Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23808.t1 | XP_013446324.1 | 91.7 | 276 | 11 | 1 | 1 | 264 | 1 | 276 | 1.80E-138 | 501.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23808.t1 | A0A072TT83 | 91.7 | 276 | 11 | 1 | 1 | 264 | 1 | 276 | 1.3e-138 | 501.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049424 | MS.gene23808 | 0.811746 | 6.00E-51 | -1.69E-46 |
| MS.gene050623 | MS.gene23808 | -0.805967 | 1.03E-49 | -1.69E-46 |
| MS.gene050719 | MS.gene23808 | 0.816894 | 4.37E-52 | -1.69E-46 |
| MS.gene050721 | MS.gene23808 | 0.816958 | 4.23E-52 | -1.69E-46 |
| MS.gene051633 | MS.gene23808 | 0.806246 | 9.03E-50 | -1.69E-46 |
| MS.gene052176 | MS.gene23808 | 0.828951 | 6.76E-55 | -1.69E-46 |
| MS.gene052302 | MS.gene23808 | 0.808238 | 3.42E-50 | -1.69E-46 |
| MS.gene052309 | MS.gene23808 | -0.814623 | 1.40E-51 | -1.69E-46 |
| MS.gene052376 | MS.gene23808 | 0.807968 | 3.90E-50 | -1.69E-46 |
| MS.gene052856 | MS.gene23808 | 0.830175 | 3.40E-55 | -1.69E-46 |
| MS.gene053216 | MS.gene23808 | 0.834131 | 3.58E-56 | -1.69E-46 |
| MS.gene054930 | MS.gene23808 | 0.828896 | 6.97E-55 | -1.69E-46 |
| MS.gene058399 | MS.gene23808 | 0.826606 | 2.47E-54 | -1.69E-46 |
| MS.gene058749 | MS.gene23808 | 0.809249 | 2.08E-50 | -1.69E-46 |
| MS.gene060084 | MS.gene23808 | 0.808638 | 2.81E-50 | -1.69E-46 |
| MS.gene060165 | MS.gene23808 | 0.807101 | 5.96E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23808.t1 | MTR_8g073315 | 98.008 | 251 | 5 | 0 | 14 | 264 | 31 | 281 | 0.0 | 511 |
| MS.gene23808.t1 | MTR_8g073315 | 91.667 | 276 | 11 | 1 | 1 | 264 | 1 | 276 | 3.46e-178 | 491 |
| MS.gene23808.t1 | MTR_0040s0110 | 92.032 | 251 | 11 | 1 | 14 | 264 | 3 | 244 | 2.69e-171 | 473 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene23808.t1 | AT2G25570 | 74.699 | 249 | 63 | 0 | 14 | 262 | 32 | 280 | 2.80e-140 | 396 |
| MS.gene23808.t1 | AT2G25570 | 74.699 | 249 | 63 | 0 | 14 | 262 | 32 | 280 | 2.80e-140 | 396 |
| MS.gene23808.t1 | AT2G25570 | 70.968 | 186 | 54 | 0 | 77 | 262 | 11 | 196 | 2.16e-96 | 281 |
Find 61 sgRNAs with CRISPR-Local
Find 309 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAAACATTTGGAGTGATTT+TGG | 0.118238 | 8.4:-30925804 | None:intergenic |
| CTGAACTTTATTAATGATTC+TGG | 0.153422 | 8.4:-30930491 | None:intergenic |
| TCCAGAAGCTCTTTACCTTT+TGG | 0.189427 | 8.4:+30927561 | MS.gene23808:CDS |
| TATGGATCTCTTCTTCTTAA+AGG | 0.196109 | 8.4:+30928737 | MS.gene23808:CDS |
| CCATGTTCCTGGAGCAAATA+AGG | 0.261543 | 8.4:+30926248 | MS.gene23808:CDS |
| CCCAAAAGGTAAAGAGCTTC+TGG | 0.279286 | 8.4:-30927562 | None:intergenic |
| CAACAGAGCGGCAGCATTAC+TGG | 0.291780 | 8.4:+30926881 | MS.gene23808:intron |
| CTTCAAAGCATTCCATCCTT+TGG | 0.331935 | 8.4:-30925975 | None:intergenic |
| TGGAGTAATCTTAATAATCT+TGG | 0.353530 | 8.4:-30930682 | None:intergenic |
| CGGCGTTGTGGTGTTTCCAT+AGG | 0.354597 | 8.4:+30927629 | MS.gene23808:CDS |
| ACTGGTAGAAGCAGCAGATA+TGG | 0.373269 | 8.4:+30926899 | MS.gene23808:CDS |
| CAAATGGCTTGCAAGGTTAG+AGG | 0.378199 | 8.4:+30930637 | MS.gene23808:CDS |
| GCAAAAGCAGGCTGTGATCT+TGG | 0.382710 | 8.4:+30930611 | MS.gene23808:CDS |
| ATGTACTTGTAGGGACATGC+TGG | 0.386246 | 8.4:+30928701 | MS.gene23808:intron |
| CATATGAAATACCATGTTCC+TGG | 0.401927 | 8.4:+30926237 | MS.gene23808:CDS |
| TTTCTTGCAAGATGTTGCTT+AGG | 0.408916 | 8.4:+30925771 | None:intergenic |
| TGCAGAGAGGATTGCATAGC+AGG | 0.416440 | 8.4:+30925927 | MS.gene23808:intron |
| CAAAGGATGGAATGCTTTGA+AGG | 0.417576 | 8.4:+30925976 | MS.gene23808:CDS |
| CCCAATGCATACTGTGCATC+AGG | 0.422036 | 8.4:-30926927 | None:intergenic |
| ATTATTGTGAGCTCAATGAT+AGG | 0.425093 | 8.4:+30926017 | MS.gene23808:CDS |
| TTTGGAGAAAGCTGTGGATC+AGG | 0.425741 | 8.4:+30927453 | MS.gene23808:CDS |
| ATGGTATTTCATATGCAATC+TGG | 0.435552 | 8.4:-30926229 | None:intergenic |
| TTCTTACCTCGCATTTGAGC+AGG | 0.435652 | 8.4:-30930530 | None:intergenic |
| TTCTTGCAAGATGTTGCTTA+GGG | 0.436907 | 8.4:+30925772 | None:intergenic |
| GGAGTAATCTTAATAATCTT+GGG | 0.452389 | 8.4:-30930681 | None:intergenic |
| GCTGGGGCAGCTATTGCATA+TGG | 0.457691 | 8.4:+30928719 | MS.gene23808:CDS |
| TTGGGTGCTGTATATTTGAC+TGG | 0.459180 | 8.4:+30927580 | MS.gene23808:CDS |
| GGCGTTGTGGTGTTTCCATA+GGG | 0.465945 | 8.4:+30927630 | MS.gene23808:CDS |
| TACACAGCCTTATTTGCTCC+AGG | 0.472685 | 8.4:-30926255 | None:intergenic |
| CCAATACTCATGCTAGGTAT+TGG | 0.472965 | 8.4:+30926202 | MS.gene23808:CDS |
| TTACCTTCTCTGATGCCCTA+TGG | 0.498613 | 8.4:-30927645 | None:intergenic |
| TTGGATTCAAATGGCTTGCA+AGG | 0.500516 | 8.4:+30930630 | MS.gene23808:CDS |
| TGTTAAGAAAGATATTGCTT+CGG | 0.501886 | 8.4:+30927609 | MS.gene23808:CDS |
