Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051633.t1 | XP_003589035.2 | 88.2 | 263 | 28 | 2 | 1 | 261 | 1 | 262 | 5.40E-111 | 410.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051633.t1 | G7IBA2 | 88.2 | 263 | 28 | 2 | 1 | 261 | 1 | 262 | 3.9e-111 | 410.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050277 | MS.gene051633 | 0.852951 | 3.30E-61 | -1.69E-46 |
| MS.gene050303 | MS.gene051633 | 0.817165 | 3.80E-52 | -1.69E-46 |
| MS.gene051063 | MS.gene051633 | 0.823058 | 1.70E-53 | -1.69E-46 |
| MS.gene051245 | MS.gene051633 | 0.818695 | 1.71E-52 | -1.69E-46 |
| MS.gene051349 | MS.gene051633 | 0.809324 | 2.00E-50 | -1.69E-46 |
| MS.gene051451 | MS.gene051633 | 0.815403 | 9.41E-52 | -1.69E-46 |
| MS.gene051633 | MS.gene051746 | 0.812167 | 4.86E-51 | -1.69E-46 |
| MS.gene051633 | MS.gene051748 | 0.800391 | 1.47E-48 | -1.69E-46 |
| MS.gene051633 | MS.gene051903 | 0.821147 | 4.71E-53 | -1.69E-46 |
| MS.gene051633 | MS.gene052176 | 0.817439 | 3.30E-52 | -1.69E-46 |
| MS.gene051633 | MS.gene052286 | 0.840535 | 8.20E-58 | -1.69E-46 |
| MS.gene051633 | MS.gene052302 | 0.849063 | 4.11E-60 | -1.69E-46 |
| MS.gene051633 | MS.gene052309 | -0.832265 | 1.04E-55 | -1.69E-46 |
| MS.gene051633 | MS.gene052376 | 0.851884 | 6.63E-61 | -1.69E-46 |
| MS.gene051633 | MS.gene052856 | 0.801316 | 9.54E-49 | -1.69E-46 |
| MS.gene051633 | MS.gene052947 | 0.806048 | 9.94E-50 | -1.69E-46 |
| MS.gene051633 | MS.gene056601 | 0.81173 | 6.05E-51 | -1.69E-46 |
| MS.gene051633 | MS.gene056631 | 0.844563 | 6.99E-59 | -1.69E-46 |
| MS.gene051633 | MS.gene057057 | 0.800204 | 1.61E-48 | -1.69E-46 |
| MS.gene051633 | MS.gene057079 | 0.845637 | 3.59E-59 | -1.69E-46 |
| MS.gene051633 | MS.gene057140 | 0.826946 | 2.05E-54 | -1.69E-46 |
| MS.gene051633 | MS.gene057234 | 0.837794 | 4.21E-57 | -1.69E-46 |
| MS.gene051633 | MS.gene057555 | 0.807266 | 5.50E-50 | -1.69E-46 |
| MS.gene051633 | MS.gene05795 | 0.81378 | 2.15E-51 | -1.69E-46 |
| MS.gene051633 | MS.gene058055 | 0.804337 | 2.27E-49 | -1.69E-46 |
| MS.gene051633 | MS.gene058200 | 0.80683 | 6.80E-50 | -1.69E-46 |
| MS.gene051633 | MS.gene058201 | 0.800716 | 1.27E-48 | -1.69E-46 |
| MS.gene051633 | MS.gene058238 | 0.838001 | 3.73E-57 | -1.69E-46 |
| MS.gene051633 | MS.gene058798 | 0.80771 | 4.42E-50 | -1.69E-46 |
| MS.gene051633 | MS.gene058906 | 0.853477 | 2.33E-61 | -1.69E-46 |
| MS.gene051633 | MS.gene059898 | 0.806038 | 9.99E-50 | -1.69E-46 |
| MS.gene051633 | MS.gene06001 | 0.840828 | 6.87E-58 | -1.69E-46 |
| MS.gene051633 | MS.gene060165 | 0.826327 | 2.88E-54 | -1.69E-46 |
| MS.gene051633 | MS.gene060297 | 0.801155 | 1.03E-48 | -1.69E-46 |
| MS.gene051633 | MS.gene060586 | 0.805647 | 1.21E-49 | -1.69E-46 |
| MS.gene051633 | MS.gene060619 | 0.823845 | 1.11E-53 | -1.69E-46 |
| MS.gene051633 | MS.gene06172 | 0.818457 | 1.94E-52 | -1.69E-46 |
| MS.gene051633 | MS.gene062352 | 0.820256 | 7.55E-53 | -1.69E-46 |
| MS.gene051633 | MS.gene063119 | 0.835388 | 1.73E-56 | -1.69E-46 |
| MS.gene051633 | MS.gene063494 | 0.800064 | 1.72E-48 | -1.69E-46 |
| MS.gene051633 | MS.gene063917 | 0.836431 | 9.40E-57 | -1.69E-46 |
| MS.gene051633 | MS.gene064071 | 0.842366 | 2.70E-58 | -1.69E-46 |
| MS.gene051633 | MS.gene064072 | 0.839529 | 1.50E-57 | -1.69E-46 |
| MS.gene051633 | MS.gene064459 | 0.810083 | 1.37E-50 | -1.69E-46 |
| MS.gene051633 | MS.gene065378 | 0.82339 | 1.42E-53 | -1.69E-46 |
| MS.gene051633 | MS.gene06594 | 0.813735 | 2.20E-51 | -1.69E-46 |
| MS.gene051633 | MS.gene06667 | 0.885416 | 8.29E-72 | -1.69E-46 |
| MS.gene051633 | MS.gene067521 | 0.822685 | 2.08E-53 | -1.69E-46 |
| MS.gene051633 | MS.gene067746 | 0.819352 | 1.21E-52 | -1.69E-46 |
| MS.gene051633 | MS.gene06806 | 0.819084 | 1.40E-52 | -1.69E-46 |
| MS.gene051633 | MS.gene06837 | 0.814223 | 1.72E-51 | -1.69E-46 |
| MS.gene051633 | MS.gene068549 | 0.843007 | 1.83E-58 | -1.69E-46 |
| MS.gene051633 | MS.gene068553 | 0.821627 | 3.65E-53 | -1.69E-46 |
| MS.gene051633 | MS.gene06865 | 0.820474 | 6.73E-53 | -1.69E-46 |
| MS.gene051633 | MS.gene068695 | 0.811356 | 7.29E-51 | -1.69E-46 |
| MS.gene051633 | MS.gene06883 | 0.863753 | 1.99E-64 | -1.69E-46 |
| MS.gene051633 | MS.gene069310 | 0.815653 | 8.28E-52 | -1.69E-46 |
| MS.gene051633 | MS.gene06957 | 0.801381 | 9.25E-49 | -1.69E-46 |
| MS.gene051633 | MS.gene06989 | 0.847456 | 1.14E-59 | -1.69E-46 |
| MS.gene051633 | MS.gene070222 | 0.815483 | 9.04E-52 | -1.69E-46 |
| MS.gene051633 | MS.gene07089 | 0.829883 | 4.01E-55 | -1.69E-46 |
| MS.gene051633 | MS.gene071290 | 0.822977 | 1.77E-53 | -1.69E-46 |
| MS.gene051633 | MS.gene071711 | -0.807368 | 5.23E-50 | -1.69E-46 |
| MS.gene051633 | MS.gene07217 | 0.84059 | 7.93E-58 | -1.69E-46 |
| MS.gene051633 | MS.gene07222 | 0.805696 | 1.18E-49 | -1.69E-46 |
| MS.gene051633 | MS.gene073003 | 0.807468 | 4.98E-50 | -1.69E-46 |
| MS.gene051633 | MS.gene073332 | 0.83115 | 1.97E-55 | -1.69E-46 |
| MS.gene051633 | MS.gene073564 | 0.837607 | 4.70E-57 | -1.69E-46 |
| MS.gene051633 | MS.gene07368 | 0.83118 | 1.93E-55 | -1.69E-46 |
| MS.gene051633 | MS.gene073785 | 0.826797 | 2.23E-54 | -1.69E-46 |
| MS.gene051633 | MS.gene073827 | 0.825812 | 3.82E-54 | -1.69E-46 |
| MS.gene051633 | MS.gene073833 | 0.837227 | 5.89E-57 | -1.69E-46 |
| MS.gene051633 | MS.gene074465 | 0.844741 | 6.27E-59 | -1.69E-46 |
| MS.gene051633 | MS.gene074584 | 0.802669 | 5.03E-49 | -1.69E-46 |
| MS.gene051633 | MS.gene08427 | 0.801655 | 8.13E-49 | -1.69E-46 |
| MS.gene051633 | MS.gene08428 | 0.818191 | 2.23E-52 | -1.69E-46 |
| MS.gene051633 | MS.gene08545 | 0.830775 | 2.43E-55 | -1.69E-46 |
| MS.gene051633 | MS.gene09032 | 0.84164 | 4.20E-58 | -1.69E-46 |
