Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024702.t1 | XP_003610965.1 | 99 | 496 | 5 | 0 | 1 | 496 | 1 | 496 | 4.90E-270 | 939.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024702.t1 | Q9LPS1 | 71.4 | 496 | 139 | 3 | 1 | 494 | 1 | 495 | 2.1e-192 | 673.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024702.t1 | G7K998 | 99.0 | 496 | 5 | 0 | 1 | 496 | 1 | 496 | 3.5e-270 | 939.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene024702 | MS.gene049065 | PPI |
| MS.gene22288 | MS.gene024702 | PPI |
| MS.gene05986 | MS.gene024702 | PPI |
| MS.gene21680 | MS.gene024702 | PPI |
| MS.gene024702 | MS.gene21950 | PPI |
| MS.gene64215 | MS.gene024702 | PPI |
| MS.gene024702 | MS.gene21680 | PPI |
| MS.gene024702 | MS.gene015822 | PPI |
| MS.gene27072 | MS.gene024702 | PPI |
| MS.gene024702 | MS.gene05986 | PPI |
| MS.gene024702 | MS.gene64012 | PPI |
| MS.gene024702 | MS.gene24159 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024702.t1 | MTR_5g009000 | 98.992 | 496 | 5 | 0 | 1 | 496 | 1 | 496 | 0.0 | 1011 |
| MS.gene024702.t1 | MTR_8g102460 | 57.173 | 474 | 191 | 5 | 26 | 496 | 26 | 490 | 0.0 | 541 |
| MS.gene024702.t1 | MTR_8g014530 | 55.912 | 499 | 207 | 5 | 1 | 496 | 1 | 489 | 0.0 | 522 |
| MS.gene024702.t1 | MTR_6g088795 | 52.778 | 468 | 209 | 3 | 32 | 496 | 30 | 488 | 7.24e-175 | 501 |
| MS.gene024702.t1 | MTR_1g025140 | 49.582 | 478 | 223 | 6 | 26 | 496 | 24 | 490 | 1.06e-151 | 442 |
| MS.gene024702.t1 | MTR_8g102460 | 59.517 | 331 | 131 | 3 | 26 | 353 | 26 | 356 | 1.71e-138 | 404 |
| MS.gene024702.t1 | MTR_8g102460 | 55.769 | 364 | 149 | 5 | 136 | 496 | 1 | 355 | 2.10e-136 | 398 |
| MS.gene024702.t1 | MTR_1g025140 | 51.253 | 359 | 167 | 4 | 26 | 377 | 24 | 381 | 1.58e-117 | 351 |
| MS.gene024702.t1 | MTR_4g097900 | 40.441 | 272 | 114 | 3 | 222 | 492 | 3 | 227 | 1.36e-54 | 183 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024702.t1 | AT1G50460 | 72.246 | 472 | 128 | 3 | 25 | 494 | 25 | 495 | 0.0 | 703 |
| MS.gene024702.t1 | AT3G20040 | 67.339 | 496 | 156 | 3 | 1 | 494 | 1 | 492 | 0.0 | 634 |
| MS.gene024702.t1 | AT1G50460 | 71.287 | 404 | 113 | 3 | 93 | 494 | 17 | 419 | 0.0 | 592 |
| MS.gene024702.t1 | AT4G29130 | 56.112 | 499 | 207 | 3 | 1 | 496 | 1 | 490 | 0.0 | 542 |
| MS.gene024702.t1 | AT2G19860 | 56.112 | 499 | 207 | 3 | 1 | 496 | 1 | 490 | 0.0 | 539 |
| MS.gene024702.t1 | AT1G50460 | 73.636 | 330 | 86 | 1 | 25 | 353 | 25 | 354 | 1.81e-179 | 508 |
| MS.gene024702.t1 | AT1G47840 | 49.892 | 465 | 209 | 7 | 40 | 496 | 43 | 491 | 5.31e-146 | 427 |
| MS.gene024702.t1 | AT2G19860 | 53.470 | 389 | 169 | 3 | 111 | 496 | 2 | 381 | 5.20e-139 | 406 |
| MS.gene024702.t1 | AT1G47840 | 52.201 | 318 | 146 | 4 | 40 | 353 | 43 | 358 | 2.73e-104 | 317 |
| MS.gene024702.t1 | AT4G37840 | 39.331 | 478 | 267 | 7 | 22 | 493 | 22 | 482 | 1.85e-99 | 308 |
| MS.gene024702.t1 | AT1G47845 | 46.528 | 144 | 73 | 3 | 277 | 418 | 40 | 181 | 6.70e-35 | 129 |
Find 125 sgRNAs with CRISPR-Local
Find 308 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAGCTTTAAACGAAATAT+TGG | 0.248960 | 5.4:+3756246 | MS.gene024702:CDS |
| CTAACCTGATCATTTGGATT+AGG | 0.252444 | 5.4:-3754747 | None:intergenic |
| CATATTATGCGCTGCATCTT+GGG | 0.273264 | 5.4:+3753283 | MS.gene024702:CDS |
| GAAGCTTTAAACGAAATATT+GGG | 0.286275 | 5.4:+3756247 | MS.gene024702:CDS |
| TAACCTGATCATTTGGATTA+GGG | 0.298457 | 5.4:-3754746 | None:intergenic |
| TCAATGTCATACTGTGTTCT+TGG | 0.301091 | 5.4:-3754708 | None:intergenic |
| TCATTTCAGGACTCCTTTGA+TGG | 0.304467 | 5.4:+3755825 | MS.gene024702:intron |