| CTGGTAGAAGCAGCAGATAT+GGG | 0.516752 | 8.4:+30926900 | MS.gene23808:CDS |
| CCTTATTTGCTCCAGGAACA+TGG | 0.523897 | 8.4:-30926248 | None:intergenic |
| GCTGTGATCTTGGATTCAAA+TGG | 0.526301 | 8.4:+30930621 | MS.gene23808:CDS |
| ATTGGTGTTGTCAGCCTCCA+AGG | 0.534373 | 8.4:-30926184 | None:intergenic |
| TCAAATATACAGCACCCAAA+AGG | 0.537596 | 8.4:-30927576 | None:intergenic |
| CCTGATGCACAGTATGCATT+GGG | 0.538507 | 8.4:+30926927 | MS.gene23808:CDS |
| GGGTTGTCATTTAAGAGTAG+AGG | 0.540282 | 8.4:+30926947 | MS.gene23808:CDS |
| CCAATACCTAGCATGAGTAT+TGG | 0.541205 | 8.4:-30926202 | None:intergenic |
| TTTCAGATAGCTGCAAAAGC+AGG | 0.541336 | 8.4:+30930599 | MS.gene23808:CDS |
| TCCTTTGGCAATAAACTCCA+TGG | 0.542087 | 8.4:-30925960 | None:intergenic |
| TGCAATTGATCCAGTAGAGA+TGG | 0.542124 | 8.4:+30930565 | MS.gene23808:CDS |
| TGGAGTTTATTGCCAAAGGA+TGG | 0.542248 | 8.4:+30925963 | MS.gene23808:CDS |
| TTATTATTTGGAGAAAGCTG+TGG | 0.545230 | 8.4:+30927447 | MS.gene23808:CDS |
| AAGATATTGCTTCGGCGTTG+TGG | 0.548648 | 8.4:+30927617 | MS.gene23808:CDS |
| GCCATGGAGTTTATTGCCAA+AGG | 0.559060 | 8.4:+30925959 | MS.gene23808:CDS |
| TGTACTTGTAGGGACATGCT+GGG | 0.572949 | 8.4:+30928702 | MS.gene23808:intron |
| TCCTGATGCACAGTATGCAT+TGG | 0.573129 | 8.4:+30926926 | MS.gene23808:CDS |
| GAGCGATTACGTTAAGAAGA+GGG | 0.586094 | 8.4:-30926048 | None:intergenic |
| TTTCCATAGGGCATCAGAGA+AGG | 0.588045 | 8.4:+30927642 | MS.gene23808:CDS |
| ATAAAGTTCAGTTTGAAGAG+AGG | 0.588848 | 8.4:+30930503 | MS.gene23808:CDS |
| ACAACACCAATACTCATGCT+AGG | 0.599248 | 8.4:+30926196 | MS.gene23808:CDS |
| CGAGCGATTACGTTAAGAAG+AGG | 0.599634 | 8.4:-30926049 | None:intergenic |
| TAGCAGGAACAAGAAAGCCA+TGG | 0.626061 | 8.4:+30925943 | MS.gene23808:CDS |
| GGTTCATAAATAGACAGCAA+AGG | 0.661580 | 8.4:+30926146 | MS.gene23808:intron |
| ATGGCTTGCAAGGTTAGAGG+AGG | 0.666157 | 8.4:+30930640 | MS.gene23808:CDS |
| GGTGCACCTGCTCAAATGCG+AGG | 0.688165 | 8.4:+30930524 | MS.gene23808:CDS |
| GGTTAGAGGAGGAAGAGAAG+CGG | 0.689049 | 8.4:+30930651 | MS.gene23808:CDS |
| GTACTTGTAGGGACATGCTG+GGG | 0.726548 | 8.4:+30928703 | MS.gene23808:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATAATTGCAAAAATATAAT+CGG | - | chr8.4:30927275-30927294 | None:intergenic | 10.0% |
| !!! | AAACATTTTTTTAGTATTTA+TGG | + | chr8.4:30927724-30927743 | MS.gene23808:intron | 10.0% |
| !! | AATAATTTACCAAAAATGTT+TGG | - | chr8.4:30929658-30929677 | None:intergenic | 15.0% |
| !! | ATAATTGCAAAAATATAATC+GGG | - | chr8.4:30927274-30927293 | None:intergenic | 15.0% |
| !! | TCTAAAAATAAAGAAGTAAA+TGG | - | chr8.4:30926081-30926100 | None:intergenic | 15.0% |
| !!! | AAAAAACTAGTAGTTAATTT+TGG | + | chr8.4:30926588-30926607 | MS.gene23808:intron | 15.0% |
| !!! | ACATTTAATTTTTTTGCTAT+TGG | + | chr8.4:30928233-30928252 | MS.gene23808:intron | 15.0% |
| !!! | ATAAGTTTTGAAAGAAAAAT+TGG | - | chr8.4:30928035-30928054 | None:intergenic | 15.0% |
| !!! | ATTATTTTTGTTATTACTAG+TGG | + | chr8.4:30926391-30926410 | MS.gene23808:intron | 15.0% |
| !!! | CATGTTTTGAAATTTAAATT+TGG | + | chr8.4:30926517-30926536 | MS.gene23808:intron | 15.0% |
| !!! | TAAACTATTTGAAATTACTT+TGG | - | chr8.4:30929901-30929920 | None:intergenic | 15.0% |
| !! | AAAAAATCTAACAAAAACTC+AGG | - | chr8.4:30927356-30927375 | None:intergenic | 20.0% |
| !! | AAAACTAATATGAATGTCAT+TGG | - | chr8.4:30926830-30926849 | None:intergenic | 20.0% |
| !! | AAATTAAATGTTACCTTTCA+AGG | - | chr8.4:30928224-30928243 | None:intergenic | 20.0% |
| !! | AACATATAACATACACAATA+AGG | - | chr8.4:30927532-30927551 | None:intergenic | 20.0% |
| !! | AATCTGCAAATAGTAATTTA+AGG | - | chr8.4:30927076-30927095 | None:intergenic | 20.0% |
| !! | AGTAAACATTAGACTTTAAA+TGG | + | chr8.4:30926753-30926772 | MS.gene23808:intron | 20.0% |
| !! | ATATATATGGATTTCTTTGA+TGG | - | chr8.4:30926335-30926354 | None:intergenic | 20.0% |
| !! | ATTAATATCAGACTTTAAAC+AGG | - | chr8.4:30930436-30930455 | None:intergenic | 20.0% |
| !! | CATAAATATTCAGAAACTAT+AGG | + | chr8.4:30928950-30928969 | MS.gene23808:intron | 20.0% |
| !! | GTATAATACTTGAATACATT+AGG | + | chr8.4:30927318-30927337 | MS.gene23808:intron | 20.0% |
| !! | GTCTGATATTAATAAAAGAA+AGG | + | chr8.4:30930443-30930462 | MS.gene23808:intron | 20.0% |
| !! | TAAATACATTCGATTAAACT+CGG | - | chr8.4:30928594-30928613 | None:intergenic | 20.0% |
| !! | TACATTTATAGATATGTTCT+TGG | - | chr8.4:30926362-30926381 | None:intergenic | 20.0% |
| !! | TAGTATGAGAATTTCAATAA+AGG | + | chr8.4:30928181-30928200 | MS.gene23808:intron | 20.0% |
| !! | TGTTTCTTTATAATATGGTA+TGG | + | chr8.4:30926611-30926630 | MS.gene23808:intron | 20.0% |