| MS.gene051633 | MS.gene20302 | 0.800078 | 1.71E-48 | -1.69E-46 |
| MS.gene051633 | MS.gene20740 | 0.803708 | 3.06E-49 | -1.69E-46 |
| MS.gene051633 | MS.gene20912 | 0.806004 | 1.02E-49 | -1.69E-46 |
| MS.gene051633 | MS.gene21659 | 0.82919 | 5.91E-55 | -1.69E-46 |
| MS.gene051633 | MS.gene22314 | 0.834691 | 2.59E-56 | -1.69E-46 |
| MS.gene051633 | MS.gene22968 | 0.848888 | 4.60E-60 | -1.69E-46 |
| MS.gene051633 | MS.gene22983 | 0.831627 | 1.50E-55 | -1.69E-46 |
| MS.gene051633 | MS.gene23058 | 0.81042 | 1.16E-50 | -1.69E-46 |
| MS.gene051633 | MS.gene23059 | 0.848194 | 7.16E-60 | -1.69E-46 |
| MS.gene051633 | MS.gene23491 | 0.810639 | 1.04E-50 | -1.69E-46 |
| MS.gene051633 | MS.gene23808 | 0.806246 | 9.03E-50 | -1.69E-46 |
| MS.gene051633 | MS.gene23954 | 0.835684 | 1.45E-56 | -1.69E-46 |
| MS.gene051633 | MS.gene24539 | 0.967186 | 6.23E-127 | -1.69E-46 |
| MS.gene051633 | MS.gene24692 | 0.851816 | 6.94E-61 | -1.69E-46 |
| MS.gene051633 | MS.gene25077 | 0.834738 | 2.52E-56 | -1.69E-46 |
| MS.gene051633 | MS.gene25475 | 0.820984 | 5.14E-53 | -1.69E-46 |
| MS.gene051633 | MS.gene27991 | 0.849588 | 2.94E-60 | -1.69E-46 |
| MS.gene051633 | MS.gene28218 | 0.818144 | 2.28E-52 | -1.69E-46 |
| MS.gene051633 | MS.gene28751 | 0.800863 | 1.18E-48 | -1.69E-46 |
| MS.gene051633 | MS.gene28922 | -0.823265 | 1.52E-53 | -1.69E-46 |
| MS.gene051633 | MS.gene28929 | 0.808824 | 2.56E-50 | -1.69E-46 |
| MS.gene051633 | MS.gene28943 | 0.819901 | 9.11E-53 | -1.69E-46 |
| MS.gene051633 | MS.gene29053 | -0.802081 | 6.64E-49 | -1.69E-46 |
| MS.gene051633 | MS.gene30855 | 0.852944 | 3.31E-61 | -1.69E-46 |
| MS.gene051633 | MS.gene31235 | 0.802897 | 4.51E-49 | -1.69E-46 |
| MS.gene051633 | MS.gene32971 | 0.813087 | 3.06E-51 | -1.69E-46 |
| MS.gene051633 | MS.gene33160 | 0.826165 | 3.15E-54 | -1.69E-46 |
| MS.gene051633 | MS.gene33907 | 0.806416 | 8.31E-50 | -1.69E-46 |
| MS.gene051633 | MS.gene34085 | 0.806745 | 7.09E-50 | -1.69E-46 |
| MS.gene051633 | MS.gene35214 | 0.8755 | 2.94E-68 | -1.69E-46 |
| MS.gene051633 | MS.gene35909 | 0.800025 | 1.75E-48 | -1.69E-46 |
| MS.gene051633 | MS.gene35910 | 0.803951 | 2.73E-49 | -1.69E-46 |
| MS.gene051633 | MS.gene36146 | 0.80623 | 9.10E-50 | -1.69E-46 |
| MS.gene051633 | MS.gene36245 | 0.84196 | 3.46E-58 | -1.69E-46 |
| MS.gene051633 | MS.gene36468 | 0.804447 | 2.15E-49 | -1.69E-46 |
| MS.gene051633 | MS.gene36568 | 0.806696 | 7.26E-50 | -1.69E-46 |
| MS.gene051633 | MS.gene40648 | 0.842498 | 2.49E-58 | -1.69E-46 |
| MS.gene051633 | MS.gene41171 | 0.801644 | 8.17E-49 | -1.69E-46 |
| MS.gene051633 | MS.gene41455 | 0.841743 | 3.95E-58 | -1.69E-46 |
| MS.gene051633 | MS.gene42751 | 0.824546 | 7.61E-54 | -1.69E-46 |
| MS.gene051633 | MS.gene43491 | 0.844001 | 9.91E-59 | -1.69E-46 |
| MS.gene051633 | MS.gene43537 | 0.804555 | 2.04E-49 | -1.69E-46 |
| MS.gene051633 | MS.gene43602 | 0.82928 | 5.62E-55 | -1.69E-46 |
| MS.gene051633 | MS.gene43862 | 0.81751 | 3.18E-52 | -1.69E-46 |
| MS.gene051633 | MS.gene43992 | 0.820275 | 7.48E-53 | -1.69E-46 |
| MS.gene051633 | MS.gene45578 | 0.823004 | 1.75E-53 | -1.69E-46 |
| MS.gene051633 | MS.gene47955 | 0.848584 | 5.58E-60 | -1.69E-46 |
| MS.gene051633 | MS.gene48059 | 0.821453 | 4.01E-53 | -1.69E-46 |
| MS.gene051633 | MS.gene48326 | 0.802892 | 4.52E-49 | -1.69E-46 |
| MS.gene051633 | MS.gene48435 | 0.818858 | 1.57E-52 | -1.69E-46 |
| MS.gene051633 | MS.gene49203 | 0.805133 | 1.55E-49 | -1.69E-46 |
| MS.gene051633 | MS.gene50217 | 0.822312 | 2.53E-53 | -1.69E-46 |
| MS.gene051633 | MS.gene51419 | 0.814962 | 1.18E-51 | -1.69E-46 |
| MS.gene051633 | MS.gene51658 | 0.800988 | 1.11E-48 | -1.69E-46 |
| MS.gene051633 | MS.gene53383 | 0.807272 | 5.48E-50 | -1.69E-46 |
| MS.gene051633 | MS.gene54221 | 0.820484 | 6.69E-53 | -1.69E-46 |
| MS.gene051633 | MS.gene55732 | 0.835483 | 1.63E-56 | -1.69E-46 |
| MS.gene051633 | MS.gene55988 | 0.807873 | 4.09E-50 | -1.69E-46 |
| MS.gene051633 | MS.gene57210 | 0.80418 | 2.44E-49 | -1.69E-46 |
| MS.gene051633 | MS.gene59769 | 0.814228 | 1.71E-51 | -1.69E-46 |
| MS.gene051633 | MS.gene59876 | 0.817509 | 3.18E-52 | -1.69E-46 |
| MS.gene051633 | MS.gene60717 | 0.802335 | 5.89E-49 | -1.69E-46 |
| MS.gene051633 | MS.gene61074 | 0.808332 | 3.26E-50 | -1.69E-46 |
| MS.gene051633 | MS.gene61183 | 0.805447 | 1.33E-49 | -1.69E-46 |
| MS.gene051633 | MS.gene61543 | 0.829909 | 3.95E-55 | -1.69E-46 |
| MS.gene051633 | MS.gene62558 | 0.812891 | 3.37E-51 | -1.69E-46 |
| MS.gene051633 | MS.gene63893 | 0.82161 | 3.68E-53 | -1.69E-46 |
| MS.gene051633 | MS.gene63927 | 0.803973 | 2.70E-49 | -1.69E-46 |
| MS.gene051633 | MS.gene64243 | 0.811418 | 7.07E-51 | -1.69E-46 |
| MS.gene051633 | MS.gene65412 | 0.808064 | 3.72E-50 | -1.69E-46 |
| MS.gene051633 | MS.gene65650 | 0.820876 | 5.44E-53 | -1.69E-46 |
| MS.gene051633 | MS.gene66474 | 0.809167 | 2.16E-50 | -1.69E-46 |
| MS.gene051633 | MS.gene67884 | 0.840205 | 1.00E-57 | -1.69E-46 |
| MS.gene051633 | MS.gene68171 | 0.836172 | 1.09E-56 | -1.69E-46 |
| MS.gene051633 | MS.gene68810 | 0.836941 | 6.97E-57 | -1.69E-46 |
| MS.gene051633 | MS.gene68840 | 0.813511 | 2.47E-51 | -1.69E-46 |
| MS.gene051633 | MS.gene68873 | 0.800952 | 1.13E-48 | -1.69E-46 |
| MS.gene051633 | MS.gene69262 | 0.850553 | 1.58E-60 | -1.69E-46 |
| MS.gene051633 | MS.gene69388 | 0.805549 | 1.27E-49 | -1.69E-46 |
| MS.gene051633 | MS.gene69947 | 0.830218 | 3.32E-55 | -1.69E-46 |
| MS.gene051633 | MS.gene70613 | 0.80417 | 2.46E-49 | -1.69E-46 |
| MS.gene051633 | MS.gene71949 | 0.826812 | 2.21E-54 | -1.69E-46 |
| MS.gene051633 | MS.gene72099 | 0.835588 | 1.54E-56 | -1.69E-46 |