| CTTGCCTTCAATGGAAGATC+TGG | 0.322162 | 5.4:-3756010 | None:intergenic |
| GAAACAGACATTTGTTTCAT+AGG | 0.324581 | 5.4:-3753628 | None:intergenic |
| CCATATTATGCGCTGCATCT+TGG | 0.333001 | 5.4:+3753282 | MS.gene024702:CDS |
| CCAAGATGCAGCGCATAATA+TGG | 0.343745 | 5.4:-3753282 | None:intergenic |
| CAGGAAGCATTTGCACGAAA+TGG | 0.346216 | 5.4:+3753887 | MS.gene024702:CDS |
| GGTGGCGGCGTGTGCGGTGG+CGG | 0.355755 | 5.4:+3751825 | MS.gene024702:CDS |
| AGATGTTGCAGCATGTTTGC+AGG | 0.362698 | 5.4:+3753868 | MS.gene024702:CDS |
| CCTTCTGTCCTGTGAAGTAT+TGG | 0.373474 | 5.4:-3753581 | None:intergenic |
| CAGAACCTAACCTGATCATT+TGG | 0.382556 | 5.4:-3754753 | None:intergenic |
| GATTCCAGATCTTCCATTGA+AGG | 0.383594 | 5.4:+3756006 | MS.gene024702:intron |
| GTTGGCATCTTGAAGAAGAT+TGG | 0.393117 | 5.4:+3756100 | MS.gene024702:CDS |
| GTTGAAAGCTTCGAAGAAAT+AGG | 0.397856 | 5.4:-3754933 | None:intergenic |
| CCGAAGATGGATCAGGCATT+GGG | 0.399324 | 5.4:+3756305 | MS.gene024702:CDS |
| ACTATTGCAGCAACAGTGTC+TGG | 0.403276 | 5.4:-3754473 | None:intergenic |
| TTAGCAGCTGCTGGTATTGT+TGG | 0.409433 | 5.4:+3756082 | MS.gene024702:CDS |
| ATTCTTAATGTCACCGAAGA+TGG | 0.411432 | 5.4:+3756292 | MS.gene024702:CDS |
| TGATGCTATTATCAAGTGTC+AGG | 0.416448 | 5.4:+3754535 | MS.gene024702:CDS |
| TTAGGTTGTCAATATGGAAT+GGG | 0.425444 | 5.4:+3754662 | MS.gene024702:intron |
| GACGGCGACGGTGGCGGTGG+CGG | 0.428913 | 5.4:+3751810 | MS.gene024702:CDS |
| TCACTAGAGTCGGATATGTT+TGG | 0.429372 | 5.4:+3754909 | MS.gene024702:CDS |
| GGGAGTGACGGCGACGGTGG+CGG | 0.445488 | 5.4:+3751804 | MS.gene024702:CDS |
| GGCGGCGTGTGCGGTGGCGG+CGG | 0.449757 | 5.4:+3751828 | MS.gene024702:CDS |
| GACGGGAGTGGTGGCATCAC+AGG | 0.450160 | 5.4:+3756127 | MS.gene024702:CDS |
| GAAACAAATGTCTGTTTCCT+CGG | 0.450286 | 5.4:+3753633 | MS.gene024702:CDS |
| GAGTGAAGAGTAGAAGAAAG+TGG | 0.451502 | 5.4:+3751866 | MS.gene024702:CDS |
| GAAGATGGGAAGAGTGGTAG+TGG | 0.452894 | 5.4:+3751783 | None:intergenic |
| CTTGCTACTTCTATCAAGTC+AGG | 0.456183 | 5.4:-3755871 | None:intergenic |
| ACCACCTTCAGAAGCTAAAC+CGG | 0.457674 | 5.4:-3751989 | None:intergenic |
| AATCCTCAACGACACCTTTG+AGG | 0.459020 | 5.4:+3755894 | MS.gene024702:CDS |
| TTTAGGTTGTCAATATGGAA+TGG | 0.460418 | 5.4:+3754661 | MS.gene024702:intron |
| TCACAGGACAGAAGGGAACT+TGG | 0.465295 | 5.4:+3753589 | MS.gene024702:CDS |
| GGTGGCGGTGGCGGCGTGTG+CGG | 0.466342 | 5.4:+3751819 | MS.gene024702:CDS |
| AGTGACGGCGACGGTGGCGG+TGG | 0.467501 | 5.4:+3751807 | MS.gene024702:CDS |
| CCCAATGCCTGATCCATCTT+CGG | 0.469673 | 5.4:-3756305 | None:intergenic |
| GAATTCATTGCTAAAGAAGA+TGG | 0.471311 | 5.4:+3753556 | MS.gene024702:CDS |
| AAACAGACATTTGTTTCATA+GGG | 0.475582 | 5.4:-3753627 | None:intergenic |
| GGCGGTGGCGGCGTGTGCGG+TGG | 0.477522 | 5.4:+3751822 | MS.gene024702:CDS |
| ACCGAAGATGGATCAGGCAT+TGG | 0.478914 | 5.4:+3756304 | MS.gene024702:CDS |
| ATACGAGTGTTGGAAGGTTA+AGG | 0.481037 | 5.4:+3751932 | MS.gene024702:CDS |
| CTGTTGGAACATTAGCTGTT+GGG | 0.486153 | 5.4:+3754438 | MS.gene024702:CDS |
| ATCAATTCGCTCCAAGTAGC+AGG | 0.487352 | 5.4:-3754516 | None:intergenic |
| TGGTACTAATGCCTGCTACT+TGG | 0.489030 | 5.4:+3754505 | MS.gene024702:CDS |
| AAGCAGGTTAATGATACTGT+TGG | 0.489212 | 5.4:+3754422 | MS.gene024702:intron |
| AGGCAGCTACATGCACATCT+AGG | 0.489720 | 5.4:-3753910 | None:intergenic |
| AAGCCCTAATCCAAATGATC+AGG | 0.491358 | 5.4:+3754743 | MS.gene024702:CDS |
| CAGGGTCTTCTTACAACATC+AGG | 0.499400 | 5.4:+3754554 | MS.gene024702:CDS |
| TGAAGAAGATTGGTCGTGAC+GGG | 0.506742 | 5.4:+3756110 | MS.gene024702:CDS |