| !! | TTAAAACAAACAATCTTTGT+TGG | + | chr8.4:30930345-30930364 | MS.gene23808:intron | 20.0% |
| !! | TTAATATCAGACTTTAAACA+GGG | - | chr8.4:30930435-30930454 | None:intergenic | 20.0% |
| !! | TTGGCTATAATATACTTAAA+CGG | - | chr8.4:30927006-30927025 | None:intergenic | 20.0% |
| !!! | AACAAAGATTGTTTGTTTTA+AGG | - | chr8.4:30930346-30930365 | None:intergenic | 20.0% |
| !!! | AAGTTATGGTTTTTGATTAA+AGG | - | chr8.4:30930229-30930248 | None:intergenic | 20.0% |
| !!! | ATATTTATTAGCTTGCATTT+CGG | + | chr8.4:30930123-30930142 | MS.gene23808:intron | 20.0% |
| !!! | ATTTTGTATTCTCTTTTACA+GGG | - | chr8.4:30929227-30929246 | None:intergenic | 20.0% |
| !!! | GAATTGTATTCTAAAATTAC+TGG | + | chr8.4:30928140-30928159 | MS.gene23808:intron | 20.0% |
| !!! | GATTGTATTTTAACTTTTTG+TGG | + | chr8.4:30927113-30927132 | MS.gene23808:intron | 20.0% |
| !!! | GCAATTATATTTGATTTCTA+AGG | + | chr8.4:30927286-30927305 | MS.gene23808:intron | 20.0% |
| !!! | GTGTTTTTATTTATGTGTTT+TGG | - | chr8.4:30928267-30928286 | None:intergenic | 20.0% |
| !!! | GTTTACTTGTTATGAAAATA+TGG | - | chr8.4:30928903-30928922 | None:intergenic | 20.0% |
| !!! | TCAACAAGCTTTTTATTATT+TGG | + | chr8.4:30927435-30927454 | MS.gene23808:CDS | 20.0% |
| !!! | TCTTCATTTAATTTAGGATT+CGG | + | chr8.4:30928771-30928790 | MS.gene23808:intron | 20.0% |
| !!! | TTCTCACTTTTAACTATATA+AGG | - | chr8.4:30929192-30929211 | None:intergenic | 20.0% |
| !!! | TTTGGTGTTTCTTTATAATA+TGG | + | chr8.4:30926606-30926625 | MS.gene23808:intron | 20.0% |
| !!! | TTTTCTTTCAAAACTTATAC+TGG | + | chr8.4:30928037-30928056 | MS.gene23808:intron | 20.0% |
| ! | AAAGGATGAGAAAAATAACA+AGG | - | chr8.4:30930211-30930230 | None:intergenic | 25.0% |
| ! | AAATACATTCGATTAAACTC+GGG | - | chr8.4:30928593-30928612 | None:intergenic | 25.0% |
| ! | AAGGATGAGAAAAATAACAA+GGG | - | chr8.4:30930210-30930229 | None:intergenic | 25.0% |
| ! | AATTGGAAAAGAGAAACATT+TGG | - | chr8.4:30925818-30925837 | None:intergenic | 25.0% |
| ! | ACACATAAATAAAAACACAC+TGG | + | chr8.4:30928269-30928288 | MS.gene23808:intron | 25.0% |
| ! | ACATTAGACTTTAAATGGAA+AGG | + | chr8.4:30926758-30926777 | MS.gene23808:intron | 25.0% |
| ! | AGTAAACATTCAGAAACTAT+AGG | + | chr8.4:30928916-30928935 | MS.gene23808:intron | 25.0% |
| ! | ATGGTTTAGTTAGAAGTTAA+AGG | - | chr8.4:30930277-30930296 | None:intergenic | 25.0% |
| ! | CACATAAATAAAAACACACT+GGG | + | chr8.4:30928270-30928289 | MS.gene23808:intron | 25.0% |
| ! | CATGAAGAAACAAAACATAA+CGG | - | chr8.4:30926299-30926318 | None:intergenic | 25.0% |
| ! | CTGAACTTTATTAATGATTC+TGG | - | chr8.4:30930494-30930513 | None:intergenic | 25.0% |
| ! | GTTAAAAGTGAGAATACAAA+AGG | + | chr8.4:30929198-30929217 | MS.gene23808:intron | 25.0% |
| ! | GTTATAACTTATATGACCTT+CGG | + | chr8.4:30927147-30927166 | MS.gene23808:intron | 25.0% |
| ! | TATTGAATACTTTGCACAAT+GGG | + | chr8.4:30929674-30929693 | MS.gene23808:intron | 25.0% |
| ! | TGTTAAGAAAGATATTGCTT+CGG | + | chr8.4:30927609-30927628 | MS.gene23808:CDS | 25.0% |
| ! | TGTTCTTGGCATAATATATA+TGG | - | chr8.4:30926348-30926367 | None:intergenic | 25.0% |
| ! | TTATAACTTATATGACCTTC+GGG | + | chr8.4:30927148-30927167 | MS.gene23808:intron | 25.0% |
| ! | TTATTGAATACTTTGCACAA+TGG | + | chr8.4:30929673-30929692 | MS.gene23808:intron | 25.0% |
| ! | TTCCTCCTTTAATTATGATT+CGG | - | chr8.4:30928400-30928419 | None:intergenic | 25.0% |
| ! | TTGTTATCCAAATCATTACA+CGG | + | chr8.4:30926646-30926665 | MS.gene23808:intron | 25.0% |
| ! | TTTCACATTCTTCATAACAA+AGG | + | chr8.4:30930099-30930118 | MS.gene23808:intron | 25.0% |
| !! | AACGGATTTCTAACAATATA+AGG | - | chr8.4:30926988-30927007 | None:intergenic | 25.0% |
| !! | ACATTTTCATGTGTAGATAA+AGG | - | chr8.4:30928537-30928556 | None:intergenic | 25.0% |
| !! | ATACTATGACTATTTCTTGT+TGG | - | chr8.4:30928167-30928186 | None:intergenic | 25.0% |
| !! | CATTTTGTATTCTCTTTTAC+AGG | - | chr8.4:30929228-30929247 | None:intergenic | 25.0% |
| !! | CTTTGAAAAACTTTAACTAC+TGG | - | chr8.4:30927999-30928018 | None:intergenic | 25.0% |
| !! | GAAGTTTACACGTTTTTAAT+AGG | + | chr8.4:30929141-30929160 | MS.gene23808:intron | 25.0% |
| !! | TACTATGACTATTTCTTGTT+GGG | - | chr8.4:30928166-30928185 | None:intergenic | 25.0% |
| !! | TATCAGAAAACACGTTTTTA+GGG | + | chr8.4:30929261-30929280 | MS.gene23808:intron | 25.0% |
| !! | TTATCAGAAAACACGTTTTT+AGG | + | chr8.4:30929260-30929279 | MS.gene23808:intron | 25.0% |
| !! | TTCTAACTTGTGAAATTAGT+AGG | - | chr8.4:30929124-30929143 | None:intergenic | 25.0% |
| !! | TTGCGTTCTTCATTTAATTT+AGG | + | chr8.4:30928765-30928784 | MS.gene23808:intron | 25.0% |
| !!! | AAATAGAAGTTCTAGCATTT+TGG | + | chr8.4:30930061-30930080 | MS.gene23808:intron | 25.0% |
