Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21950.t1 | XP_003610965.1 | 98.6 | 496 | 7 | 0 | 1 | 496 | 1 | 496 | 1.20E-268 | 935.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21950.t1 | Q9LPS1 | 71.0 | 496 | 141 | 3 | 1 | 494 | 1 | 495 | 5.0e-191 | 668.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21950.t1 | G7K998 | 98.6 | 496 | 7 | 0 | 1 | 496 | 1 | 496 | 8.7e-269 | 935.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050359 | MS.gene21950 | 0.821479 | 3.95E-53 | -1.69E-46 |
| MS.gene050414 | MS.gene21950 | 0.803642 | 3.16E-49 | -1.69E-46 |
| MS.gene050654 | MS.gene21950 | 0.808348 | 3.24E-50 | -1.69E-46 |
| MS.gene052016 | MS.gene21950 | 0.806149 | 9.46E-50 | -1.69E-46 |
| MS.gene056097 | MS.gene21950 | 0.81289 | 3.38E-51 | -1.69E-46 |
| MS.gene056285 | MS.gene21950 | 0.833261 | 5.90E-56 | -1.69E-46 |
| MS.gene058638 | MS.gene21950 | 0.801666 | 8.08E-49 | -1.69E-46 |
| MS.gene059007 | MS.gene21950 | 0.804653 | 1.95E-49 | -1.69E-46 |
| MS.gene060563 | MS.gene21950 | 0.825035 | 5.84E-54 | -1.69E-46 |
| MS.gene060932 | MS.gene21950 | 0.802066 | 6.69E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene24159 | MS.gene21950 | PPI |
| MS.gene049065 | MS.gene21950 | PPI |
| MS.gene22288 | MS.gene21950 | PPI |
| MS.gene024702 | MS.gene21950 | PPI |
| MS.gene05986 | MS.gene21950 | PPI |
| MS.gene21680 | MS.gene21950 | PPI |
| MS.gene21950 | MS.gene64012 | PPI |
| MS.gene64215 | MS.gene21950 | PPI |
| MS.gene21950 | MS.gene015822 | PPI |
| MS.gene27072 | MS.gene21950 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21950.t1 | MTR_5g009000 | 98.589 | 496 | 7 | 0 | 1 | 496 | 1 | 496 | 0.0 | 1006 |
| MS.gene21950.t1 | MTR_8g102460 | 56.962 | 474 | 192 | 5 | 26 | 496 | 26 | 490 | 0.0 | 538 |
| MS.gene21950.t1 | MTR_8g014530 | 55.912 | 499 | 207 | 5 | 1 | 496 | 1 | 489 | 0.0 | 523 |
| MS.gene21950.t1 | MTR_6g088795 | 52.991 | 468 | 208 | 3 | 32 | 496 | 30 | 488 | 5.53e-176 | 504 |
| MS.gene21950.t1 | MTR_1g025140 | 49.582 | 478 | 223 | 6 | 26 | 496 | 24 | 490 | 4.71e-152 | 443 |
| MS.gene21950.t1 | MTR_8g102460 | 59.215 | 331 | 132 | 3 | 26 | 353 | 26 | 356 | 2.00e-137 | 401 |
| MS.gene21950.t1 | MTR_8g102460 | 55.769 | 364 | 149 | 5 | 136 | 496 | 1 | 355 | 1.69e-136 | 398 |
| MS.gene21950.t1 | MTR_1g025140 | 51.253 | 359 | 167 | 4 | 26 | 377 | 24 | 381 | 9.58e-118 | 351 |
| MS.gene21950.t1 | MTR_4g097900 | 40.441 | 272 | 114 | 3 | 222 | 492 | 3 | 227 | 1.20e-54 | 183 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene21950.t1 | AT1G50460 | 71.822 | 472 | 130 | 3 | 25 | 494 | 25 | 495 | 0.0 | 699 |
| MS.gene21950.t1 | AT3G20040 | 67.137 | 496 | 157 | 3 | 1 | 494 | 1 | 492 | 0.0 | 631 |
| MS.gene21950.t1 | AT1G50460 | 71.040 | 404 | 114 | 3 | 93 | 494 | 17 | 419 | 0.0 | 591 |
| MS.gene21950.t1 | AT4G29130 | 56.112 | 499 | 207 | 3 | 1 | 496 | 1 | 490 | 0.0 | 541 |
| MS.gene21950.t1 | AT2G19860 | 56.112 | 499 | 207 | 3 | 1 | 496 | 1 | 490 | 0.0 | 539 |
| MS.gene21950.t1 | AT1G50460 | 73.333 | 330 | 87 | 1 | 25 | 353 | 25 | 354 | 2.69e-178 | 505 |
| MS.gene21950.t1 | AT1G47840 | 49.892 | 465 | 209 | 7 | 40 | 496 | 43 | 491 | 3.33e-146 | 428 |
| MS.gene21950.t1 | AT2G19860 | 53.470 | 389 | 169 | 3 | 111 | 496 | 2 | 381 | 4.77e-139 | 406 |
| MS.gene21950.t1 | AT1G47840 | 52.201 | 318 | 146 | 4 | 40 | 353 | 43 | 358 | 1.73e-104 | 317 |
| MS.gene21950.t1 | AT4G37840 | 39.331 | 478 | 267 | 7 | 22 | 493 | 22 | 482 | 1.70e-99 | 308 |
| MS.gene21950.t1 | AT1G47845 | 46.528 | 144 | 73 | 3 | 277 | 418 | 40 | 181 | 6.84e-35 | 129 |
Find 125 sgRNAs with CRISPR-Local
Find 311 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAGCTTTAAACGAAATAT+TGG | 0.248960 | 5.1:+2938080 | MS.gene21950:CDS |
| CTAACCTGATCATTTGGATT+AGG | 0.252444 | 5.1:-2936581 | None:intergenic |
| CATATTATGCGCTGCATCTT+GGG | 0.273264 | 5.1:+2935117 | MS.gene21950:CDS |
| GAAGCTTTAAACGAAATATT+GGG | 0.286275 | 5.1:+2938081 | MS.gene21950:CDS |
| TAACCTGATCATTTGGATTA+GGG | 0.298457 | 5.1:-2936580 | None:intergenic |
| TCAATGTCATACTGTGTTCT+TGG | 0.301091 | 5.1:-2936542 | None:intergenic |
| TCATTTCAGGACTCCTTTGA+TGG | 0.304467 | 5.1:+2937659 | MS.gene21950:intron |
| CTTGCCTTCAATGGAAGATC+TGG | 0.322162 | 5.1:-2937844 | None:intergenic |
| GAAACAGACATTTGTTTCAT+AGG | 0.324581 | 5.1:-2935462 | None:intergenic |
| CCATATTATGCGCTGCATCT+TGG | 0.333001 | 5.1:+2935116 | MS.gene21950:CDS |
| CCAAGATGCAGCGCATAATA+TGG | 0.343745 | 5.1:-2935116 | None:intergenic |
| CAGGAAGCATTTGCACGAAA+TGG | 0.346216 | 5.1:+2935721 | MS.gene21950:CDS |
| GGTGGCGGCGTGTGCGGTGG+CGG | 0.355755 | 5.1:+2933660 | MS.gene21950:CDS |
| AGATGTTGCAGCATGTTTGC+AGG | 0.362698 | 5.1:+2935702 | MS.gene21950:CDS |
| CCTTCTGTCCTGTGAAGTAT+TGG | 0.373474 | 5.1:-2935415 | None:intergenic |
| CAGAACCTAACCTGATCATT+TGG | 0.382556 | 5.1:-2936587 | None:intergenic |
| GATTCCAGATCTTCCATTGA+AGG | 0.383594 | 5.1:+2937840 | MS.gene21950:intron |
| GTTGGCATCTTGAAGAAGAT+TGG | 0.393117 | 5.1:+2937934 | MS.gene21950:CDS |
| GTTGAAAGCTTCGAAGAAAT+AGG | 0.397856 | 5.1:-2936767 | None:intergenic |
| CCGAAGATGGATCAGGCATT+GGG | 0.399324 | 5.1:+2938139 | MS.gene21950:CDS |
| ACTATTGCAGCAACAGTGTC+TGG | 0.403276 | 5.1:-2936307 | None:intergenic |
| TTAGCAGCTGCTGGTATTGT+TGG | 0.409433 | 5.1:+2937916 | MS.gene21950:CDS |
| ATTCTTAATGTCACCGAAGA+TGG | 0.411432 | 5.1:+2938126 | MS.gene21950:CDS |
