Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015822.t1 | XP_003630707.2 | 99.4 | 498 | 3 | 0 | 1 | 498 | 1 | 498 | 2.00E-271 | 944.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015822.t1 | Q9SEK3 | 77.5 | 498 | 112 | 0 | 1 | 498 | 1 | 498 | 1.7e-218 | 760.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015822.t1 | G7L7F0 | 99.4 | 498 | 3 | 0 | 1 | 498 | 1 | 498 | 1.4e-271 | 944.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene64012 | MS.gene015822 | PPI |
| MS.gene22288 | MS.gene015822 | PPI |
| MS.gene024702 | MS.gene015822 | PPI |
| MS.gene21680 | MS.gene015822 | PPI |
| MS.gene21950 | MS.gene015822 | PPI |
| MS.gene64215 | MS.gene015822 | PPI |
| MS.gene24159 | MS.gene015822 | PPI |
| MS.gene049065 | MS.gene015822 | PPI |
| MS.gene05986 | MS.gene015822 | PPI |
| MS.gene27072 | MS.gene015822 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015822.t1 | MTR_8g102460 | 99.398 | 498 | 3 | 0 | 1 | 498 | 1 | 498 | 0.0 | 1010 |
| MS.gene015822.t1 | MTR_6g088795 | 78.541 | 466 | 100 | 0 | 33 | 498 | 31 | 496 | 0.0 | 766 |
| MS.gene015822.t1 | MTR_8g014530 | 73.022 | 493 | 132 | 1 | 1 | 493 | 1 | 492 | 0.0 | 741 |
| MS.gene015822.t1 | MTR_8g102460 | 99.449 | 363 | 2 | 0 | 136 | 498 | 1 | 363 | 0.0 | 737 |
| MS.gene015822.t1 | MTR_8g102460 | 99.719 | 356 | 1 | 0 | 1 | 356 | 1 | 356 | 0.0 | 733 |
| MS.gene015822.t1 | MTR_1g025140 | 57.616 | 453 | 190 | 2 | 40 | 492 | 42 | 492 | 0.0 | 521 |
| MS.gene015822.t1 | MTR_5g009000 | 57.660 | 470 | 187 | 5 | 30 | 490 | 30 | 496 | 0.0 | 521 |
| MS.gene015822.t1 | MTR_1g025140 | 60.704 | 341 | 133 | 1 | 40 | 380 | 42 | 381 | 6.08e-144 | 418 |
| MS.gene015822.t1 | MTR_4g097900 | 46.324 | 272 | 108 | 3 | 222 | 493 | 1 | 234 | 1.76e-75 | 238 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene015822.t1 | AT4G29130 | 77.079 | 493 | 113 | 0 | 1 | 493 | 1 | 493 | 0.0 | 763 |
| MS.gene015822.t1 | AT2G19860 | 75.453 | 497 | 122 | 0 | 1 | 497 | 1 | 497 | 0.0 | 760 |
| MS.gene015822.t1 | AT2G19860 | 75.258 | 388 | 96 | 0 | 110 | 497 | 1 | 388 | 0.0 | 613 |
| MS.gene015822.t1 | AT1G50460 | 53.911 | 473 | 205 | 4 | 26 | 488 | 26 | 495 | 1.40e-176 | 506 |
| MS.gene015822.t1 | AT3G20040 | 52.429 | 494 | 227 | 3 | 1 | 488 | 1 | 492 | 7.00e-168 | 484 |
| MS.gene015822.t1 | AT1G47840 | 52.954 | 457 | 211 | 4 | 37 | 492 | 40 | 493 | 2.25e-165 | 477 |
| MS.gene015822.t1 | AT1G50460 | 51.970 | 406 | 182 | 4 | 93 | 488 | 17 | 419 | 2.04e-141 | 413 |
| MS.gene015822.t1 | AT1G50460 | 56.495 | 331 | 142 | 2 | 26 | 356 | 26 | 354 | 4.80e-130 | 382 |
| MS.gene015822.t1 | AT4G37840 | 46.187 | 459 | 235 | 5 | 32 | 487 | 33 | 482 | 7.54e-127 | 379 |
| MS.gene015822.t1 | AT1G47840 | 56.075 | 321 | 138 | 3 | 37 | 356 | 40 | 358 | 1.03e-118 | 354 |
| MS.gene015822.t1 | AT1G47845 | 45.882 | 170 | 79 | 4 | 255 | 423 | 26 | 183 | 1.82e-39 | 141 |
Find 128 sgRNAs with CRISPR-Local
Find 257 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTGCTGCTGCTGGTATTT+TGG | 0.070351 | 4.2:-2626822 | MS.gene015822:CDS |
| AGCTTCTCACTCTCAGTATT+TGG | 0.121428 | 4.2:-2626588 | MS.gene015822:CDS |
| CTTACCATATCTCCTGATTT+TGG | 0.171892 | 4.2:+2628061 | None:intergenic |
| TCTTGATCATATTCGGTTAA+AGG | 0.239859 | 4.2:+2627890 | None:intergenic |
| TGTCTCTTCCTAGTTTCTTC+AGG | 0.289084 | 4.2:+2626795 | None:intergenic |
| GTGGCATACCTAAGTATAAA+AGG | 0.291655 | 4.2:+2627629 | None:intergenic |
| CTTCCAACCTCTTTCAGATC+TGG | 0.295103 | 4.2:+2627057 | None:intergenic |
| CGTGTCCTTCGTGTACATTT+AGG | 0.310233 | 4.2:-2629423 | MS.gene015822:CDS |
| AAGCAAATTGAAGGATATAT+TGG | 0.315046 | 4.2:-2627037 | MS.gene015822:CDS |
| TGGCATAAGGCCATGCCATT+TGG | 0.317100 | 4.2:+2628081 | None:intergenic |
| ATCAAGATCTTGATCATATT+CGG | 0.322885 | 4.2:+2627883 | None:intergenic |
| GCAATTGAGGTTTGCTTCAC+AGG | 0.339001 | 4.2:+2629125 | None:intergenic |
| GGCATAAGGCCATGCCATTT+GGG | 0.361343 | 4.2:+2628082 | None:intergenic |
| GCTTCTCACTCTCAGTATTT+GGG | 0.370715 | 4.2:-2626587 | MS.gene015822:CDS |
| AGCAAGGCGTGCACCGCGAC+TGG | 0.377407 | 4.2:+2626838 | None:intergenic |
| TATGTTGATAATCTTCCTAC+TGG | 0.383423 | 4.2:-2630304 | MS.gene015822:CDS |
| ATTGCTTTCTGGCATGTACT+TGG | 0.384273 | 4.2:-2627735 | MS.gene015822:CDS |
| CGCCGCGGCACAAACGGCGG+CGG | 0.385038 | 4.2:+2630516 | None:intergenic |
| GCTGCTGTGATTCTCGGTAC+TGG | 0.385075 | 4.2:-2628142 | MS.gene015822:CDS |
| CACTAAATTCAGAGTTTGCT+TGG | 0.390939 | 4.2:-2626708 | MS.gene015822:CDS |
| AAGAGCCGCCGCGGCACAAA+CGG | 0.391798 | 4.2:+2630510 | None:intergenic |
| AAGCAAACCTCAATTGCATC+TGG | 0.396002 | 4.2:-2629119 | MS.gene015822:CDS |
| GGTGCACGCCTTGCTGCTGC+TGG | 0.404478 | 4.2:-2626830 | MS.gene015822:CDS |
| ATCATAATTACCTGTTCTCC+AGG | 0.409907 | 4.2:+2627845 | None:intergenic |