| AGAACAGTTGTGGCAATTGA+AGG | 0.507809 | 5.4:+3756181 | MS.gene024702:CDS |
| AATGTCACCGAAGATGGATC+AGG | 0.512205 | 5.4:+3756298 | MS.gene024702:CDS |
| ACTGTTGCTGCAATAGTCAT+TGG | 0.514702 | 5.4:+3754479 | MS.gene024702:CDS |
| GTAACGCGGGTTCATTTAAG+TGG | 0.515646 | 5.4:+3753321 | MS.gene024702:CDS |
| TCGTGAGGAGAGTCATTCTC+AGG | 0.519035 | 5.4:+3754883 | MS.gene024702:CDS |
| ATATTATGCGCTGCATCTTG+GGG | 0.519770 | 5.4:+3753284 | MS.gene024702:CDS |
| AAACAAATGTCTGTTTCCTC+GGG | 0.521874 | 5.4:+3753634 | MS.gene024702:CDS |
| AAGGCAAGTGGTTGATGCTA+TGG | 0.522670 | 5.4:+3751951 | MS.gene024702:CDS |
| AGATGTGCATGTAGCTGCCT+TGG | 0.522932 | 5.4:+3753913 | MS.gene024702:CDS |
| ATGTTGATAATCTTCCTAAC+GGG | 0.524290 | 5.4:+3752037 | MS.gene024702:CDS |
| AGACATTTGTTTCATAGGGA+AGG | 0.529304 | 5.4:-3753623 | None:intergenic |
| GTCTGACTTATTTACCTCAA+AGG | 0.532138 | 5.4:-3755908 | None:intergenic |
| CCAATACTTCACAGGACAGA+AGG | 0.538946 | 5.4:+3753581 | MS.gene024702:CDS |
| CTTGTGCCAGTCATTAGATG+TGG | 0.540300 | 5.4:-3753393 | None:intergenic |
| GCTGCTCGATTAGCAGCTGC+TGG | 0.544833 | 5.4:+3756073 | MS.gene024702:CDS |
| AGTGGGAGTGACGGCGACGG+TGG | 0.547039 | 5.4:+3751801 | MS.gene024702:CDS |
| GCCGGTTTAGCTTCTGAAGG+TGG | 0.550536 | 5.4:+3751988 | MS.gene024702:CDS |
| TTTCAACGCCGTTCGTACTG+AGG | 0.551274 | 5.4:+3754949 | MS.gene024702:CDS |
| TATGTTGATAATCTTCCTAA+CGG | 0.553392 | 5.4:+3752036 | MS.gene024702:CDS |
| AAGCTTTAAACGAAATATTG+GGG | 0.554190 | 5.4:+3756248 | MS.gene024702:CDS |
| AAGATTGGTCGTGACGGGAG+TGG | 0.556777 | 5.4:+3756115 | MS.gene024702:CDS |
| GCATCACAGGTGGACGGAGT+AGG | 0.560009 | 5.4:+3756140 | MS.gene024702:CDS |
| TCTACTTCATGCTCAAGGAC+AGG | 0.565416 | 5.4:-3753354 | None:intergenic |
| TTTGATGGCTGCCATGCATG+AGG | 0.574951 | 5.4:+3755840 | MS.gene024702:CDS |
| GTGTTGAAAGAGTTTGAAGA+AGG | 0.576656 | 5.4:+3751904 | MS.gene024702:CDS |
| TCTCAGGATGTCACTAGAGT+CGG | 0.577140 | 5.4:+3754899 | MS.gene024702:CDS |
| TAGGTTGTCAATATGGAATG+GGG | 0.578992 | 5.4:+3754663 | MS.gene024702:intron |
| ATGATATCAGGAATGTATCT+CGG | 0.579708 | 5.4:+3754855 | MS.gene024702:CDS |
| TCATGCATGGCAGCCATCAA+AGG | 0.579757 | 5.4:-3755838 | None:intergenic |
| GCTGCAATAGTCATTGGTAC+TGG | 0.581228 | 5.4:+3754485 | MS.gene024702:CDS |
| TGTTGGAAGGTTAAGGCAAG+TGG | 0.583503 | 5.4:+3751939 | MS.gene024702:CDS |
| TTGTGCCAGTCATTAGATGT+GGG | 0.585935 | 5.4:-3753392 | None:intergenic |
| AAGATGGGAAGAGTGGTAGT+GGG | 0.588287 | 5.4:+3751784 | None:intergenic |
| GTGGTGGCATCACAGGTGGA+CGG | 0.589673 | 5.4:+3756134 | MS.gene024702:CDS |
| CACGCCGGTTTAGCTTCTGA+AGG | 0.591635 | 5.4:+3751985 | MS.gene024702:CDS |
| TTGAAGAAGATTGGTCGTGA+CGG | 0.592268 | 5.4:+3756109 | MS.gene024702:CDS |
| AGATGGTTCCAATACTTCAC+AGG | 0.592323 | 5.4:+3753573 | MS.gene024702:CDS |
| GTGACTAACCATATCTACAA+TGG | 0.594940 | 5.4:-3753686 | None:intergenic |
| GTCGCTCTACTTCATGCTCA+AGG | 0.595528 | 5.4:-3753359 | None:intergenic |
| GTTAGGAAGATTATCAACAT+AGG | 0.595626 | 5.4:-3752034 | None:intergenic |
| AGTGGTTGATGCTATGGCGG+TGG | 0.596296 | 5.4:+3751957 | MS.gene024702:CDS |
| ATTGGTCGTGACGGGAGTGG+TGG | 0.597920 | 5.4:+3756118 | MS.gene024702:CDS |
| GAAGGTTGTGATACGAGTGT+TGG | 0.604021 | 5.4:+3751922 | MS.gene024702:CDS |
| TCATGCTCAAGGACAGGAGA+TGG | 0.610436 | 5.4:-3753348 | None:intergenic |
| GTTGTGATACGAGTGTTGGA+AGG | 0.610760 | 5.4:+3751926 | MS.gene024702:CDS |
| GGGAGTGGTGGCATCACAGG+TGG | 0.611199 | 5.4:+3756130 | MS.gene024702:CDS |
| ACAGTTGTGGCAATTGAAGG+AGG | 0.611717 | 5.4:+3756184 | MS.gene024702:CDS |