| MS.gene051633 | MS.gene72128 | 0.812373 | 4.38E-51 | -1.69E-46 |
| MS.gene051633 | MS.gene72130 | 0.816908 | 4.34E-52 | -1.69E-46 |
| MS.gene051633 | MS.gene72735 | 0.835929 | 1.26E-56 | -1.69E-46 |
| MS.gene051633 | MS.gene73877 | 0.807323 | 5.35E-50 | -1.69E-46 |
| MS.gene051633 | MS.gene73879 | 0.804559 | 2.04E-49 | -1.69E-46 |
| MS.gene051633 | MS.gene74076 | 0.80067 | 1.29E-48 | -1.69E-46 |
| MS.gene051633 | MS.gene75477 | 0.808886 | 2.48E-50 | -1.69E-46 |
| MS.gene051633 | MS.gene75923 | 0.823009 | 1.74E-53 | -1.69E-46 |
| MS.gene051633 | MS.gene76035 | 0.822092 | 2.85E-53 | -1.69E-46 |
| MS.gene051633 | MS.gene80795 | 0.806722 | 7.17E-50 | -1.69E-46 |
| MS.gene051633 | MS.gene81361 | 0.805759 | 1.14E-49 | -1.69E-46 |
| MS.gene051633 | MS.gene82040 | 0.812275 | 4.60E-51 | -1.69E-46 |
| MS.gene051633 | MS.gene82827 | 0.823015 | 1.74E-53 | -1.69E-46 |
| MS.gene051633 | MS.gene83217 | 0.803979 | 2.69E-49 | -1.69E-46 |
| MS.gene051633 | MS.gene83495 | 0.829849 | 4.09E-55 | -1.69E-46 |
| MS.gene051633 | MS.gene84040 | 0.812777 | 3.57E-51 | -1.69E-46 |
| MS.gene051633 | MS.gene84455 | 0.822658 | 2.11E-53 | -1.69E-46 |
| MS.gene051633 | MS.gene86265 | 0.808472 | 3.05E-50 | -1.69E-46 |
| MS.gene051633 | MS.gene86350 | 0.847579 | 1.06E-59 | -1.69E-46 |
| MS.gene051633 | MS.gene86380 | 0.826051 | 3.35E-54 | -1.69E-46 |
| MS.gene051633 | MS.gene86381 | 0.802583 | 5.24E-49 | -1.69E-46 |
| MS.gene051633 | MS.gene86392 | 0.830074 | 3.60E-55 | -1.69E-46 |
| MS.gene051633 | MS.gene86678 | 0.809218 | 2.11E-50 | -1.69E-46 |
| MS.gene051633 | MS.gene87285 | 0.814022 | 1.90E-51 | -1.69E-46 |
| MS.gene051633 | MS.gene88229 | 0.836152 | 1.11E-56 | -1.69E-46 |
| MS.gene051633 | MS.gene88371 | 0.829016 | 6.52E-55 | -1.69E-46 |
| MS.gene051633 | MS.gene89027 | 0.826045 | 3.37E-54 | -1.69E-46 |
| MS.gene051633 | MS.gene89562 | 0.818434 | 1.96E-52 | -1.69E-46 |
| MS.gene051633 | MS.gene89721 | 0.833925 | 4.03E-56 | -1.69E-46 |
| MS.gene051633 | MS.gene90862 | 0.830357 | 3.07E-55 | -1.69E-46 |
| MS.gene051633 | MS.gene91197 | 0.801407 | 9.14E-49 | -1.69E-46 |
| MS.gene051633 | MS.gene91622 | 0.819859 | 9.31E-53 | -1.69E-46 |
| MS.gene051633 | MS.gene92548 | 0.808931 | 2.43E-50 | -1.69E-46 |
| MS.gene051633 | MS.gene92849 | 0.802323 | 5.93E-49 | -1.69E-46 |
| MS.gene051633 | MS.gene93202 | 0.818943 | 1.51E-52 | -1.69E-46 |
| MS.gene051633 | MS.gene94539 | 0.815993 | 6.95E-52 | -1.69E-46 |
| MS.gene051633 | MS.gene95039 | 0.835544 | 1.58E-56 | -1.69E-46 |
| MS.gene051633 | MS.gene96322 | 0.823525 | 1.32E-53 | -1.69E-46 |
| MS.gene051633 | MS.gene97008 | 0.817899 | 2.59E-52 | -1.69E-46 |
| MS.gene051633 | MS.gene97738 | 0.807367 | 5.23E-50 | -1.69E-46 |
| MS.gene051633 | MS.gene98141 | 0.819833 | 9.44E-53 | -1.69E-46 |
| MS.gene051633 | MS.gene98277 | 0.813091 | 3.05E-51 | -1.69E-46 |
| MS.gene051633 | MS.gene99313 | 0.83662 | 8.41E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051633.t1 | MTR_1g016630 | 88.973 | 263 | 26 | 2 | 1 | 261 | 1 | 262 | 1.17e-154 | 431 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene051633.t1 | AT3G20430 | 49.627 | 268 | 118 | 7 | 1 | 259 | 1 | 260 | 2.37e-69 | 215 |
Find 45 sgRNAs with CRISPR-Local
Find 288 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCTGATGGTAAGCGATTT+CGG | 0.295356 | 1.3:+5681212 | MS.gene051633:CDS |
| ATTATCTCTTTGTAAGCATT+TGG | 0.296419 | 1.3:-5681277 | None:intergenic |
| TAATAATACAGAAGCAATTC+AGG | 0.298572 | 1.3:+5682035 | MS.gene051633:intron |
| CGGCGACACCGTTTCGATTA+TGG | 0.307561 | 1.3:-5677698 | None:intergenic |
| AAGAGAAAGAGAAAGGCTTT+AGG | 0.415930 | 1.3:+5677813 | MS.gene051633:CDS |
| ATTCTTAATCTGTCATGAAC+AGG | 0.445504 | 1.3:-5682223 | None:intergenic |
| TGATGTTGAAGAGGGTGAAT+TGG | 0.447652 | 1.3:+5677656 | MS.gene051633:CDS |
| AGATCATCATCATAGGAAAC+AGG | 0.457123 | 1.3:-5682247 | None:intergenic |
| ATACAGCTGTAGGTTGCCTT+GGG | 0.458577 | 1.3:+5678195 | MS.gene051633:CDS |
| TCCTATGATGATGATCTGCT+TGG | 0.462050 | 1.3:+5682253 | MS.gene051633:CDS |
| TATACAGCTGTAGGTTGCCT+TGG | 0.468657 | 1.3:+5678194 | MS.gene051633:CDS |
| AAGAAACCTGTCAATGTTGA+TGG | 0.484273 | 1.3:-5677850 | None:intergenic |
| ATGCACCCATCAACATTGAC+AGG | 0.486157 | 1.3:+5677844 | MS.gene051633:CDS |
| GCTTACCATCAGCAGTCTGC+TGG | 0.494811 | 1.3:-5681204 | None:intergenic |
| TGGAATTTGGGCATGGAGGG+TGG | 0.498961 | 1.3:+5677582 | None:intergenic |
| AGCAGTCTGCTGGCCTCCAC+AGG | 0.505033 | 1.3:-5681194 | None:intergenic |
| GTTTGGAATTTGGGCATGGA+GGG | 0.508864 | 1.3:+5677579 | None:intergenic |
| GATGGTAAGCGATTTCGGAC+AGG | 0.509601 | 1.3:+5681217 | MS.gene051633:CDS |
| TCCAAGCAGATCATCATCAT+AGG | 0.511312 | 1.3:-5682254 | None:intergenic |
| CAAGATCAAGATAAACCGCC+AGG | 0.529708 | 1.3:+5682181 | MS.gene051633:CDS |
| GAGAAAGGCTTTAGGAGGAT+CGG | 0.532126 | 1.3:+5677821 | MS.gene051633:CDS |
| ATGGATGCCTGCTTAAAACT+TGG | 0.535810 | 1.3:-5682061 | None:intergenic |
| ATGGTAAGCGATTTCGGACA+GGG | 0.567855 | 1.3:+5681218 | MS.gene051633:CDS |
| CGAAGAAGACGATGTTGAGA+TGG | 0.574522 | 1.3:+5677632 | MS.gene051633:CDS |
| GAACAAGACCATAATCGAAA+CGG | 0.575699 | 1.3:+5677690 | MS.gene051633:CDS |
| CGCTCAACGCAGAAATCCCA+AGG | 0.577857 | 1.3:-5678211 | None:intergenic |
| AGAAAGAGAAAGGCTTTAGG+AGG | 0.581783 | 1.3:+5677816 | MS.gene051633:CDS |
| TGCATTTGCGATGCGCAAGT+AGG | 0.587168 | 1.3:-5682160 | None:intergenic |
| AAACGGTGTCGCCGCCACAC+AGG | 0.597293 | 1.3:+5677707 | MS.gene051633:CDS |
| AGAGGAGGATTCTTCTCAAG+AGG | 0.611513 | 1.3:+5682090 | MS.gene051633:CDS |
| GGTTTGTGATAGAGACATGT+CGG | 0.623578 | 1.3:+5678141 | MS.gene051633:intron |