| TGATGCTATTATCAAGTGTC+AGG | 0.416448 | 5.1:+2936369 | MS.gene21950:CDS |
| GCATCACAGGTGGACGGAAT+AGG | 0.420274 | 5.1:+2937974 | MS.gene21950:CDS |
| TTAGGTTGTCAATATGGAAT+GGG | 0.425444 | 5.1:+2936496 | MS.gene21950:intron |
| GACGGCGACGGTGGCGGTGG+CGG | 0.428913 | 5.1:+2933645 | MS.gene21950:CDS |
| TCACTAGAGTCGGATATGTT+TGG | 0.429372 | 5.1:+2936743 | MS.gene21950:CDS |
| GGGAGTGACGGCGACGGTGG+CGG | 0.445488 | 5.1:+2933639 | MS.gene21950:CDS |
| GGCGGCGTGTGCGGTGGCGG+CGG | 0.449757 | 5.1:+2933663 | MS.gene21950:CDS |
| GACGGGAGTGGTGGCATCAC+AGG | 0.450160 | 5.1:+2937961 | MS.gene21950:CDS |
| GAAACAAATGTCTGTTTCCT+CGG | 0.450286 | 5.1:+2935467 | MS.gene21950:CDS |
| GAGTGAAGAGTAGAAGAAAG+TGG | 0.451502 | 5.1:+2933701 | MS.gene21950:CDS |
| GAAGATGGGAAGAGTGGTAG+TGG | 0.452894 | 5.1:+2933618 | None:intergenic |
| CTTGCTACTTCTATCAAGTC+AGG | 0.456183 | 5.1:-2937705 | None:intergenic |
| ACCACCTTCAGAAGCTAAAC+CGG | 0.457674 | 5.1:-2933824 | None:intergenic |
| AATCCTCAACGACACCTTTG+AGG | 0.459020 | 5.1:+2937728 | MS.gene21950:CDS |
| TTTAGGTTGTCAATATGGAA+TGG | 0.460418 | 5.1:+2936495 | MS.gene21950:intron |
| ATACGAGTGTTGAAAGGTTA+AGG | 0.464876 | 5.1:+2933767 | MS.gene21950:CDS |
| TCACAGGACAGAAGGGAACT+TGG | 0.465295 | 5.1:+2935423 | MS.gene21950:CDS |
| GGTGGCGGTGGCGGCGTGTG+CGG | 0.466342 | 5.1:+2933654 | MS.gene21950:CDS |
| AGTGACGGCGACGGTGGCGG+TGG | 0.467501 | 5.1:+2933642 | MS.gene21950:CDS |
| CCCAATGCCTGATCCATCTT+CGG | 0.469673 | 5.1:-2938139 | None:intergenic |
| GAATTCATTGCTAAAGAAGA+TGG | 0.471311 | 5.1:+2935390 | MS.gene21950:CDS |
| AAACAGACATTTGTTTCATA+GGG | 0.475582 | 5.1:-2935461 | None:intergenic |
| GGCGGTGGCGGCGTGTGCGG+TGG | 0.477522 | 5.1:+2933657 | MS.gene21950:CDS |
| ACCGAAGATGGATCAGGCAT+TGG | 0.478914 | 5.1:+2938138 | MS.gene21950:CDS |
| CTGTTGGAACATTAGCTGTT+GGG | 0.486153 | 5.1:+2936272 | MS.gene21950:CDS |
| ATCAATTCGCTCCAAGTAGC+AGG | 0.487352 | 5.1:-2936350 | None:intergenic |
| TGGTACTAATGCCTGCTACT+TGG | 0.489030 | 5.1:+2936339 | MS.gene21950:CDS |
| AAGCAGGTTAATGATACTGT+TGG | 0.489212 | 5.1:+2936256 | MS.gene21950:intron |
| AGGCAGCTACATGCACATCT+AGG | 0.489720 | 5.1:-2935744 | None:intergenic |
| AAGCCCTAATCCAAATGATC+AGG | 0.491358 | 5.1:+2936577 | MS.gene21950:CDS |
| CAGGGTCTTCTTACAACATC+AGG | 0.499400 | 5.1:+2936388 | MS.gene21950:CDS |
| TGAAGAAGATTGGTCGTGAC+GGG | 0.506742 | 5.1:+2937944 | MS.gene21950:CDS |
| AGAACAGTTGTGGCAATTGA+AGG | 0.507809 | 5.1:+2938015 | MS.gene21950:CDS |
| AATGTCACCGAAGATGGATC+AGG | 0.512205 | 5.1:+2938132 | MS.gene21950:CDS |
| ACTGTTGCTGCAATAGTCAT+TGG | 0.514702 | 5.1:+2936313 | MS.gene21950:CDS |
| GTAACGCGGGTTCATTTAAG+TGG | 0.515646 | 5.1:+2935155 | MS.gene21950:CDS |
| TCGTGAGGAGAGTCATTCTC+AGG | 0.519035 | 5.1:+2936717 | MS.gene21950:CDS |
| GCTGCTCGATTAGCAGCTGC+TGG | 0.519064 | 5.1:+2937907 | MS.gene21950:CDS |
| ATATTATGCGCTGCATCTTG+GGG | 0.519770 | 5.1:+2935118 | MS.gene21950:CDS |
| AAACAAATGTCTGTTTCCTC+GGG | 0.521874 | 5.1:+2935468 | MS.gene21950:CDS |
| AAGGCAAGTGGTTGATGCTA+TGG | 0.522670 | 5.1:+2933786 | MS.gene21950:CDS |
| AGATGTGCATGTAGCTGCCT+TGG | 0.522932 | 5.1:+2935747 | MS.gene21950:CDS |
| ATGTTGATAATCTTCCTAAC+GGG | 0.524290 | 5.1:+2933872 | MS.gene21950:CDS |
| AGACATTTGTTTCATAGGGA+AGG | 0.529304 | 5.1:-2935457 | None:intergenic |
| GTCTGACTTATTTACCTCAA+AGG | 0.532138 | 5.1:-2937742 | None:intergenic |
| CTCTACTTCATGCTCAAGGA+CGG | 0.537992 | 5.1:-2935189 | None:intergenic |
| CCAATACTTCACAGGACAGA+AGG | 0.538946 | 5.1:+2935415 | MS.gene21950:CDS |
| CTTGTGCCAGTCATTAGATG+TGG | 0.540300 | 5.1:-2935227 | None:intergenic |
| AGTGGGAGTGACGGCGACGG+TGG | 0.547039 | 5.1:+2933636 | MS.gene21950:CDS |
| GCCGGTTTAGCTTCTGAAGG+TGG | 0.550536 | 5.1:+2933823 | MS.gene21950:CDS |
| TTTCAACGCCGTTCGTACTG+AGG | 0.551274 | 5.1:+2936783 | MS.gene21950:CDS |
| TATGTTGATAATCTTCCTAA+CGG | 0.553392 | 5.1:+2933871 | MS.gene21950:CDS |
| AAGCTTTAAACGAAATATTG+GGG | 0.554190 | 5.1:+2938082 | MS.gene21950:CDS |
| AAGATTGGTCGTGACGGGAG+TGG | 0.556777 | 5.1:+2937949 | MS.gene21950:CDS |
| TCTACTTCATGCTCAAGGAC+GGG | 0.569738 | 5.1:-2935188 | None:intergenic |
| TTTGATGGCTGCCATGCATG+AGG | 0.574951 | 5.1:+2937674 | MS.gene21950:CDS |
| GTGTTGAAAGAGTTTGAAGA+AGG | 0.576656 | 5.1:+2933739 | MS.gene21950:CDS |
| TCTCAGGATGTCACTAGAGT+CGG | 0.577140 | 5.1:+2936733 | MS.gene21950:CDS |
| GTCGCTCTACTTCATGCTCA+AGG | 0.578601 | 5.1:-2935193 | None:intergenic |
| TAGGTTGTCAATATGGAATG+GGG | 0.578992 | 5.1:+2936497 | MS.gene21950:intron |
| ATGATATCAGGAATGTATCT+CGG | 0.579708 | 5.1:+2936689 | MS.gene21950:CDS |
| TCATGCATGGCAGCCATCAA+AGG | 0.579757 | 5.1:-2937672 | None:intergenic |
| TCATGCTCAAGGACGGGAGA+TGG | 0.579799 | 5.1:-2935182 | None:intergenic |
| TGTTGAAAGGTTAAGGCAAG+TGG | 0.581207 | 5.1:+2933774 | MS.gene21950:CDS |
| GCTGCAATAGTCATTGGTAC+TGG | 0.581228 | 5.1:+2936319 | MS.gene21950:CDS |
| TTGTGCCAGTCATTAGATGT+GGG | 0.585935 | 5.1:-2935226 | None:intergenic |
| AAGATGGGAAGAGTGGTAGT+GGG | 0.588287 | 5.1:+2933619 | None:intergenic |
| CACGCCGGTTTAGCTTCTGA+AGG | 0.591635 | 5.1:+2933820 | MS.gene21950:CDS |
| TTGAAGAAGATTGGTCGTGA+CGG | 0.592268 | 5.1:+2937943 | MS.gene21950:CDS |
| AGATGGTTCCAATACTTCAC+AGG | 0.592323 | 5.1:+2935407 | MS.gene21950:CDS |
| GTGACTAACCATATCTACAA+TGG | 0.594940 | 5.1:-2935520 | None:intergenic |
| GTTAGGAAGATTATCAACAT+AGG | 0.595626 | 5.1:-2933869 | None:intergenic |
