.4:67868128-67868147 MS.gene21126:CDS 20.0%
!! TTATAACAAGAACATAAAAC+AGG + chr1.4:67868828-67868847 None:intergenic 20.0%
!!! TTGCAAAAATGTTACAATTT+TGG + chr1.4:67869553-67869572 None:intergenic 20.0%
! AATATCGAAACATGTAAAAG+TGG - chr1.4:67867921-67867940 MS.gene21126:CDS 25.0%
! ATTCCACAATTGTCAAATTA+GGG - chr1.4:67869649-67869668 MS.gene21126:CDS 25.0%
! ATTTATAAGGAATGAAATGC+GGG - chr1.4:67868129-67868148 MS.gene21126:CDS 25.0%
! CATTTCTTGAAACATAACAA+AGG - chr1.4:67868032-67868051 MS.gene21126:CDS 25.0%
! CTAAATCAGTGAAGAAAATT+TGG + chr1.4:67868944-67868963 None:intergenic 25.0%
! CTAAGAGAAAATATAAGACA+AGG - chr1.4:67868624-67868643 MS.gene21126:intron 25.0%
! TAAACTTTGATGCTTCATTT+GGG + chr1.4:67869922-67869941 None:intergenic 25.0%
! TGTTTATAAAGAGAACATTG+AGG - chr1.4:67868670-67868689 MS.gene21126:intron 25.0%
! TTTCAAGAAATGCATATTGA+TGG + chr1.4:67868024-67868043 None:intergenic 25.0%
! TTTGTGATACATGTTAAGAA+AGG - chr1.4:67868647-67868666 MS.gene21126:intron 25.0%
!! AAATGAAGCATCAAAGTTTA+CGG - chr1.4:67869922-67869941 MS.gene21126:CDS 25.0%
!! CATCTTTTATGTTCAATAGT+AGG + chr1.4:67869007-67869026 None:intergenic 25.0%
!!! ACTTCTAGAACTTGTTATTA+TGG + chr1.4:67868747-67868766 None:intergenic 25.0%
!!! TCACTGATTTAGTTTTTTCT+AGG - chr1.4:67868952-67868971 MS.gene21126:CDS 25.0%
AATGACAACATTATGCTGAT+TGG - chr1.4:67868704-67868723 MS.gene21126:intron 30.0%
CAAACATAGAGTTGAATTCA+GGG - chr1.4:67867668-67867687 MS.gene21126:CDS 30.0%
CATTCCACAATTGTCAAATT+AGG - chr1.4:67869648-67869667 MS.gene21126:CDS 30.0%
CCAATGTTATTGAGATGATA+AGG - chr1.4:67867988-67868007 MS.gene21126:CDS 30.0%
CCTTATCATCTCAATAACAT+TGG + chr1.4:67867991-67868010 None:intergenic 30.0%
CTATAAATCACAATCGTTGT+TGG + chr1.4:67869256-67869275 None:intergenic 30.0%
CTCAAGACACATTGTATTAT+GGG - chr1.4:67869822-67869841 MS.gene21126:CDS 30.0%
GATAAGTACAAAACCTTCTT+GGG - chr1.4:67869698-67869717 MS.gene21126:CDS 30.0%
GTAAACTTTGATGCTTCATT+TGG + chr1.4:67869923-67869942 None:intergenic 30.0%
TATTTAAGCCTTCAAGTGTA+CGG + chr1.4:67867842-67867861 None:intergenic 30.0%
TCAAACATAGAGTTGAATTC+AGG - chr1.4:67867667-67867686 MS.gene21126:CDS 30.0%
TCAAGACACATTGTATTATG+GGG - chr1.4:67869823-67869842 MS.gene21126:CDS 30.0%
TCATGCATTGAAAACCAATT+TGG + chr1.4:67868500-67868519 None:intergenic 30.0%
TGATAAGTACAAAACCTTCT+TGG - chr1.4:67869697-67869716 MS.gene21126:CDS 30.0%