| GAGATGGTTGATGTTGAAGA+GGG | 0.630707 | 1.3:+5677648 | MS.gene051633:CDS |
| GGAGGCCAGCAGACTGCTGA+TGG | 0.631237 | 1.3:+5681199 | MS.gene051633:CDS |
| TGAGATGGTTGATGTTGAAG+AGG | 0.639578 | 1.3:+5677647 | MS.gene051633:CDS |
| GGTAAGCGATTTCGGACAGG+GGG | 0.641482 | 1.3:+5681220 | MS.gene051633:CDS |
| AAGTAGGATTGTCAGAAACA+TGG | 0.643430 | 1.3:-5682144 | None:intergenic |
| AGAAACCTGTCAATGTTGAT+GGG | 0.647666 | 1.3:-5677849 | None:intergenic |
| GTTGAGCGATATCGTCAAAG+AGG | 0.648067 | 1.3:+5678226 | MS.gene051633:CDS |
| TACATGGTATATACAGCTGT+AGG | 0.664112 | 1.3:+5678185 | MS.gene051633:CDS |
| GACGCAATACAGTCCTGTGG+AGG | 0.666430 | 1.3:+5681181 | MS.gene051633:CDS |
| TGCGCACTAGAAAATGTACA+AGG | 0.667493 | 1.3:-5682115 | None:intergenic |
| TGGTAAGCGATTTCGGACAG+GGG | 0.706451 | 1.3:+5681219 | MS.gene051633:CDS |
| GTAGACGCAATACAGTCCTG+TGG | 0.714054 | 1.3:+5681178 | MS.gene051633:CDS |
| GAGATTATGATCCTGTGTGG+CGG | 0.728683 | 1.3:-5677718 | None:intergenic |
| AATGAGATTATGATCCTGTG+TGG | 0.779299 | 1.3:-5677721 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATGTGTATAAAATTAAATAT+TGG | - | chr1.3:5680471-5680490 | None:intergenic | 10.0% |
| !! | GTATTATCAATATAATTATT+CGG | + | chr1.3:5679457-5679476 | MS.gene051633:intron | 10.0% |
| !! | TAAATAAATCATGAAATATA+AGG | - | chr1.3:5679339-5679358 | None:intergenic | 10.0% |
| !! | TATTTCATGATTTATTTAAT+AGG | + | chr1.3:5679341-5679360 | MS.gene051633:intron | 10.0% |
| !!! | TTTAACATTTTAATTTTTTC+TGG | + | chr1.3:5680636-5680655 | MS.gene051633:intron | 10.0% |
| !! | AATAAAGGGAAATTATTAAA+AGG | - | chr1.3:5680189-5680208 | None:intergenic | 15.0% |
| !! | AATATAATGCACTAATAATT+AGG | - | chr1.3:5678478-5678497 | None:intergenic | 15.0% |
| !! | GATATCTTATTGAAATAATA+AGG | - | chr1.3:5679517-5679536 | None:intergenic | 15.0% |
| !! | GTTAAATTCTTATAAAACAA+AGG | - | chr1.3:5680622-5680641 | None:intergenic | 15.0% |
| !! | TAAAATTAATACCAGAAAAA+TGG | + | chr1.3:5681746-5681765 | MS.gene051633:intron | 15.0% |
| !! | TAGTGCATTATATTATTAAT+TGG | + | chr1.3:5678484-5678503 | MS.gene051633:intron | 15.0% |
| !!! | AGAGTATTTGAATTATATTT+TGG | + | chr1.3:5679296-5679315 | MS.gene051633:intron | 15.0% |
| !!! | GAGTATTTGAATTATATTTT+GGG | + | chr1.3:5679297-5679316 | MS.gene051633:intron | 15.0% |
| !!! | TATTTAGGAAAATTCAATTT+TGG | - | chr1.3:5680546-5680565 | None:intergenic | 15.0% |
| !! | AAATAATATTTGAATGACCT+TGG | - | chr1.3:5681966-5681985 | None:intergenic | 20.0% |
| !! | AATAATTTCCCTTTATTGAT+GGG | + | chr1.3:5680192-5680211 | MS.gene051633:intron | 20.0% |
| !! | AATTTCATTACAGTTATAGA+AGG | + | chr1.3:5680595-5680614 | MS.gene051633:intron | 20.0% |
| !! | AGAATTACAAAATCAGTATT+AGG | - | chr1.3:5678829-5678848 | None:intergenic | 20.0% |
| !! | AGAGTAATGATTAAATGTAA+TGG | - | chr1.3:5678058-5678077 | None:intergenic | 20.0% |
| !! | ATCTAAGGAAAAAAACAATA+TGG | - | chr1.3:5679765-5679784 | None:intergenic | 20.0% |
| !! | ATTATACTCTTCATAAATCA+TGG | + | chr1.3:5680998-5681017 | MS.gene051633:intron | 20.0% |
| !! | CCAAAATTCATAACAAAAAA+TGG | - | chr1.3:5680957-5680976 | None:intergenic | 20.0% |
| !! | TAATAATTTCCCTTTATTGA+TGG | + | chr1.3:5680191-5680210 | MS.gene051633:intron | 20.0% |
| !! | TATATGAGAGAAAAATAAAG+TGG | - | chr1.3:5680500-5680519 | None:intergenic | 20.0% |
| !! | TATTGAAATAATAAGGACTT+GGG | - | chr1.3:5679510-5679529 | None:intergenic | 20.0% |
| !! | TCATGAAATATAAGGAAATA+TGG | - | chr1.3:5679331-5679350 | None:intergenic | 20.0% |
| !! | TCTAAGGAAAAAAACAATAT+GGG | - | chr1.3:5679764-5679783 | None:intergenic | 20.0% |
| !! | TCTTCAATTATTAAGATATC+TGG | - | chr1.3:5678530-5678549 | None:intergenic | 20.0% |
| !! | TGTATTTACTTATGTCAAAA+CGG | - | chr1.3:5678090-5678109 | None:intergenic | 20.0% |
| !! | TTATTGAAATAATAAGGACT+TGG | - | chr1.3:5679511-5679530 | None:intergenic | 20.0% |
| !! | TTCATTTGATAAAACAGTTT+AGG | - | chr1.3:5678446-5678465 | None:intergenic | 20.0% |
| !!! | AACTGTTTTATCAAATGAAA+AGG | + | chr1.3:5678447-5678466 | MS.gene051633:intron | 20.0% |
| !!! | CCATTTTTTGTTATGAATTT+TGG | + | chr1.3:5680954-5680973 | MS.gene051633:intron | 20.0% |
| !!! | GTTGAAATCTAAAATATTGT+TGG | + | chr1.3:5680790-5680809 | MS.gene051633:intron | 20.0% |
| !!! | TTAAGATTTTAGTGTAAACA+TGG | + | chr1.3:5680719-5680738 | MS.gene051633:intron | 20.0% |
| !!! | TTGGATTGATAATTTTTACT+AGG | - | chr1.3:5681536-5681555 | None:intergenic | 20.0% |
| !!! | TTGTTTTGAACTTTTTTGTT+TGG | + | chr1.3:5679607-5679626 | MS.gene051633:intron | 20.0% |
| !!! | TTTGAATTATATTTTGGGTT+TGG | + | chr1.3:5679302-5679321 | MS.gene051633:intron | 20.0% |
| ! | AAAAAGCAACTTTACTCTAA+TGG | + | chr1.3:5681559-5681578 | MS.gene051633:intron | 25.0% |
| ! | AAGTATCTGTTGAAATGATA+AGG | - | chr1.3:5680072-5680091 | None:intergenic | 25.0% |
| ! | AATAGTAAAGGAACAATTGA+TGG | + | chr1.3:5680689-5680708 | MS.gene051633:intron | 25.0% |
| ! | AGTAATAGATAAGCATAATC+AGG | - | chr1.3:5680309-5680328 | None:intergenic | 25.0% |
| ! | ATAACACATTCAGCATTATT+AGG | - | chr1.3:5677896-5677915 | None:intergenic | 25.0% |
| ! | ATAATGCACTAATAATTAGG+TGG | - | chr1.3:5678475-5678494 | None:intergenic | 25.0% |
| ! | ATACAAGTAAAAGAACACAA+AGG | - | chr1.3:5679005-5679024 | None:intergenic | 25.0% |
| ! | ATTATCAAACCAGTGTAAAA+AGG | - | chr1.3:5678684-5678703 | None:intergenic | 25.0% |
| ! | ATTATCTCTTTGTAAGCATT+TGG | - | chr1.3:5681280-5681299 | None:intergenic | 25.0% |
| ! | CAATATAATTATTCGGAGTT+TGG | + | chr1.3:5679464-5679483 | MS.gene051633:intron | 25.0% |
| ! | CTAAGAACTATTGATATTTG+GGG | + | chr1.3:5678738-5678757 | MS.gene051633:intron | 25.0% |
| ! | GAAAGAGAAAAAATCATACA+TGG | + | chr1.3:5678169-5678188 | MS.gene051633:CDS | 25.0% |