| AGTGGTTGATGCTATGGCGG+TGG | 0.596296 | 5.1:+2933792 | MS.gene21950:CDS |
| ATTGGTCGTGACGGGAGTGG+TGG | 0.597920 | 5.1:+2937952 | MS.gene21950:CDS |
| GTTGTGATACGAGTGTTGAA+AGG | 0.598436 | 5.1:+2933761 | MS.gene21950:CDS |
| GGGAGTGGTGGCATCACAGG+TGG | 0.611199 | 5.1:+2937964 | MS.gene21950:CDS |
| ACAGTTGTGGCAATTGAAGG+AGG | 0.611717 | 5.1:+2938018 | MS.gene21950:CDS |
| ACTGTTGGAACATTAGCTGT+TGG | 0.612811 | 5.1:+2936271 | MS.gene21950:CDS |
| AGGTTGTCAATATGGAATGG+GGG | 0.613620 | 5.1:+2936498 | MS.gene21950:intron |
| AGGTGAATCATCCTCATGCA+TGG | 0.614958 | 5.1:-2937685 | None:intergenic |
| GTGCCAGTCATTAGATGTGG+GGG | 0.615915 | 5.1:-2935224 | None:intergenic |
| GTGGTGGCATCACAGGTGGA+CGG | 0.617417 | 5.1:+2937968 | MS.gene21950:CDS |
| TCTAATGACTGGCACAAGCA+AGG | 0.620748 | 5.1:+2935232 | MS.gene21950:CDS |
| TGTATCTCGGTGACATCGTG+AGG | 0.623745 | 5.1:+2936702 | MS.gene21950:CDS |
| ATCGGTGAAGATGGGAAGAG+TGG | 0.624776 | 5.1:+2933612 | None:intergenic |
| AAGAGTGGTAGTGGGAGTGA+CGG | 0.625333 | 5.1:+2933627 | MS.gene21950:CDS |
| CGAAGATGGATCAGGCATTG+GGG | 0.630238 | 5.1:+2938140 | MS.gene21950:CDS |
| TCTTACAACATCAGGACGCA+TGG | 0.630747 | 5.1:+2936396 | MS.gene21950:CDS |
| CAATACTTCACAGGACAGAA+GGG | 0.631867 | 5.1:+2935416 | MS.gene21950:CDS |
| GATGCTATTATCAAGTGTCA+GGG | 0.635033 | 5.1:+2936370 | MS.gene21950:CDS |
| GTGTGATGTGGTGACTCGAA+GGG | 0.640591 | 5.1:+2937885 | MS.gene21950:CDS |
| TTACCTCAAAGGTGTCGTTG+AGG | 0.644762 | 5.1:-2937731 | None:intergenic |
| ATGGCGGTGGAGATGCACGC+CGG | 0.645387 | 5.1:+2933805 | MS.gene21950:CDS |
| CCACTTGATTAAAATGCCCG+AGG | 0.646430 | 5.1:-2935484 | None:intergenic |
| TGTTGTGAAGGTGTGTGATG+TGG | 0.646930 | 5.1:+2937873 | MS.gene21950:CDS |
| GGTAGTGGGAGTGACGGCGA+CGG | 0.652117 | 5.1:+2933633 | MS.gene21950:CDS |
| TGTGTGATGTGGTGACTCGA+AGG | 0.656555 | 5.1:+2937884 | MS.gene21950:CDS |
| TATTATGCGCTGCATCTTGG+GGG | 0.666308 | 5.1:+2935119 | MS.gene21950:CDS |
| GGTACAAACCTCAGTACGAA+CGG | 0.676112 | 5.1:-2936791 | None:intergenic |
| AGCTTTAAACGAAATATTGG+GGG | 0.680619 | 5.1:+2938083 | MS.gene21950:CDS |
| GCAAGTGGTTGATGCTATGG+CGG | 0.693157 | 5.1:+2933789 | MS.gene21950:CDS |
| TGTGCCAGTCATTAGATGTG+GGG | 0.693796 | 5.1:-2935225 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTAGATATCTTAATT+TGG | + | chr5.1:2936148-2936167 | MS.gene21950:intron | 10.0% |
| !! | AGTAATATAATGAAACAAAT+AGG | - | chr5.1:2936210-2936229 | None:intergenic | 15.0% |
| !! | TAAATGATAATAGTTGTAAA+TGG | + | chr5.1:2936061-2936080 | MS.gene21950:intron | 15.0% |
| !! | TTAATTCTATAATAGTGAAA+TGG | + | chr5.1:2936034-2936053 | MS.gene21950:intron | 15.0% |
| !! | TTCAATGTCTAAAAAAATTA+AGG | - | chr5.1:2937106-2937125 | None:intergenic | 15.0% |
| !!! | AAAAGTTTTTGTATAAAAGA+AGG | - | chr5.1:2936016-2936035 | None:intergenic | 15.0% |
| !!! | AGTTCTTATTTTTCATTTTT+GGG | + | chr5.1:2936438-2936457 | MS.gene21950:intron | 15.0% |
| !!! | GTTTTTTGATTTATTATGTT+TGG | + | chr5.1:2934014-2934033 | MS.gene21950:intron | 15.0% |
| !!! | TCTTAATTGATCTTTAAAAT+TGG | + | chr5.1:2935550-2935569 | MS.gene21950:intron | 15.0% |
| !! | AAAACCATATATCTTGTATT+TGG | + | chr5.1:2937809-2937828 | MS.gene21950:intron | 20.0% |
| !! | AAACAAACCAATTTAACAAA+AGG | - | chr5.1:2935069-2935088 | None:intergenic | 20.0% |
| !! | ACTATTAACTTAGTTAATGA+AGG | - | chr5.1:2937150-2937169 | None:intergenic | 20.0% |
| !! | ATGTCTAAAAAAATTAAGGT+AGG | - | chr5.1:2937102-2937121 | None:intergenic | 20.0% |
| !! | CTATTAACTTAGTTAATGAA+GGG | - | chr5.1:2937149-2937168 | None:intergenic | 20.0% |
| !! | GAAAAACAAATCATACAATT+AGG | - | chr5.1:2935793-2935812 | None:intergenic | 20.0% |
| !! | GATGTGTATATATATTTATC+TGG | + | chr5.1:2937062-2937081 | MS.gene21950:intron | 20.0% |
| !! | TATATATTTATCTGGTGATT+TGG | + | chr5.1:2937070-2937089 | MS.gene21950:intron | 20.0% |
| !! | TGTTCTGTTATTCAATAAAA+AGG | + | chr5.1:2936882-2936901 | MS.gene21950:intron | 20.0% |
| !! | TTTAACGTTATTACATGAAA+AGG | - | chr5.1:2935318-2935337 | None:intergenic | 20.0% |
| !!! | ATGTTTTTGATCTAAATGTA+AGG | + | chr5.1:2935948-2935967 | MS.gene21950:intron | 20.0% |
| !!! | ATTTGTTATGACTAAAACTT+TGG | + | chr5.1:2936640-2936659 | MS.gene21950:intron | 20.0% |
| !!! | CAGTTCTTATTTTTCATTTT+TGG | + | chr5.1:2936437-2936456 | MS.gene21950:intron | 20.0% |
| !!! | GATTTGATTTTTGAATAATG+TGG | + | chr5.1:2934199-2934218 | MS.gene21950:intron | 20.0% |
| !!! | GTCATTTTCTCAAATTTTAT+CGG | + | chr5.1:2934598-2934617 | MS.gene21950:intron | 20.0% |
| !!! | TATATGGTTTTTAGATTTAC+AGG | - | chr5.1:2937800-2937819 | None:intergenic | 20.0% |
| !!! | TTTTTGATTTCATTTTAAGC+AGG | + | chr5.1:2936240-2936259 | MS.gene21950:intron | 20.0% |
| ! | AAAAATGAAAAGAACAGTTG+TGG | + | chr5.1:2938005-2938024 | MS.gene21950:CDS | 25.0% |
| ! | AAACAGACATTTGTTTCATA+GGG | - | chr5.1:2935464-2935483 | None:intergenic | 25.0% |
| ! | AACAAAAACATAGACAAAAC+TGG | - | chr5.1:2934074-2934093 | None:intergenic | 25.0% |
| ! | ACAAAAACATAGACAAAACT+GGG | - | chr5.1:2934073-2934092 | None:intergenic | 25.0% |
| ! | AGAAAAAAACAATCTGTTGA+AGG | - | chr5.1:2935917-2935936 | None:intergenic | 25.0% |
| ! | GGATTTGGACATTTAATAAA+TGG | + | chr5.1:2934274-2934293 | MS.gene21950:intron | 25.0% |
| ! | TATGTATTATACCTTAATCC+CGG | - | chr5.1:2935870-2935889 | None:intergenic | 25.0% |
| ! | TATTCAATAAAAAGGCAATC+TGG | + | chr5.1:2936890-2936909 | MS.gene21950:intron | 25.0% |
