Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24159.t1 | XP_003589478.1 | 96.8 | 475 | 15 | 0 | 113 | 587 | 18 | 492 | 4.80E-264 | 920.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24159.t1 | Q6Q8A5 | 69.9 | 468 | 139 | 2 | 124 | 590 | 32 | 498 | 3.9e-182 | 639.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24159.t1 | G7I766 | 96.8 | 475 | 15 | 0 | 113 | 587 | 18 | 492 | 3.4e-264 | 920.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene21680 | MS.gene24159 | PPI |
| MS.gene24159 | MS.gene21950 | PPI |
| MS.gene24159 | MS.gene049065 | PPI |
| MS.gene05986 | MS.gene24159 | PPI |
| MS.gene24159 | MS.gene015822 | PPI |
| MS.gene22288 | MS.gene24159 | PPI |
| MS.gene024702 | MS.gene24159 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24159.t1 | MTR_1g025140 | 96.842 | 475 | 15 | 0 | 113 | 587 | 18 | 492 | 0.0 | 948 |
| MS.gene24159.t1 | MTR_1g025140 | 96.757 | 370 | 12 | 0 | 113 | 482 | 18 | 387 | 0.0 | 741 |
| MS.gene24159.t1 | MTR_8g102460 | 55.508 | 472 | 203 | 3 | 118 | 587 | 26 | 492 | 0.0 | 522 |
| MS.gene24159.t1 | MTR_8g014530 | 56.954 | 453 | 192 | 3 | 137 | 587 | 40 | 491 | 1.55e-179 | 516 |
| MS.gene24159.t1 | MTR_6g088795 | 54.967 | 453 | 202 | 2 | 137 | 587 | 38 | 490 | 3.48e-170 | 493 |
| MS.gene24159.t1 | MTR_5g009000 | 49.783 | 460 | 217 | 5 | 137 | 585 | 40 | 496 | 1.43e-142 | 422 |
| MS.gene24159.t1 | MTR_8g102460 | 57.423 | 357 | 150 | 2 | 233 | 587 | 1 | 357 | 1.67e-141 | 414 |
| MS.gene24159.t1 | MTR_8g102460 | 58.209 | 335 | 134 | 2 | 118 | 451 | 26 | 355 | 1.82e-132 | 392 |
| MS.gene24159.t1 | MTR_4g097900 | 40.741 | 270 | 114 | 5 | 319 | 583 | 1 | 229 | 5.19e-54 | 184 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene24159.t1 | AT1G47840 | 62.446 | 466 | 171 | 3 | 123 | 587 | 31 | 493 | 0.0 | 580 |
| MS.gene24159.t1 | AT4G29130 | 56.798 | 456 | 195 | 2 | 137 | 590 | 40 | 495 | 0.0 | 521 |
| MS.gene24159.t1 | AT2G19860 | 54.352 | 471 | 209 | 3 | 119 | 587 | 26 | 492 | 3.32e-172 | 498 |
| MS.gene24159.t1 | AT1G47840 | 63.939 | 330 | 115 | 3 | 123 | 451 | 31 | 357 | 3.78e-141 | 414 |
| MS.gene24159.t1 | AT1G50460 | 47.817 | 458 | 226 | 4 | 137 | 583 | 40 | 495 | 8.88e-141 | 418 |
| MS.gene24159.t1 | AT2G19860 | 55.091 | 383 | 170 | 2 | 207 | 587 | 1 | 383 | 4.64e-140 | 412 |
| MS.gene24159.t1 | AT3G20040 | 45.243 | 473 | 248 | 4 | 119 | 584 | 25 | 493 | 1.41e-133 | 399 |