| ! | GATTATATTTAAGAGCAACT+GGG | - | chr1.3:5681927-5681946 | None:intergenic | 25.0% |
| ! | GATTATGAAATCAGTTAAGA+AGG | - | chr1.3:5678976-5678995 | None:intergenic | 25.0% |
| ! | GCTAAGAACTATTGATATTT+GGG | + | chr1.3:5678737-5678756 | MS.gene051633:intron | 25.0% |
| ! | GTACACTGTAAAAAAATCTA+AGG | - | chr1.3:5679780-5679799 | None:intergenic | 25.0% |
| ! | TAAAAACAAGAGAAAGAGAA+AGG | + | chr1.3:5677806-5677825 | MS.gene051633:CDS | 25.0% |
| ! | TAACACATTCAGCATTATTA+GGG | - | chr1.3:5677895-5677914 | None:intergenic | 25.0% |
| ! | TAACTGTAATGAAATTCAGA+TGG | - | chr1.3:5680591-5680610 | None:intergenic | 25.0% |
| ! | TAAGAACTATTGATATTTGG+GGG | + | chr1.3:5678739-5678758 | MS.gene051633:intron | 25.0% |
| ! | TAATAATACAGAAGCAATTC+AGG | + | chr1.3:5682035-5682054 | MS.gene051633:intron | 25.0% |
| ! | TAATTAAGTGTTAAACTCAC+AGG | + | chr1.3:5681156-5681175 | MS.gene051633:intron | 25.0% |
| ! | TATCAAACAAAAAATCTTCC+CGG | - | chr1.3:5681810-5681829 | None:intergenic | 25.0% |
| ! | TCAAAGTTTAAACAGAGAAT+TGG | - | chr1.3:5680429-5680448 | None:intergenic | 25.0% |
| ! | TGATTATATTTAAGAGCAAC+TGG | - | chr1.3:5681928-5681947 | None:intergenic | 25.0% |
| ! | TGATTCTCCTACATATATTA+GGG | - | chr1.3:5680755-5680774 | None:intergenic | 25.0% |
| ! | TGCTAAGAACTATTGATATT+TGG | + | chr1.3:5678736-5678755 | MS.gene051633:intron | 25.0% |
| ! | TGTTTAAGCAGTAAAAAGTA+AGG | - | chr1.3:5681338-5681357 | None:intergenic | 25.0% |
| ! | TTGATTCTCCTACATATATT+AGG | - | chr1.3:5680756-5680775 | None:intergenic | 25.0% |
| !! | ATCTAGTAGGAGTATAAATA+AGG | + | chr1.3:5679376-5679395 | MS.gene051633:intron | 25.0% |
| !! | ATGAAAGTATATTGTTGAGT+AGG | + | chr1.3:5680665-5680684 | MS.gene051633:intron | 25.0% |
| !! | CATTATTAGGGTTTGAAATT+GGG | - | chr1.3:5677883-5677902 | None:intergenic | 25.0% |
| !! | CATTGATTAATAATCAACCA+AGG | + | chr1.3:5681946-5681965 | MS.gene051633:intron | 25.0% |
| !! | GATTTATGAAGAGTATAATG+TGG | - | chr1.3:5680997-5681016 | None:intergenic | 25.0% |
| !! | TAAGAATGATCGATATTTTG+TGG | + | chr1.3:5679040-5679059 | MS.gene051633:intron | 25.0% |
| !! | TACAAAGTTGTTTCAAATTG+TGG | - | chr1.3:5678377-5678396 | None:intergenic | 25.0% |
| !! | TCTAGTAGGAGTATAAATAA+GGG | + | chr1.3:5679377-5679396 | MS.gene051633:intron | 25.0% |
| !! | TCTTTGGGTTTAATTATGTT+TGG | + | chr1.3:5681089-5681108 | MS.gene051633:intron | 25.0% |
| !! | TGATTAAATGTAATGGAACA+AGG | - | chr1.3:5678051-5678070 | None:intergenic | 25.0% |
| !! | TGTTGAAATGATAAGGTTTT+AGG | - | chr1.3:5680065-5680084 | None:intergenic | 25.0% |
| !! | TTGTTTTCAGACATTCTAAA+TGG | - | chr1.3:5678412-5678431 | None:intergenic | 25.0% |
| !! | TTTGTGTTCTTTTACTTGTA+TGG | + | chr1.3:5679004-5679023 | MS.gene051633:intron | 25.0% |
| !!! | AATTCTTCTTATTTCTATCG+AGG | + | chr1.3:5678850-5678869 | MS.gene051633:intron | 25.0% |
| !!! | AGACCAATTACTCTAAAATT+TGG | + | chr1.3:5679577-5679596 | MS.gene051633:intron | 25.0% |
| !!! | ATCCCAAATTTTAGAGTAAT+TGG | - | chr1.3:5679583-5679602 | None:intergenic | 25.0% |
| !!! | ATGAACAATTTCCATTTTTC+TGG | - | chr1.3:5681760-5681779 | None:intergenic | 25.0% |
| !!! | ATGAATTATGTGCTTTTTTC+AGG | + | chr1.3:5678120-5678139 | MS.gene051633:intron | 25.0% |
| !!! | CTTTACTCTAATGGATTTTA+AGG | + | chr1.3:5681568-5681587 | MS.gene051633:intron | 25.0% |
| !!! | GACCAATTACTCTAAAATTT+GGG | + | chr1.3:5679578-5679597 | MS.gene051633:intron | 25.0% |
| !!! | GTCCAGTTTTTTTTATGTTA+GGG | - | chr1.3:5681620-5681639 | None:intergenic | 25.0% |
| !!! | TGTCCAGTTTTTTTTATGTT+AGG | - | chr1.3:5681621-5681640 | None:intergenic | 25.0% |
| AAAACAACTGAACTTGTCTT+TGG | + | chr1.3:5681073-5681092 | MS.gene051633:intron | 30.0% | |
| AAAACCCAACAACATTTGTA+AGG | - | chr1.3:5679207-5679226 | None:intergenic | 30.0% | |
| AAAACTGGACAAAATATAGC+TGG | + | chr1.3:5681630-5681649 | MS.gene051633:intron | 30.0% | |
| AAACAACTGAACTTGTCTTT+GGG | + | chr1.3:5681074-5681093 | MS.gene051633:intron | 30.0% | |
| AACACATCAGAAACTGTAAA+TGG | - | chr1.3:5680355-5680374 | None:intergenic | 30.0% | |
| AAGAATGTGAGACCAATTAT+GGG | - | chr1.3:5679649-5679668 | None:intergenic | 30.0% | |
| AATAATAAGGACTTGGGAAA+AGG | - | chr1.3:5679504-5679523 | None:intergenic | 30.0% | |
| AGATGAAAATCAACATTGCA+AGG | - | chr1.3:5678270-5678289 | None:intergenic | 30.0% | |
| AGCAAGTACAAAATTCCTAA+AGG | - | chr1.3:5680845-5680864 | None:intergenic | 30.0% | |
| AGTTTAAACAGAGAATTGGA+AGG | - | chr1.3:5680425-5680444 | None:intergenic | 30.0% | |
| ATACTCTTCATAAATCATGG+TGG | + | chr1.3:5681001-5681020 | MS.gene051633:intron | 30.0% | |
| ATTCTTAATCTGTCATGAAC+AGG | - | chr1.3:5682226-5682245 | None:intergenic | 30.0% | |
| ATTTGTCCAATGAACGTATT+AGG | + | chr1.3:5680905-5680924 | MS.gene051633:intron | 30.0% | |
| CAAAACCTCTCAGTAAAAAT+CGG | + | chr1.3:5677778-5677797 | MS.gene051633:CDS | 30.0% | |
| CACCCTAACATAAAAAAAAC+TGG | + | chr1.3:5681615-5681634 | MS.gene051633:intron | 30.0% | |
| CGATAAGAATGATACGTATT+TGG | + | chr1.3:5678880-5678899 | MS.gene051633:intron | 30.0% | |
| CTAATACCTAATACGTTCAT+TGG | - | chr1.3:5680914-5680933 | None:intergenic | 30.0% | |
| CTGTAAATGGTTGTATTGTA+TGG | - | chr1.3:5680342-5680361 | None:intergenic | 30.0% | |
| GCAAGTACAAAATTCCTAAA+GGG | - | chr1.3:5680844-5680863 | None:intergenic | 30.0% | |
| TAAGAATGATACGTATTTGG+TGG | + | chr1.3:5678883-5678902 | MS.gene051633:intron | 30.0% | |
| TAAGAATGTGAGACCAATTA+TGG | - | chr1.3:5679650-5679669 | None:intergenic | 30.0% | |
| TCATTTCAACAGATACTTTG+CGG | + | chr1.3:5680074-5680093 | MS.gene051633:intron | 30.0% | |
| TGTTGAGTAGGTAATAGTAA+AGG | + | chr1.3:5680677-5680696 | MS.gene051633:intron | 30.0% | |