| ! | TGTTTATGGAAAATGTACTT+TGG | + | chr5.1:2934253-2934272 | MS.gene21950:intron | 25.0% |
| ! | TTCAATGTAATCATATGTGT+CGG | - | chr5.1:2934574-2934593 | None:intergenic | 25.0% |
| !! | AATTGACTTTGCTATAAACT+TGG | + | chr5.1:2937338-2937357 | MS.gene21950:intron | 25.0% |
| !! | ATTTTTCTTTTAGCACACAA+GGG | + | chr5.1:2937293-2937312 | MS.gene21950:intron | 25.0% |
| !! | CAAAGAAAACCAAAGTTTTA+GGG | - | chr5.1:2935272-2935291 | None:intergenic | 25.0% |
| !! | TATTTTTCTTTTAGCACACA+AGG | + | chr5.1:2937292-2937311 | MS.gene21950:intron | 25.0% |
| !! | TTCTCAAATTTTATCGGTAT+GGG | + | chr5.1:2934604-2934623 | MS.gene21950:intron | 25.0% |
| !! | TTTCTCAAATTTTATCGGTA+TGG | + | chr5.1:2934603-2934622 | MS.gene21950:intron | 25.0% |
| !! | TTTTAATCAAGTGGACAAAA+GGG | + | chr5.1:2935493-2935512 | MS.gene21950:CDS | 25.0% |
| !!! | AAGCTTTAAACGAAATATTG+GGG | + | chr5.1:2938082-2938101 | MS.gene21950:CDS | 25.0% |
| !!! | ATTTTAATCAAGTGGACAAA+AGG | + | chr5.1:2935492-2935511 | MS.gene21950:CDS | 25.0% |
| !!! | CAACAGATTGTTTTTTTCTA+GGG | + | chr5.1:2935918-2935937 | MS.gene21950:intron | 25.0% |
| !!! | CATATTTTTTGTCCCTAAAT+GGG | + | chr5.1:2937767-2937786 | MS.gene21950:intron | 25.0% |
| !!! | GAAGCTTTAAACGAAATATT+GGG | + | chr5.1:2938081-2938100 | MS.gene21950:CDS | 25.0% |
| !!! | TATGTTGATAATCTTCCTAA+CGG | + | chr5.1:2933871-2933890 | MS.gene21950:CDS | 25.0% |
| !!! | TCAACAGATTGTTTTTTTCT+AGG | + | chr5.1:2935917-2935936 | MS.gene21950:intron | 25.0% |
| !!! | TGAAGCTTTAAACGAAATAT+TGG | + | chr5.1:2938080-2938099 | MS.gene21950:CDS | 25.0% |
| !!! | TTACATGCTTTTTGAAATGT+TGG | + | chr5.1:2937406-2937425 | MS.gene21950:intron | 25.0% |
| !!! | TTTTTTATCAGTACTGAGAA+AGG | + | chr5.1:2935092-2935111 | MS.gene21950:intron | 25.0% |
| AAAAAAAGTGATTACCCGTT+AGG | - | chr5.1:2933889-2933908 | None:intergenic | 30.0% | |
| AAAAAACAATCTGTTGAAGG+CGG | - | chr5.1:2935914-2935933 | None:intergenic | 30.0% | |
| ACAGCCAAATACAAGATATA+TGG | - | chr5.1:2937816-2937835 | None:intergenic | 30.0% | |
| ACCAAATCTTGCTAAAGATA+AGG | - | chr5.1:2934983-2935002 | None:intergenic | 30.0% | |
| ACCAATTTAACAAAAGGACT+CGG | - | chr5.1:2935063-2935082 | None:intergenic | 30.0% | |
| AGTCTATGACAGCTATTTAT+TGG | + | chr5.1:2934785-2934804 | MS.gene21950:intron | 30.0% | |
| ATCAAAACAAGAAAAGCCAA+AGG | - | chr5.1:2937382-2937401 | None:intergenic | 30.0% | |
| ATCAAGCAACAAAAGTCATT+AGG | - | chr5.1:2936615-2936634 | None:intergenic | 30.0% | |
| ATCTTGGTTATACAAAGCAT+TGG | + | chr5.1:2936982-2937001 | MS.gene21950:intron | 30.0% | |
| ATGATATCAGGAATGTATCT+CGG | + | chr5.1:2936689-2936708 | MS.gene21950:CDS | 30.0% | |
| ATTGAATAACAGAACACATC+TGG | - | chr5.1:2936878-2936897 | None:intergenic | 30.0% | |
| CAAATCATACAATTAGGCTA+AGG | - | chr5.1:2935787-2935806 | None:intergenic | 30.0% | |
| CATATTGACAACCTAAAAGA+CGG | - | chr5.1:2936492-2936511 | None:intergenic | 30.0% | |
| CCATTTAGGGACAAAAAATA+TGG | - | chr5.1:2937769-2937788 | None:intergenic | 30.0% | |
| GAAACAGACATTTGTTTCAT+AGG | - | chr5.1:2935465-2935484 | None:intergenic | 30.0% | |
| GAATTCATTGCTAAAGAAGA+TGG | + | chr5.1:2935390-2935409 | MS.gene21950:CDS | 30.0% | |
| GCTGATAAGATATATTTCCT+TGG | + | chr5.1:2937563-2937582 | MS.gene21950:intron | 30.0% | |
| GGAAAACATACTTGATACTA+TGG | + | chr5.1:2936852-2936871 | MS.gene21950:intron | 30.0% | |
| GTCTATGACAGCTATTTATT+GGG | + | chr5.1:2934786-2934805 | MS.gene21950:intron | 30.0% | |
| GTGTACATAGAATAGAATAC+AGG | - | chr5.1:2937458-2937477 | None:intergenic | 30.0% | |
| GTTAGGAAGATTATCAACAT+AGG | - | chr5.1:2933872-2933891 | None:intergenic | 30.0% | |
| TAACCTGATCATTTGGATTA+GGG | - | chr5.1:2936583-2936602 | None:intergenic | 30.0% | |
| TATGTATGACCAATGTCTTT+AGG | + | chr5.1:2936831-2936850 | MS.gene21950:intron | 30.0% | |
| TATGTTTCATGCACTACAAT+TGG | - | chr5.1:2937201-2937220 | None:intergenic | 30.0% | |
| TCAAATTCAAACCAGAGATT+TGG | - | chr5.1:2937626-2937645 | None:intergenic | 30.0% | |
| TCCTTATCTTTAGCAAGATT+TGG | + | chr5.1:2934979-2934998 | MS.gene21950:intron | 30.0% | |
| TGATCAAAACCCTAAAACTT+TGG | + | chr5.1:2935260-2935279 | MS.gene21950:intron | 30.0% | |
| TGATTGATAGATTGTGTGTT+TGG | + | chr5.1:2934720-2934739 | MS.gene21950:intron | 30.0% | |
| TGGAAAATGTACTTTGGATT+TGG | + | chr5.1:2934259-2934278 | MS.gene21950:intron | 30.0% | |
| TTGATAGATTGTGTTTGGAT+TGG | + | chr5.1:2934375-2934394 | MS.gene21950:intron | 30.0% | |
| ! | AAATTGAATTTTATGCTCGC+AGG | + | chr5.1:2935335-2935354 | MS.gene21950:intron | 30.0% |
| ! | ACAATTTTTCTTGCCTTCAA+TGG | - | chr5.1:2937856-2937875 | None:intergenic | 30.0% |
| ! | ACCTATTGTTGTTCTATTGT+AGG | + | chr5.1:2936952-2936971 | MS.gene21950:intron | 30.0% |
| ! | GACTAAAACTTTGGTGATTT+GGG | + | chr5.1:2936649-2936668 | MS.gene21950:intron | 30.0% |
| ! | GCAAAGAAAACCAAAGTTTT+AGG | - | chr5.1:2935273-2935292 | None:intergenic | 30.0% |
| ! | GCTTGTTTGGTAACTATTTA+TGG | - | chr5.1:2935594-2935613 | None:intergenic | 30.0% |
| ! | GTATGTTTTCCTAAAGACAT+TGG | - | chr5.1:2936843-2936862 | None:intergenic | 30.0% |
| ! | TAATTTGCAAGCTGTAAGAA+TGG | + | chr5.1:2934352-2934371 | MS.gene21950:intron | 30.0% |
| ! | TGACTAAAACTTTGGTGATT+TGG | + | chr5.1:2936648-2936667 | MS.gene21950:intron | 30.0% |
| ! | TTAGGTTGTCAATATGGAAT+GGG | + | chr5.1:2936496-2936515 | MS.gene21950:intron | 30.0% |