| MS.gene24159.t1 | AT1G50460 | 48.148 | 405 | 197 | 4 | 190 | 583 | 17 | 419 | 5.96e-123 | 369 |
| MS.gene24159.t1 | AT4G37840 | 42.637 | 455 | 241 | 8 | 136 | 582 | 40 | 482 | 4.44e-102 | 318 |
| MS.gene24159.t1 | AT1G50460 | 50.949 | 316 | 152 | 3 | 137 | 451 | 40 | 353 | 3.03e-101 | 311 |
| MS.gene24159.t1 | AT1G47845 | 60.741 | 135 | 52 | 1 | 376 | 509 | 40 | 174 | 1.23e-48 | 167 |
Find 151 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCAACGAAATTAGTGTATT+TGG | 0.082600 | 1.2:+897850 | MS.gene24159:intron |
| AGAAACATGCCCTTGTAATT+TGG | 0.149102 | 1.2:-907380 | None:intergenic |
| TCTCTATCAAATACAGTTAA+AGG | 0.151018 | 1.2:-907558 | None:intergenic |
| GCTGAAGAGGAAGGTTTATT+TGG | 0.151162 | 1.2:+907800 | MS.gene24159:CDS |
| CTGTTTGATTTCATTGCTTT+GGG | 0.156073 | 1.2:+906799 | MS.gene24159:CDS |
| ATCTTCTTTGTCCACAAATT+TGG | 0.156563 | 1.2:-906827 | None:intergenic |
| TGTTTCTTCTTCTGATAAAA+TGG | 0.207744 | 1.2:+907396 | MS.gene24159:CDS |
| CCAATTTCTCTCTTTCTTCC+TGG | 0.240507 | 1.2:-906868 | None:intergenic |
| TTCAAGAGGAACATAGTATT+TGG | 0.241775 | 1.2:+897931 | MS.gene24159:CDS |
| GACTCAAAAGGTGTTATCTT+TGG | 0.251344 | 1.2:+908550 | MS.gene24159:CDS |
| GCTGTTTGATTTCATTGCTT+TGG | 0.257650 | 1.2:+906798 | MS.gene24159:CDS |
| GAAACATGCCCTTGTAATTT+GGG | 0.288810 | 1.2:-907379 | None:intergenic |
| CCAGGAAGAAAGAGAGAAAT+TGG | 0.301013 | 1.2:+906868 | MS.gene24159:CDS |
| TGCTGCATGGCGCTTAGATC+CGG | 0.320311 | 1.2:-908206 | None:intergenic |
| TCAAAAGATGGTTCTGGTAT+TGG | 0.321089 | 1.2:+908700 | MS.gene24159:CDS |
| GCTGGGCTTTCCTCTGATGA+TGG | 0.324548 | 1.2:+900001 | MS.gene24159:CDS |
| CTTTCCTCTGATGATGGGCC+CGG | 0.337377 | 1.2:+900007 | MS.gene24159:CDS |
| CTGAAGAGGAAGGTTTATTT+GGG | 0.339959 | 1.2:+907801 | MS.gene24159:CDS |
| TCAACGAAATTAGTGTATTT+GGG | 0.354296 | 1.2:+897851 | MS.gene24159:intron |
| GTATTCGACCTTGTGTTTCT+CGG | 0.367660 | 1.2:+897904 | MS.gene24159:CDS |
| GATTCAGTAAAGGAGCTATT+AGG | 0.376273 | 1.2:+908643 | MS.gene24159:CDS |
| TCAATAGAAGTTTGTTTGAC+AGG | 0.385569 | 1.2:-906907 | None:intergenic |
| GCTGCATGGCGCTTAGATCC+GGG | 0.391118 | 1.2:-908205 | None:intergenic |
| TTAGACCTTACTGTTGTCAT+TGG | 0.395174 | 1.2:-897392 | None:intergenic |
| TGGTATTGGAGGTGCTCTAT+TGG | 0.395444 | 1.2:+908714 | MS.gene24159:CDS |
| AACATAGTATTTGGCTAAAC+GGG | 0.399817 | 1.2:+897940 | MS.gene24159:CDS |