| TGTTTAAACTTTGATGTTCC+TGG | + | chr1.3:5680435-5680454 | MS.gene051633:intron | 30.0% | |
| TTAGGAGAATAGACATGTAT+TGG | - | chr1.3:5678811-5678830 | None:intergenic | 30.0% | |
| TTGTATTGTATGGTCTTCTA+GGG | - | chr1.3:5680332-5680351 | None:intergenic | 30.0% | |
| TTTCTCTCATATAAACAGAG+CGG | + | chr1.3:5680507-5680526 | MS.gene051633:intron | 30.0% | |
| ! | AATGCAACACACATTTTACT+GGG | - | chr1.3:5680149-5680168 | None:intergenic | 30.0% |
| ! | AGAATCAAACTGAAGGTTTT+TGG | + | chr1.3:5680768-5680787 | MS.gene051633:intron | 30.0% |
| ! | ATCTAAAATATTGTTGGACG+AGG | + | chr1.3:5680796-5680815 | MS.gene051633:intron | 30.0% |
| ! | GCATTATTAGGGTTTGAAAT+TGG | - | chr1.3:5677884-5677903 | None:intergenic | 30.0% |
| ! | GCTACTATCTTTTACGAAAA+AGG | - | chr1.3:5681879-5681898 | None:intergenic | 30.0% |
| ! | GTTTGATAATTCTGAATCCT+CGG | + | chr1.3:5678694-5678713 | MS.gene051633:intron | 30.0% |
| ! | TCTAAAATATTGTTGGACGA+GGG | + | chr1.3:5680797-5680816 | MS.gene051633:intron | 30.0% |
| ! | TGATTTTCATCTTGAATGCA+TGG | + | chr1.3:5678278-5678297 | MS.gene051633:intron | 30.0% |
| ! | TTAAGCATACAACAGTCTTT+TGG | + | chr1.3:5681687-5681706 | MS.gene051633:intron | 30.0% |
| ! | TTCATGACTTTTGAATTAGC+AGG | + | chr1.3:5681775-5681794 | MS.gene051633:intron | 30.0% |
| !! | CTGTTTTCAGCTTATTTTCA+GGG | + | chr1.3:5678015-5678034 | MS.gene051633:intron | 30.0% |
| !! | GATTTTAGTGTAAACATGGT+AGG | + | chr1.3:5680723-5680742 | MS.gene051633:intron | 30.0% |
| !!! | AGTAAAGTTGCTTTTTGAGT+TGG | - | chr1.3:5681555-5681574 | None:intergenic | 30.0% |
| !!! | TCAATTTTGGCTTACTTTGT+TGG | - | chr1.3:5680533-5680552 | None:intergenic | 30.0% |
| !!! | TTGTTGGGTTTTTTCATAGA+TGG | + | chr1.3:5679215-5679234 | MS.gene051633:intron | 30.0% |
| AAAACAGGATGCATACGTAA+TGG | - | chr1.3:5678648-5678667 | None:intergenic | 35.0% | |
| AAAGGGTGGCTTACAATATT+AGG | - | chr1.3:5680827-5680846 | None:intergenic | 35.0% | |
| AAATTTGTGACGTGCCAAAT+CGG | - | chr1.3:5681133-5681152 | None:intergenic | 35.0% | |
| AAGAAACCTGTCAATGTTGA+TGG | - | chr1.3:5677853-5677872 | None:intergenic | 35.0% | |
| AAGAGAAAGAGAAAGGCTTT+AGG | + | chr1.3:5677813-5677832 | MS.gene051633:CDS | 35.0% | |
| AAGTAGGATTGTCAGAAACA+TGG | - | chr1.3:5682147-5682166 | None:intergenic | 35.0% | |
| AATATTGTAAGCCACCCTTT+AGG | + | chr1.3:5680827-5680846 | MS.gene051633:intron | 35.0% | |
| AATGAGATTATGATCCTGTG+TGG | - | chr1.3:5677724-5677743 | None:intergenic | 35.0% | |
| AATTAGCAGGCAAAAAGTTC+CGG | + | chr1.3:5681788-5681807 | MS.gene051633:intron | 35.0% | |
| ACTCATAATCCAAATTCGCA+AGG | - | chr1.3:5679920-5679939 | None:intergenic | 35.0% | |
| AGAAACCTGTCAATGTTGAT+GGG | - | chr1.3:5677852-5677871 | None:intergenic | 35.0% | |
| AGATAAGCATAATCAGGTCA+AGG | - | chr1.3:5680303-5680322 | None:intergenic | 35.0% | |
| AGATCATCATCATAGGAAAC+AGG | - | chr1.3:5682250-5682269 | None:intergenic | 35.0% | |
| AGTACAAAATTCCTAAAGGG+TGG | - | chr1.3:5680841-5680860 | None:intergenic | 35.0% | |
| AGTAGACTAAGTGTGTGTTT+GGG | + | chr1.3:5681401-5681420 | MS.gene051633:intron | 35.0% | |
| AGTTCAGATTCTACCTGATT+TGG | + | chr1.3:5680272-5680291 | MS.gene051633:intron | 35.0% | |
| ATGTAGGAGAATCAAACTGA+AGG | + | chr1.3:5680761-5680780 | MS.gene051633:intron | 35.0% | |
| CAATTCCATATATTAGACCG+AGG | + | chr1.3:5681713-5681732 | MS.gene051633:intron | 35.0% | |
| CCAACCTTACAAATGTTGTT+GGG | + | chr1.3:5679200-5679219 | MS.gene051633:intron | 35.0% | |
| CTCACAGTTGTAGAAAACAT+AGG | - | chr1.3:5681666-5681685 | None:intergenic | 35.0% | |
| CTTAACCATTGAAGTGAAGT+AGG | + | chr1.3:5679666-5679685 | MS.gene051633:intron | 35.0% | |
| GAAATGTTTCCTTGCGAATT+TGG | + | chr1.3:5679908-5679927 | MS.gene051633:intron | 35.0% | |
| GAACAAGACCATAATCGAAA+CGG | + | chr1.3:5677690-5677709 | MS.gene051633:CDS | 35.0% | |
| GAAGTGAAGTGATTTCTGTT+TGG | + | chr1.3:5681476-5681495 | MS.gene051633:intron | 35.0% | |
| GAATGTGAGTCTAATCTAGT+AGG | + | chr1.3:5679363-5679382 | MS.gene051633:intron | 35.0% | |
| GTCTAAATTCGTGTAGGATA+GGG | + | chr1.3:5678300-5678319 | MS.gene051633:intron | 35.0% | |
| GTTGTATTGTATGGTCTTCT+AGG | - | chr1.3:5680333-5680352 | None:intergenic | 35.0% | |
| TACATGGTATATACAGCTGT+AGG | + | chr1.3:5678185-5678204 | MS.gene051633:CDS | 35.0% | |
| TACTCACCTCTTCTTAGAAA+AGG | + | chr1.3:5680245-5680264 | MS.gene051633:intron | 35.0% | |
| TCCAACCTTACAAATGTTGT+TGG | + | chr1.3:5679199-5679218 | MS.gene051633:intron | 35.0% | |
| TGGTTAAAATCTGCAAGGTT+GGG | - | chr1.3:5680388-5680407 | None:intergenic | 35.0% | |
| TTTCATCGTTGTCCCATAAT+TGG | + | chr1.3:5679634-5679653 | MS.gene051633:intron | 35.0% | |
| TTTGACGAAGCAAAATCAAG+AGG | - | chr1.3:5678584-5678603 | None:intergenic | 35.0% | |
| ! | AATATTGGTGTTTATCAGCC+AGG | - | chr1.3:5680456-5680475 | None:intergenic | 35.0% |
| ! | AATTTTATGTTCACCTGCCT+CGG | - | chr1.3:5681733-5681752 | None:intergenic | 35.0% |
| ! | ATGCATCCTGTTTTACTTGT+AGG | + | chr1.3:5678654-5678673 | MS.gene051633:intron | 35.0% |
| ! | CAATGCAACACACATTTTAC+TGG | - | chr1.3:5680150-5680169 | None:intergenic | 35.0% |
| ! | CGATTTTTACTGAGAGGTTT+TGG | - | chr1.3:5677780-5677799 | None:intergenic | 35.0% |
| ! | CTTTGCGGATTTTCTAATCT+TGG | + | chr1.3:5680089-5680108 | MS.gene051633:intron | 35.0% |
| ! | GTGTTCTTTTACTTGTATGG+AGG | + | chr1.3:5679007-5679026 | MS.gene051633:intron | 35.0% |
| ! | TATTTTGTGGTGCAAGTTTG+TGG | + | chr1.3:5679053-5679072 | MS.gene051633:intron | 35.0% |
| ! | TGAATGTCAGAGCATTACTT+GGG | - | chr1.3:5678612-5678631 | None:intergenic | 35.0% |
| ! | TTGAATGTCAGAGCATTACT+TGG | - | chr1.3:5678613-5678632 | None:intergenic | 35.0% |