| ! | TTTTTCTTTTAGCACACAAG+GGG | + | chr5.1:2937294-2937313 | MS.gene21950:intron | 30.0% |
| !! | AATGGTTGATAGATTGTGTT+TGG | + | chr5.1:2934370-2934389 | MS.gene21950:intron | 30.0% |
| !! | AATTTGGTGTGAAGGAAAAT+GGG | + | chr5.1:2936164-2936183 | MS.gene21950:intron | 30.0% |
| !! | AGCTTTAAACGAAATATTGG+GGG | + | chr5.1:2938083-2938102 | MS.gene21950:CDS | 30.0% |
| !! | ATGTTGATAATCTTCCTAAC+GGG | + | chr5.1:2933872-2933891 | MS.gene21950:CDS | 30.0% |
| !! | GAACTTATTTTCCGTCTTTT+AGG | + | chr5.1:2936478-2936497 | MS.gene21950:intron | 30.0% |
| !! | GATATCTTAATTTGGTGTGA+AGG | + | chr5.1:2936156-2936175 | MS.gene21950:intron | 30.0% |
| !! | GTTATACAAAGCATTGGAAA+AGG | + | chr5.1:2936988-2937007 | MS.gene21950:intron | 30.0% |
| !! | TAATTTGGTGTGAAGGAAAA+TGG | + | chr5.1:2936163-2936182 | MS.gene21950:intron | 30.0% |
| !! | TATTGTAGGCAGTTTTATCT+TGG | + | chr5.1:2936966-2936985 | MS.gene21950:intron | 30.0% |
| !! | TGGTTTTTAGATTTACAGGA+AGG | - | chr5.1:2937796-2937815 | None:intergenic | 30.0% |
| !! | TTTAGGTTGTCAATATGGAA+TGG | + | chr5.1:2936495-2936514 | MS.gene21950:intron | 30.0% |
| !!! | ATTGTGTTTGGATTGGTTTT+GGG | + | chr5.1:2934382-2934401 | MS.gene21950:intron | 30.0% |
| !!! | CCATATTTTTTGTCCCTAAA+TGG | + | chr5.1:2937766-2937785 | MS.gene21950:intron | 30.0% |
| !!! | GGTTTTGAGAAAATGATATC+AGG | + | chr5.1:2936677-2936696 | MS.gene21950:CDS | 30.0% |
| AAACAAATGTCTGTTTCCTC+GGG | + | chr5.1:2935468-2935487 | MS.gene21950:CDS | 35.0% | |
| AAACATAGACAAAACTGGGA+AGG | - | chr5.1:2934069-2934088 | None:intergenic | 35.0% | |
| AAACCAAGTGCAACTTGAAT+AGG | - | chr5.1:2935625-2935644 | None:intergenic | 35.0% | |
| AACCTGACAACAAATAGCTT+TGG | - | chr5.1:2935677-2935696 | None:intergenic | 35.0% | |
| AAGCAGGTTAATGATACTGT+TGG | + | chr5.1:2936256-2936275 | MS.gene21950:intron | 35.0% | |
| AAGCATCTCTTATGTGTCTA+GGG | + | chr5.1:2936920-2936939 | MS.gene21950:intron | 35.0% | |
| ACCTGACAACAAATAGCTTT+GGG | - | chr5.1:2935676-2935695 | None:intergenic | 35.0% | |
| AGACATTTGTTTCATAGGGA+AGG | - | chr5.1:2935460-2935479 | None:intergenic | 35.0% | |
| AGTAGCATATACAAATCCAC+CGG | - | chr5.1:2934933-2934952 | None:intergenic | 35.0% | |
| ATAGGACATACATGCTTGTT+TGG | - | chr5.1:2935607-2935626 | None:intergenic | 35.0% | |
| ATGACAGCTATTTATTGGGA+TGG | + | chr5.1:2934790-2934809 | MS.gene21950:intron | 35.0% | |
| ATTCTTAATGTCACCGAAGA+TGG | + | chr5.1:2938126-2938145 | MS.gene21950:CDS | 35.0% | |
| CATACAATTAGGCTAAGGAA+AGG | - | chr5.1:2935782-2935801 | None:intergenic | 35.0% | |
| CATAGTGTATGACTGAGAAT+CGG | - | chr5.1:2936815-2936834 | None:intergenic | 35.0% | |
| CTAACCTGATCATTTGGATT+AGG | - | chr5.1:2936584-2936603 | None:intergenic | 35.0% | |
| CTAATCCAAATGATCAGGTT+AGG | + | chr5.1:2936582-2936601 | MS.gene21950:intron | 35.0% | |
| CTTTCTTTCATATCCTCTTG+TGG | + | chr5.1:2937243-2937262 | MS.gene21950:intron | 35.0% | |
| GAAACAAATGTCTGTTTCCT+CGG | + | chr5.1:2935467-2935486 | MS.gene21950:CDS | 35.0% | |
| GATAGATTGTGTGTTTGGAT+TGG | + | chr5.1:2934725-2934744 | MS.gene21950:intron | 35.0% | |
| GATGCTATTATCAAGTGTCA+GGG | + | chr5.1:2936370-2936389 | MS.gene21950:CDS | 35.0% | |
| GCAATGAAAAACACCTAACA+TGG | - | chr5.1:2934168-2934187 | None:intergenic | 35.0% | |
| GCCTACAATAGAACAACAAT+AGG | - | chr5.1:2936956-2936975 | None:intergenic | 35.0% | |
| GGCAAGAAAAATTGTTGTGA+AGG | + | chr5.1:2937861-2937880 | MS.gene21950:CDS | 35.0% | |
| GTCTGACTTATTTACCTCAA+AGG | - | chr5.1:2937745-2937764 | None:intergenic | 35.0% | |
| GTGACTAACCATATCTACAA+TGG | - | chr5.1:2935523-2935542 | None:intergenic | 35.0% | |
| GTGTTGAAAGAGTTTGAAGA+AGG | + | chr5.1:2933739-2933758 | MS.gene21950:CDS | 35.0% | |
| GTTGAAAGCTTCGAAGAAAT+AGG | - | chr5.1:2936770-2936789 | None:intergenic | 35.0% | |
| GTTGTCTATTTCATGCTTTC+TGG | + | chr5.1:2934138-2934157 | MS.gene21950:intron | 35.0% | |
| TAGGTTGTCAATATGGAATG+GGG | + | chr5.1:2936497-2936516 | MS.gene21950:intron | 35.0% | |
| TCAATGTCATACTGTGTTCT+TGG | - | chr5.1:2936545-2936564 | None:intergenic | 35.0% | |
| TGACAGCTATTTATTGGGAT+GGG | + | chr5.1:2934791-2934810 | MS.gene21950:intron | 35.0% | |
| TGATGCTATTATCAAGTGTC+AGG | + | chr5.1:2936369-2936388 | MS.gene21950:CDS | 35.0% | |
| TGGAACATTGTAGTTATCCA+AGG | - | chr5.1:2937583-2937602 | None:intergenic | 35.0% | |
| TGTTCCATACTCAATTGTTC+TGG | + | chr5.1:2937596-2937615 | MS.gene21950:intron | 35.0% | |
| TTACATATGACAACTGCCTT+TGG | + | chr5.1:2937363-2937382 | MS.gene21950:intron | 35.0% | |
| TTGCCTTATACTTACACAAC+CGG | + | chr5.1:2935848-2935867 | MS.gene21950:intron | 35.0% | |
| TTGCTTTCAGAGGGAAATAT+TGG | - | chr5.1:2935825-2935844 | None:intergenic | 35.0% | |
| TTGTAGTGCATGAAACATAG+TGG | + | chr5.1:2937202-2937221 | MS.gene21950:intron | 35.0% | |
| ! | AAAGCATCTCTTATGTGTCT+AGG | + | chr5.1:2936919-2936938 | MS.gene21950:intron | 35.0% |
| ! | ACCGAGTCCTTTTGTTAAAT+TGG | + | chr5.1:2935059-2935078 | MS.gene21950:intron | 35.0% |
| ! | AGGGTTTTCCATTGTAGATA+TGG | + | chr5.1:2935512-2935531 | MS.gene21950:CDS | 35.0% |
| ! | AGGTGATTCATGATTTGTGT+CGG | + | chr5.1:2934666-2934685 | MS.gene21950:intron | 35.0% |
| ! | ATCTTGGGGGAACAAATTTT+AGG | + | chr5.1:2935132-2935151 | MS.gene21950:CDS | 35.0% |
| ! | TCTGAAACTCTTGTCATTTC+AGG | + | chr5.1:2937646-2937665 | MS.gene21950:intron | 35.0% |
| ! | TCTTGGGGGAACAAATTTTA+GGG | + | chr5.1:2935133-2935152 | MS.gene21950:CDS | 35.0% |