| ACTGTTGGAACATTAGCTGT+TGG | 0.612811 | 5.4:+3754437 | MS.gene024702:CDS |
| AGGTTGTCAATATGGAATGG+GGG | 0.613620 | 5.4:+3754664 | MS.gene024702:intron |
| AGGTGAATCATCCTCATGCA+TGG | 0.614958 | 5.4:-3755851 | None:intergenic |
| GTGCCAGTCATTAGATGTGG+GGG | 0.615915 | 5.4:-3753390 | None:intergenic |
| GTGTGATGTGGTGACTCGTA+GGG | 0.616871 | 5.4:+3756051 | MS.gene024702:CDS |
| TCTAATGACTGGCACAAGCA+AGG | 0.620748 | 5.4:+3753398 | MS.gene024702:CDS |
| TGTATCTCGGTGACATCGTG+AGG | 0.623745 | 5.4:+3754868 | MS.gene024702:CDS |
| ATCGGTGAAGATGGGAAGAG+TGG | 0.624776 | 5.4:+3751777 | None:intergenic |
| TGTGTGATGTGGTGACTCGT+AGG | 0.625058 | 5.4:+3756050 | MS.gene024702:CDS |
| AAGAGTGGTAGTGGGAGTGA+CGG | 0.625333 | 5.4:+3751792 | MS.gene024702:CDS |
| CGAAGATGGATCAGGCATTG+GGG | 0.630238 | 5.4:+3756306 | MS.gene024702:CDS |
| TCTTACAACATCAGGACGCA+TGG | 0.630747 | 5.4:+3754562 | MS.gene024702:CDS |
| CAATACTTCACAGGACAGAA+GGG | 0.631867 | 5.4:+3753582 | MS.gene024702:CDS |
| GATGCTATTATCAAGTGTCA+GGG | 0.635033 | 5.4:+3754536 | MS.gene024702:CDS |
| TTACCTCAAAGGTGTCGTTG+AGG | 0.644762 | 5.4:-3755897 | None:intergenic |
| ATGGCGGTGGAGATGCACGC+CGG | 0.645387 | 5.4:+3751970 | MS.gene024702:CDS |
| CCACTTGATTAAAATGCCCG+AGG | 0.646430 | 5.4:-3753650 | None:intergenic |
| TGTTGTGAAGGTGTGTGATG+TGG | 0.646930 | 5.4:+3756039 | MS.gene024702:CDS |
| GGTAGTGGGAGTGACGGCGA+CGG | 0.652117 | 5.4:+3751798 | MS.gene024702:CDS |
| TATTATGCGCTGCATCTTGG+GGG | 0.666308 | 5.4:+3753285 | MS.gene024702:CDS |
| GGTACAAACCTCAGTACGAA+CGG | 0.676112 | 5.4:-3754957 | None:intergenic |
| AGCTTTAAACGAAATATTGG+GGG | 0.680619 | 5.4:+3756249 | MS.gene024702:CDS |
| GCAAGTGGTTGATGCTATGG+CGG | 0.693157 | 5.4:+3751954 | MS.gene024702:CDS |
| TGTGCCAGTCATTAGATGTG+GGG | 0.693796 | 5.4:-3753391 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTTTTAGATATCTTAATT+TGG | + | chr5.4:3754314-3754333 | MS.gene024702:intron | 10.0% |
| !! | AGTAATATAATGAAACAAAT+AGG | - | chr5.4:3754376-3754395 | None:intergenic | 15.0% |
| !! | TAAATGATAATAGTTGTAAA+TGG | + | chr5.4:3754227-3754246 | MS.gene024702:intron | 15.0% |
| !! | TTAATTCTATAATAGTGAAA+TGG | + | chr5.4:3754200-3754219 | MS.gene024702:intron | 15.0% |
| !! | TTCAATGTCTAAAAAAATTA+AGG | - | chr5.4:3755272-3755291 | None:intergenic | 15.0% |
| !!! | AGTTCTTATTTTTCATTTTT+GGG | + | chr5.4:3754604-3754623 | MS.gene024702:intron | 15.0% |
| !!! | GTTTTTTGATTTATTATGTT+TGG | + | chr5.4:3752180-3752199 | MS.gene024702:intron | 15.0% |
| !!! | TCTTAATTGATCTTTAAAAT+TGG | + | chr5.4:3753716-3753735 | MS.gene024702:intron | 15.0% |
| !! | AAAACCATATATCTTGTATT+TGG | + | chr5.4:3755975-3755994 | MS.gene024702:intron | 20.0% |
| !! | AAACAAACCAATTTAACAAA+AGG | - | chr5.4:3753235-3753254 | None:intergenic | 20.0% |
| !! | ACTATTAACTTAGTTAATGA+AGG | - | chr5.4:3755316-3755335 | None:intergenic | 20.0% |
| !! | AGAAAAAAAAAATCTGTTGA+AGG | - | chr5.4:3754083-3754102 | None:intergenic | 20.0% |
| !! | ATGTCTAAAAAAATTAAGGT+AGG | - | chr5.4:3755268-3755287 | None:intergenic | 20.0% |
| !! | CTATTAACTTAGTTAATGAA+GGG | - | chr5.4:3755315-3755334 | None:intergenic | 20.0% |
| !! | GAAAAACAAATCATACAATT+AGG | - | chr5.4:3753959-3753978 | None:intergenic | 20.0% |
| !! | GATGTGTATATATATTTATC+TGG | + | chr5.4:3755228-3755247 | MS.gene024702:intron | 20.0% |
| !! | TATATATTTATCTGGTGATT+TGG | + | chr5.4:3755236-3755255 | MS.gene024702:intron | 20.0% |
| !! | TGTTCTGTTATTCAATAAAA+AGG | + | chr5.4:3755048-3755067 | MS.gene024702:intron | 20.0% |