| !!! | TGACATTCATATTAGTTTTG+TGG | + | chr8.4:30926831-30926850 | MS.gene23808:intron | 25.0% |
| !!! | TTGATTTCTAAGGTTTACTT+GGG | + | chr8.4:30927296-30927315 | MS.gene23808:intron | 25.0% |
| !!! | TTTGATTTCTAAGGTTTACT+TGG | + | chr8.4:30927295-30927314 | MS.gene23808:intron | 25.0% |
| AAAATGTTTAATACAGTGCG+AGG | - | chr8.4:30927713-30927732 | None:intergenic | 30.0% | |
| AATAGTAATTTAAGGAGGCA+TGG | - | chr8.4:30927068-30927087 | None:intergenic | 30.0% | |
| ACACCTATTACATGTTCTTA+AGG | - | chr8.4:30929495-30929514 | None:intergenic | 30.0% | |
| ACTTCTAACTAAACCATGTT+TGG | + | chr8.4:30930280-30930299 | MS.gene23808:intron | 30.0% | |
| ACTTTATTCCATGTACTTGT+AGG | + | chr8.4:30928691-30928710 | MS.gene23808:intron | 30.0% | |
| AGTAACTGCTATCAACAATT+AGG | + | chr8.4:30925854-30925873 | MS.gene23808:intron | 30.0% | |
| AGTAATCAATGAAACTCTAG+AGG | - | chr8.4:30927963-30927982 | None:intergenic | 30.0% | |
| ATAAAGTTCAGTTTGAAGAG+AGG | + | chr8.4:30930503-30930522 | MS.gene23808:CDS | 30.0% | |
| ATAAATAAAAACACACTGGG+AGG | + | chr8.4:30928273-30928292 | MS.gene23808:intron | 30.0% | |
| ATGGTATTTCATATGCAATC+TGG | - | chr8.4:30926232-30926251 | None:intergenic | 30.0% | |
| ATGTCTATTACATGTTCTTC+AGG | - | chr8.4:30929843-30929862 | None:intergenic | 30.0% | |
| ATGTGTAGATAAAGGAACAT+CGG | - | chr8.4:30928529-30928548 | None:intergenic | 30.0% | |
| ATTATTGTGAGCTCAATGAT+AGG | + | chr8.4:30926017-30926036 | MS.gene23808:CDS | 30.0% | |
| CAAGACACATTAATACCAAT+AGG | + | chr8.4:30930320-30930339 | MS.gene23808:intron | 30.0% | |
| CTACTAGTACACCATTTAAA+AGG | + | chr8.4:30928993-30929012 | MS.gene23808:intron | 30.0% | |
| CTGCAAATAGTAATTTAAGG+AGG | - | chr8.4:30927073-30927092 | None:intergenic | 30.0% | |
| CTTCTAACTAAACCATGTTT+GGG | + | chr8.4:30930281-30930300 | MS.gene23808:intron | 30.0% | |
| CTTTATTCCATGTACTTGTA+GGG | + | chr8.4:30928692-30928711 | MS.gene23808:intron | 30.0% | |
| GCAAAAATTGAAAGTGGTTT+GGG | - | chr8.4:30929419-30929438 | None:intergenic | 30.0% | |
| GTAATAGACATCAATAGCTT+AGG | + | chr8.4:30929852-30929871 | MS.gene23808:intron | 30.0% | |
| TAAATAAAAACACACTGGGA+GGG | + | chr8.4:30928274-30928293 | MS.gene23808:intron | 30.0% | |
| TATGAACCTCAAATAAGCAA+AGG | - | chr8.4:30926134-30926153 | None:intergenic | 30.0% | |
| TATGGATCTCTTCTTCTTAA+AGG | + | chr8.4:30928737-30928756 | MS.gene23808:CDS | 30.0% | |
| TCACCTTAAGAACATGTAAT+AGG | + | chr8.4:30929489-30929508 | MS.gene23808:intron | 30.0% | |
| TCTACAAAAAATGCAGAGTT+GGG | - | chr8.4:30929297-30929316 | None:intergenic | 30.0% | |
| TCTTAATGCTGAATTACTAG+TGG | + | chr8.4:30927226-30927245 | MS.gene23808:intron | 30.0% | |
| TGCTATGAAATTGTTTGTGT+TGG | + | chr8.4:30926680-30926699 | MS.gene23808:intron | 30.0% | |
| TGTCTATTACATGTTCTTCA+GGG | - | chr8.4:30929842-30929861 | None:intergenic | 30.0% | |
| TGTTATTACTAGTGGAAAGA+CGG | + | chr8.4:30926399-30926418 | MS.gene23808:intron | 30.0% | |
| TTATTATTTGGAGAAAGCTG+TGG | + | chr8.4:30927447-30927466 | MS.gene23808:CDS | 30.0% | |
| TTCAATGAAAAAGATGCAAG+CGG | - | chr8.4:30929340-30929359 | None:intergenic | 30.0% | |
| TTCTACAAAAAATGCAGAGT+TGG | - | chr8.4:30929298-30929317 | None:intergenic | 30.0% | |
| TTTCGCCGAATCATAATTAA+AGG | + | chr8.4:30928392-30928411 | MS.gene23808:intron | 30.0% | |
| ! | ATTGACTCAATCTTCATGTT+TGG | - | chr8.4:30927025-30927044 | None:intergenic | 30.0% |
| ! | CAAGATTGTTACATTAGTCT+AGG | - | chr8.4:30930036-30930055 | None:intergenic | 30.0% |
| ! | CACTGTACTTTTATGTTTTC+TGG | + | chr8.4:30930385-30930404 | MS.gene23808:intron | 30.0% |
| ! | CGTGTTTTCTGATAAAAATG+AGG | - | chr8.4:30929255-30929274 | None:intergenic | 30.0% |
| ! | CTTTTAAATGGTGTACTAGT+AGG | - | chr8.4:30928995-30929014 | None:intergenic | 30.0% |
| ! | GTAGAAAACGACCTTTTAAA+TGG | - | chr8.4:30929007-30929026 | None:intergenic | 30.0% |
| ! | TACTACTAAGCTTTTCATGA+AGG | - | chr8.4:30927921-30927940 | None:intergenic | 30.0% |
| ! | TCTTTTCCAATTCAATCAAC+AGG | + | chr8.4:30925826-30925845 | MS.gene23808:intron | 30.0% |
| ! | TGTACTTTTATGTTTTCTGG+TGG | + | chr8.4:30930388-30930407 | MS.gene23808:intron | 30.0% |
| ! | TTAATTATGATTCGGCGAAA+GGG | - | chr8.4:30928392-30928411 | None:intergenic | 30.0% |
| ! | TTTAATTATGATTCGGCGAA+AGG | - | chr8.4:30928393-30928412 | None:intergenic | 30.0% |
| !! | AAAAAGCTTGTTGATCTGAA+TGG | - | chr8.4:30927429-30927448 | None:intergenic | 30.0% |
| !! | AGAAACATTTGGAGTGATTT+TGG | - | chr8.4:30925807-30925826 | None:intergenic | 30.0% |
| !! | GAAACATTTGGAGTGATTTT+GGG | - | chr8.4:30925806-30925825 | None:intergenic | 30.0% |