| !! | AAAGCTATTTGTTGTCAGGT+TGG | + | chr5.1:2935676-2935695 | MS.gene21950:intron | 35.0% |
| !! | ATACGAGTGTTGAAAGGTTA+AGG | + | chr5.1:2933767-2933786 | MS.gene21950:CDS | 35.0% |
| !! | GTTCAACAGTGTCATTTCAA+CGG | + | chr5.1:2934036-2934055 | MS.gene21950:intron | 35.0% |
| !!! | AACAAATTTTAGGGTAACGC+GGG | + | chr5.1:2935142-2935161 | MS.gene21950:CDS | 35.0% |
| !!! | ATGCACAGTTTGTTTTTTCC+TGG | + | chr5.1:2937499-2937518 | MS.gene21950:intron | 35.0% |
| !!! | CGTCTTTTAGGTTGTCAATA+TGG | + | chr5.1:2936490-2936509 | MS.gene21950:intron | 35.0% |
| !!! | GAACAAATTTTAGGGTAACG+CGG | + | chr5.1:2935141-2935160 | MS.gene21950:CDS | 35.0% |
| !!! | GATTGTGTTTGGATTGGTTT+TGG | + | chr5.1:2934381-2934400 | MS.gene21950:intron | 35.0% |
| !!! | GTTTTTTCCTGGAGTATTTG+AGG | + | chr5.1:2937510-2937529 | MS.gene21950:intron | 35.0% |
| AAGCCCTAATCCAAATGATC+AGG | + | chr5.1:2936577-2936596 | MS.gene21950:CDS | 40.0% | |
| AATGCCAACCAGTAAATAGC+TGG | - | chr5.1:2934448-2934467 | None:intergenic | 40.0% | |
| ACTAGATCTGCCAATCAAGA+AGG | + | chr5.1:2934902-2934921 | MS.gene21950:intron | 40.0% | |
| ACTGTTGCTGCAATAGTCAT+TGG | + | chr5.1:2936313-2936332 | MS.gene21950:CDS | 40.0% | |
| ACTGTTGGAACATTAGCTGT+TGG | + | chr5.1:2936271-2936290 | MS.gene21950:CDS | 40.0% | |
| AGAACAGTTGTGGCAATTGA+AGG | + | chr5.1:2938015-2938034 | MS.gene21950:CDS | 40.0% | |
| AGATGGTTCCAATACTTCAC+AGG | + | chr5.1:2935407-2935426 | MS.gene21950:CDS | 40.0% | |
| AGGAAAGGAATTCCTTACCA+AGG | - | chr5.1:2935767-2935786 | None:intergenic | 40.0% | |
| AGGTTGTCAATATGGAATGG+GGG | + | chr5.1:2936498-2936517 | MS.gene21950:intron | 40.0% | |
| AGTCTATGCCAGCTATTTAC+TGG | + | chr5.1:2934437-2934456 | MS.gene21950:intron | 40.0% | |
| ATATTATGCGCTGCATCTTG+GGG | + | chr5.1:2935118-2935137 | MS.gene21950:CDS | 40.0% | |
| ATCCCGGTTGTGTAAGTATA+AGG | - | chr5.1:2935854-2935873 | None:intergenic | 40.0% | |
| CAATAAAAAGGCAATCTGGC+AGG | + | chr5.1:2936894-2936913 | MS.gene21950:intron | 40.0% | |
| CAATACTTCACAGGACAGAA+GGG | + | chr5.1:2935416-2935435 | MS.gene21950:CDS | 40.0% | |
| CAGAACCTAACCTGATCATT+TGG | - | chr5.1:2936590-2936609 | None:intergenic | 40.0% | |
| CATATTATGCGCTGCATCTT+GGG | + | chr5.1:2935117-2935136 | MS.gene21950:CDS | 40.0% | |
| CATGAATCACCTATGAAGCA+TGG | - | chr5.1:2934658-2934677 | None:intergenic | 40.0% | |
| CTGTTGGAACATTAGCTGTT+GGG | + | chr5.1:2936272-2936291 | MS.gene21950:CDS | 40.0% | |
| CTTGCTAAAGATAAGGAGTG+CGG | - | chr5.1:2934976-2934995 | None:intergenic | 40.0% | |
| GAGTGAAGAGTAGAAGAAAG+TGG | + | chr5.1:2933701-2933720 | MS.gene21950:CDS | 40.0% | |
| GATTCCAGATCTTCCATTGA+AGG | + | chr5.1:2937840-2937859 | MS.gene21950:intron | 40.0% | |
| GTAGCATATACAAATCCACC+GGG | - | chr5.1:2934932-2934951 | None:intergenic | 40.0% | |
| GTTGGCATCTTGAAGAAGAT+TGG | + | chr5.1:2937934-2937953 | MS.gene21950:CDS | 40.0% | |
| TACTTACACAACCGGGATTA+AGG | + | chr5.1:2935856-2935875 | MS.gene21950:intron | 40.0% | |
| TATGCCAGCTATTTACTGGT+TGG | + | chr5.1:2934441-2934460 | MS.gene21950:intron | 40.0% | |
| TCACTAGAGTCGGATATGTT+TGG | + | chr5.1:2936743-2936762 | MS.gene21950:CDS | 40.0% | |
| TCATTTCAGGACTCCTTTGA+TGG | + | chr5.1:2937659-2937678 | MS.gene21950:intron | 40.0% | |
| TCTCTTATGTGTCTAGGGAA+AGG | + | chr5.1:2936925-2936944 | MS.gene21950:intron | 40.0% | |
| TGAACTGACATAGTGACACA+TGG | - | chr5.1:2934413-2934432 | None:intergenic | 40.0% | |
| TGCCTTATACTTACACAACC+GGG | + | chr5.1:2935849-2935868 | MS.gene21950:intron | 40.0% | |
| TGTTGAAAGGTTAAGGCAAG+TGG | + | chr5.1:2933774-2933793 | MS.gene21950:CDS | 40.0% | |
| TTGTGCCAGTCATTAGATGT+GGG | - | chr5.1:2935229-2935248 | None:intergenic | 40.0% | |
| ! | AGTCGTCTTATTACCACAAG+AGG | - | chr5.1:2937259-2937278 | None:intergenic | 40.0% |
| ! | ATATGGAATGGGGGAACTTT+TGG | + | chr5.1:2936507-2936526 | MS.gene21950:CDS | 40.0% |
| ! | CAGCCTATGCATCATTTTCA+CGG | - | chr5.1:2937547-2937566 | None:intergenic | 40.0% |
| ! | CTTAGTTAATGAAGGGCGTA+TGG | - | chr5.1:2937142-2937161 | None:intergenic | 40.0% |
| ! | CTTGCTACTTCTATCAAGTC+AGG | - | chr5.1:2937708-2937727 | None:intergenic | 40.0% |
| ! | TTGAAGAAGATTGGTCGTGA+CGG | + | chr5.1:2937943-2937962 | MS.gene21950:CDS | 40.0% |
| !! | ACCCAAAGCTATTTGTTGTC+AGG | + | chr5.1:2935672-2935691 | MS.gene21950:intron | 40.0% |
| !! | GTTGTGATACGAGTGTTGAA+AGG | + | chr5.1:2933761-2933780 | MS.gene21950:CDS | 40.0% |
| !! | TCACTTTTCGCAAAGCAAAC+CGG | - | chr5.1:2934510-2934529 | None:intergenic | 40.0% |
| !! | TGTCCTATTCAAGTTGCACT+TGG | + | chr5.1:2935619-2935638 | MS.gene21950:intron | 40.0% |
| !! | TGTGTGTTTGGATTGGTGTT+GGG | + | chr5.1:2934732-2934751 | MS.gene21950:intron | 40.0% |
| !! | TTGTGTGTTTGGATTGGTGT+TGG | + | chr5.1:2934731-2934750 | MS.gene21950:intron | 40.0% |
| AATCCTCAACGACACCTTTG+AGG | + | chr5.1:2937728-2937747 | MS.gene21950:CDS | 45.0% | |
| AATGTCACCGAAGATGGATC+AGG | + | chr5.1:2938132-2938151 | MS.gene21950:CDS | 45.0% | |
| ACAGGAAGGACACCCATTTA+GGG | - | chr5.1:2937782-2937801 | None:intergenic | 45.0% | |
| ACAGTTGTGGCAATTGAAGG+AGG | + | chr5.1:2938018-2938037 | MS.gene21950:CDS | 45.0% | |
| ACCACCTTCAGAAGCTAAAC+CGG | - | chr5.1:2933827-2933846 | None:intergenic | 45.0% | |
| ACTATTGCAGCAACAGTGTC+TGG | - | chr5.1:2936310-2936329 | None:intergenic | 45.0% | |
| AGATGTTGCAGCATGTTTGC+AGG | + | chr5.1:2935702-2935721 | MS.gene21950:CDS | 45.0% | |