| !! | CTCTAACCTTTTCTAAGAAG+AGG | - | chr1.3:5680254-5680273 | None:intergenic | 35.0% |
| !! | GCTGTTTTCAGCTTATTTTC+AGG | + | chr1.3:5678014-5678033 | MS.gene051633:intron | 35.0% |
| !! | GTTTCTGGTTAAAATCTGCA+AGG | - | chr1.3:5680393-5680412 | None:intergenic | 35.0% |
| !!! | CTTTTTAAAGCTGTCCGATT+TGG | + | chr1.3:5681116-5681135 | MS.gene051633:intron | 35.0% |
| AACCATCTAAACAGCAGTCT+TGG | - | chr1.3:5681848-5681867 | None:intergenic | 40.0% | |
| AATAAGGACTTGGGAAAAGG+AGG | - | chr1.3:5679501-5679520 | None:intergenic | 40.0% | |
| ACACAATCAAAAGAACACCG+AGG | - | chr1.3:5678714-5678733 | None:intergenic | 40.0% | |
| ATGGATGCCTGCTTAAAACT+TGG | - | chr1.3:5682064-5682083 | None:intergenic | 40.0% | |
| ATTAGCAGGCAAAAAGTTCC+GGG | + | chr1.3:5681789-5681808 | MS.gene051633:intron | 40.0% | |
| CAAGTATTCGGAAGTAAGAC+AGG | - | chr1.3:5678945-5678964 | None:intergenic | 40.0% | |
| CAGTAGACTAAGTGTGTGTT+TGG | + | chr1.3:5681400-5681419 | MS.gene051633:intron | 40.0% | |
| CATTTGTAAGGTTGGAACCA+AGG | - | chr1.3:5679195-5679214 | None:intergenic | 40.0% | |
| CCCAACAACATTTGTAAGGT+TGG | - | chr1.3:5679203-5679222 | None:intergenic | 40.0% | |
| CTGGTTAAAATCTGCAAGGT+TGG | - | chr1.3:5680389-5680408 | None:intergenic | 40.0% | |
| CTTTACGATTGTCCAAACTG+CGG | + | chr1.3:5678326-5678345 | MS.gene051633:intron | 40.0% | |
| GAAAAAAGCAAGAGAGTTCG+AGG | + | chr1.3:5681300-5681319 | MS.gene051633:CDS | 40.0% | |
| GAAGCAAAATCAAGAGGACT+GGG | - | chr1.3:5678578-5678597 | None:intergenic | 40.0% | |
| GAGACAGCCCTAATATATGT+AGG | + | chr1.3:5680745-5680764 | MS.gene051633:intron | 40.0% | |
| GCCACATTCCCATCAATAAA+GGG | - | chr1.3:5680203-5680222 | None:intergenic | 40.0% | |
| GGAGAACCTACAAGTAAAAC+AGG | - | chr1.3:5678663-5678682 | None:intergenic | 40.0% | |
| GGTCTAAATTCGTGTAGGAT+AGG | + | chr1.3:5678299-5678318 | MS.gene051633:intron | 40.0% | |
| GGTTTGTGATAGAGACATGT+CGG | + | chr1.3:5678141-5678160 | MS.gene051633:intron | 40.0% | |
| TCAAGCAGTAAGGACTTTGT+TGG | + | chr1.3:5680867-5680886 | MS.gene051633:intron | 40.0% | |
| TCCAAGCAGATCATCATCAT+AGG | - | chr1.3:5682257-5682276 | None:intergenic | 40.0% | |
| TCCCTTTATTGATGGGAATG+TGG | + | chr1.3:5680199-5680218 | MS.gene051633:intron | 40.0% | |
| TGATGTTGAAGAGGGTGAAT+TGG | + | chr1.3:5677656-5677675 | MS.gene051633:CDS | 40.0% | |
| TGCATGGTCTAAATTCGTGT+AGG | + | chr1.3:5678294-5678313 | MS.gene051633:intron | 40.0% | |
| TGCCACATTCCCATCAATAA+AGG | - | chr1.3:5680204-5680223 | None:intergenic | 40.0% | |
| TGCGCACTAGAAAATGTACA+AGG | - | chr1.3:5682118-5682137 | None:intergenic | 40.0% | |
| TGTTCCATTAAGTGCATCGA+CGG | + | chr1.3:5681375-5681394 | MS.gene051633:intron | 40.0% | |
| ! | AACCAAGACTGCTGTTTAGA+TGG | + | chr1.3:5681843-5681862 | MS.gene051633:intron | 40.0% |
| ! | AAGGAGCACATGCAAGTATT+CGG | - | chr1.3:5678957-5678976 | None:intergenic | 40.0% |
| ! | ACAGGAACACGTTTCTTTTC+AGG | - | chr1.3:5682208-5682227 | None:intergenic | 40.0% |
| ! | AGAATCCTCCTCTTTTTGCA+TGG | - | chr1.3:5682083-5682102 | None:intergenic | 40.0% |
| ! | ATTGGTCTCTGAATAGTAGC+AGG | - | chr1.3:5679565-5679584 | None:intergenic | 40.0% |
| ! | CAACATTGCAAGGAAGTACA+AGG | - | chr1.3:5678260-5678279 | None:intergenic | 40.0% |
| ! | CGATATCGTCAAAGAGGTAT+TGG | + | chr1.3:5678232-5678251 | MS.gene051633:intron | 40.0% |
| ! | GAGATGGTTGATGTTGAAGA+GGG | + | chr1.3:5677648-5677667 | MS.gene051633:CDS | 40.0% |
| ! | GATGCATACGTAATGGAAAC+TGG | - | chr1.3:5678641-5678660 | None:intergenic | 40.0% |
| ! | GTAGGTTCTCCTTTTTACAC+TGG | + | chr1.3:5678672-5678691 | MS.gene051633:intron | 40.0% |
| ! | GTGAAGTAGGTGCTGTATAA+TGG | + | chr1.3:5679679-5679698 | MS.gene051633:intron | 40.0% |
| ! | TACTTGCTGATCAAGCAGTA+AGG | + | chr1.3:5680857-5680876 | MS.gene051633:intron | 40.0% |
| ! | TCCTATGATGATGATCTGCT+TGG | + | chr1.3:5682253-5682272 | MS.gene051633:CDS | 40.0% |
| ! | TGAGATGGTTGATGTTGAAG+AGG | + | chr1.3:5677647-5677666 | MS.gene051633:CDS | 40.0% |
| !! | ACATTTTCTAGTGCGCATCA+GGG | + | chr1.3:5682121-5682140 | MS.gene051633:CDS | 40.0% |
| !! | AGAAAGAGAAAGGCTTTAGG+AGG | + | chr1.3:5677816-5677835 | MS.gene051633:CDS | 40.0% |
| !! | GCATACTAAAGAAGCATTGC+TGG | - | chr1.3:5679709-5679728 | None:intergenic | 40.0% |
| !! | TACATTTTCTAGTGCGCATC+AGG | + | chr1.3:5682120-5682139 | MS.gene051633:CDS | 40.0% |
| !! | TTCTAATCTTGGCTTGTCAC+TGG | + | chr1.3:5680100-5680119 | MS.gene051633:intron | 40.0% |
| ACCTGCCTCGGTCTAATATA+TGG | - | chr1.3:5681721-5681740 | None:intergenic | 45.0% | |
| AGAGGAGGATTCTTCTCAAG+AGG | + | chr1.3:5682090-5682109 | MS.gene051633:CDS | 45.0% | |
| AGTAGCAGGACAAGTCACAA+AGG | - | chr1.3:5679551-5679570 | None:intergenic | 45.0% | |
| ATACAGCTGTAGGTTGCCTT+GGG | + | chr1.3:5678195-5678214 | MS.gene051633:CDS | 45.0% | |
| ATGCACCCATCAACATTGAC+AGG | + | chr1.3:5677844-5677863 | MS.gene051633:CDS | 45.0% | |
| ATGGTAAGCGATTTCGGACA+GGG | + | chr1.3:5681218-5681237 | MS.gene051633:CDS | 45.0% | |
| CAAGATCAAGATAAACCGCC+AGG | + | chr1.3:5682181-5682200 | MS.gene051633:CDS | 45.0% | |
| CAGCACCTACTTCACTTCAA+TGG | - | chr1.3:5679674-5679693 | None:intergenic | 45.0% | |
| CGAAGAAGACGATGTTGAGA+TGG | + | chr1.3:5677632-5677651 | MS.gene051633:CDS | 45.0% | |
| CGAAGCAAAATCAAGAGGAC+TGG | - | chr1.3:5678579-5678598 | None:intergenic | 45.0% | |
| CTGCTGATGGTAAGCGATTT+CGG | + | chr1.3:5681212-5681231 | MS.gene051633:CDS | 45.0% | |
| GAGATTATGATCCTGTGTGG+CGG | - | chr1.3:5677721-5677740 | None:intergenic | 45.0% | |
| GATATTTGGGGGTGAGTTTG+AGG | + | chr1.3:5678750-5678769 | MS.gene051633:intron | 45.0% | |
| GTTGAGCGATATCGTCAAAG+AGG | + | chr1.3:5678226-5678245 | MS.gene051633:CDS | 45.0% | |