| !! | GTACTTTTATGTTTTCTGGT+GGG | + | chr8.4:30930389-30930408 | MS.gene23808:intron | 30.0% |
| !! | TTACCAAAAATGTTTGGTGT+CGG | - | chr8.4:30929652-30929671 | None:intergenic | 30.0% |
| !!! | CTTGTTCAGAGATTTTGATT+TGG | + | chr8.4:30928661-30928680 | MS.gene23808:intron | 30.0% |
| !!! | TTGTTTGTTTTAAGGCCTAT+TGG | - | chr8.4:30930338-30930357 | None:intergenic | 30.0% |
| AAATGTGTTGTCTTTAGCGT+AGG | - | chr8.4:30928479-30928498 | None:intergenic | 35.0% | |
| ACTTCAACAGTCTCAAACTA+TGG | + | chr8.4:30930245-30930264 | MS.gene23808:intron | 35.0% | |
| ATATGTTTGGAGACAGAATG+AGG | + | chr8.4:30927399-30927418 | MS.gene23808:intron | 35.0% | |
| ATTATCAGAAAAAGCAGTGC+TGG | - | chr8.4:30930183-30930202 | None:intergenic | 35.0% | |
| ATTCAGAAACTATAGGCACT+TGG | + | chr8.4:30928923-30928942 | MS.gene23808:intron | 35.0% | |
| CAATAAAGGTTCAGTATGCA+TGG | + | chr8.4:30928195-30928214 | MS.gene23808:intron | 35.0% | |
| CATATGAAATACCATGTTCC+TGG | + | chr8.4:30926237-30926256 | MS.gene23808:CDS | 35.0% | |
| CATGTTTGGGAATTATACAC+AGG | + | chr8.4:30930294-30930313 | MS.gene23808:intron | 35.0% | |
| CTGTGTATAATTCCCAAACA+TGG | - | chr8.4:30930296-30930315 | None:intergenic | 35.0% | |
| GAAAAGAACTGTGTTGTCTA+GGG | + | chr8.4:30926539-30926558 | MS.gene23808:intron | 35.0% | |
| GAAGAAACAAAACATAACGG+AGG | - | chr8.4:30926296-30926315 | None:intergenic | 35.0% | |
| GATAGACCTTTGCTTATTTG+AGG | + | chr8.4:30926125-30926144 | MS.gene23808:intron | 35.0% | |
| GGCAAAAATTGAAAGTGGTT+TGG | - | chr8.4:30929420-30929439 | None:intergenic | 35.0% | |
| GGTTCATAAATAGACAGCAA+AGG | + | chr8.4:30926146-30926165 | MS.gene23808:intron | 35.0% | |
| GTAATAGGTGTCAATAGCTT+AGG | + | chr8.4:30929504-30929523 | MS.gene23808:intron | 35.0% | |
| GTCTATTACATGTTCTTCAG+GGG | - | chr8.4:30929841-30929860 | None:intergenic | 35.0% | |
| TCAAATATACAGCACCCAAA+AGG | - | chr8.4:30927579-30927598 | None:intergenic | 35.0% | |
| TGAGTAGCTATTCACAAGAA+TGG | + | chr8.4:30926727-30926746 | MS.gene23808:intron | 35.0% | |
| TGATTTATAGCATGCAGTCA+GGG | + | chr8.4:30928341-30928360 | MS.gene23808:intron | 35.0% | |
| TGCTTGTTTAACTCCATTTC+AGG | - | chr8.4:30929980-30929999 | None:intergenic | 35.0% | |
| TTGCAAAAATATAATCGGGC+AGG | - | chr8.4:30927270-30927289 | None:intergenic | 35.0% | |
| TTGTACTATAGAGGAAACTC+AGG | + | chr8.4:30929538-30929557 | MS.gene23808:intron | 35.0% | |
| ! | AAAAGCAGTGCTGGAATAAA+AGG | - | chr8.4:30930174-30930193 | None:intergenic | 35.0% |
| ! | AAAGCAGTGCTGGAATAAAA+GGG | - | chr8.4:30930173-30930192 | None:intergenic | 35.0% |
| ! | AATCCGACACCAAACATTTT+TGG | + | chr8.4:30929646-30929665 | MS.gene23808:intron | 35.0% |
| ! | ATGTATTCACTTTAAGAGCG+AGG | - | chr8.4:30927849-30927868 | None:intergenic | 35.0% |
| ! | GCAGATTTGCTTATCTTTGT+TGG | + | chr8.4:30925893-30925912 | MS.gene23808:intron | 35.0% |
| ! | GGGCATTTTGAACAGAAAAT+AGG | + | chr8.4:30926559-30926578 | MS.gene23808:intron | 35.0% |
| ! | GTTTGAGACTGTTGAAGTTA+TGG | - | chr8.4:30930243-30930262 | None:intergenic | 35.0% |
| ! | TACATGCCTGTTGATTGAAT+TGG | - | chr8.4:30925835-30925854 | None:intergenic | 35.0% |
| ! | TGTATTCACTTTAAGAGCGA+GGG | - | chr8.4:30927848-30927867 | None:intergenic | 35.0% |
| ! | TTTTCTTTTGCCATCTCTAC+TGG | - | chr8.4:30930578-30930597 | None:intergenic | 35.0% |
| !! | GTACAATCCAACCGATTTTA+CGG | + | chr8.4:30929371-30929390 | MS.gene23808:intron | 35.0% |
| !! | TTTAACTCCATTTCAGGTTG+TGG | - | chr8.4:30929974-30929993 | None:intergenic | 35.0% |
| !!! | ATTTATGTGTTTTGGCCACT+AGG | - | chr8.4:30928259-30928278 | None:intergenic | 35.0% |
| !!! | TCTGCATTTTTTGTAGAACC+AGG | + | chr8.4:30929300-30929319 | MS.gene23808:intron | 35.0% |
| !!! | TTTTTTTGCTATTGGCCTAG+TGG | + | chr8.4:30928241-30928260 | MS.gene23808:intron | 35.0% |
| AAGAAAGGATATTGTGCCTC+AGG | + | chr8.4:30930458-30930477 | MS.gene23808:intron | 40.0% | |
| AAGCAAACCACAACCTGAAA+TGG | + | chr8.4:30929964-30929983 | MS.gene23808:intron | 40.0% | |
| ACAACACCAATACTCATGCT+AGG | + | chr8.4:30926196-30926215 | MS.gene23808:CDS | 40.0% | |
| ACATCAATAGCTTAGGTGCT+GGG | + | chr8.4:30929859-30929878 | MS.gene23808:intron | 40.0% | |
| AGAAACGCCGTGTAATGATT+TGG | - | chr8.4:30926656-30926675 | None:intergenic | 40.0% | |
| ATAACCAAGTGCAGCTTGAA+AGG | - | chr8.4:30928851-30928870 | None:intergenic | 40.0% | |
| ATGAAAAAGATGCAAGCGGT+CGG | - | chr8.4:30929336-30929355 | None:intergenic | 40.0% | |
| CAAAGGATGGAATGCTTTGA+AGG | + | chr8.4:30925976-30925995 | MS.gene23808:CDS | 40.0% | |
| CCAATACCTAGCATGAGTAT+TGG | - | chr8.4:30926205-30926224 | None:intergenic | 40.0% | |
| CCAATACTCATGCTAGGTAT+TGG | + | chr8.4:30926202-30926221 | MS.gene23808:CDS | 40.0% | |