| GAGTGGGGTGCTTTCTCAAA+TGG | 0.402916 | 1.2:+907531 | MS.gene24159:CDS |
| TGTCTTCTCAAATGCGGGCT+GGG | 0.405946 | 1.2:+899984 | MS.gene24159:CDS |
| CTCTATCAAATACAGTTAAA+GGG | 0.412605 | 1.2:-907557 | None:intergenic |
| GAACATTCAAAAGATGGTTC+TGG | 0.414412 | 1.2:+908694 | MS.gene24159:CDS |
| ATGTCTTCTCAAATGCGGGC+TGG | 0.415217 | 1.2:+899983 | MS.gene24159:CDS |
| AAATTACTGTTCACAGATGA+TGG | 0.416554 | 1.2:+897150 | MS.gene24159:CDS |
| AACTGTATTTGATAGAGAAA+TGG | 0.419441 | 1.2:+907563 | MS.gene24159:CDS |
| GAACATAGTATTTGGCTAAA+CGG | 0.419670 | 1.2:+897939 | MS.gene24159:CDS |
| TTGTCCATGCCTTTCGTACT+CGG | 0.427134 | 1.2:+907842 | MS.gene24159:CDS |
| CAATTAACTAGGACCTTTCA+AGG | 0.429831 | 1.2:+897322 | MS.gene24159:intron |
| AGAAGTGTTGTTGCCATTGA+TGG | 0.429881 | 1.2:+908577 | MS.gene24159:CDS |
| GTGATAGAACATTCAAAAGA+TGG | 0.439467 | 1.2:+908688 | MS.gene24159:CDS |
| ATAAAGGACATTCAAGGTCT+TGG | 0.442671 | 1.2:+897365 | MS.gene24159:CDS |
| CGCGGAGGGAGGAAGCATAA+AGG | 0.448135 | 1.2:+897349 | MS.gene24159:CDS |
| CGTGTGTTGAGGGTACAATT+AGG | 0.452657 | 1.2:+906394 | MS.gene24159:CDS |
| TTTCCTCTGATGATGGGCCC+GGG | 0.453044 | 1.2:+900008 | MS.gene24159:CDS |
| ATGAAAATTATCCTCAATAC+AGG | 0.454747 | 1.2:+908608 | MS.gene24159:CDS |
| GCCATGCAGCAAGATAATTC+TGG | 0.458132 | 1.2:+908218 | MS.gene24159:CDS |
| GGCGGTAGCTTAGCCGGTGC+AGG | 0.461257 | 1.2:+908496 | MS.gene24159:CDS |
| TTAGCCGGTGCAGGAATTGT+AGG | 0.462749 | 1.2:+908505 | MS.gene24159:CDS |
| TGCTTGTTTGAACGAGGCAT+TGG | 0.466967 | 1.2:+907098 | MS.gene24159:CDS |
| TGCTCAATTAGAAACTCAAC+AGG | 0.471670 | 1.2:+895914 | MS.gene24159:CDS |
| ACAATCTCAGGAATGTATCT+AGG | 0.472627 | 1.2:+907746 | MS.gene24159:CDS |
| CTGGGCTTTCCTCTGATGAT+GGG | 0.475375 | 1.2:+900002 | MS.gene24159:CDS |
| GAGACGAGTGCTAGTCAATA+TGG | 0.475755 | 1.2:+907778 | MS.gene24159:CDS |
| GGAAGAGTGTGGACATAAGT+TGG | 0.478490 | 1.2:-900043 | None:intergenic |
| CTGGCGATTTACAAGCAGTT+GGG | 0.483122 | 1.2:+908237 | MS.gene24159:CDS |
| AGTTGGTATCATGGGAAGCC+CGG | 0.484003 | 1.2:-900026 | None:intergenic |
| TGCAATGTCTTCTCAAATGC+GGG | 0.486500 | 1.2:+899979 | MS.gene24159:CDS |
| TGGTCCAACTGACACCTTGT+TGG | 0.486963 | 1.2:-899888 | None:intergenic |
| GATAGATTTCATTTCCCTCC+AGG | 0.488417 | 1.2:+906850 | MS.gene24159:CDS |
| ACAACATATAGGAATGAGAA+AGG | 0.491582 | 1.2:+906334 | MS.gene24159:intron |