| GTCATTGCTGCTGTGATTCT+CGG | 0.415176 | 4.2:-2628148 | MS.gene015822:CDS |
| CACGCTTACCTCTGAAGAAC+CGG | 0.421516 | 4.2:+2629335 | None:intergenic |
| TGCCGCCGCCGTTTGTGCCG+CGG | 0.424501 | 4.2:-2630518 | MS.gene015822:CDS |
| TATGCCAAAATCAGGAGATA+TGG | 0.424699 | 4.2:-2628065 | MS.gene015822:intron |
| GTAGGTTATAAACATGGAAT+GGG | 0.432293 | 4.2:-2627936 | MS.gene015822:intron |
| CTCTATTATGCTCTAGATCT+TGG | 0.434188 | 4.2:-2629459 | MS.gene015822:CDS |
| GGTGGAGGATGAAAACCTTC+AGG | 0.434285 | 4.2:+2629185 | None:intergenic |
| TTGAAACTTCATCAAACTCT+TGG | 0.434603 | 4.2:+2629376 | None:intergenic |
| ATGTAGGTTAATGATACAAT+TGG | 0.441510 | 4.2:-2628205 | MS.gene015822:intron |
| GCTAATGATGGTTCAGGCAT+TGG | 0.443734 | 4.2:-2626626 | MS.gene015822:CDS |
| ACTAGGAAGAGACACAGTTA+AGG | 0.444325 | 4.2:-2626786 | MS.gene015822:CDS |
| GAGCATGCTAATGATGGTTC+AGG | 0.445261 | 4.2:-2626632 | MS.gene015822:CDS |
| CCGAGTTCTCTTTGTCTGCC+AGG | 0.447341 | 4.2:+2629164 | None:intergenic |
| GATACAATTGGAACATTGGC+TGG | 0.447474 | 4.2:-2628193 | MS.gene015822:CDS |
| AAGCTTAAACCCTGGAGAAC+AGG | 0.452669 | 4.2:-2627855 | MS.gene015822:intron |
| TTGCTTTCTGGCATGTACTT+GGG | 0.455566 | 4.2:-2627734 | MS.gene015822:CDS |
| TGCTTTCTGGCATGTACTTG+GGG | 0.456526 | 4.2:-2627733 | MS.gene015822:CDS |
| ACGGAGAGCTTTGTTGAAGA+TGG | 0.457787 | 4.2:-2627702 | MS.gene015822:CDS |
| CATGGCCTTATGCCAAAATC+AGG | 0.461136 | 4.2:-2628073 | MS.gene015822:CDS |
| TCTCTTTGTCTGCCAGGTGG+AGG | 0.463034 | 4.2:+2629170 | None:intergenic |
| GAAAAGTGTGAGACACCAAT+TGG | 0.463065 | 4.2:-2630418 | MS.gene015822:CDS |
| TGTAGGTTATAAACATGGAA+TGG | 0.471322 | 4.2:-2627937 | MS.gene015822:intron |
| TAGACAGTTGGCTGATGCTA+TGG | 0.474066 | 4.2:-2630389 | MS.gene015822:CDS |
| TTGGGAATCCTGAAGAAACT+AGG | 0.478456 | 4.2:-2626803 | MS.gene015822:CDS |
| CTGCTGTGATTCTCGGTACT+GGG | 0.480970 | 4.2:-2628141 | MS.gene015822:CDS |
| TAGAGTCCCAGATGCAATTG+AGG | 0.487255 | 4.2:+2629112 | None:intergenic |
| GACTCTAATAAAGTGGACTA+AGG | 0.488261 | 4.2:-2629096 | MS.gene015822:CDS |
| GGGAGAACTAACCAAGTCCT+TGG | 0.493228 | 4.2:-2628449 | MS.gene015822:CDS |
| AACTGTCTAAGCTTTCCAAT+TGG | 0.495017 | 4.2:+2630403 | None:intergenic |
| TGGTGTTGTGTCGTGGTGCA+TGG | 0.502741 | 4.2:+2627077 | None:intergenic |
| GTATGATAAGTTCGAGAAAG+TGG | 0.505548 | 4.2:-2630474 | MS.gene015822:CDS |
| AGCCGCCGCGGCACAAACGG+CGG | 0.505594 | 4.2:+2630513 | None:intergenic |
| CAATTGAGGTTTGCTTCACA+GGG | 0.506739 | 4.2:+2629126 | None:intergenic |
| TCACATTATTTGCAGGGATG+AGG | 0.508861 | 4.2:-2629487 | MS.gene015822:intron |
| ATCCCTCCTCAATTGATGAC+CGG | 0.509765 | 4.2:-2629354 | MS.gene015822:CDS |
| CGCCGCCGTTTGTGCCGCGG+CGG | 0.515327 | 4.2:-2630515 | MS.gene015822:CDS |
| TAATGATACAATTGGAACAT+TGG | 0.520504 | 4.2:-2628197 | MS.gene015822:CDS |
| GAGCTGCAACACGCATATCC+AGG | 0.521304 | 4.2:+2628416 | None:intergenic |
| CTAGGAAGAGACACAGTTAA+GGG | 0.522099 | 4.2:-2626785 | MS.gene015822:CDS |
| TGGAGGCAGATTCTACAATC+AGG | 0.523047 | 4.2:-2628173 | MS.gene015822:CDS |
| CATGCTGGTCTTGCATCTGA+AGG | 0.526173 | 4.2:-2630355 | MS.gene015822:CDS |
| TTGTGCCGCGGCGGCTCTTG+TGG | 0.527226 | 4.2:-2630506 | MS.gene015822:CDS |
| GTCGTTGAGCATGCTAATGA+TGG | 0.530025 | 4.2:-2626638 | MS.gene015822:CDS |
| CAGTGATAGCATTGGATGGA+GGG | 0.537158 | 4.2:-2626745 | MS.gene015822:CDS |
| CATTTAGGTGGAAAAGAGAA+AGG | 0.537341 | 4.2:-2629408 | MS.gene015822:CDS |
| AGAGGTTGGAAGCAAATTGA+AGG | 0.538515 | 4.2:-2627046 | MS.gene015822:CDS |
| GAAGGAACTGCTTGGAGATG+AGG | 0.540931 | 4.2:-2626675 | MS.gene015822:CDS |
| TAAGGTCGCGGTGGGAGCTG+CGG | 0.541422 | 4.2:-2630548 | MS.gene015822:CDS |
| CATCTGGGACTCTAATAAAG+TGG | 0.541566 | 4.2:-2629103 | MS.gene015822:CDS |
| ATGGATGTTGAGATGCATGC+TGG | 0.543124 | 4.2:-2630370 | MS.gene015822:CDS |
| ACGCGCATGCTATTCCCAAA+TGG | 0.545349 | 4.2:-2628096 | MS.gene015822:CDS |
| TAAGATTTGAGTGATGGGTA+AGG | 0.546558 | 4.2:-2630566 | None:intergenic |
| GTCCTTCGTGTACATTTAGG+TGG | 0.550016 | 4.2:-2629420 | MS.gene015822:CDS |
| GATGCTGAAAGCTTAAACCC+TGG | 0.551347 | 4.2:-2627863 | MS.gene015822:CDS |
| TAAATTCAGAGTTTGCTTGG+AGG | 0.552574 | 4.2:-2626705 | MS.gene015822:CDS |
| GAAGAACCGGTCATCAATTG+AGG | 0.558178 | 4.2:+2629348 | None:intergenic |
| TATTATGCTCTAGATCTTGG+TGG | 0.558418 | 4.2:-2629456 | MS.gene015822:CDS |
| CAAATTGAAGGATATATTGG+AGG | 0.558923 | 4.2:-2627034 | MS.gene015822:intron |
| AATTGGAAAGCTTAGACAGT+TGG | 0.560728 | 4.2:-2630401 | MS.gene015822:CDS |
| GCAAAAGTCAGTGATAGCAT+TGG | 0.560739 | 4.2:-2626753 | MS.gene015822:CDS |
| ACACCAGATCTGAAAGAGGT+TGG | 0.565677 | 4.2:-2627060 | MS.gene015822:CDS |
| CCGCGGCGGCTCTTGTGGTG+CGG | 0.566167 | 4.2:-2630501 | MS.gene015822:CDS |