| !! | TTTAACGTTATTACATGAAA+AGG | - | chr5.4:3753484-3753503 | None:intergenic | 20.0% |
| !!! | AAAAGTTTTTGCATAAAAGA+AGG | - | chr5.4:3754182-3754201 | None:intergenic | 20.0% |
| !!! | ATGTTTTTGATCTAAATGTA+AGG | + | chr5.4:3754114-3754133 | MS.gene024702:intron | 20.0% |
| !!! | ATTTGTTATGACTAAAACTT+TGG | + | chr5.4:3754806-3754825 | MS.gene024702:intron | 20.0% |
| !!! | CAACAGATTTTTTTTTTCTA+GGG | + | chr5.4:3754084-3754103 | MS.gene024702:intron | 20.0% |
| !!! | CAGTTCTTATTTTTCATTTT+TGG | + | chr5.4:3754603-3754622 | MS.gene024702:intron | 20.0% |
| !!! | GTCATTTTCTCAAATTTTAT+CGG | + | chr5.4:3752764-3752783 | MS.gene024702:intron | 20.0% |
| !!! | TATATGGTTTTTAGATTTAC+AGG | - | chr5.4:3755966-3755985 | None:intergenic | 20.0% |
| !!! | TCAACAGATTTTTTTTTTCT+AGG | + | chr5.4:3754083-3754102 | MS.gene024702:intron | 20.0% |
| !!! | TTTTTGATTTCATTTTAAGC+AGG | + | chr5.4:3754406-3754425 | MS.gene024702:intron | 20.0% |
| ! | AAAAAAAAATCTGTTGAAGG+CGG | - | chr5.4:3754080-3754099 | None:intergenic | 25.0% |
| ! | AAAAATGAAAAGAACAGTTG+TGG | + | chr5.4:3756171-3756190 | MS.gene024702:CDS | 25.0% |
| ! | AAACAGACATTTGTTTCATA+GGG | - | chr5.4:3753630-3753649 | None:intergenic | 25.0% |
| ! | AACAAAAACATAGACAAAAC+TGG | - | chr5.4:3752240-3752259 | None:intergenic | 25.0% |
| ! | ACAAAAACATAGACAAAACT+GGG | - | chr5.4:3752239-3752258 | None:intergenic | 25.0% |
| ! | GGATTTGGACATTTAATAAA+TGG | + | chr5.4:3752440-3752459 | MS.gene024702:intron | 25.0% |
| ! | TATGTATTATACCTTAATCC+CGG | - | chr5.4:3754036-3754055 | None:intergenic | 25.0% |
| ! | TATTCAATAAAAAGGCAATC+TGG | + | chr5.4:3755056-3755075 | MS.gene024702:intron | 25.0% |
| ! | TGTTTATGGAAAATGTACTT+TGG | + | chr5.4:3752419-3752438 | MS.gene024702:intron | 25.0% |
| ! | TTCAATGTAATCATATGTGT+CGG | - | chr5.4:3752740-3752759 | None:intergenic | 25.0% |
| !! | CAAAGAAAACCAAAGTTTTA+GGG | - | chr5.4:3753438-3753457 | None:intergenic | 25.0% |
| !! | TTTCTCAAATTTTATCGGTA+TGG | + | chr5.4:3752769-3752788 | MS.gene024702:intron | 25.0% |
| !! | TTTTAATCAAGTGGACAAAA+GGG | + | chr5.4:3753659-3753678 | MS.gene024702:CDS | 25.0% |
| !!! | AAGCTTTAAACGAAATATTG+GGG | + | chr5.4:3756248-3756267 | MS.gene024702:CDS | 25.0% |
| !!! | ATTTTAATCAAGTGGACAAA+AGG | + | chr5.4:3753658-3753677 | MS.gene024702:CDS | 25.0% |
| !!! | CATATTTTTTGTCCCTAAAT+GGG | + | chr5.4:3755933-3755952 | MS.gene024702:intron | 25.0% |
| !!! | GAAGCTTTAAACGAAATATT+GGG | + | chr5.4:3756247-3756266 | MS.gene024702:CDS | 25.0% |
| !!! | TATGTTGATAATCTTCCTAA+CGG | + | chr5.4:3752036-3752055 | MS.gene024702:CDS | 25.0% |
| !!! | TGAAGCTTTAAACGAAATAT+TGG | + | chr5.4:3756246-3756265 | MS.gene024702:CDS | 25.0% |
| !!! | TTTTTTATCAGTACTGAGAA+AGG | + | chr5.4:3753258-3753277 | MS.gene024702:intron | 25.0% |
| AAAAAAAGTGATTACCCGTT+AGG | - | chr5.4:3752054-3752073 | None:intergenic | 30.0% | |
| ACAGCCAAATACAAGATATA+TGG | - | chr5.4:3755982-3756001 | None:intergenic | 30.0% | |
| ACCAAATCTTGCTAAAGATA+AGG | - | chr5.4:3753149-3753168 | None:intergenic | 30.0% | |
| ACCAATTTAACAAAAGGACT+CGG | - | chr5.4:3753229-3753248 | None:intergenic | 30.0% | |
| AGTCTATGACAGCTATTTAT+TGG | + | chr5.4:3752951-3752970 | MS.gene024702:intron | 30.0% | |
| ATCAAAACAAGAAAAGCCAA+AGG | - | chr5.4:3755548-3755567 | None:intergenic | 30.0% | |
| ATCAAGCAACAAAAGTCATT+AGG | - | chr5.4:3754781-3754800 | None:intergenic | 30.0% | |
| ATCTTGGTTATACAAAGCAT+TGG | + | chr5.4:3755148-3755167 | MS.gene024702:intron | 30.0% | |
| ATGATATCAGGAATGTATCT+CGG | + | chr5.4:3754855-3754874 | MS.gene024702:CDS | 30.0% | |