TGATATTCATAGTCGTCTAA+TGG - chr1.4:67869158-67869177 MS.gene21126:CDS 30.0%
TTCAGTAAAGTTCAATCTTG+TGG - chr1.4:67868544-67868563 MS.gene21126:intron 30.0%
TTCTTGCAACTTATATAGCA+AGG - chr1.4:67869183-67869202 MS.gene21126:intron 30.0%
! CTCTTGAATCTTTTAAATCC+AGG - chr1.4:67869296-67869315 MS.gene21126:intron 30.0%
! GTGTTTAAAATTAGTTGCCA+CGG - chr1.4:67869105-67869124 MS.gene21126:CDS 30.0%
! GTTTTGTACTTATCAACAAC+AGG + chr1.4:67869692-67869711 None:intergenic 30.0%
! TTTGTTATCACATGATAACC+AGG + chr1.4:67869899-67869918 None:intergenic 30.0%
!! CATGGTGATGAAAACTTTTA+TGG - chr1.4:67869748-67869767 MS.gene21126:CDS 30.0%
!!! AAATTCCAGTGTTTTGGAAT+GGG + chr1.4:67869628-67869647 None:intergenic 30.0%
!!! ATTGGTTTTCAATGCATGAA+AGG - chr1.4:67868501-67868520 MS.gene21126:intron 30.0%
AAAATTAGTTGCCACGGAAA+TGG - chr1.4:67869111-67869130 MS.gene21126:CDS 35.0%
AAACTCATCCGTGCATAAAA+CGG - chr1.4:67867767-67867786 MS.gene21126:CDS 35.0%
AAGAAGGGTCATTTCCAAAT+TGG - chr1.4:67868483-67868502 MS.gene21126:intron 35.0%
AGCCATGTTTGTACATCATT+TGG + chr1.4:67867885-67867904 None:intergenic 35.0%
AGTAAAGTTCAATCTTGTGG+TGG - chr1.4:67868547-67868566 MS.gene21126:intron 35.0%
ATAACCTTCCAAAATACTGC+TGG - chr1.4:67869350-67869369 MS.gene21126:intron 35.0%
CAACAGCAAACAGAGTAAAA+TGG - chr1.4:67869873-67869892 MS.gene21126:CDS 35.0%
CACCAAATGATGTACAAACA+TGG - chr1.4:67867880-67867899 MS.gene21126:CDS 35.0%
GCTCAAGACACATTGTATTA+TGG - chr1.4:67869821-67869840 MS.gene21126:CDS 35.0%
GTCATGCTAATATAAGCTTC+TGG - chr1.4:67868439-67868458 MS.gene21126:intron 35.0%
GTTGAACTAACAACGAAAGT+TGG - chr1.4:67868866-67868885 MS.gene21126:CDS 35.0%
GTTGTAAAATAGGAAGACAC+AGG - chr1.4:67868245-67868264 MS.gene21126:CDS 35.0%
TAATAGGGTTGAACATGAAG+AGG - chr1.4:67868214-67868233 MS.gene21126:CDS 35.0%
! AACATTATGCTGATTGGTGA+CGG - chr1.4:67868710-67868729 MS.gene21126:intron 35.0%
! CATGGTAAGAGCTTCTTTTA+AGG + chr1.4:67867712-67867731 None:intergenic 35.0%
! CATTTTTGCAAGAAAGCCTT+TGG - chr1.4:67869562-67869581 MS.gene21126:intron 35.0%
! GGAATGAAATTCCAGTGTTT+TGG + chr1.4:67869634-67869653 None:intergenic 35.0%
! TATGGGGAGTATGAGAATTA+TGG - chr1.4:67869839-67869858 MS.gene21126:CDS 35.0%
! TTCTTGTGCTTCTTTTTGCA+TGG + chr1.4:67867730-67867749 None:intergenic 35.0%