| GCTGGTCTTGCATCTGAAGG+TGG | 0.566582 | 4.2:-2630352 | MS.gene015822:CDS |
| CACAACACCAGATCTGAAAG+AGG | 0.571670 | 4.2:-2627064 | MS.gene015822:CDS |
| AGCAAACCTCAATTGCATCT+GGG | 0.578513 | 4.2:-2629118 | MS.gene015822:CDS |
| TTTGTTGAGTCAGAACCTGA+AGG | 0.578841 | 4.2:-2629200 | MS.gene015822:CDS |
| TTGAGTGATGGGTAAGGTCG+CGG | 0.581116 | 4.2:-2630560 | None:intergenic |
| TGTGACATTGTCGCCAGTCG+CGG | 0.581524 | 4.2:-2626851 | MS.gene015822:CDS |
| GATACGCTGAAGGAACTGCT+TGG | 0.583463 | 4.2:-2626683 | MS.gene015822:CDS |
| ACTCTAATAAAGTGGACTAA+GGG | 0.584848 | 4.2:-2629095 | MS.gene015822:CDS |
| CCAAAATACCAGCAGCAGCA+AGG | 0.587377 | 4.2:+2626822 | None:intergenic |
| ATTATTTGCAGGGATGAGGA+AGG | 0.587877 | 4.2:-2629483 | MS.gene015822:intron |
| ACTTTCTCGAACTTATCATA+CGG | 0.588844 | 4.2:+2630476 | None:intergenic |
| CATGCTATTCCCAAATGGCA+TGG | 0.591206 | 4.2:-2628091 | MS.gene015822:CDS |
| ATTGATGACCGGTTCTTCAG+AGG | 0.592464 | 4.2:-2629343 | MS.gene015822:intron |
| GTAGGTTGGCGAAGATGTGG+TGG | 0.593075 | 4.2:-2628470 | MS.gene015822:intron |
| CCTGGCAGACAAAGAGAACT+CGG | 0.593630 | 4.2:-2629164 | MS.gene015822:CDS |
| GAGAAAGTGGACACGTAGCG+TGG | 0.594090 | 4.2:-2630461 | MS.gene015822:CDS |
| TTAAAGGAAGATGTGATGAT+CGG | 0.599131 | 4.2:+2627906 | None:intergenic |
| AAGTCAGTGATAGCATTGGA+TGG | 0.608938 | 4.2:-2626749 | MS.gene015822:CDS |
| TCATAATTACCTGTTCTCCA+GGG | 0.609665 | 4.2:+2627846 | None:intergenic |
| TTGCTTGGAGGATACGCTGA+AGG | 0.610887 | 4.2:-2626693 | MS.gene015822:CDS |
| TCAGTGATAGCATTGGATGG+AGG | 0.611893 | 4.2:-2626746 | MS.gene015822:CDS |
| GAACCGGTCATCAATTGAGG+AGG | 0.615013 | 4.2:+2629351 | None:intergenic |
| TCAGATCTGGTGTTGTGTCG+TGG | 0.616704 | 4.2:+2627070 | None:intergenic |
| AGTGATGGGTAAGGTCGCGG+TGG | 0.620275 | 4.2:-2630557 | None:intergenic |
| CTTGTAGGTTGGCGAAGATG+TGG | 0.620866 | 4.2:-2628473 | MS.gene015822:intron |
| TTTGTTGAAGATGGCCGAAG+AGG | 0.622326 | 4.2:-2627693 | MS.gene015822:CDS |
| AGTTCTCTTTGTCTGCCAGG+TGG | 0.622694 | 4.2:+2629167 | None:intergenic |
| TGGTGCATGGAAGACATGTC+AGG | 0.624431 | 4.2:+2627090 | None:intergenic |
| GCTTTCTGGCATGTACTTGG+GGG | 0.629925 | 4.2:-2627732 | MS.gene015822:CDS |
| GTGATGGGTAAGGTCGCGGT+GGG | 0.648560 | 4.2:-2630556 | MS.gene015822:CDS |
| CCGCACCACAAGAGCCGCCG+CGG | 0.648816 | 4.2:+2630501 | None:intergenic |
| CTAAATGTACACGAAGGACA+CGG | 0.650048 | 4.2:+2629424 | None:intergenic |
| ATGTTGATAATCTTCCTACT+GGG | 0.651766 | 4.2:-2630303 | MS.gene015822:intron |
| GGAAGAGACACAGTTAAGGG+TGG | 0.653081 | 4.2:-2626782 | MS.gene015822:CDS |
| AATACTGTAGGTTATAAACA+TGG | 0.656730 | 4.2:-2627942 | MS.gene015822:intron |
| AACCGGTCATCAATTGAGGA+GGG | 0.663823 | 4.2:+2629352 | None:intergenic |
| ATTAGCATGCTCAACGACAA+CGG | 0.666183 | 4.2:+2626643 | None:intergenic |
| TAGGTTGGCGAAGATGTGGT+GGG | 0.672008 | 4.2:-2628469 | MS.gene015822:CDS |
| TAGTGACTGACTGACCCAGT+AGG | 0.676585 | 4.2:+2630289 | None:intergenic |
| TAGGTTATAAACATGGAATG+GGG | 0.681790 | 4.2:-2627935 | MS.gene015822:CDS |
| ACAATTGGAACATTGGCTGG+AGG | 0.694331 | 4.2:-2628190 | MS.gene015822:CDS |
| TTCCACCTAAATGTACACGA+AGG | 0.716522 | 4.2:+2629418 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAATTGTAAAAGAAAT+AGG | + | chr4.2:2628364-2628383 | None:intergenic | 10.0% |
| !!! | ATTTTTTTTTATTTGACTTT+TGG | - | chr4.2:2627140-2627159 | MS.gene015822:intron | 10.0% |
| !! | TAGGAAAATAAAAACAAAAA+AGG | + | chr4.2:2629779-2629798 | None:intergenic | 15.0% |
| !!! | GTTTTAACATCTTTTATATT+AGG | - | chr4.2:2630008-2630027 | MS.gene015822:intron | 15.0% |
| !!! | TGATTTTAAATGAATTGATT+CGG | + | chr4.2:2627361-2627380 | None:intergenic | 15.0% |
| !!! | TTTTGACATATTTGAATATT+TGG | - | chr4.2:2627197-2627216 | MS.gene015822:intron | 15.0% |
| !! | AAATTACTTCTAAATACTGT+AGG | - | chr4.2:2629170-2629189 | MS.gene015822:CDS | 20.0% |
| !! | AATGTGAAAAATTACTCAAA+GGG | + | chr4.2:2627616-2627635 | None:intergenic | 20.0% |
| !! | AGGAATTTACATGATTATAA+TGG | - | chr4.2:2627436-2627455 | MS.gene015822:intron | 20.0% |
| !! | AGTCAATGTAAAAAGAATTA+CGG | + | chr4.2:2628072-2628091 | None:intergenic | 20.0% |
| !! | ATACATCATGTATAAATAAG+TGG | + | chr4.2:2627292-2627311 | None:intergenic | 20.0% |
| !! | ATGCTAATGATTCAAAAAAT+AGG | + | chr4.2:2629798-2629817 | None:intergenic | 20.0% |
| !! | GGAATTTACATGATTATAAT+GGG | - | chr4.2:2627437-2627456 | MS.gene015822:intron | 20.0% |
| !! | TACAGTATTTAGAAGTAATT+TGG | + | chr4.2:2629171-2629190 | None:intergenic | 20.0% |
| !! | TACATCATGTATAAATAAGT+GGG | + | chr4.2:2627291-2627310 | None:intergenic | 20.0% |
| !!! | AACAAGTTAGTTTTATTTAG+AGG | + | chr4.2:2628893-2628912 | None:intergenic | 20.0% |
| !!! | ATAAAAGGAATTTTCAACTT+AGG | + | chr4.2:2629483-2629502 | None:intergenic | 20.0% |