| TATGTCCACACTCTTCCCTC+CGG | 0.506905 | 1.2:+900049 | MS.gene24159:CDS |
| TGTCCATGCCTTTCGTACTC+GGG | 0.507486 | 1.2:+907843 | MS.gene24159:CDS |
| TTTGGGGCTAGCCAAATTTG+TGG | 0.509779 | 1.2:+906816 | MS.gene24159:CDS |
| TCCCTCCTCTATGATAAAGC+AGG | 0.511452 | 1.2:+908260 | MS.gene24159:CDS |
| AACAAACTTCCGTGTGTTGA+GGG | 0.512683 | 1.2:+906384 | MS.gene24159:CDS |
| GCGAAAACTTACATGGTGAC+CGG | 0.513028 | 1.2:-907604 | None:intergenic |
| TGGCTGTTGTTGATCGCCGA+TGG | 0.521307 | 1.2:-899859 | None:intergenic |
| TGACACCTTGTTGGATCGGA+TGG | 0.523063 | 1.2:-899879 | None:intergenic |
| GAAGTGTTGTTGCCATTGAT+GGG | 0.523264 | 1.2:+908578 | MS.gene24159:CDS |
| TTTCTCTCTTTCTTCCTGGA+GGG | 0.524090 | 1.2:-906864 | None:intergenic |
| ACATGGTGAAGAAGAGGTAG+AGG | 0.525079 | 1.2:-899950 | None:intergenic |
| TGGACATAAGTTGGTATCAT+GGG | 0.526568 | 1.2:-900034 | None:intergenic |
| TCTGGCGATTTACAAGCAGT+TGG | 0.527066 | 1.2:+908236 | MS.gene24159:CDS |
| TGCAAGTAAGTCCTGTATTG+AGG | 0.528492 | 1.2:-908619 | None:intergenic |
| TTACCCCTGCTTTATCATAG+AGG | 0.528899 | 1.2:-908265 | None:intergenic |
| GGCTGTTGTTGATCGCCGAT+GGG | 0.529663 | 1.2:-899858 | None:intergenic |
| GTGGACATAAGTTGGTATCA+TGG | 0.531624 | 1.2:-900035 | None:intergenic |
| AGTTTCGTTAATAATCTCGT+TGG | 0.534498 | 1.2:-899908 | None:intergenic |
| AAACGAGGCGGTAGCTTAGC+CGG | 0.535055 | 1.2:+908490 | MS.gene24159:CDS |
| TAGCCGGTGCAGGAATTGTA+GGG | 0.535759 | 1.2:+908506 | MS.gene24159:CDS |
| CGAAAACTTACATGGTGACC+GGG | 0.538853 | 1.2:-907603 | None:intergenic |
| ATGCCCTTGTAATTTGGGAA+TGG | 0.547432 | 1.2:-907374 | None:intergenic |
| TCAGATCATTAGTACTGAGT+GGG | 0.549065 | 1.2:+907515 | MS.gene24159:intron |
| AAAGATGGTTCTGGTATTGG+AGG | 0.549177 | 1.2:+908703 | MS.gene24159:CDS |
| AAACAAACTTCTATTGACTC+TGG | 0.551611 | 1.2:+906913 | MS.gene24159:CDS |
| AGTGCCATTCCCAAATTACA+AGG | 0.554150 | 1.2:+907370 | MS.gene24159:CDS |
| GAACAAACTTCCGTGTGTTG+AGG | 0.554788 | 1.2:+906383 | MS.gene24159:CDS |
| TGTTTGATTTCATTGCTTTG+GGG | 0.556589 | 1.2:+906800 | MS.gene24159:CDS |
| GTTGGTATCATGGGAAGCCC+GGG | 0.557493 | 1.2:-900025 | None:intergenic |
| AAAATTTACCCGAGTACGAA+AGG | 0.558878 | 1.2:-907851 | None:intergenic |
| ATGTCCACACTCTTCCCTCC+GGG | 0.561316 | 1.2:+900050 | MS.gene24159:CDS |
| TCCAGAAACAGCAAAACCCT+TGG | 0.562132 | 1.2:-906953 | None:intergenic |
| GCCAGAATTATCTTGCTGCA+TGG | 0.563415 | 1.2:-908219 | None:intergenic |