| ATTGAATAACAGAACACATC+TGG | - | chr5.4:3755044-3755063 | None:intergenic | 30.0% | |
| CAAATCATACAATTAGGCTA+AGG | - | chr5.4:3753953-3753972 | None:intergenic | 30.0% | |
| CATATTGACAACCTAAAAGA+CGG | - | chr5.4:3754658-3754677 | None:intergenic | 30.0% | |
| CCATTTAGGGACAAAAAATA+TGG | - | chr5.4:3755935-3755954 | None:intergenic | 30.0% | |
| GAAACAGACATTTGTTTCAT+AGG | - | chr5.4:3753631-3753650 | None:intergenic | 30.0% | |
| GAATTCATTGCTAAAGAAGA+TGG | + | chr5.4:3753556-3753575 | MS.gene024702:CDS | 30.0% | |
| GCTGATAAGATATATTTCCT+TGG | + | chr5.4:3755729-3755748 | MS.gene024702:intron | 30.0% | |
| GGAAAACATACTTGATACTA+TGG | + | chr5.4:3755018-3755037 | MS.gene024702:intron | 30.0% | |
| GTCTATGACAGCTATTTATT+GGG | + | chr5.4:3752952-3752971 | MS.gene024702:intron | 30.0% | |
| GTGTACATAGAATAGAATAC+AGG | - | chr5.4:3755624-3755643 | None:intergenic | 30.0% | |
| GTTAGGAAGATTATCAACAT+AGG | - | chr5.4:3752037-3752056 | None:intergenic | 30.0% | |
| TAACCTGATCATTTGGATTA+GGG | - | chr5.4:3754749-3754768 | None:intergenic | 30.0% | |
| TATGTATGACCAATGTCTTT+AGG | + | chr5.4:3754997-3755016 | MS.gene024702:intron | 30.0% | |
| TATGTTTCATGCACTACAAT+TGG | - | chr5.4:3755367-3755386 | None:intergenic | 30.0% | |
| TCAAATTCAAACCAGAGATT+TGG | - | chr5.4:3755792-3755811 | None:intergenic | 30.0% | |
| TCCTTATCTTTAGCAAGATT+TGG | + | chr5.4:3753145-3753164 | MS.gene024702:intron | 30.0% | |
| TGATCAAAACCCTAAAACTT+TGG | + | chr5.4:3753426-3753445 | MS.gene024702:intron | 30.0% | |
| TGATTGATAGATTGTGTGTT+TGG | + | chr5.4:3752886-3752905 | MS.gene024702:intron | 30.0% | |
| TGGAAAATGTACTTTGGATT+TGG | + | chr5.4:3752425-3752444 | MS.gene024702:intron | 30.0% | |
| TTGATAGATTGTGTTTGGAT+TGG | + | chr5.4:3752541-3752560 | MS.gene024702:intron | 30.0% | |
| ! | AAATTGAATTTTATGCTCGC+AGG | + | chr5.4:3753501-3753520 | MS.gene024702:intron | 30.0% |
| ! | ACAATTTTTCTTGCCTTCAA+TGG | - | chr5.4:3756022-3756041 | None:intergenic | 30.0% |
| ! | ACCTATTGTTGTTCTATTGT+AGG | + | chr5.4:3755118-3755137 | MS.gene024702:intron | 30.0% |
| ! | AGTTGACTTTGCTATAAACT+TGG | + | chr5.4:3755504-3755523 | MS.gene024702:intron | 30.0% |
| ! | ATTTTTCTTTTGAGCACACA+AGG | + | chr5.4:3755458-3755477 | MS.gene024702:intron | 30.0% |
| ! | GACTAAAACTTTGGTGATTT+GGG | + | chr5.4:3754815-3754834 | MS.gene024702:intron | 30.0% |
| ! | GCAAAGAAAACCAAAGTTTT+AGG | - | chr5.4:3753439-3753458 | None:intergenic | 30.0% |
| ! | GCTTGTTTGGTAACTATTTA+TGG | - | chr5.4:3753760-3753779 | None:intergenic | 30.0% |
| ! | GTATGTTTTCCTAAAGACAT+TGG | - | chr5.4:3755009-3755028 | None:intergenic | 30.0% |
| ! | TAATTTGCAAGCTGTAAGAA+TGG | + | chr5.4:3752518-3752537 | MS.gene024702:intron | 30.0% |
| ! | TGACTAAAACTTTGGTGATT+TGG | + | chr5.4:3754814-3754833 | MS.gene024702:intron | 30.0% |
| ! | TTAGGTTGTCAATATGGAAT+GGG | + | chr5.4:3754662-3754681 | MS.gene024702:intron | 30.0% |
| ! | TTTTTCTTTTGAGCACACAA+GGG | + | chr5.4:3755459-3755478 | MS.gene024702:intron | 30.0% |
| !! | AATGGTTGATAGATTGTGTT+TGG | + | chr5.4:3752536-3752555 | MS.gene024702:intron | 30.0% |
| !! | AATTTGGTGTGAAGGAAAAT+GGG | + | chr5.4:3754330-3754349 | MS.gene024702:intron | 30.0% |
| !! | AGCTTTAAACGAAATATTGG+GGG | + | chr5.4:3756249-3756268 | MS.gene024702:CDS | 30.0% |
| !! | ATGTTGATAATCTTCCTAAC+GGG | + | chr5.4:3752037-3752056 | MS.gene024702:CDS | 30.0% |
| !! | GAACTTATTTTCCGTCTTTT+AGG | + | chr5.4:3754644-3754663 | MS.gene024702:intron | 30.0% |
| !! | GATATCTTAATTTGGTGTGA+AGG | + | chr5.4:3754322-3754341 | MS.gene024702:intron | 30.0% |