| !!! | TAAAAGGAATTTTCAACTTA+GGG | + | chr4.2:2629482-2629501 | None:intergenic | 20.0% |
| !!! | TAATGTTTTTAGAAGTAAAC+AGG | - | chr4.2:2628560-2628579 | MS.gene015822:intron | 20.0% |
| !!! | TGAAAATTCCTTTTATACTT+AGG | - | chr4.2:2629487-2629506 | MS.gene015822:intron | 20.0% |
| !!! | TTTTTAGTTTTAGCAATTCT+TGG | - | chr4.2:2628851-2628870 | MS.gene015822:intron | 20.0% |
| ! | AAAAGGAATCATTATTGACA+TGG | + | chr4.2:2629525-2629544 | None:intergenic | 25.0% |
| ! | AAATACAGAAATCCTAAAAG+AGG | + | chr4.2:2628750-2628769 | None:intergenic | 25.0% |
| ! | AACACAAAATCAAATGCTTT+GGG | + | chr4.2:2627550-2627569 | None:intergenic | 25.0% |
| ! | AAGCAAATTGAAGGATATAT+TGG | - | chr4.2:2630087-2630106 | MS.gene015822:intron | 25.0% |
| ! | AATACTGTAGGTTATAAACA+TGG | - | chr4.2:2629182-2629201 | MS.gene015822:CDS | 25.0% |
| ! | AATTCATTTCTGATGAAAAG+TGG | + | chr4.2:2627332-2627351 | None:intergenic | 25.0% |
| ! | AGAAATAGGAAGAGAAATAT+TGG | + | chr4.2:2628350-2628369 | None:intergenic | 25.0% |
| ! | ATCAAGATCTTGATCATATT+CGG | + | chr4.2:2629244-2629263 | None:intergenic | 25.0% |
| ! | ATGAAAGTTGTATTTCAACA+TGG | + | chr4.2:2630133-2630152 | None:intergenic | 25.0% |
| ! | ATGTAGGTTAATGATACAAT+TGG | - | chr4.2:2628919-2628938 | MS.gene015822:intron | 25.0% |
| ! | ATTCATGCAATTAATAACCA+AGG | + | chr4.2:2629556-2629575 | None:intergenic | 25.0% |
| ! | ATTCATTTCTGATGAAAAGT+GGG | + | chr4.2:2627331-2627350 | None:intergenic | 25.0% |
| ! | CAATGTGAAAAATTACTCAA+AGG | + | chr4.2:2627617-2627636 | None:intergenic | 25.0% |
| ! | GTATTAGATATCTGACAAAA+AGG | + | chr4.2:2630219-2630238 | None:intergenic | 25.0% |
| ! | TAAATAACAACACGAAACAA+TGG | + | chr4.2:2628122-2628141 | None:intergenic | 25.0% |
| ! | TAATGATACAATTGGAACAT+TGG | - | chr4.2:2628927-2628946 | MS.gene015822:intron | 25.0% |
| !! | AAAAGGAATTTTCAACTTAG+GGG | + | chr4.2:2629481-2629500 | None:intergenic | 25.0% |
| !! | AAAGAAAAGTTGTTGATTAG+AGG | - | chr4.2:2627099-2627118 | MS.gene015822:intron | 25.0% |
| !! | ATTTACATGATTATAATGGG+AGG | - | chr4.2:2627440-2627459 | MS.gene015822:intron | 25.0% |
| !! | CTTTTACCTAGAATCAATAA+GGG | + | chr4.2:2629673-2629692 | None:intergenic | 25.0% |
| !! | TACAATTTTGAACCATTATG+AGG | + | chr4.2:2628265-2628284 | None:intergenic | 25.0% |
| !! | TTCTGAAAACAGAGAAAAAT+GGG | + | chr4.2:2628586-2628605 | None:intergenic | 25.0% |
| !! | TTTCTGAAAACAGAGAAAAA+TGG | + | chr4.2:2628587-2628606 | None:intergenic | 25.0% |
| !!! | ATTTTTGAGAAATTGCTTTC+TGG | - | chr4.2:2629378-2629397 | MS.gene015822:CDS | 25.0% |
| !!! | TGATTTTGTTGTTTGTTACA+GGG | - | chr4.2:2627867-2627886 | MS.gene015822:CDS | 25.0% |
| !!! | TTGATTTTGTTGTTTGTTAC+AGG | - | chr4.2:2627866-2627885 | MS.gene015822:CDS | 25.0% |
| !!! | TTTTATTTGACTTTTGGACA+TGG | - | chr4.2:2627146-2627165 | MS.gene015822:intron | 25.0% |
| AAAGCTTGGATGAATGAAAA+TGG | - | chr4.2:2629689-2629708 | MS.gene015822:intron | 30.0% | |
| AAGATTTATGTAACTCAGCA+GGG | + | chr4.2:2629947-2629966 | None:intergenic | 30.0% | |
| AATTTGTCTCTGACTGAATT+TGG | - | chr4.2:2628802-2628821 | MS.gene015822:intron | 30.0% | |
| ACACAACAACAAAAAGAGAA+AGG | + | chr4.2:2628209-2628228 | None:intergenic | 30.0% | |
| ACATTGTCACATTATTTGCA+GGG | - | chr4.2:2627631-2627650 | MS.gene015822:intron | 30.0% | |
| ACTATATAGGATGATATGTG+AGG | + | chr4.2:2630157-2630176 | None:intergenic | 30.0% | |
| ACTTTCTCGAACTTATCATA+CGG | + | chr4.2:2626651-2626670 | None:intergenic | 30.0% | |
| ATTTAGAAGTAATTTGGCAC+CGG | + | chr4.2:2629165-2629184 | None:intergenic | 30.0% | |
| CAAATTGAAGGATATATTGG+AGG | - | chr4.2:2630090-2630109 | MS.gene015822:intron | 30.0% | |
| CAACACAAAATCAAATGCTT+TGG | + | chr4.2:2627551-2627570 | None:intergenic | 30.0% | |
| CAATAAGGGTGAAAATAAGA+GGG | + | chr4.2:2629659-2629678 | None:intergenic | 30.0% | |
| CTAATACATCACTAAAAACG+AGG | - | chr4.2:2630232-2630251 | MS.gene015822:intron | 30.0% | |
| CTTATCCATTTGAGAGAAAA+TGG | + | chr4.2:2630181-2630200 | None:intergenic | 30.0% | |
| GTAGGTTATAAACATGGAAT+GGG | - | chr4.2:2629188-2629207 | MS.gene015822:CDS | 30.0% | |
| TAACCAAGGCTAAGTATAAA+AGG | + | chr4.2:2629542-2629561 | None:intergenic | 30.0% | |
| TACAATCACAAATCATGGAT+TGG | + | chr4.2:2627052-2627071 | None:intergenic | 30.0% | |
| TAGGTTATAAACATGGAATG+GGG | - | chr4.2:2629189-2629208 | MS.gene015822:CDS | 30.0% | |
| TCAATAAGGGTGAAAATAAG+AGG | + | chr4.2:2629660-2629679 | None:intergenic | 30.0% | |
| TCAGAAATTCTCTCATTGAA+TGG | - | chr4.2:2628600-2628619 | MS.gene015822:intron | 30.0% | |
| TCATAGTGTTTACCTCATAA+TGG | - | chr4.2:2628250-2628269 | MS.gene015822:intron | 30.0% | |
| TCATTATTGACATGGTTTAG+TGG | + | chr4.2:2629517-2629536 | None:intergenic | 30.0% | |