| CGCCGAATCATAATTAAAGG+AGG | + | chr8.4:30928395-30928414 | MS.gene23808:intron | 40.0% | |
| GAATCATCTCTAACTCCACT+AGG | - | chr8.4:30929744-30929763 | None:intergenic | 40.0% | |
| GAGCGATTACGTTAAGAAGA+GGG | - | chr8.4:30926051-30926070 | None:intergenic | 40.0% | |
| GCTGTGATCTTGGATTCAAA+TGG | + | chr8.4:30930621-30930640 | MS.gene23808:CDS | 40.0% | |
| GCTTAATCTGATCAGTGATC+AGG | - | chr8.4:30929948-30929967 | None:intergenic | 40.0% | |
| GGAAAAGAACTGTGTTGTCT+AGG | + | chr8.4:30926538-30926557 | MS.gene23808:intron | 40.0% | |
| GGATATTGTTGTATGCAGAG+AGG | + | chr8.4:30925914-30925933 | MS.gene23808:intron | 40.0% | |
| GGCAGGATCAAAGTTACATA+AGG | - | chr8.4:30927486-30927505 | None:intergenic | 40.0% | |
| GGGCAGGACAATAAAAACAA+AGG | - | chr8.4:30927254-30927273 | None:intergenic | 40.0% | |
| GTCATTTAAGAGTAGAGGTG+AGG | + | chr8.4:30926952-30926971 | MS.gene23808:intron | 40.0% | |
| GTGATTTATAGCATGCAGTC+AGG | + | chr8.4:30928340-30928359 | MS.gene23808:intron | 40.0% | |
| TAAAGGTTCAGTATGCATGG+AGG | + | chr8.4:30928198-30928217 | MS.gene23808:intron | 40.0% | |
| TCAGGAAAGTAACGTCAAGT+AGG | + | chr8.4:30929556-30929575 | MS.gene23808:intron | 40.0% | |
| TCCTTTGGCAATAAACTCCA+TGG | - | chr8.4:30925963-30925982 | None:intergenic | 40.0% | |
| TGCAATTGATCCAGTAGAGA+TGG | + | chr8.4:30930565-30930584 | MS.gene23808:CDS | 40.0% | |
| TGGAGTTTATTGCCAAAGGA+TGG | + | chr8.4:30925963-30925982 | MS.gene23808:CDS | 40.0% | |
| TTTACAACAGACCTTCCTAG+TGG | + | chr8.4:30929726-30929745 | MS.gene23808:intron | 40.0% | |
| TTTCAAGCTGCACTTGGTTA+TGG | + | chr8.4:30928850-30928869 | MS.gene23808:intron | 40.0% | |
| TTTCAGATAGCTGCAAAAGC+AGG | + | chr8.4:30930599-30930618 | MS.gene23808:CDS | 40.0% | |
| ! | AAGGAGGCATGGATGAATAA+TGG | - | chr8.4:30927057-30927076 | None:intergenic | 40.0% |
| ! | CCAGAAGCTCTTTACCTTTT+GGG | + | chr8.4:30927562-30927581 | MS.gene23808:CDS | 40.0% |
| ! | CGGTGATTTAGAATGAGTTC+AGG | + | chr8.4:30927777-30927796 | MS.gene23808:intron | 40.0% |
| ! | CTTCAAAGCATTCCATCCTT+TGG | - | chr8.4:30925978-30925997 | None:intergenic | 40.0% |
| ! | GATGCATTTGAAATTGTGGC+AGG | - | chr8.4:30927503-30927522 | None:intergenic | 40.0% |
| ! | GGGTTGTCATTTAAGAGTAG+AGG | + | chr8.4:30926947-30926966 | MS.gene23808:CDS | 40.0% |
| ! | TCCAGAAGCTCTTTACCTTT+TGG | + | chr8.4:30927561-30927580 | MS.gene23808:CDS | 40.0% |
| ! | TCGCGATGCATTTGAAATTG+TGG | - | chr8.4:30927507-30927526 | None:intergenic | 40.0% |
| ! | TTGGATTCAAATGGCTTGCA+AGG | + | chr8.4:30930630-30930649 | MS.gene23808:CDS | 40.0% |
| ! | TTGGGTGCTGTATATTTGAC+TGG | + | chr8.4:30927580-30927599 | MS.gene23808:CDS | 40.0% |
| !! | AACCGATTTTACGGCTTTGT+GGG | + | chr8.4:30929380-30929399 | MS.gene23808:intron | 40.0% |
| !! | CTGGCTTGTTTGTACTATAG+AGG | + | chr8.4:30929529-30929548 | MS.gene23808:intron | 40.0% |
| !!! | TATCCGTACTTTTTCACGTG+CGG | + | chr8.4:30927757-30927776 | MS.gene23808:intron | 40.0% |
| !!! | TTCTGGAATTTTGACACCTG+AGG | - | chr8.4:30930477-30930496 | None:intergenic | 40.0% |
| AAAGAGCTTCTGGATGCAAC+TGG | - | chr8.4:30927555-30927574 | None:intergenic | 45.0% | |
| AAGATATTGCTTCGGCGTTG+TGG | + | chr8.4:30927617-30927636 | MS.gene23808:CDS | 45.0% | |
| AAGTGCAGCTTGAAAGGAAG+TGG | - | chr8.4:30928845-30928864 | None:intergenic | 45.0% | |
| ACTGGTAGAAGCAGCAGATA+TGG | + | chr8.4:30926899-30926918 | MS.gene23808:CDS | 45.0% | |
| ACTTCCTTTCAAGCTGCACT+TGG | + | chr8.4:30928844-30928863 | MS.gene23808:intron | 45.0% | |
| AGCATGTCCCTACAAGTACA+TGG | - | chr8.4:30928702-30928721 | None:intergenic | 45.0% | |
| AGTGCAGCTTGAAAGGAAGT+GGG | - | chr8.4:30928844-30928863 | None:intergenic | 45.0% | |
| ATGTACTTGTAGGGACATGC+TGG | + | chr8.4:30928701-30928720 | MS.gene23808:intron | 45.0% | |
| CACAAAGCCGTAAAATCGGT+TGG | - | chr8.4:30929381-30929400 | None:intergenic | 45.0% | |
| CATCTCTAACTCCACTAGGA+AGG | - | chr8.4:30929740-30929759 | None:intergenic | 45.0% | |
| CCATGTTCCTGGAGCAAATA+AGG | + | chr8.4:30926248-30926267 | MS.gene23808:CDS | 45.0% | |
| CCCAAAAGGTAAAGAGCTTC+TGG | - | chr8.4:30927565-30927584 | None:intergenic | 45.0% | |
| CCTGATGCACAGTATGCATT+GGG | + | chr8.4:30926927-30926946 | MS.gene23808:CDS | 45.0% | |
| CGAGCGATTACGTTAAGAAG+AGG | - | chr8.4:30926052-30926071 | None:intergenic | 45.0% | |
| CTGGTAGAAGCAGCAGATAT+GGG | + | chr8.4:30926900-30926919 | MS.gene23808:CDS | 45.0% | |
| GACATCAATAGCTTAGGTGC+TGG | + | chr8.4:30929858-30929877 | MS.gene23808:intron | 45.0% | |
| GCCATGGAGTTTATTGCCAA+AGG | + | chr8.4:30925959-30925978 | MS.gene23808:CDS | 45.0% | |
| GGATCGTATCATGGATCGTA+AGG | + | chr8.4:30929097-30929116 | MS.gene23808:intron | 45.0% | |