| !! | GTTATACAAAGCATTGGAAA+AGG | + | chr5.4:3755154-3755173 | MS.gene024702:intron | 30.0% |
| !! | TAATTTGGTGTGAAGGAAAA+TGG | + | chr5.4:3754329-3754348 | MS.gene024702:intron | 30.0% |
| !! | TATTGTAGGCAGTTTTATCT+TGG | + | chr5.4:3755132-3755151 | MS.gene024702:intron | 30.0% |
| !! | TGGTTTTTAGATTTACAGGA+AGG | - | chr5.4:3755962-3755981 | None:intergenic | 30.0% |
| !! | TTTAGGTTGTCAATATGGAA+TGG | + | chr5.4:3754661-3754680 | MS.gene024702:intron | 30.0% |
| !!! | ATTGTGTTTGGATTGGTTTT+GGG | + | chr5.4:3752548-3752567 | MS.gene024702:intron | 30.0% |
| !!! | CCATATTTTTTGTCCCTAAA+TGG | + | chr5.4:3755932-3755951 | MS.gene024702:intron | 30.0% |
| !!! | GGTTTTGAGAAAATGATATC+AGG | + | chr5.4:3754843-3754862 | MS.gene024702:CDS | 30.0% |
| AAACAAATGTCTGTTTCCTC+GGG | + | chr5.4:3753634-3753653 | MS.gene024702:CDS | 35.0% | |
| AAACATAGACAAAACTGGGA+AGG | - | chr5.4:3752235-3752254 | None:intergenic | 35.0% | |
| AAACCAAGTGCAACTTGAAT+AGG | - | chr5.4:3753791-3753810 | None:intergenic | 35.0% | |
| AACCTGACAACAAATAGCTT+TGG | - | chr5.4:3753843-3753862 | None:intergenic | 35.0% | |
| AAGCAGGTTAATGATACTGT+TGG | + | chr5.4:3754422-3754441 | MS.gene024702:intron | 35.0% | |
| AAGCATCTCTTATGTGTCTA+GGG | + | chr5.4:3755086-3755105 | MS.gene024702:intron | 35.0% | |
| ACCTGACAACAAATAGCTTT+GGG | - | chr5.4:3753842-3753861 | None:intergenic | 35.0% | |
| AGACATTTGTTTCATAGGGA+AGG | - | chr5.4:3753626-3753645 | None:intergenic | 35.0% | |
| AGTAGCATATACAAATCCAC+CGG | - | chr5.4:3753099-3753118 | None:intergenic | 35.0% | |
| ATAGGACATACATGCTTGTT+TGG | - | chr5.4:3753773-3753792 | None:intergenic | 35.0% | |
| ATGACAGCTATTTATTGGGA+TGG | + | chr5.4:3752956-3752975 | MS.gene024702:intron | 35.0% | |
| ATTCTTAATGTCACCGAAGA+TGG | + | chr5.4:3756292-3756311 | MS.gene024702:CDS | 35.0% | |
| CATACAATTAGGCTAAGGAA+AGG | - | chr5.4:3753948-3753967 | None:intergenic | 35.0% | |
| CATAGTGTATGACTGAGAAT+CGG | - | chr5.4:3754981-3755000 | None:intergenic | 35.0% | |
| CTAACCTGATCATTTGGATT+AGG | - | chr5.4:3754750-3754769 | None:intergenic | 35.0% | |
| CTAATCCAAATGATCAGGTT+AGG | + | chr5.4:3754748-3754767 | MS.gene024702:intron | 35.0% | |
| CTTTCTTTCATATCCTCTTG+TGG | + | chr5.4:3755408-3755427 | MS.gene024702:intron | 35.0% | |
| GAAACAAATGTCTGTTTCCT+CGG | + | chr5.4:3753633-3753652 | MS.gene024702:CDS | 35.0% | |
| GATAGATTGTGTGTTTGGAT+TGG | + | chr5.4:3752891-3752910 | MS.gene024702:intron | 35.0% | |
| GATGCTATTATCAAGTGTCA+GGG | + | chr5.4:3754536-3754555 | MS.gene024702:CDS | 35.0% | |
| GCAATGAAAAACACCTAACA+TGG | - | chr5.4:3752334-3752353 | None:intergenic | 35.0% | |
| GCCTACAATAGAACAACAAT+AGG | - | chr5.4:3755122-3755141 | None:intergenic | 35.0% | |
| GGCAAGAAAAATTGTTGTGA+AGG | + | chr5.4:3756027-3756046 | MS.gene024702:CDS | 35.0% | |
| GTCTGACTTATTTACCTCAA+AGG | - | chr5.4:3755911-3755930 | None:intergenic | 35.0% | |
| GTGACTAACCATATCTACAA+TGG | - | chr5.4:3753689-3753708 | None:intergenic | 35.0% | |
| GTGTTGAAAGAGTTTGAAGA+AGG | + | chr5.4:3751904-3751923 | MS.gene024702:CDS | 35.0% | |
| GTTGAAAGCTTCGAAGAAAT+AGG | - | chr5.4:3754936-3754955 | None:intergenic | 35.0% | |
| GTTGTCTATTTCATGCTTTC+TGG | + | chr5.4:3752304-3752323 | MS.gene024702:intron | 35.0% | |
| TAGGTTGTCAATATGGAATG+GGG | + | chr5.4:3754663-3754682 | MS.gene024702:intron | 35.0% | |
| TCAATGTCATACTGTGTTCT+TGG | - | chr5.4:3754711-3754730 | None:intergenic | 35.0% | |
| TGACAGCTATTTATTGGGAT+GGG | + | chr5.4:3752957-3752976 | MS.gene024702:intron | 35.0% | |