| TCTTGATCATATTCGGTTAA+AGG | + | chr4.2:2629237-2629256 | None:intergenic | 30.0% | |
| TGGTAAGGTTATGAGTAATT+AGG | - | chr4.2:2629079-2629098 | MS.gene015822:CDS | 30.0% | |
| TGTAGGTTATAAACATGGAA+TGG | - | chr4.2:2629187-2629206 | MS.gene015822:CDS | 30.0% | |
| TTAAAGGAAGATGTGATGAT+CGG | + | chr4.2:2629221-2629240 | None:intergenic | 30.0% | |
| TTGAAACTTCATCAAACTCT+TGG | + | chr4.2:2627751-2627770 | None:intergenic | 30.0% | |
| TTTGTGATTGTATCTGGTAT+TGG | - | chr4.2:2627060-2627079 | MS.gene015822:CDS | 30.0% | |
| ! | AAAGGAATTTTCAACTTAGG+GGG | + | chr4.2:2629480-2629499 | None:intergenic | 30.0% |
| ! | AGACAATGAAAACAGTGTTT+TGG | + | chr4.2:2628423-2628442 | None:intergenic | 30.0% |
| ! | ATTCCTTTTATACTTAGCCT+TGG | - | chr4.2:2629536-2629555 | MS.gene015822:intron | 30.0% |
| ! | ATTGATTCTAGGTAAAAGCT+TGG | - | chr4.2:2629675-2629694 | MS.gene015822:intron | 30.0% |
| ! | CAAAAAAGGTATGTTACTAC+TGG | + | chr4.2:2629765-2629784 | None:intergenic | 30.0% |
| ! | GATTTTGTGTTGTGAAAGTT+TGG | - | chr4.2:2627559-2627578 | MS.gene015822:intron | 30.0% |
| ! | GCTTTTACCTAGAATCAATA+AGG | + | chr4.2:2629674-2629693 | None:intergenic | 30.0% |
| ! | TTTTAGTCATTAAGCAGCAT+AGG | + | chr4.2:2626952-2626971 | None:intergenic | 30.0% |
| ! | TTTTATCCTAACGCAAAAGT+AGG | - | chr4.2:2629823-2629842 | MS.gene015822:intron | 30.0% |
| !! | ACTCTAATAAAGTGGACTAA+GGG | - | chr4.2:2628029-2628048 | MS.gene015822:intron | 30.0% |
| !! | ATGTTGATAATCTTCCTACT+GGG | - | chr4.2:2626821-2626840 | MS.gene015822:CDS | 30.0% |
| !! | CTAACTTGTTGATGTTATGT+AGG | - | chr4.2:2628903-2628922 | MS.gene015822:intron | 30.0% |
| !! | TATGTTGATAATCTTCCTAC+TGG | - | chr4.2:2626820-2626839 | MS.gene015822:CDS | 30.0% |
| !! | TTTGGAGTTACAAGGTTTTA+TGG | - | chr4.2:2628820-2628839 | MS.gene015822:intron | 30.0% |
| !!! | TTTTCACCCTTATTGATTCT+AGG | - | chr4.2:2629664-2629683 | MS.gene015822:intron | 30.0% |
| AAAAACGAGGAAGATTGTTG+TGG | - | chr4.2:2630245-2630264 | MS.gene015822:intron | 35.0% | |
| AACTGTCTAAGCTTTCCAAT+TGG | + | chr4.2:2626724-2626743 | None:intergenic | 35.0% | |
| AAGGATGCTACAAATTCACA+TGG | + | chr4.2:2629335-2629354 | None:intergenic | 35.0% | |
| AATAAGGAGTTCTGCTTGTA+TGG | + | chr4.2:2629893-2629912 | None:intergenic | 35.0% | |
| AATTGGAAAGCTTAGACAGT+TGG | - | chr4.2:2626723-2626742 | MS.gene015822:CDS | 35.0% | |
| ACCAAGTCCTTGGAAAAAAT+TGG | - | chr4.2:2628685-2628704 | MS.gene015822:intron | 35.0% | |
| AGGGTAAAACAGGTGATAAA+GGG | + | chr4.2:2629928-2629947 | None:intergenic | 35.0% | |
| AGGGTGAAGGAATGAAAATA+AGG | + | chr4.2:2629909-2629928 | None:intergenic | 35.0% | |
| ATCATAATTACCTGTTCTCC+AGG | + | chr4.2:2629282-2629301 | None:intergenic | 35.0% | |
| ATTCGAATGTTGTAGCACTT+AGG | - | chr4.2:2627416-2627435 | MS.gene015822:intron | 35.0% | |
| CAAAATCAGGAGATATGGTA+AGG | - | chr4.2:2629064-2629083 | MS.gene015822:intron | 35.0% | |
| CACATTGTCACATTATTTGC+AGG | - | chr4.2:2627630-2627649 | MS.gene015822:intron | 35.0% | |
| CATTTAGGTGGAAAAGAGAA+AGG | - | chr4.2:2627716-2627735 | MS.gene015822:CDS | 35.0% | |
| CCAGATACAATCACAAATCA+TGG | + | chr4.2:2627057-2627076 | None:intergenic | 35.0% | |
| GAAGATTTATGTAACTCAGC+AGG | + | chr4.2:2629948-2629967 | None:intergenic | 35.0% | |
| GAGAGAAAATGGCACTATAT+AGG | + | chr4.2:2630170-2630189 | None:intergenic | 35.0% | |
| GAGAGACTCATTTAAGTATC+TGG | + | chr4.2:2628166-2628185 | None:intergenic | 35.0% | |
| GAGGCTAAAAACAATTGTAG+AGG | + | chr4.2:2627253-2627272 | None:intergenic | 35.0% | |
| GAGGTAAACACTATGATATC+TGG | + | chr4.2:2628246-2628265 | None:intergenic | 35.0% | |
| GAGTCTTTCATCTCATTGTT+AGG | - | chr4.2:2628498-2628517 | MS.gene015822:intron | 35.0% | |
| GATGATTCAGTCACATTGAA+TGG | - | chr4.2:2627512-2627531 | MS.gene015822:intron | 35.0% | |
| GTATGATAAGTTCGAGAAAG+TGG | - | chr4.2:2626650-2626669 | MS.gene015822:CDS | 35.0% | |
| GTGGCATACCTAAGTATAAA+AGG | + | chr4.2:2629498-2629517 | None:intergenic | 35.0% | |
| TATGCCAAAATCAGGAGATA+TGG | - | chr4.2:2629059-2629078 | MS.gene015822:intron | 35.0% | |
| TCATAATTACCTGTTCTCCA+GGG | + | chr4.2:2629281-2629300 | None:intergenic | 35.0% | |
| TCTCAAAAATCTGTGAACGA+TGG | + | chr4.2:2629368-2629387 | None:intergenic | 35.0% | |
| TTTAGAAGTAATTTGGCACC+GGG | + | chr4.2:2629164-2629183 | None:intergenic | 35.0% | |
| ! | CACTAAATTCAGAGTTTGCT+TGG | - | chr4.2:2630416-2630435 | MS.gene015822:CDS | 35.0% |
| ! | CCATGATTTGTGATTGTATC+TGG | - | chr4.2:2627054-2627073 | MS.gene015822:CDS | 35.0% |
| ! | CTCTATTATGCTCTAGATCT+TGG | - | chr4.2:2627665-2627684 | MS.gene015822:CDS | 35.0% |
| ! | CTTACCATATCTCCTGATTT+TGG | + | chr4.2:2629066-2629085 | None:intergenic | 35.0% |
| ! | TAAATTCAGAGTTTGCTTGG+AGG | - | chr4.2:2630419-2630438 | MS.gene015822:CDS | 35.0% |