!! ACAAGTTCTAGAAGTGTTCA+AGG - chr1.4:67868752-67868771 MS.gene21126:intron 35.0%
!!! CTTTTAAATCCAGGCATTGA+TGG - chr1.4:67869305-67869324 MS.gene21126:intron 35.0%
!!! GAAATTCCAGTGTTTTGGAA+TGG + chr1.4:67869629-67869648 None:intergenic 35.0%
AAATGAAGTCCATCAATGCC+TGG + chr1.4:67869317-67869336 None:intergenic 40.0%
AATCTTGTGGTGGCAAAAGA+TGG - chr1.4:67868557-67868576 MS.gene21126:intron 40.0%
AATGGTGCTCTTTATGTCAG+AGG - chr1.4:67869129-67869148 MS.gene21126:CDS 40.0%
CACTTGCAGAAACAGAAGAA+GGG - chr1.4:67868468-67868487 MS.gene21126:intron 40.0%
CAGCCCTAATTTGACAATTG+TGG + chr1.4:67869655-67869674 None:intergenic 40.0%
GAGTATGAGAATTATGGACC+TGG - chr1.4:67869845-67869864 MS.gene21126:CDS 40.0%
GCAACAATACTCAAGAGTCA+TGG - chr1.4:67869730-67869749 MS.gene21126:CDS 40.0%
GTTGCCAAAGATGAAGTCTA+CGG + chr1.4:67869516-67869535 None:intergenic 40.0%
TACCGACAATGCTTCATCTA+TGG - chr1.4:67869488-67869507 MS.gene21126:intron 40.0%
TCACTTGCAGAAACAGAAGA+AGG - chr1.4:67868467-67868486 MS.gene21126:intron 40.0%
TGTTGGACAATGACACATGT+TGG + chr1.4:67869239-67869258 None:intergenic 40.0%
TTTGCAAGAAAGCCTTTGGA+TGG - chr1.4:67869566-67869585 MS.gene21126:intron 40.0%
! ACCATGAACCGTTTTATGCA+CGG + chr1.4:67867778-67867797 None:intergenic 40.0%
! ACTCTTGAGTATTGTTGCCA+TGG + chr1.4:67869728-67869747 None:intergenic 40.0%
!! ACTACTGTGCCATTTACATC+TGG - chr1.4:67869989-67870008 MS.gene21126:CDS 40.0%
!! AGTTCTAGAAGTGTTCAAGG+TGG - chr1.4:67868755-67868774 MS.gene21126:intron 40.0%
!! TGCCATAGATGAAGCATTGT+CGG + chr1.4:67869493-67869512 None:intergenic 40.0%
AATACTGCTGGTCCTCACAA+AGG - chr1.4:67869362-67869381 MS.gene21126:intron 45.0%
AGTACAAAACCTTCTTGGGC+AGG - chr1.4:67869702-67869721 MS.gene21126:CDS 45.0%
CAGATCTCTCTGTCTTCTAC+CGG - chr1.4:67869411-67869430 MS.gene21126:intron 45.0%
CATCTCAACCGTACACTTGA+AGG - chr1.4:67867831-67867850 MS.gene21126:CDS 45.0%
CTTCTACCGGTGTGCTATAT+CGG - chr1.4:67869424-67869443 MS.gene21126:intron 45.0%
GCAAACAGAGTAAAATGGCC+TGG - chr1.4:67869878-67869897 MS.gene21126:CDS 45.0%
GCATCAAAGTTTACGGTTGC+TGG - chr1.4:67869929-67869948 MS.gene21126:CDS 45.0%
GTAGAAGACAGAGAGATCTG+AGG + chr1.4:67869411-67869430 None:intergenic 45.0%
TCCGTGCATAAAACGGTTCA+TGG - chr1.4:67867774-67867793 MS.gene21126:CDS 45.0%
TGCTGTTGCAGAGCTATAAG+TGG + chr1.4:67868786-67868805 None:intergenic 45.0%
TTCTACCGGTGTGCTATATC+GGG - chr1.4:67869425-67869444 MS.gene21126:intron 45.0%