| TAAGGTTGGAACCAAGGTTG+AGG | - | chr1.3:5679189-5679208 | None:intergenic | 45.0% | |
| TAGCCACTTCAACCTCTCTT+GGG | + | chr1.3:5679156-5679175 | MS.gene051633:intron | 45.0% | |
| TATACAGCTGTAGGTTGCCT+TGG | + | chr1.3:5678194-5678213 | MS.gene051633:CDS | 45.0% | |
| TCCATATATTAGACCGAGGC+AGG | + | chr1.3:5681717-5681736 | MS.gene051633:intron | 45.0% | |
| TGGGAATGTGGCATTGTTTG+AGG | + | chr1.3:5680211-5680230 | MS.gene051633:intron | 45.0% | |
| TGTGGTGTTTGCCTTGTGTA+TGG | + | chr1.3:5679071-5679090 | MS.gene051633:intron | 45.0% | |
| TTACTGGGAGATGAAGAGAG+AGG | - | chr1.3:5680134-5680153 | None:intergenic | 45.0% | |
| ! | ACTGCTGTTTAGATGGTTCC+GGG | + | chr1.3:5681850-5681869 | MS.gene051633:intron | 45.0% |
| ! | CGCTTCCGATTTTTACTGAG+AGG | - | chr1.3:5677786-5677805 | None:intergenic | 45.0% |
| ! | CTTTTACGAAAAAGGCAGCC+CGG | - | chr1.3:5681871-5681890 | None:intergenic | 45.0% |
| ! | GACTGCTGTTTAGATGGTTC+CGG | + | chr1.3:5681849-5681868 | MS.gene051633:intron | 45.0% |
| ! | GGAAGGAGCAAACTAGTTTC+TGG | - | chr1.3:5680408-5680427 | None:intergenic | 45.0% |
| ! | GTCTTTGCACTCACGTTTTG+TGG | + | chr1.3:5679736-5679755 | MS.gene051633:intron | 45.0% |
| !! | AAGGAACAATTGATGGCGCT+AGG | + | chr1.3:5680696-5680715 | MS.gene051633:intron | 45.0% |
| !! | ACACGTTTCTTTTCAGGACC+TGG | - | chr1.3:5682202-5682221 | None:intergenic | 45.0% |
| !! | GAGAAAGGCTTTAGGAGGAT+CGG | + | chr1.3:5677821-5677840 | MS.gene051633:CDS | 45.0% |
| !!! | GATAAGGTTTTAGGCGCAGA+AGG | - | chr1.3:5680056-5680075 | None:intergenic | 45.0% |
| !! | AATAAAAATATGATATATTT+AGG | - | chr1.3:5680561-5680580 | None:intergenic | 5.0% |
| AGCCACTTCAACCTCTCTTG+GGG | + | chr1.3:5679157-5679176 | MS.gene051633:intron | 50.0% | |
| CGTGAGTGCAAAGACAGATG+AGG | - | chr1.3:5679731-5679750 | None:intergenic | 50.0% | |
| GATGGTAAGCGATTTCGGAC+AGG | + | chr1.3:5681217-5681236 | MS.gene051633:CDS | 50.0% | |
| GCAGAGAACCACCATACACA+AGG | - | chr1.3:5679085-5679104 | None:intergenic | 50.0% | |
| GCAGGACAAGTCACAAAGGA+AGG | - | chr1.3:5679547-5679566 | None:intergenic | 50.0% | |
| GCAGGCATCCATGCAAAAAG+AGG | + | chr1.3:5682072-5682091 | MS.gene051633:CDS | 50.0% | |
| GGACTTGGGAAAAGGAGGAA+AGG | - | chr1.3:5679496-5679515 | None:intergenic | 50.0% | |
| GGCATCCATGCAAAAAGAGG+AGG | + | chr1.3:5682075-5682094 | MS.gene051633:CDS | 50.0% | |
| GGTCAAGGCTGAACCAAATC+AGG | - | chr1.3:5680288-5680307 | None:intergenic | 50.0% | |
| GGTGTTTGCCTTGTGTATGG+TGG | + | chr1.3:5679074-5679093 | MS.gene051633:intron | 50.0% | |
| GTAGACGCAATACAGTCCTG+TGG | + | chr1.3:5681178-5681197 | MS.gene051633:CDS | 50.0% | |
| GTAGCCACTTCAACCTCTCT+TGG | + | chr1.3:5679155-5679174 | MS.gene051633:intron | 50.0% | |
| TGCATTTGCGATGCGCAAGT+AGG | - | chr1.3:5682163-5682182 | None:intergenic | 50.0% | |
| TGGTAAGCGATTTCGGACAG+GGG | + | chr1.3:5681219-5681238 | MS.gene051633:CDS | 50.0% | |
| TGTGCCGTCGATGCACTTAA+TGG | - | chr1.3:5681382-5681401 | None:intergenic | 50.0% | |
| TTGCAATTGCAGCCGCAGTT+TGG | - | chr1.3:5678341-5678360 | None:intergenic | 50.0% | |
| !! | CGTTTCTTTTCAGGACCTGG+CGG | - | chr1.3:5682199-5682218 | None:intergenic | 50.0% |
| !!! | CAGGCAGCCAAGTTTTAAGC+AGG | + | chr1.3:5682054-5682073 | MS.gene051633:CDS | 50.0% |
| !!! | GGTTTTAGGCGCAGAAGGAA+AGG | - | chr1.3:5680051-5680070 | None:intergenic | 50.0% |
| CACCCCAAGAGAGGTTGAAG+TGG | - | chr1.3:5679162-5679181 | None:intergenic | 55.0% | |
| CACTTCAACCTCTCTTGGGG+TGG | + | chr1.3:5679160-5679179 | MS.gene051633:intron | 55.0% | |
| CGCTCAACGCAGAAATCCCA+AGG | - | chr1.3:5678214-5678233 | None:intergenic | 55.0% | |
| CGGCGACACCGTTTCGATTA+TGG | - | chr1.3:5677701-5677720 | None:intergenic | 55.0% | |
| GACGCAATACAGTCCTGTGG+AGG | + | chr1.3:5681181-5681200 | MS.gene051633:CDS | 55.0% | |
| GCTTACCATCAGCAGTCTGC+TGG | - | chr1.3:5681207-5681226 | None:intergenic | 55.0% | |
| GGTAAGCGATTTCGGACAGG+GGG | + | chr1.3:5681220-5681239 | MS.gene051633:CDS | 55.0% | |
| TGAGGAAACCACCCCAAGAG+AGG | - | chr1.3:5679171-5679190 | None:intergenic | 55.0% | |
| TGGGGTGGTTTCCTCAACCT+TGG | + | chr1.3:5679175-5679194 | MS.gene051633:intron | 55.0% | |
| AAGCGATTTCGGACAGGGGG+TGG | + | chr1.3:5681223-5681242 | MS.gene051633:CDS | 60.0% | |
| GGACAGGGGGTGGTGTATTG+TGG | + | chr1.3:5681233-5681252 | MS.gene051633:CDS | 60.0% | |
| GGAGGCCAGCAGACTGCTGA+TGG | + | chr1.3:5681199-5681218 | MS.gene051633:CDS | 65.0% | |
| ! | AGCAGTCTGCTGGCCTCCAC+AGG | - | chr1.3:5681197-5681216 | None:intergenic | 65.0% |
| !! | AAACGGTGTCGCCGCCACAC+AGG | + | chr1.3:5677707-5677726 | MS.gene051633:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 5677594 | 5682309 | 5677594 | ID=MS.gene051633 |
| chr1.3 | mRNA | 5677594 | 5682309 | 5677594 | ID=MS.gene051633.t1;Parent=MS.gene051633 |
| chr1.3 | exon | 5677594 | 5677865 | 5677594 | ID=MS.gene051633.t1.exon1;Parent=MS.gene051633.t1 |
| chr1.3 | CDS | 5677594 | 5677865 | 5677594 | ID=cds.MS.gene051633.t1;Parent=MS.gene051633.t1 |
| chr1.3 | exon | 5678142 | 5678247 | 5678142 | ID=MS.gene051633.t1.exon2;Parent=MS.gene051633.t1 |
| chr1.3 | CDS | 5678142 | 5678247 | 5678142 | ID=cds.MS.gene051633.t1;Parent=MS.gene051633.t1 |
| chr1.3 | exon | 5681178 | 5681321 | 5681178 | ID=MS.gene051633.t1.exon3;Parent=MS.gene051633.t1 |
| chr1.3 | CDS | 5681178 | 5681321 | 5681178 | ID=cds.MS.gene051633.t1;Parent=MS.gene051633.t1 |
| chr1.3 | exon | 5682046 | 5682309 | 5682046 | ID=MS.gene051633.t1.exon4;Parent=MS.gene051633.t1 |
| chr1.3 | CDS | 5682046 | 5682309 | 5682046 | ID=cds.MS.gene051633.t1;Parent=MS.gene051633.t1 |
| Gene Sequence |
| Protein sequence |