| ! | TATTATGCTCTAGATCTTGG+TGG | - | chr4.2:2627668-2627687 | MS.gene015822:CDS | 35.0% |
| ! | TGACTGAATTTGGAGTTACA+AGG | - | chr4.2:2628812-2628831 | MS.gene015822:intron | 35.0% |
| ! | TGGGTTGAACAGTAAATTTG+AGG | + | chr4.2:2627272-2627291 | None:intergenic | 35.0% |
| !! | GACTCTAATAAAGTGGACTA+AGG | - | chr4.2:2628028-2628047 | MS.gene015822:intron | 35.0% |
| !! | GAGATCACATGTTTTGTTAC+TGG | + | chr4.2:2627480-2627499 | None:intergenic | 35.0% |
| !! | GATCATTTTAGTATCAGCCT+TGG | - | chr4.2:2629631-2629650 | MS.gene015822:intron | 35.0% |
| !! | TATCTCCTGATTTTGGCATA+AGG | + | chr4.2:2629059-2629078 | None:intergenic | 35.0% |
| !! | TGGCTATTTTGAAGGAGTTT+GGG | - | chr4.2:2626683-2626702 | MS.gene015822:CDS | 35.0% |
| !!! | TAGTGCCATTTTCTCTCAAA+TGG | - | chr4.2:2630173-2630192 | MS.gene015822:intron | 35.0% |
| AAACAGGTGATAAAGGGTGA+AGG | + | chr4.2:2629922-2629941 | None:intergenic | 40.0% | |
| AAGCAAACCTCAATTGCATC+TGG | - | chr4.2:2628005-2628024 | MS.gene015822:intron | 40.0% | |
| ACTAGGAAGAGACACAGTTA+AGG | - | chr4.2:2630338-2630357 | MS.gene015822:CDS | 40.0% | |
| AGAGGTTGGAAGCAAATTGA+AGG | - | chr4.2:2630078-2630097 | MS.gene015822:intron | 40.0% | |
| AGCAAACCTCAATTGCATCT+GGG | - | chr4.2:2628006-2628025 | MS.gene015822:intron | 40.0% | |
| AGCTTCTCACTCTCAGTATT+TGG | - | chr4.2:2630536-2630555 | MS.gene015822:CDS | 40.0% | |
| ATTAGCATGCTCAACGACAA+CGG | + | chr4.2:2630484-2630503 | None:intergenic | 40.0% | |
| ATTATTTGCAGGGATGAGGA+AGG | - | chr4.2:2627641-2627660 | MS.gene015822:CDS | 40.0% | |
| CAAAAATCTGTGAACGATGG+TGG | + | chr4.2:2629365-2629384 | None:intergenic | 40.0% | |
| CAGGGTAAAACAGGTGATAA+AGG | + | chr4.2:2629929-2629948 | None:intergenic | 40.0% | |
| CTAAATGTACACGAAGGACA+CGG | + | chr4.2:2627703-2627722 | None:intergenic | 40.0% | |
| CTAGGAAGAGACACAGTTAA+GGG | - | chr4.2:2630339-2630358 | MS.gene015822:CDS | 40.0% | |
| GATACAATTGGAACATTGGC+TGG | - | chr4.2:2628931-2628950 | MS.gene015822:intron | 40.0% | |
| GCAAAAGTCAGTGATAGCAT+TGG | - | chr4.2:2630371-2630390 | MS.gene015822:CDS | 40.0% | |
| GCTTCTCACTCTCAGTATTT+GGG | - | chr4.2:2630537-2630556 | MS.gene015822:CDS | 40.0% | |
| GTGAAAATAAGAGGGAACCA+AGG | + | chr4.2:2629651-2629670 | None:intergenic | 40.0% | |
| GTGACTGAATCATCAACAAG+TGG | + | chr4.2:2627506-2627525 | None:intergenic | 40.0% | |
| TCACATTATTTGCAGGGATG+AGG | - | chr4.2:2627637-2627656 | MS.gene015822:intron | 40.0% | |
| TCCGAAAAATTCAGCCTCTT+CGG | + | chr4.2:2629448-2629467 | None:intergenic | 40.0% | |
| TCTATCACTTGCTTGTAGGT+TGG | - | chr4.2:2628640-2628659 | MS.gene015822:intron | 40.0% | |
| TCTGTTCAGACTTCTTCATG+TGG | - | chr4.2:2629609-2629628 | MS.gene015822:intron | 40.0% | |
| TGTACTTGGGGGAAATTGTA+CGG | - | chr4.2:2629403-2629422 | MS.gene015822:CDS | 40.0% | |
| TGTCTCTTCCTAGTTTCTTC+AGG | + | chr4.2:2630332-2630351 | None:intergenic | 40.0% | |
| TGTCTTACGATGCTACTAAG+AGG | - | chr4.2:2629124-2629143 | MS.gene015822:CDS | 40.0% | |
| TTCAGAGGTAAGCGTGTTAT+GGG | - | chr4.2:2627796-2627815 | MS.gene015822:intron | 40.0% | |
| TTCCACCTAAATGTACACGA+AGG | + | chr4.2:2627709-2627728 | None:intergenic | 40.0% | |
| TTGAATGGTCATCTGACAGT+TGG | - | chr4.2:2628615-2628634 | MS.gene015822:intron | 40.0% | |
| TTGGGAATCCTGAAGAAACT+AGG | - | chr4.2:2630321-2630340 | MS.gene015822:CDS | 40.0% | |
| TTTGTTGAGTCAGAACCTGA+AGG | - | chr4.2:2627924-2627943 | MS.gene015822:CDS | 40.0% | |
| ! | AAGTCAGTGATAGCATTGGA+TGG | - | chr4.2:2630375-2630394 | MS.gene015822:CDS | 40.0% |
| ! | ATTGCTTTCTGGCATGTACT+TGG | - | chr4.2:2629389-2629408 | MS.gene015822:CDS | 40.0% |
| ! | CAATTGAGGTTTGCTTCACA+GGG | + | chr4.2:2628001-2628020 | None:intergenic | 40.0% |
| ! | CAGTCTCATTCTCCTCTTTT+AGG | - | chr4.2:2628735-2628754 | MS.gene015822:intron | 40.0% |
| ! | CATCTGGGACTCTAATAAAG+TGG | - | chr4.2:2628021-2628040 | MS.gene015822:intron | 40.0% |
| ! | GAAAAGTGTGAGACACCAAT+TGG | - | chr4.2:2626706-2626725 | MS.gene015822:CDS | 40.0% |
| ! | TTGCTTTCTGGCATGTACTT+GGG | - | chr4.2:2629390-2629409 | MS.gene015822:CDS | 40.0% |
| !! | AAGTGGGTTGAACGTATGTT+TGG | + | chr4.2:2627315-2627334 | None:intergenic | 40.0% |
| !! | GGCTATTTTGAAGGAGTTTG+GGG | - | chr4.2:2626684-2626703 | MS.gene015822:CDS | 40.0% |
| !! | GTGGCTATTTTGAAGGAGTT+TGG | - | chr4.2:2626682-2626701 | MS.gene015822:CDS | 40.0% |
| !! | TCTATGCCTACTTTTGCGTT+AGG | + | chr4.2:2629832-2629851 | None:intergenic | 40.0% |
| !!! | ATCCAGGCCAATTTTTTCCA+AGG | + | chr4.2:2628695-2628714 | None:intergenic | 40.0% |
| !!! | GCCAATTTTTTCCAAGGACT+TGG | + | chr4.2:2628689-2628708 | None:intergenic | 40.0% |
| AACCGGTCATCAATTGAGGA+GGG | + | chr4.2:2627775-2627794 | None:intergenic | 45.0% | |