! ACTTATAGCTCTGCAACAGC+AGG - chr1.4:67868785-67868804 MS.gene21126:intron 45.0%
! ATGTTAGCTTGGCCATCCAA+AGG + chr1.4:67869581-67869600 None:intergenic 45.0%
! GCAAGGACGCTTTAGATTGA+AGG - chr1.4:67869200-67869219 MS.gene21126:intron 45.0%
! TGTGAGGACCAGCAGTATTT+TGG + chr1.4:67869361-67869380 None:intergenic 45.0%
!! AGGACCAGCAGTATTTTGGA+AGG + chr1.4:67869357-67869376 None:intergenic 45.0%
!! CATAAAGAGCACCATTTCCG+TGG + chr1.4:67869125-67869144 None:intergenic 45.0%
!! CTGTTTGCTGTTGATGAACC+AGG + chr1.4:67869866-67869885 None:intergenic 45.0%
AAGTTGGCGACTCTAGTAGG+CGG - chr1.4:67868882-67868901 MS.gene21126:CDS 50.0%
CGAAAGTTGGCGACTCTAGT+AGG - chr1.4:67868879-67868898 MS.gene21126:CDS 50.0%
GATAGCCCGATATAGCACAC+CGG + chr1.4:67869433-67869452 None:intergenic 50.0%
GCTAACATGATCACTGCCCA+AGG - chr1.4:67869593-67869612 MS.gene21126:intron 50.0%
GGCACCGTAGACTTCATCTT+TGG - chr1.4:67869509-67869528 MS.gene21126:intron 50.0%
GGGCAGTGATCATGTTAGCT+TGG + chr1.4:67869592-67869611 None:intergenic 50.0%
GGGCTATCAAGACACTCTGA+TGG - chr1.4:67869445-67869464 MS.gene21126:intron 50.0%
GGTGACCCATTCCAAAACAC+TGG - chr1.4:67869620-67869639 MS.gene21126:CDS 50.0%
GTAGTGCTAGCCAACCATGT+TGG + chr1.4:67869974-67869993 None:intergenic 50.0%
GTGGTGGCAAAAGATGGTTC+TGG - chr1.4:67868563-67868582 MS.gene21126:intron 50.0%
TCCTCACAAAGGTCAAGCTG+TGG - chr1.4:67869373-67869392 MS.gene21126:intron 50.0%
! CAGAGAGATCTGAGGCTGAT+CGG + chr1.4:67869403-67869422 None:intergenic 50.0%
AAACCTTCTTGGGCAGGCCA+TGG - chr1.4:67869708-67869727 MS.gene21126:CDS 55.0%
ACCCCATGGAGACCAACCTA+GGG + chr1.4:67869789-67869808 None:intergenic 55.0%
ATGATCACTGCCCAAGGTCG+TGG - chr1.4:67869599-67869618 MS.gene21126:intron 55.0%
ATGTTGGTCCTGGTCCAGCA+AGG + chr1.4:67869958-67869977 None:intergenic 55.0%
CATCTTTGGCAACGCTGCAG+TGG - chr1.4:67869523-67869542 MS.gene21126:intron 55.0%
CTAGCCAACCATGTTGGTCC+TGG + chr1.4:67869968-67869987 None:intergenic 55.0%
CTTTAGTGAGCCCCCTAGGT+TGG - chr1.4:67869774-67869793 MS.gene21126:CDS 55.0%
GAATGGGTCACCACGACCTT+GGG + chr1.4:67869612-67869631 None:intergenic 55.0%
GACACTTTAGTGAGCCCCCT+AGG - chr1.4:67869770-67869789 MS.gene21126:CDS 55.0%
GCAAAATCAGCGTCACCCCA+TGG + chr1.4:67869803-67869822 None:intergenic 55.0%
GCCACAGCTTGACCTTTGTG+AGG + chr1.4:67869377-67869396 None:intergenic 55.0%