| GGCGAGGCAAAAATTGAAAG+TGG | - | chr8.4:30929425-30929444 | None:intergenic | 45.0% | |
| GGTGTCAATAGCTTAGGTTC+TGG | + | chr8.4:30929510-30929529 | MS.gene23808:intron | 45.0% | |
| TAGCAGGAACAAGAAAGCCA+TGG | + | chr8.4:30925943-30925962 | MS.gene23808:CDS | 45.0% | |
| TATGACCTTCGGGATGAGAA+TGG | + | chr8.4:30927158-30927177 | MS.gene23808:intron | 45.0% | |
| TCACCGCACGTGAAAAAGTA+CGG | - | chr8.4:30927763-30927782 | None:intergenic | 45.0% | |
| TCCTGATGCACAGTATGCAT+TGG | + | chr8.4:30926926-30926945 | MS.gene23808:CDS | 45.0% | |
| TGAAAAAGATGCAAGCGGTC+GGG | - | chr8.4:30929335-30929354 | None:intergenic | 45.0% | |
| TGCCCACAAAGCCGTAAAAT+CGG | - | chr8.4:30929385-30929404 | None:intergenic | 45.0% | |
| TGTACTTGTAGGGACATGCT+GGG | + | chr8.4:30928702-30928721 | MS.gene23808:intron | 45.0% | |
| TTACCTTCTCTGATGCCCTA+TGG | - | chr8.4:30927648-30927667 | None:intergenic | 45.0% | |
| TTCTTACCTCGCATTTGAGC+AGG | - | chr8.4:30930533-30930552 | None:intergenic | 45.0% | |
| TTTATAGCATGCAGTCAGGG+AGG | + | chr8.4:30928344-30928363 | MS.gene23808:intron | 45.0% | |
| TTTGGAGAAAGCTGTGGATC+AGG | + | chr8.4:30927453-30927472 | MS.gene23808:CDS | 45.0% | |
| ! | CAAATGGCTTGCAAGGTTAG+AGG | + | chr8.4:30930637-30930656 | MS.gene23808:CDS | 45.0% |
| ! | CCTTATTTGCTCCAGGAACA+TGG | - | chr8.4:30926251-30926270 | None:intergenic | 45.0% |
| ! | GAATTTTGAGCTTGCCTTGG+AGG | + | chr8.4:30926170-30926189 | MS.gene23808:CDS | 45.0% |
| ! | GGAGAATTTTGAGCTTGCCT+TGG | + | chr8.4:30926167-30926186 | MS.gene23808:CDS | 45.0% |
| ! | TGGTCAGGAGCTTTTAAGCA+TGG | + | chr8.4:30928308-30928327 | MS.gene23808:intron | 45.0% |
| ! | TTTCCATAGGGCATCAGAGA+AGG | + | chr8.4:30927642-30927661 | MS.gene23808:CDS | 45.0% |
| !! | CAACCGATTTTACGGCTTTG+TGG | + | chr8.4:30929379-30929398 | MS.gene23808:intron | 45.0% |
| !! | TACACAGCCTTATTTGCTCC+AGG | - | chr8.4:30926258-30926277 | None:intergenic | 45.0% |
| !! | TGGCTAGTCTGCATGCAAAA+TGG | + | chr8.4:30927182-30927201 | MS.gene23808:intron | 45.0% |
| !!! | ATTTTTTCCGCCTTTTCCCC+TGG | + | chr8.4:30926858-30926877 | MS.gene23808:intron | 45.0% |
| !!! | TTTTAATATATATATATGTT+TGG | + | chr8.4:30927386-30927405 | MS.gene23808:intron | 5.0% |
| ACCTTCGGGATGAGAATGGT+TGG | + | chr8.4:30927162-30927181 | MS.gene23808:intron | 50.0% | |
| AGCTTGAAAGGAAGTGGGGA+TGG | - | chr8.4:30928839-30928858 | None:intergenic | 50.0% | |
| AGTCTGCATGCAAAATGGCC+TGG | + | chr8.4:30927187-30927206 | MS.gene23808:intron | 50.0% | |
| ATCGAGATCCTACCCAGGAT+CGG | + | chr8.4:30929062-30929081 | MS.gene23808:intron | 50.0% | |
| CATGCCATGCGAAAACTGTC+AGG | - | chr8.4:30927879-30927898 | None:intergenic | 50.0% | |
| CCCAATGCATACTGTGCATC+AGG | - | chr8.4:30926930-30926949 | None:intergenic | 50.0% | |
| GCAAAAGCAGGCTGTGATCT+TGG | + | chr8.4:30930611-30930630 | MS.gene23808:CDS | 50.0% | |
| GCTTGAAAGGAAGTGGGGAT+GGG | - | chr8.4:30928838-30928857 | None:intergenic | 50.0% | |
| GGCGTTGTGGTGTTTCCATA+GGG | + | chr8.4:30927630-30927649 | MS.gene23808:CDS | 50.0% | |
| GGTTAGAGGAGGAAGAGAAG+CGG | + | chr8.4:30930651-30930670 | MS.gene23808:CDS | 50.0% | |
| GTACTTGTAGGGACATGCTG+GGG | + | chr8.4:30928703-30928722 | MS.gene23808:intron | 50.0% | |
| GTATGCATGGAGGCCTTGAA+AGG | + | chr8.4:30928208-30928227 | MS.gene23808:intron | 50.0% | |
| GTCTGCATGCAAAATGGCCT+GGG | + | chr8.4:30927188-30927207 | MS.gene23808:intron | 50.0% | |
| GTGCAGCTTGAAAGGAAGTG+GGG | - | chr8.4:30928843-30928862 | None:intergenic | 50.0% | |
| TCAGAATCGAGATCCTACCC+AGG | + | chr8.4:30929057-30929076 | MS.gene23808:intron | 50.0% | |
| TGCAGAGAGGATTGCATAGC+AGG | + | chr8.4:30925927-30925946 | MS.gene23808:intron | 50.0% | |
| TTCTGCCTATGAGTGAGCTC+TGG | - | chr8.4:30929446-30929465 | None:intergenic | 50.0% | |
| ! | AAAGGAAGTGGGGATGGGTT+TGG | - | chr8.4:30928833-30928852 | None:intergenic | 50.0% |
| ! | AGGGTCAAATGTGGTTGGTC+AGG | + | chr8.4:30928293-30928312 | MS.gene23808:intron | 50.0% |
| ! | ATGGCTTGCAAGGTTAGAGG+AGG | + | chr8.4:30930640-30930659 | MS.gene23808:CDS | 50.0% |
| ! | CTGACAGTTTTCGCATGGCA+TGG | + | chr8.4:30927877-30927896 | MS.gene23808:intron | 50.0% |
| !! | ATTGGTGTTGTCAGCCTCCA+AGG | - | chr8.4:30926187-30926206 | None:intergenic | 50.0% |
| !! | GGTGGGTTGATTGCATCGTT+GGG | + | chr8.4:30930406-30930425 | MS.gene23808:intron | 50.0% |
| !! | TGGTGGGTTGATTGCATCGT+TGG | + | chr8.4:30930405-30930424 | MS.gene23808:intron | 50.0% |
| ATCCTACCCAGGATCGGGAA+GGG | + | chr8.4:30929068-30929087 | MS.gene23808:intron | 55.0% | |
| CAACAGAGCGGCAGCATTAC+TGG | + | chr8.4:30926881-30926900 | MS.gene23808:intron | 55.0% | |