| AGGTGAATCATCCTCATGCA+TGG | - | chr5.1:2937688-2937707 | None:intergenic | 45.0% | |
| ATCAATTCGCTCCAAGTAGC+AGG | - | chr5.1:2936353-2936372 | None:intergenic | 45.0% | |
| ATTCCCCCACATCTAATGAC+TGG | + | chr5.1:2935221-2935240 | MS.gene21950:CDS | 45.0% | |
| CAGCTAGAACCAACAATGCA+TGG | - | chr5.1:2934851-2934870 | None:intergenic | 45.0% | |
| CAGGGTCTTCTTACAACATC+AGG | + | chr5.1:2936388-2936407 | MS.gene21950:CDS | 45.0% | |
| CATGTCACCTCAAATACTCC+AGG | - | chr5.1:2937520-2937539 | None:intergenic | 45.0% | |
| CCAAGATGCAGCGCATAATA+TGG | - | chr5.1:2935119-2935138 | None:intergenic | 45.0% | |
| CCAATACTTCACAGGACAGA+AGG | + | chr5.1:2935415-2935434 | MS.gene21950:CDS | 45.0% | |
| CCACTTGATTAAAATGCCCG+AGG | - | chr5.1:2935487-2935506 | None:intergenic | 45.0% | |
| CCATATTATGCGCTGCATCT+TGG | + | chr5.1:2935116-2935135 | MS.gene21950:CDS | 45.0% | |
| CCTTCTGTCCTGTGAAGTAT+TGG | - | chr5.1:2935418-2935437 | None:intergenic | 45.0% | |
| CTCTACTTCATGCTCAAGGA+CGG | - | chr5.1:2935192-2935211 | None:intergenic | 45.0% | |
| CTTGCCTTCAATGGAAGATC+TGG | - | chr5.1:2937847-2937866 | None:intergenic | 45.0% | |
| CTTGTGCCAGTCATTAGATG+TGG | - | chr5.1:2935230-2935249 | None:intergenic | 45.0% | |
| GCTCCGTGAAAATGATGCAT+AGG | + | chr5.1:2937541-2937560 | MS.gene21950:intron | 45.0% | |
| GCTGCAATAGTCATTGGTAC+TGG | + | chr5.1:2936319-2936338 | MS.gene21950:CDS | 45.0% | |
| GGACTCGAACATTTGTTTGC+TGG | + | chr5.1:2937427-2937446 | MS.gene21950:intron | 45.0% | |
| GGTACAAACCTCAGTACGAA+CGG | - | chr5.1:2936794-2936813 | None:intergenic | 45.0% | |
| GGTTGGCATTTAACACGCTA+AGG | + | chr5.1:2934458-2934477 | MS.gene21950:intron | 45.0% | |
| GTAACGCGGGTTCATTTAAG+TGG | + | chr5.1:2935155-2935174 | MS.gene21950:CDS | 45.0% | |
| GTCATTAGATGTGGGGGAAT+AGG | - | chr5.1:2935221-2935240 | None:intergenic | 45.0% | |
| TACAGGAAGGACACCCATTT+AGG | - | chr5.1:2937783-2937802 | None:intergenic | 45.0% | |
| TATTATGCGCTGCATCTTGG+GGG | + | chr5.1:2935119-2935138 | MS.gene21950:CDS | 45.0% | |
| TCTAATGACTGGCACAAGCA+AGG | + | chr5.1:2935232-2935251 | MS.gene21950:CDS | 45.0% | |
| TCTACTTCATGCTCAAGGAC+GGG | - | chr5.1:2935191-2935210 | None:intergenic | 45.0% | |
| TCTCAGGATGTCACTAGAGT+CGG | + | chr5.1:2936733-2936752 | MS.gene21950:CDS | 45.0% | |
| TCTTACAACATCAGGACGCA+TGG | + | chr5.1:2936396-2936415 | MS.gene21950:CDS | 45.0% | |
| TGGTACTAATGCCTGCTACT+TGG | + | chr5.1:2936339-2936358 | MS.gene21950:CDS | 45.0% | |
| TGTGCCAGTCATTAGATGTG+GGG | - | chr5.1:2935228-2935247 | None:intergenic | 45.0% | |
| TTAGCAGCTGCTGGTATTGT+TGG | + | chr5.1:2937916-2937935 | MS.gene21950:CDS | 45.0% | |
| TTTGCGAAAAGTGATGCGCT+CGG | + | chr5.1:2934516-2934535 | MS.gene21950:intron | 45.0% | |
| ! | AACTTTGGTGATTTGGGTGC+AGG | + | chr5.1:2936655-2936674 | MS.gene21950:intron | 45.0% |
| ! | AAGGCAAGCATTGCTTTCAG+AGG | - | chr5.1:2935835-2935854 | None:intergenic | 45.0% |
| ! | AAGGCAAGTGGTTGATGCTA+TGG | + | chr5.1:2933786-2933805 | MS.gene21950:CDS | 45.0% |
| ! | ACTTTGGTGATTTGGGTGCA+GGG | + | chr5.1:2936656-2936675 | MS.gene21950:intron | 45.0% |
| ! | AGGCAAGCATTGCTTTCAGA+GGG | - | chr5.1:2935834-2935853 | None:intergenic | 45.0% |
| ! | TGAAGAAGATTGGTCGTGAC+GGG | + | chr5.1:2937944-2937963 | MS.gene21950:CDS | 45.0% |
| ! | TGTTGTGAAGGTGTGTGATG+TGG | + | chr5.1:2937873-2937892 | MS.gene21950:CDS | 45.0% |
| !! | CAGGAAGCATTTGCACGAAA+TGG | + | chr5.1:2935721-2935740 | MS.gene21950:CDS | 45.0% |
| !! | CCTCGGGCATTTTAATCAAG+TGG | + | chr5.1:2935484-2935503 | MS.gene21950:CDS | 45.0% |
| !! | GCTTTCTGGAGTACCATGTT+AGG | + | chr5.1:2934152-2934171 | MS.gene21950:intron | 45.0% |
| !! | TTACCTCAAAGGTGTCGTTG+AGG | - | chr5.1:2937734-2937753 | None:intergenic | 45.0% |
| !!! | GTTTGGATTGGTTTTGGGAG+AGG | + | chr5.1:2934387-2934406 | MS.gene21950:intron | 45.0% |
| !! | ATAAAAATTAGAAATTTAAA+CGG | - | chr5.1:2934104-2934123 | None:intergenic | 5.0% |
| !!! | TTTTATTTAAATTTTGTTTA+TGG | + | chr5.1:2934239-2934258 | MS.gene21950:intron | 5.0% |
| AATCAAGAAGGTTCACCCGG+TGG | + | chr5.1:2934914-2934933 | MS.gene21950:intron | 50.0% | |
| ACATAGATGTGCCTGTTGGC+CGG | + | chr5.1:2934488-2934507 | MS.gene21950:intron | 50.0% | |
| ACCGAAGATGGATCAGGCAT+TGG | + | chr5.1:2938138-2938157 | MS.gene21950:CDS | 50.0% | |
| ACCGGGTGAACCTTCTTGAT+TGG | - | chr5.1:2934915-2934934 | None:intergenic | 50.0% | |
| ACGCACATAGATGTGCCTGT+TGG | + | chr5.1:2934484-2934503 | MS.gene21950:intron | 50.0% | |
| AGATGTGCATGTAGCTGCCT+TGG | + | chr5.1:2935747-2935766 | MS.gene21950:CDS | 50.0% | |
| AGGCAGCTACATGCACATCT+AGG | - | chr5.1:2935747-2935766 | None:intergenic | 50.0% | |
| ATGAAGCATGGACTCAGACG+CGG | - | chr5.1:2934646-2934665 | None:intergenic | 50.0% | |
| CCCAATGCCTGATCCATCTT+CGG | - | chr5.1:2938142-2938161 | None:intergenic | 50.0% | |
| CCGAAGATGGATCAGGCATT+GGG | + | chr5.1:2938139-2938158 | MS.gene21950:CDS | 50.0% | |
| CGTCTGAGTCCATGCTTCAT+AGG | + | chr5.1:2934646-2934665 | MS.gene21950:intron | 50.0% | |
| GCCAATCAAGAAGGTTCACC+CGG | + | chr5.1:2934911-2934930 | MS.gene21950:intron | 50.0% | |
| GGATGGGATTTAACGCGCTA+CGG | + | chr5.1:2934807-2934826 | MS.gene21950:intron | 50.0% | |
| GTCGCTCTACTTCATGCTCA+AGG | - | chr5.1:2935196-2935215 | None:intergenic | 50.0% | |
| GTGCCAGTCATTAGATGTGG+GGG | - | chr5.1:2935227-2935246 | None:intergenic | 50.0% | |