| AAGCTTAAACCCTGGAGAAC+AGG | - | chr4.2:2629269-2629288 | MS.gene015822:intron | 45.0% | |
| ACACCAGATCTGAAAGAGGT+TGG | - | chr4.2:2630064-2630083 | MS.gene015822:intron | 45.0% | |
| ATGGATGTTGAGATGCATGC+TGG | - | chr4.2:2626754-2626773 | MS.gene015822:CDS | 45.0% | |
| CACAACACCAGATCTGAAAG+AGG | - | chr4.2:2630060-2630079 | MS.gene015822:intron | 45.0% | |
| CATGCTATTCCCAAATGGCA+TGG | - | chr4.2:2629033-2629052 | MS.gene015822:intron | 45.0% | |
| CGTGTCCTTCGTGTACATTT+AGG | - | chr4.2:2627701-2627720 | MS.gene015822:CDS | 45.0% | |
| CTTCAGAGGTAAGCGTGTTA+TGG | - | chr4.2:2627795-2627814 | MS.gene015822:intron | 45.0% | |
| CTTCCAACCTCTTTCAGATC+TGG | + | chr4.2:2630070-2630089 | None:intergenic | 45.0% | |
| GAAGAACCGGTCATCAATTG+AGG | + | chr4.2:2627779-2627798 | None:intergenic | 45.0% | |
| GAGCATGCTAATGATGGTTC+AGG | - | chr4.2:2630492-2630511 | MS.gene015822:CDS | 45.0% | |
| GATGCTGAAAGCTTAAACCC+TGG | - | chr4.2:2629261-2629280 | MS.gene015822:intron | 45.0% | |
| GCTAATGATGGTTCAGGCAT+TGG | - | chr4.2:2630498-2630517 | MS.gene015822:CDS | 45.0% | |
| GGTCTCTATCACTTGCTTGT+AGG | - | chr4.2:2628636-2628655 | MS.gene015822:intron | 45.0% | |
| GTAACTCAGCAGGGTAAAAC+AGG | + | chr4.2:2629938-2629957 | None:intergenic | 45.0% | |
| GTCATTGCTGCTGTGATTCT+CGG | - | chr4.2:2628976-2628995 | MS.gene015822:intron | 45.0% | |
| GTCCTTCGTGTACATTTAGG+TGG | - | chr4.2:2627704-2627723 | MS.gene015822:CDS | 45.0% | |
| GTCCTTGGAAAAAATTGGCC+TGG | - | chr4.2:2628690-2628709 | MS.gene015822:intron | 45.0% | |
| GTCGTTGAGCATGCTAATGA+TGG | - | chr4.2:2630486-2630505 | MS.gene015822:CDS | 45.0% | |
| TAGACAGTTGGCTGATGCTA+TGG | - | chr4.2:2626735-2626754 | MS.gene015822:CDS | 45.0% | |
| TAGAGTCCCAGATGCAATTG+AGG | + | chr4.2:2628015-2628034 | None:intergenic | 45.0% | |
| TGGAGGCAGATTCTACAATC+AGG | - | chr4.2:2628951-2628970 | MS.gene015822:intron | 45.0% | |
| TTACGATGCTACTAAGAGGC+AGG | - | chr4.2:2629128-2629147 | MS.gene015822:CDS | 45.0% | |
| TTTGTTGAAGATGGCCGAAG+AGG | - | chr4.2:2629431-2629450 | MS.gene015822:CDS | 45.0% | |
| ! | ACAATTGGAACATTGGCTGG+AGG | - | chr4.2:2628934-2628953 | MS.gene015822:intron | 45.0% |
| ! | ATCCCTCCTCAATTGATGAC+CGG | - | chr4.2:2627770-2627789 | MS.gene015822:intron | 45.0% |
| ! | ATTGATGACCGGTTCTTCAG+AGG | - | chr4.2:2627781-2627800 | MS.gene015822:intron | 45.0% |
| ! | CAGTGATAGCATTGGATGGA+GGG | - | chr4.2:2630379-2630398 | MS.gene015822:CDS | 45.0% |
| ! | CTTGCTGCTGCTGGTATTTT+GGG | - | chr4.2:2630303-2630322 | MS.gene015822:intron | 45.0% |
| ! | GCAATTGAGGTTTGCTTCAC+AGG | + | chr4.2:2628002-2628021 | None:intergenic | 45.0% |
| ! | GCCGAAGAGGCTGAATTTTT+CGG | - | chr4.2:2629444-2629463 | MS.gene015822:CDS | 45.0% |
| ! | TCAGTGATAGCATTGGATGG+AGG | - | chr4.2:2630378-2630397 | MS.gene015822:CDS | 45.0% |
| ! | TGCTTTCTGGCATGTACTTG+GGG | - | chr4.2:2629391-2629410 | MS.gene015822:CDS | 45.0% |
| !! | AATCTGTGAACGATGGTGGA+AGG | + | chr4.2:2629361-2629380 | None:intergenic | 45.0% |
| !! | ACGGAGAGCTTTGTTGAAGA+TGG | - | chr4.2:2629422-2629441 | MS.gene015822:CDS | 45.0% |
| !! | ACGTAGCGTGGCTATTTTGA+AGG | - | chr4.2:2626675-2626694 | MS.gene015822:CDS | 45.0% |
| !! | CATGGCCTTATGCCAAAATC+AGG | - | chr4.2:2629051-2629070 | MS.gene015822:intron | 45.0% |
| !! | ATTAATCAAATTATATTTAT+TGG | - | chr4.2:2629300-2629319 | MS.gene015822:intron | 5.0% |
| ACGCGCATGCTATTCCCAAA+TGG | - | chr4.2:2629028-2629047 | MS.gene015822:intron | 50.0% | |
| AGTTCTCTTTGTCTGCCAGG+TGG | + | chr4.2:2627960-2627979 | None:intergenic | 50.0% | |
| CCAAAATACCAGCAGCAGCA+AGG | + | chr4.2:2630305-2630324 | None:intergenic | 50.0% | |
| CCTGGCAGACAAAGAGAACT+CGG | - | chr4.2:2627960-2627979 | MS.gene015822:intron | 50.0% | |
| CTGCTGTGATTCTCGGTACT+GGG | - | chr4.2:2628983-2629002 | MS.gene015822:intron | 50.0% | |
| GAACCGGTCATCAATTGAGG+AGG | + | chr4.2:2627776-2627795 | None:intergenic | 50.0% | |
| GAAGGAACTGCTTGGAGATG+AGG | - | chr4.2:2630449-2630468 | MS.gene015822:CDS | 50.0% | |
| GATACGCTGAAGGAACTGCT+TGG | - | chr4.2:2630441-2630460 | MS.gene015822:CDS | 50.0% | |
| GGAAGAGACACAGTTAAGGG+TGG | - | chr4.2:2630342-2630361 | MS.gene015822:CDS | 50.0% | |
| GGGAGAACTAACCAAGTCCT+TGG | - | chr4.2:2628675-2628694 | MS.gene015822:intron | 50.0% | |
| GGTGGAGGATGAAAACCTTC+AGG | + | chr4.2:2627942-2627961 | None:intergenic | 50.0% | |
| TAGTGACTGACTGACCCAGT+AGG | + | chr4.2:2626838-2626857 | None:intergenic | 50.0% | |
| TGGCATAAGGCCATGCCATT+TGG | + | chr4.2:2629046-2629065 | None:intergenic | 50.0% | |
| TGGTGCATGGAAGACATGTC+AGG | + | chr4.2:2630037-2630056 | None:intergenic | 50.0% | |
| TTGCTTGGAGGATACGCTGA+AGG | - | chr4.2:2630431-2630450 | MS.gene015822:CDS | 50.0% | |
| ! | CACGCTTACCTCTGAAGAAC+CGG | + | chr4.2:2627792-2627811 | None:intergenic | 50.0% |