| GCTAGTCAATATGGCTGAAG+AGG | 0.563886 | 1.2:+907787 | MS.gene24159:CDS |
| CATGAGGAAGCAAAAGAGAT+GGG | 0.565553 | 1.2:+897183 | MS.gene24159:CDS |
| ACATGAGGAAGCAAAAGAGA+TGG | 0.565607 | 1.2:+897182 | MS.gene24159:CDS |
| TTACTTGCAAGATTCAGTAA+AGG | 0.568226 | 1.2:+908633 | MS.gene24159:CDS |
| CGATCCAACAAGGTGTCAGT+TGG | 0.569735 | 1.2:+899884 | MS.gene24159:CDS |
| GGAAGCATAAAGGACATTCA+AGG | 0.570272 | 1.2:+897359 | MS.gene24159:CDS |
| AATCCCTACAATTCCTGCAC+CGG | 0.571549 | 1.2:-908509 | None:intergenic |
| GATACTGTCGGAACACTAGC+CGG | 0.573684 | 1.2:+907268 | MS.gene24159:CDS |
| GTCAATATGGCTGAAGAGGA+AGG | 0.574803 | 1.2:+907791 | MS.gene24159:CDS |
| CAACTGACACCTTGTTGGAT+CGG | 0.576253 | 1.2:-899883 | None:intergenic |
| ATTTCTCTCTTTCTTCCTGG+AGG | 0.576352 | 1.2:-906865 | None:intergenic |
| CCCCTGCTTTATCATAGAGG+AGG | 0.578706 | 1.2:-908262 | None:intergenic |
| CTGCATGGCGCTTAGATCCG+GGG | 0.580837 | 1.2:-908204 | None:intergenic |
| CCCTGCTTTATCATAGAGGA+GGG | 0.582109 | 1.2:-908261 | None:intergenic |
| AAAATGGAAGAAGACTCAAA+AGG | 0.582348 | 1.2:+908538 | MS.gene24159:CDS |
| AATTACTGTTCACAGATGAT+GGG | 0.586941 | 1.2:+897151 | MS.gene24159:CDS |
| TGTTTCTCGGAATCTTCAAG+AGG | 0.587461 | 1.2:+897917 | MS.gene24159:CDS |
| ATTGTCGTAGTATTCTGCTC+CGG | 0.591120 | 1.2:-907287 | None:intergenic |
| ATACTACGACAATGATGCTA+AGG | 0.592137 | 1.2:+907297 | MS.gene24159:CDS |
| CCCTCCTCTATGATAAAGCA+GGG | 0.592227 | 1.2:+908261 | MS.gene24159:CDS |
| AAGCCCGGGCCCATCATCAG+AGG | 0.592335 | 1.2:-900011 | None:intergenic |
| CAACATATAGGAATGAGAAA+GGG | 0.593571 | 1.2:+906335 | MS.gene24159:intron |
| AGTGTTGTTGCCATTGATGG+GGG | 0.606184 | 1.2:+908580 | MS.gene24159:CDS |
| TCAGCCACATGGTGAAGAAG+AGG | 0.606289 | 1.2:-899956 | None:intergenic |
| ATGCAATGTCTTCTCAAATG+CGG | 0.607135 | 1.2:+899978 | MS.gene24159:CDS |
| GATGCTGCTAGTATCAATCC+CGG | 0.613145 | 1.2:+907585 | MS.gene24159:CDS |
| ATACTAATCAAGTGGACCAA+GGG | 0.614805 | 1.2:+906937 | MS.gene24159:CDS |
| ACTCTGGCATACTAATCAAG+TGG | 0.616192 | 1.2:+906929 | MS.gene24159:CDS |
| TTCAAGGAAAACGCGGAGGG+AGG | 0.620954 | 1.2:+897338 | MS.gene24159:CDS |
| AAGTGTTGTTGCCATTGATG+GGG | 0.622533 | 1.2:+908579 | MS.gene24159:CDS |
| GAAACACAAGGTCGAATACG+AGG | 0.625603 | 1.2:-897900 | None:intergenic |
| CCTTTCTTCCAAGATCCCAT+CGG | 0.625826 | 1.2:+899843 | MS.gene24159:intron |