| CACACTGGGAGGGTCAAATG+TGG | + | chr8.4:30928284-30928303 | MS.gene23808:intron | 55.0% | |
| CGGCGTTGTGGTGTTTCCAT+AGG | + | chr8.4:30927629-30927648 | MS.gene23808:CDS | 55.0% | |
| CTGGGAGGGTCAAATGTGGT+TGG | + | chr8.4:30928288-30928307 | MS.gene23808:intron | 55.0% | |
| GACCACATACTATCCCACCC+AGG | - | chr8.4:30927208-30927227 | None:intergenic | 55.0% | |
| GATTCGGCGAAAGGGTCATC+AGG | - | chr8.4:30928384-30928403 | None:intergenic | 55.0% | |
| GCATGCAAAATGGCCTGGGT+GGG | + | chr8.4:30927192-30927211 | MS.gene23808:intron | 55.0% | |
| GCCAACCATTCTCATCCCGA+AGG | - | chr8.4:30927166-30927185 | None:intergenic | 55.0% | |
| GCTGGGGCAGCTATTGCATA+TGG | + | chr8.4:30928719-30928738 | MS.gene23808:CDS | 55.0% | |
| TCGAGATCCTACCCAGGATC+GGG | + | chr8.4:30929063-30929082 | MS.gene23808:intron | 55.0% | |
| TCTGTTGCCAGGGGAAAAGG+CGG | - | chr8.4:30926868-30926887 | None:intergenic | 55.0% | |
| TGCATGCAAAATGGCCTGGG+TGG | + | chr8.4:30927191-30927210 | MS.gene23808:intron | 55.0% | |
| ! | CGCACCTGACAGTTTTCGCA+TGG | + | chr8.4:30927872-30927891 | MS.gene23808:intron | 55.0% |
| ! | CTTTTCCCCTGGCAACAGAG+CGG | + | chr8.4:30926869-30926888 | MS.gene23808:intron | 55.0% |
| ! | TGGGGATGGGTTTGGATGCA+TGG | - | chr8.4:30928825-30928844 | None:intergenic | 55.0% |
| AATGCTGCCGCTCTGTTGCC+AGG | - | chr8.4:30926879-30926898 | None:intergenic | 60.0% | |
| ATGCTGCCGCTCTGTTGCCA+GGG | - | chr8.4:30926878-30926897 | None:intergenic | 60.0% | |
| CCTCGCCAGAGCTCACTCAT+AGG | + | chr8.4:30929438-30929457 | MS.gene23808:intron | 60.0% | |
| CGCTCTGTTGCCAGGGGAAA+AGG | - | chr8.4:30926871-30926890 | None:intergenic | 60.0% | |
| GATCCTACCCAGGATCGGGA+AGG | + | chr8.4:30929067-30929086 | MS.gene23808:intron | 60.0% | |
| GGCCTGGGTGGGATAGTATG+TGG | + | chr8.4:30927203-30927222 | MS.gene23808:intron | 60.0% | |
| GGTGCACCTGCTCAAATGCG+AGG | + | chr8.4:30930524-30930543 | MS.gene23808:CDS | 60.0% | |
| TCCTACCCAGGATCGGGAAG+GGG | + | chr8.4:30929069-30929088 | MS.gene23808:intron | 60.0% | |
| ! | CCTATGAGTGAGCTCTGGCG+AGG | - | chr8.4:30929441-30929460 | None:intergenic | 60.0% |
| ! | GGGGGCACAGGATCGTATCA+TGG | + | chr8.4:30929088-30929107 | MS.gene23808:intron | 60.0% |
| CCTACCCAGGATCGGGAAGG+GGG | + | chr8.4:30929070-30929089 | MS.gene23808:intron | 65.0% | |
| TGCTGCCGCTCTGTTGCCAG+GGG | - | chr8.4:30926877-30926896 | None:intergenic | 65.0% | |
| TGTGCCCCCTTCCCGATCCT+GGG | - | chr8.4:30929077-30929096 | None:intergenic | 65.0% | |
| CCCCCTTCCCGATCCTGGGT+AGG | - | chr8.4:30929073-30929092 | None:intergenic | 70.0% | |
| CTGTGCCCCCTTCCCGATCC+TGG | - | chr8.4:30929078-30929097 | None:intergenic | 70.0% | |
| GCGGTCGGGAACACGCAACC+TGG | - | chr8.4:30929321-30929340 | None:intergenic | 70.0% | |
| ! | CAGGATCGGGAAGGGGGCAC+AGG | + | chr8.4:30929076-30929095 | MS.gene23808:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 30925782 | 30930694 | 30925782 | ID=MS.gene23808 |
| chr8.4 | mRNA | 30925782 | 30930694 | 30925782 | ID=MS.gene23808.t1;Parent=MS.gene23808 |
| chr8.4 | exon | 30925782 | 30925820 | 30925782 | ID=MS.gene23808.t1.exon1;Parent=MS.gene23808.t1 |
| chr8.4 | CDS | 30925782 | 30925820 | 30925782 | ID=cds.MS.gene23808.t1;Parent=MS.gene23808.t1 |
| chr8.4 | exon | 30925932 | 30926060 | 30925932 | ID=MS.gene23808.t1.exon2;Parent=MS.gene23808.t1 |
| chr8.4 | CDS | 30925932 | 30926060 | 30925932 | ID=cds.MS.gene23808.t1;Parent=MS.gene23808.t1 |
| chr8.4 | exon | 30926159 | 30926274 | 30926159 | ID=MS.gene23808.t1.exon3;Parent=MS.gene23808.t1 |
| chr8.4 | CDS | 30926159 | 30926274 | 30926159 | ID=cds.MS.gene23808.t1;Parent=MS.gene23808.t1 |
| chr8.4 | exon | 30926887 | 30926968 | 30926887 | ID=MS.gene23808.t1.exon4;Parent=MS.gene23808.t1 |
| chr8.4 | CDS | 30926887 | 30926968 | 30926887 | ID=cds.MS.gene23808.t1;Parent=MS.gene23808.t1 |
| chr8.4 | exon | 30927415 | 30927474 | 30927415 | ID=MS.gene23808.t1.exon5;Parent=MS.gene23808.t1 |
| chr8.4 | CDS | 30927415 | 30927474 | 30927415 | ID=cds.MS.gene23808.t1;Parent=MS.gene23808.t1 |
| chr8.4 | exon | 30927556 | 30927663 | 30927556 | ID=MS.gene23808.t1.exon6;Parent=MS.gene23808.t1 |
| chr8.4 | CDS | 30927556 | 30927663 | 30927556 | ID=cds.MS.gene23808.t1;Parent=MS.gene23808.t1 |
| chr8.4 | exon | 30928713 | 30928758 | 30928713 | ID=MS.gene23808.t1.exon7;Parent=MS.gene23808.t1 |
| chr8.4 | CDS | 30928713 | 30928758 | 30928713 | ID=cds.MS.gene23808.t1;Parent=MS.gene23808.t1 |
| chr8.4 | exon | 30930480 | 30930694 | 30930480 | ID=MS.gene23808.t1.exon8;Parent=MS.gene23808.t1 |
| chr8.4 | CDS | 30930480 | 30930694 | 30930480 | ID=cds.MS.gene23808.t1;Parent=MS.gene23808.t1 |
| Gene Sequence |
| Protein sequence |