| GTGTGATGTGGTGACTCGAA+GGG | + | chr5.1:2937885-2937904 | MS.gene21950:CDS | 50.0% | |
| TCACAGGACAGAAGGGAACT+TGG | + | chr5.1:2935423-2935442 | MS.gene21950:CDS | 50.0% | |
| TCATGCATGGCAGCCATCAA+AGG | - | chr5.1:2937675-2937694 | None:intergenic | 50.0% | |
| TCGTGAGGAGAGTCATTCTC+AGG | + | chr5.1:2936717-2936736 | MS.gene21950:CDS | 50.0% | |
| TGCATGTAGCTGCCTTGGTA+AGG | + | chr5.1:2935752-2935771 | MS.gene21950:intron | 50.0% | |
| TGTATCTCGGTGACATCGTG+AGG | + | chr5.1:2936702-2936721 | MS.gene21950:CDS | 50.0% | |
| TGTGTGATGTGGTGACTCGA+AGG | + | chr5.1:2937884-2937903 | MS.gene21950:CDS | 50.0% | |
| TTTCAACGCCGTTCGTACTG+AGG | + | chr5.1:2936783-2936802 | MS.gene21950:CDS | 50.0% | |
| ! | CGAAGATGGATCAGGCATTG+GGG | + | chr5.1:2938140-2938159 | MS.gene21950:CDS | 50.0% |
| ! | GCAAGTGGTTGATGCTATGG+CGG | + | chr5.1:2933789-2933808 | MS.gene21950:CDS | 50.0% |
| ! | TTTGATGGCTGCCATGCATG+AGG | + | chr5.1:2937674-2937693 | MS.gene21950:CDS | 50.0% |
| !! | AAGAGTGGTAGTGGGAGTGA+CGG | + | chr5.1:2933627-2933646 | MS.gene21950:CDS | 50.0% |
| ACAATGCATGGCGCGTCTGT+TGG | - | chr5.1:2934839-2934858 | None:intergenic | 55.0% | |
| ACAGACGCGCCATGCATTGT+TGG | + | chr5.1:2934839-2934858 | MS.gene21950:intron | 55.0% | |
| GCATCACAGGTGGACGGAAT+AGG | + | chr5.1:2937974-2937993 | MS.gene21950:CDS | 55.0% | |
| TCATGCTCAAGGACGGGAGA+TGG | - | chr5.1:2935185-2935204 | None:intergenic | 55.0% | |
| ! | AAGATTGGTCGTGACGGGAG+TGG | + | chr5.1:2937949-2937968 | MS.gene21950:CDS | 55.0% |
| ! | AGTGGTTGATGCTATGGCGG+TGG | + | chr5.1:2933792-2933811 | MS.gene21950:CDS | 55.0% |
| ! | GCCGGTTTAGCTTCTGAAGG+TGG | + | chr5.1:2933823-2933842 | MS.gene21950:CDS | 55.0% |
| !! | CACGCCGGTTTAGCTTCTGA+AGG | + | chr5.1:2933820-2933839 | MS.gene21950:CDS | 55.0% |
| !! | TCGGTGTCATGTCGTGTTGC+CGG | - | chr5.1:2934555-2934574 | None:intergenic | 55.0% |
| CGCAAAGCAAACCGGCCAAC+AGG | - | chr5.1:2934502-2934521 | None:intergenic | 60.0% | |
| GCTCGGATACGTGTCGTGTC+CGG | + | chr5.1:2934533-2934552 | MS.gene21950:intron | 60.0% | |
| GCTGCTCGATTAGCAGCTGC+TGG | + | chr5.1:2937907-2937926 | MS.gene21950:CDS | 60.0% | |
| GTGGTGGCATCACAGGTGGA+CGG | + | chr5.1:2937968-2937987 | MS.gene21950:CDS | 60.0% | |
| ! | ATTGGTCGTGACGGGAGTGG+TGG | + | chr5.1:2937952-2937971 | MS.gene21950:CDS | 60.0% |
| ATGGCGGTGGAGATGCACGC+CGG | + | chr5.1:2933805-2933824 | MS.gene21950:CDS | 65.0% | |
| GACGGGAGTGGTGGCATCAC+AGG | + | chr5.1:2937961-2937980 | MS.gene21950:CDS | 65.0% | |
| GGGAGTGGTGGCATCACAGG+TGG | + | chr5.1:2937964-2937983 | MS.gene21950:CDS | 65.0% | |
| !! | GGTAGTGGGAGTGACGGCGA+CGG | + | chr5.1:2933633-2933652 | MS.gene21950:CDS | 65.0% |
| AGTGGGAGTGACGGCGACGG+TGG | + | chr5.1:2933636-2933655 | MS.gene21950:CDS | 70.0% | |
| GGGAGTGACGGCGACGGTGG+CGG | + | chr5.1:2933639-2933658 | MS.gene21950:CDS | 75.0% | |
| ! | AGTGACGGCGACGGTGGCGG+TGG | + | chr5.1:2933642-2933661 | MS.gene21950:CDS | 75.0% |
| !! | GACGGCGACGGTGGCGGTGG+CGG | + | chr5.1:2933645-2933664 | MS.gene21950:CDS | 80.0% |
| !! | GGTGGCGGCGTGTGCGGTGG+CGG | + | chr5.1:2933660-2933679 | MS.gene21950:CDS | 80.0% |
| !! | GGTGGCGGTGGCGGCGTGTG+CGG | + | chr5.1:2933654-2933673 | MS.gene21950:CDS | 80.0% |
| !! | GGCGGCGTGTGCGGTGGCGG+CGG | + | chr5.1:2933663-2933682 | MS.gene21950:CDS | 85.0% |
| !! | GGCGGTGGCGGCGTGTGCGG+TGG | + | chr5.1:2933657-2933676 | MS.gene21950:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 2933622 | 2938191 | 2933622 | ID=MS.gene21950 |
| chr5.1 | mRNA | 2933622 | 2938191 | 2933622 | ID=MS.gene21950.t1;Parent=MS.gene21950 |
| chr5.1 | exon | 2933622 | 2933893 | 2933622 | ID=MS.gene21950.t1.exon1;Parent=MS.gene21950.t1 |
| chr5.1 | CDS | 2933622 | 2933893 | 2933622 | ID=cds.MS.gene21950.t1;Parent=MS.gene21950.t1 |
| chr5.1 | exon | 2935103 | 2935253 | 2935103 | ID=MS.gene21950.t1.exon2;Parent=MS.gene21950.t1 |
| chr5.1 | CDS | 2935103 | 2935253 | 2935103 | ID=cds.MS.gene21950.t1;Parent=MS.gene21950.t1 |
| chr5.1 | exon | 2935357 | 2935533 | 2935357 | ID=MS.gene21950.t1.exon3;Parent=MS.gene21950.t1 |
| chr5.1 | CDS | 2935357 | 2935533 | 2935357 | ID=cds.MS.gene21950.t1;Parent=MS.gene21950.t1 |
| chr5.1 | exon | 2935694 | 2935768 | 2935694 | ID=MS.gene21950.t1.exon4;Parent=MS.gene21950.t1 |
| chr5.1 | CDS | 2935694 | 2935768 | 2935694 | ID=cds.MS.gene21950.t1;Parent=MS.gene21950.t1 |
| chr5.1 | exon | 2936262 | 2936417 | 2936262 | ID=MS.gene21950.t1.exon5;Parent=MS.gene21950.t1 |
| chr5.1 | CDS | 2936262 | 2936417 | 2936262 | ID=cds.MS.gene21950.t1;Parent=MS.gene21950.t1 |
| chr5.1 | exon | 2936500 | 2936598 | 2936500 | ID=MS.gene21950.t1.exon6;Parent=MS.gene21950.t1 |
| chr5.1 | CDS | 2936500 | 2936598 | 2936500 | ID=cds.MS.gene21950.t1;Parent=MS.gene21950.t1 |
| chr5.1 | exon | 2936677 | 2936804 | 2936677 | ID=MS.gene21950.t1.exon7;Parent=MS.gene21950.t1 |
| chr5.1 | CDS | 2936677 | 2936804 | 2936677 | ID=cds.MS.gene21950.t1;Parent=MS.gene21950.t1 |
| chr5.1 | exon | 2937668 | 2937749 | 2937668 | ID=MS.gene21950.t1.exon8;Parent=MS.gene21950.t1 |
| chr5.1 | CDS | 2937668 | 2937749 | 2937668 | ID=cds.MS.gene21950.t1;Parent=MS.gene21950.t1 |
| chr5.1 | exon | 2937841 | 2938191 | 2937841 | ID=MS.gene21950.t1.exon9;Parent=MS.gene21950.t1 |
| chr5.1 | CDS | 2937841 | 2938191 | 2937841 | ID=cds.MS.gene21950.t1;Parent=MS.gene21950.t1 |
| Gene Sequence |
| Protein sequence |