| CTAATTGTACCCTCAACACA+CGG | 0.626345 | 1.2:-906393 | None:intergenic |
| TAATAGGTTAATGATACTGT+CGG | 0.627342 | 1.2:+907256 | MS.gene24159:intron |
| TGATGGGAAAATCAAACATG+AGG | 0.628305 | 1.2:+897167 | MS.gene24159:CDS |
| TGGGATCTCTATTTACGACA+AGG | 0.631018 | 1.2:+897870 | MS.gene24159:CDS |
| CATACTAATCAAGTGGACCA+AGG | 0.632792 | 1.2:+906936 | MS.gene24159:CDS |
| TCTCATGTTTGCTACGTCCG+AGG | 0.634285 | 1.2:+906474 | MS.gene24159:CDS |
| TTCAGATCATTAGTACTGAG+TGG | 0.635066 | 1.2:+907514 | MS.gene24159:intron |
| AAGACATTGCATCAGCCACA+TGG | 0.640559 | 1.2:-899967 | None:intergenic |
| CCTTTCAAGGAAAACGCGGA+GGG | 0.640784 | 1.2:+897335 | MS.gene24159:CDS |
| AACAGCCATCCGATCCAACA+AGG | 0.642334 | 1.2:+899874 | MS.gene24159:CDS |
| TGTAGTTGCTTGTTTGAACG+AGG | 0.642397 | 1.2:+907092 | MS.gene24159:CDS |
| TGAAGATTCCGAGAAACACA+AGG | 0.650445 | 1.2:-897912 | None:intergenic |
| ACCTTTCAAGGAAAACGCGG+AGG | 0.653804 | 1.2:+897334 | MS.gene24159:CDS |
| GTAGCAAACATGAGATCATG+AGG | 0.657026 | 1.2:-906466 | None:intergenic |
| GTGTTGAGGGTACAATTAGG+TGG | 0.658218 | 1.2:+906397 | MS.gene24159:CDS |
| GAAATATAGACACACCCGGA+GGG | 0.661129 | 1.2:-900064 | None:intergenic |
| AACGAGGCATTGGAAAGACA+AGG | 0.661190 | 1.2:+907108 | MS.gene24159:CDS |
| TCTACCTCTTCTTCACCATG+TGG | 0.668469 | 1.2:+899952 | MS.gene24159:CDS |
| TTACCCGAGTACGAAAGGCA+TGG | 0.671025 | 1.2:-907846 | None:intergenic |
| GTGCCATTCCCAAATTACAA+GGG | 0.674611 | 1.2:+907371 | MS.gene24159:CDS |
| GTGAAGAAGAGGTAGAGGAG+TGG | 0.676113 | 1.2:-899945 | None:intergenic |
| CAGATCATTAGTACTGAGTG+GGG | 0.682773 | 1.2:+907516 | MS.gene24159:intron |
| GATGCACGGTTACTAAACAA+CGG | 0.691729 | 1.2:+897216 | MS.gene24159:CDS |
| CACACCCGGAGGGAAGAGTG+TGG | 0.700125 | 1.2:-900054 | None:intergenic |
| TGTGACACAATTGTAAAACG+AGG | 0.711571 | 1.2:+908475 | MS.gene24159:CDS |
| CCTCCTCTATGATAAAGCAG+GGG | 0.712381 | 1.2:+908262 | MS.gene24159:CDS |
| GACACAATTGTAAAACGAGG+CGG | 0.723974 | 1.2:+908478 | MS.gene24159:CDS |
| AGGACCTTTCAAGGAAAACG+CGG | 0.729096 | 1.2:+897331 | MS.gene24159:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 895891 | 908768 | 895891 | ID=MS.gene24159 |
| chr1.2 | mRNA | 895891 | 908768 | 895891 | ID=MS.gene24159.t1;Parent=MS.gene24159 |
| chr1.2 | exon | 895891 | 895969 | 895891 | ID=MS.gene24159.t1.exon1;Parent=MS.gene24159.t1 |