| ! | CCTTGCTGCTGCTGGTATTT+TGG | - | chr4.2:2630302-2630321 | MS.gene015822:intron | 50.0% |
| ! | CTTGTAGGTTGGCGAAGATG+TGG | - | chr4.2:2628651-2628670 | MS.gene015822:intron | 50.0% |
| ! | GAAGGTTTTCATCCTCCACC+TGG | - | chr4.2:2627942-2627961 | MS.gene015822:intron | 50.0% |
| ! | GCTTTCTGGCATGTACTTGG+GGG | - | chr4.2:2629392-2629411 | MS.gene015822:CDS | 50.0% |
| ! | GGCATAAGGCCATGCCATTT+GGG | + | chr4.2:2629045-2629064 | None:intergenic | 50.0% |
| ! | TAGGTTGGCGAAGATGTGGT+GGG | - | chr4.2:2628655-2628674 | MS.gene015822:intron | 50.0% |
| !! | CATGCTGGTCTTGCATCTGA+AGG | - | chr4.2:2626769-2626788 | MS.gene015822:CDS | 50.0% |
| !! | GAACGATGGTGGAAGGATCA+AGG | + | chr4.2:2629354-2629373 | None:intergenic | 50.0% |
| !! | TCAGATCTGGTGTTGTGTCG+TGG | + | chr4.2:2630057-2630076 | None:intergenic | 50.0% |
| CCGAGTTCTCTTTGTCTGCC+AGG | + | chr4.2:2627963-2627982 | None:intergenic | 55.0% | |
| GAGAAAGTGGACACGTAGCG+TGG | - | chr4.2:2626663-2626682 | MS.gene015822:CDS | 55.0% | |
| GAGCTGCAACACGCATATCC+AGG | + | chr4.2:2628711-2628730 | None:intergenic | 55.0% | |
| GAGGCAGGTCATGACTAACC+CGG | - | chr4.2:2629143-2629162 | MS.gene015822:CDS | 55.0% | |
| GCTGCTGTGATTCTCGGTAC+TGG | - | chr4.2:2628982-2629001 | MS.gene015822:intron | 55.0% | |
| TCTCTTTGTCTGCCAGGTGG+AGG | + | chr4.2:2627957-2627976 | None:intergenic | 55.0% | |
| TGTGACATTGTCGCCAGTCG+CGG | - | chr4.2:2630273-2630292 | MS.gene015822:intron | 55.0% | |
| ! | GTAGGTTGGCGAAGATGTGG+TGG | - | chr4.2:2628654-2628673 | MS.gene015822:intron | 55.0% |
| !! | GCTGGTCTTGCATCTGAAGG+TGG | - | chr4.2:2626772-2626791 | MS.gene015822:CDS | 55.0% |
| !! | TGGTGTTGTGTCGTGGTGCA+TGG | + | chr4.2:2630050-2630069 | None:intergenic | 55.0% |
| AAGAGCCGCCGCGGCACAAA+CGG | + | chr4.2:2626617-2626636 | None:intergenic | 65.0% | |
| TAAGGTCGCGGTGGGAGCTG+CGG | - | chr4.2:2626576-2626595 | MS.gene015822:CDS | 65.0% | |
| AGCAAGGCGTGCACCGCGAC+TGG | + | chr4.2:2630289-2630308 | None:intergenic | 70.0% | |
| GGTGCACGCCTTGCTGCTGC+TGG | - | chr4.2:2630294-2630313 | MS.gene015822:intron | 70.0% | |
| TTGTGCCGCGGCGGCTCTTG+TGG | - | chr4.2:2626618-2626637 | MS.gene015822:CDS | 70.0% | |
| AGCCGCCGCGGCACAAACGG+CGG | + | chr4.2:2626614-2626633 | None:intergenic | 75.0% | |
| CCGCACCACAAGAGCCGCCG+CGG | + | chr4.2:2626626-2626645 | None:intergenic | 75.0% | |
| CCGCGGCGGCTCTTGTGGTG+CGG | - | chr4.2:2626623-2626642 | MS.gene015822:CDS | 75.0% | |
| TGCCGCCGCCGTTTGTGCCG+CGG | - | chr4.2:2626606-2626625 | MS.gene015822:CDS | 75.0% | |
| ! | CGCCGCCGTTTGTGCCGCGG+CGG | - | chr4.2:2626609-2626628 | MS.gene015822:CDS | 80.0% |
| ! | CGCCGCGGCACAAACGGCGG+CGG | + | chr4.2:2626611-2626630 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 2626571 | 2630575 | 2626571 | ID=MS.gene015822 |
| chr4.2 | mRNA | 2626571 | 2630575 | 2626571 | ID=MS.gene015822.t1;Parent=MS.gene015822 |
| chr4.2 | exon | 2630304 | 2630575 | 2630304 | ID=MS.gene015822.t1.exon1;Parent=MS.gene015822.t1 |
| chr4.2 | CDS | 2630304 | 2630575 | 2630304 | ID=cds.MS.gene015822.t1;Parent=MS.gene015822.t1 |
| chr4.2 | exon | 2629344 | 2629494 | 2629344 | ID=MS.gene015822.t1.exon2;Parent=MS.gene015822.t1 |
| chr4.2 | CDS | 2629344 | 2629494 | 2629344 | ID=cds.MS.gene015822.t1;Parent=MS.gene015822.t1 |
| chr4.2 | exon | 2629076 | 2629258 | 2629076 | ID=MS.gene015822.t1.exon3;Parent=MS.gene015822.t1 |
| chr4.2 | CDS | 2629076 | 2629258 | 2629076 | ID=cds.MS.gene015822.t1;Parent=MS.gene015822.t1 |
| chr4.2 | exon | 2628414 | 2628488 | 2628414 | ID=MS.gene015822.t1.exon4;Parent=MS.gene015822.t1 |
| chr4.2 | CDS | 2628414 | 2628488 | 2628414 | ID=cds.MS.gene015822.t1;Parent=MS.gene015822.t1 |
| chr4.2 | exon | 2628066 | 2628221 | 2628066 | ID=MS.gene015822.t1.exon5;Parent=MS.gene015822.t1 |
| chr4.2 | CDS | 2628066 | 2628221 | 2628066 | ID=cds.MS.gene015822.t1;Parent=MS.gene015822.t1 |
| chr4.2 | exon | 2627856 | 2627954 | 2627856 | ID=MS.gene015822.t1.exon6;Parent=MS.gene015822.t1 |
| chr4.2 | CDS | 2627856 | 2627954 | 2627856 | ID=cds.MS.gene015822.t1;Parent=MS.gene015822.t1 |
| chr4.2 | exon | 2627638 | 2627768 | 2627638 | ID=MS.gene015822.t1.exon7;Parent=MS.gene015822.t1 |
| chr4.2 | CDS | 2627638 | 2627768 | 2627638 | ID=cds.MS.gene015822.t1;Parent=MS.gene015822.t1 |
| chr4.2 | exon | 2627035 | 2627116 | 2627035 | ID=MS.gene015822.t1.exon8;Parent=MS.gene015822.t1 |
| chr4.2 | CDS | 2627035 | 2627116 | 2627035 | ID=cds.MS.gene015822.t1;Parent=MS.gene015822.t1 |
| chr4.2 | exon | 2626571 | 2626918 | 2626571 | ID=MS.gene015822.t1.exon9;Parent=MS.gene015822.t1 |
| chr4.2 | CDS | 2626571 | 2626918 | 2626571 | ID=cds.MS.gene015822.t1;Parent=MS.gene015822.t1 |
| Gene Sequence |
| Protein sequence |