TGGACCAGGACCAACATGGT+TGG - chr1.4:67869961-67869980 MS.gene21126:CDS 55.0%
TTGCTGGACCAGGACCAACA+TGG - chr1.4:67869957-67869976 MS.gene21126:CDS 55.0%
ACGGTTGCTGGACTCCTTGC+TGG - chr1.4:67869941-67869960 MS.gene21126:CDS 60.0%
CACCCCATGGAGACCAACCT+AGG + chr1.4:67869790-67869809 None:intergenic 60.0%
CCCATGGAGACCAACCTAGG+GGG + chr1.4:67869787-67869806 None:intergenic 60.0%
CCCCATGGAGACCAACCTAG+GGG + chr1.4:67869788-67869807 None:intergenic 60.0%
GCGACTCTAGTAGGCGGAGA+TGG - chr1.4:67868888-67868907 MS.gene21126:CDS 60.0%
GGAATGGGTCACCACGACCT+TGG + chr1.4:67869613-67869632 None:intergenic 60.0%
TTGCCATGGCCTGCCCAAGA+AGG + chr1.4:67869714-67869733 None:intergenic 60.0%
!! CCCCCTAGGTTGGTCTCCAT+GGG - chr1.4:67869784-67869803 MS.gene21126:CDS 60.0%
!! CCCCTAGGTTGGTCTCCATG+GGG - chr1.4:67869785-67869804 MS.gene21126:CDS 60.0%
GCTGGACTCCTTGCTGGACC+AGG - chr1.4:67869947-67869966 MS.gene21126:CDS 65.0%
!! GCCCCCTAGGTTGGTCTCCA+TGG - chr1.4:67869783-67869802 MS.gene21126:CDS 65.0%


Chromosome Type Strat End Strand Name
chr1.4 gene 67867648 67870018 67867648 ID=MS.gene21126
chr1.4 mRNA 67867648 67870018 67867648 ID=MS.gene21126.t1;Parent=MS.gene21126
chr1.4 exon 67869613 67870018 67869613 ID=MS.gene21126.t1.exon1;Parent=MS.gene21126.t1
chr1.4 CDS 67869613 67870018 67869613 ID=cds.MS.gene21126.t1;Parent=MS.gene21126.t1
chr1.4 exon 67868860 67869189 67868860 ID=MS.gene21126.t1.exon2;Parent=MS.gene21126.t1
chr1.4 CDS 67868860 67869189 67868860 ID=cds.MS.gene21126.t1;Parent=MS.gene21126.t1
chr1.4 exon 67867648 67868348 67867648 ID=MS.gene21126.t1.exon3;Parent=MS.gene21126.t1
chr1.4 CDS 67867648 67868348 67867648 ID=cds.MS.gene21126.t1;Parent=MS.gene21126.t1
Gene Sequence

>MS.gene21126

ATGAACAATCATTTCAAAATCAAACATAGAGTTGAATTCAGGGAAATGCTTGTTCAATTAGCCTTAAAAGAAGCTCTTACCATGCAAAAAGAAGCACAAGAAAATTCTCAACAACAACAAAACTCATCCGTGCATAAAACGGTTCATGGTGATTGTTTGAAGCTATTTGAAATCACAATTTTTCATCTCAACCGTACACTTGAAGGCTTAAATAATGCAAGCAAAAATTGTTCACCAAATGATGTACAAACATGGCTCACAACTTCTCTCACAAATATCGAAACATGTAAAAGTGGAGCTTTAGAACTCAATGCTCAAGATTTCAATTTCATTATGCAAACCAATGTTATTGAGATGATAAGGAACATCTTAGCCATCAATATGCATTTCTTGAAACATAACAAAGGTAATAACAATTCTTTTATATTTTTCTCTTTAAAATATTAAGTATTGTCTCCGCTAAAAATTATTGAATAACTTTATTTATAAGGAATGAAATGCGGGTGTGAAAGATAAATTATCGAATGTTTATTTGGTCACATACATAAAAATAAATTATCGAATGTTAATAGGGTTGAACATGAAGAGGAAAAAAAAGTTGTAAAATAGGAAGACACAGGAGCAATTATATATACTTTGTAGATGTTGAAGTATATATCTTCAATTTTTTAGGTATATAATGATAAAATTTTGTAATCTCCAAATTATCAGTTAATGATAATATTCATGTCATCATAGTACTTATTGCTTATTGTACTTACCATATAAATATGTATTGTTATAACTTATTGGTCATGCTAATATAAGCTTCTGGTTCTGTCACTTGCAGAAACAGAAGAAGGGTCATTTCCAAATTGGTTTTCAATGCATGAAAGGAAGCTATTGCAGTCTAAGTCTTCAGTAAAGTTCAATCTTGTGGTGGCAAAAGATGGTTCTGGACAGTACAAGACTGTGCAAGCTGCTTTAAACGCTGCTGCTAAGAGAAAATATAAGACAAGGTTTGTGATACATGTTAAGAAAGGTGTTTATAAAGAGAACATTGAGGTTTCTGTTCACAATGACAACATTATGCTGATTGGTGACGGAATGCAAAATACCATAATAACAAGTTCTAGAAGTGTTCAAGGTGGTTATACCACTTATAGCTCTGCAACAGCAGGTGAGTTATATTTCATTTCCTGTTTTATGTTCTTGTTATAAGAGTCACTACTAGAAAAAGTTGAACTAACAACGAAAGTTGGCGACTCTAGTAGGCGGAGATGGAATAGTGATGAATTTAATGTTTTTCGTTCTCCAAATTTTCTTCACTGATTTAGTTTTTTCTAGGTGTCTTTGTGTACAAGTAAATTTCATGCACCTACTATTGAACATAAAAGATGTGCGAAAAAAAATTGAGTGAAAATCTACAATCATTAAATGAGCTTTTGAAACTTAATTTTAAAGCCCTAATTAAATCAGTGTTTAAAATTAGTTGCCACGGAAATGGTGCTCTTTATGTCAGAGGTATATATGATATTCATAGTCGTCTAATGGCTTTCTTGCAACTTATATAGCAAGGACGCTTTAGATTGAAGGTGTATTTGTGTATCCAACATGTGTCATTGTCCAACAACGATTGTGATTTATAGTTTCTAATAGTTACATATTTCTCTTGAATCTTTTAAATCCAGGCATTGATGGACTTCATTTCATTGCACGTGACATAACCTTCCAAAATACTGCTGGTCCTCACAAAGGTCAAGCTGTGGCGCTCCGATCAGCCTCAGATCTCTCTGTCTTCTACCGGTGTGCTATATCGGGCTATCAAGACACTCTGATGGCTCATGCACAACGTCAATTCTACCGACAATGCTTCATCTATGGCACCGTAGACTTCATCTTTGGCAACGCTGCAGTGGTATTCCAAAATTGTAACATTTTTGCAAGAAAGCCTTTGGATGGCCAAGCTAACATGATCACTGCCCAAGGTCGTGGTGACCCATTCCAAAACACTGGAATTTCATTCCACAATTGTCAAATTAGGGCTGCATCAGATCTAAAGCCTGTTGTTGATAAGTACAAAACCTTCTTGGGCAGGCCATGGCAACAATACTCAAGAGTCATGGTGATGAAAACTTTTATGGACACTTTAGTGAGCCCCCTAGGTTGGTCTCCATGGGGTGACGCTGATTTTGCTCAAGACACATTGTATTATGGGGAGTATGAGAATTATGGACCTGGTTCATCAACAGCAAACAGAGTAAAATGGCCTGGTTATCATGTGATAACAAACCCAAATGAAGCATCAAAGTTTACGGTTGCTGGACTCCTTGCTGGACCAGGACCAACATGGTTGGCTAGCACTACTGTGCCATTTACATCTGGTCTTTGA
Protein sequence

>MS.gene21126.t1

MNNHFKIKHRVEFREMLVQLALKEALTMQKEAQENSQQQQNSSVHKTVHGDCLKLFEITIFHLNRTLEGLNNASKNCSPNDVQTWLTTSLTNIETCKSGALELNAQDFNFIMQTNVIEMIRNILAINMHFLKHNKETEEGSFPNWFSMHERKLLQSKSSVKFNLVVAKDGSGQYKTVQAALNAAAKRKYKTRFVIHVKKGVYKENIEVSVHNDNIMLIGDGMQNTIITSSRSVQGGYTTYSSATAGIDGLHFIARDITFQNTAGPHKGQAVALRSASDLSVFYRCAISGYQDTLMAHAQRQFYRQCFIYGTVDFIFGNAAVVFQNCNIFARKPLDGQANMITAQGRGDPFQNTGISFHNCQIRAASDLKPVVDKYKTFLGRPWQQYSRVMVMKTFMDTLVSPLGWSPWGDADFAQDTLYYGEYENYGPGSSTANRVKWPGYHVITNPNEASKFTVAGLLAGPGPTWLASTTVPFTSGL