| chr1.2 | CDS | 895891 | 895969 | 895891 | ID=cds.MS.gene24159.t1;Parent=MS.gene24159.t1 |
| chr1.2 | exon | 897148 | 897246 | 897148 | ID=MS.gene24159.t1.exon2;Parent=MS.gene24159.t1 |
| chr1.2 | CDS | 897148 | 897246 | 897148 | ID=cds.MS.gene24159.t1;Parent=MS.gene24159.t1 |
| chr1.2 | exon | 897333 | 897403 | 897333 | ID=MS.gene24159.t1.exon3;Parent=MS.gene24159.t1 |
| chr1.2 | CDS | 897333 | 897403 | 897333 | ID=cds.MS.gene24159.t1;Parent=MS.gene24159.t1 |
| chr1.2 | exon | 897864 | 897961 | 897864 | ID=MS.gene24159.t1.exon4;Parent=MS.gene24159.t1 |
| chr1.2 | CDS | 897864 | 897961 | 897864 | ID=cds.MS.gene24159.t1;Parent=MS.gene24159.t1 |
| chr1.2 | exon | 899856 | 900071 | 899856 | ID=MS.gene24159.t1.exon5;Parent=MS.gene24159.t1 |
| chr1.2 | CDS | 899856 | 900071 | 899856 | ID=cds.MS.gene24159.t1;Parent=MS.gene24159.t1 |
| chr1.2 | exon | 906345 | 906495 | 906345 | ID=MS.gene24159.t1.exon6;Parent=MS.gene24159.t1 |
| chr1.2 | CDS | 906345 | 906495 | 906345 | ID=cds.MS.gene24159.t1;Parent=MS.gene24159.t1 |
| chr1.2 | exon | 906796 | 906978 | 906796 | ID=MS.gene24159.t1.exon7;Parent=MS.gene24159.t1 |
| chr1.2 | CDS | 906796 | 906978 | 906796 | ID=cds.MS.gene24159.t1;Parent=MS.gene24159.t1 |
| chr1.2 | exon | 907081 | 907155 | 907081 | ID=MS.gene24159.t1.exon8;Parent=MS.gene24159.t1 |
| chr1.2 | CDS | 907081 | 907155 | 907081 | ID=cds.MS.gene24159.t1;Parent=MS.gene24159.t1 |
| chr1.2 | exon | 907262 | 907417 | 907262 | ID=MS.gene24159.t1.exon9;Parent=MS.gene24159.t1 |
| chr1.2 | CDS | 907262 | 907417 | 907262 | ID=cds.MS.gene24159.t1;Parent=MS.gene24159.t1 |
| chr1.2 | exon | 907519 | 907614 | 907519 | ID=MS.gene24159.t1.exon10;Parent=MS.gene24159.t1 |
| chr1.2 | CDS | 907519 | 907614 | 907519 | ID=cds.MS.gene24159.t1;Parent=MS.gene24159.t1 |
| chr1.2 | exon | 907734 | 907864 | 907734 | ID=MS.gene24159.t1.exon11;Parent=MS.gene24159.t1 |
| chr1.2 | CDS | 907734 | 907864 | 907734 | ID=cds.MS.gene24159.t1;Parent=MS.gene24159.t1 |
| chr1.2 | exon | 908202 | 908283 | 908202 | ID=MS.gene24159.t1.exon12;Parent=MS.gene24159.t1 |
| chr1.2 | CDS | 908202 | 908283 | 908202 | ID=cds.MS.gene24159.t1;Parent=MS.gene24159.t1 |
| chr1.2 | exon | 908433 | 908768 | 908433 | ID=MS.gene24159.t1.exon13;Parent=MS.gene24159.t1 |
| chr1.2 | CDS | 908433 | 908768 | 908433 | ID=cds.MS.gene24159.t1;Parent=MS.gene24159.t1 |
| Gene Sequence |
| Protein sequence |