| TGATGCTATTATCAAGTGTC+AGG | + | chr5.4:3754535-3754554 | MS.gene024702:CDS | 35.0% | |
| TGGAACATTGTAGTTATCCA+AGG | - | chr5.4:3755749-3755768 | None:intergenic | 35.0% | |
| TGTTCCATACTCAATTGTTC+TGG | + | chr5.4:3755762-3755781 | MS.gene024702:intron | 35.0% | |
| TTACATATGACAACTGCCTT+TGG | + | chr5.4:3755529-3755548 | MS.gene024702:intron | 35.0% | |
| TTGCCTTATACTTACACAAC+CGG | + | chr5.4:3754014-3754033 | MS.gene024702:intron | 35.0% | |
| TTGCTTTCAGAGGGAAATAT+TGG | - | chr5.4:3753991-3754010 | None:intergenic | 35.0% | |
| TTGTAGTGCATGAAACATAG+TGG | + | chr5.4:3755368-3755387 | MS.gene024702:intron | 35.0% | |
| ! | AAAGCATCTCTTATGTGTCT+AGG | + | chr5.4:3755085-3755104 | MS.gene024702:intron | 35.0% |
| ! | ACCGAGTCCTTTTGTTAAAT+TGG | + | chr5.4:3753225-3753244 | MS.gene024702:intron | 35.0% |
| ! | AGGGTTTTCCATTGTAGATA+TGG | + | chr5.4:3753678-3753697 | MS.gene024702:CDS | 35.0% |
| ! | AGGTGATTCATGATTTGTGT+CGG | + | chr5.4:3752832-3752851 | MS.gene024702:intron | 35.0% |
| ! | ATCTTGGGGGAACAAATTTT+AGG | + | chr5.4:3753298-3753317 | MS.gene024702:CDS | 35.0% |
| ! | TCTGAAACTCTTGTCATTTC+AGG | + | chr5.4:3755812-3755831 | MS.gene024702:intron | 35.0% |
| ! | TCTTGGGGGAACAAATTTTA+GGG | + | chr5.4:3753299-3753318 | MS.gene024702:CDS | 35.0% |
| ! | TTTTCTTTTGAGCACACAAG+GGG | + | chr5.4:3755460-3755479 | MS.gene024702:intron | 35.0% |
| !! | AAAGCTATTTGTTGTCAGGT+TGG | + | chr5.4:3753842-3753861 | MS.gene024702:intron | 35.0% |
| !! | GTTCAACAGTGTCATTTCAA+CGG | + | chr5.4:3752202-3752221 | MS.gene024702:intron | 35.0% |
| !!! | AACAAATTTTAGGGTAACGC+GGG | + | chr5.4:3753308-3753327 | MS.gene024702:CDS | 35.0% |
| !!! | ATGCACAGTTTGTTTTTTCC+TGG | + | chr5.4:3755665-3755684 | MS.gene024702:intron | 35.0% |
| !!! | CGTCTTTTAGGTTGTCAATA+TGG | + | chr5.4:3754656-3754675 | MS.gene024702:intron | 35.0% |
| !!! | GAACAAATTTTAGGGTAACG+CGG | + | chr5.4:3753307-3753326 | MS.gene024702:CDS | 35.0% |
| !!! | GATTGTGTTTGGATTGGTTT+TGG | + | chr5.4:3752547-3752566 | MS.gene024702:intron | 35.0% |
| !!! | GTTTTTTCCTGGAGTATTTG+AGG | + | chr5.4:3755676-3755695 | MS.gene024702:intron | 35.0% |
| AAGCCCTAATCCAAATGATC+AGG | + | chr5.4:3754743-3754762 | MS.gene024702:CDS | 40.0% | |
| AATGCCAACCAGTAAATAGC+TGG | - | chr5.4:3752614-3752633 | None:intergenic | 40.0% | |
| ACTAGATCTGCCAATCAAGA+AGG | + | chr5.4:3753068-3753087 | MS.gene024702:intron | 40.0% | |
| ACTGTTGCTGCAATAGTCAT+TGG | + | chr5.4:3754479-3754498 | MS.gene024702:CDS | 40.0% | |
| ACTGTTGGAACATTAGCTGT+TGG | + | chr5.4:3754437-3754456 | MS.gene024702:CDS | 40.0% | |
| AGAACAGTTGTGGCAATTGA+AGG | + | chr5.4:3756181-3756200 | MS.gene024702:CDS | 40.0% | |
| AGATGGTTCCAATACTTCAC+AGG | + | chr5.4:3753573-3753592 | MS.gene024702:CDS | 40.0% | |
| AGGAAAGGAATTCCTTACCA+AGG | - | chr5.4:3753933-3753952 | None:intergenic | 40.0% | |
| AGGTTGTCAATATGGAATGG+GGG | + | chr5.4:3754664-3754683 | MS.gene024702:intron | 40.0% | |
| AGTCTATGCCAGCTATTTAC+TGG | + | chr5.4:3752603-3752622 | MS.gene024702:intron | 40.0% | |
| ATATTATGCGCTGCATCTTG+GGG | + | chr5.4:3753284-3753303 | MS.gene024702:CDS | 40.0% | |
| ATCCCGGTTGTGTAAGTATA+AGG | - | chr5.4:3754020-3754039 | None:intergenic | 40.0% | |
| CAATAAAAAGGCAATCTGGC+AGG | + | chr5.4:3755060-3755079 | MS.gene024702:intron | 40.0% | |
| CAATACTTCACAGGACAGAA+GGG | + | chr5.4:3753582-3753601 | MS.gene024702:CDS | 40.0% | |
| CAGAACCTAACCTGATCATT+TGG | - | chr5.4:3754756-3754775 | None:intergenic | 40.0% | |
| CATATTATGCGCTGCATCTT+GGG | + | chr5.4:3753283-3753302 | MS.gene024702:CDS | 40.0% | |
| CATGAATCACCTATGAAGCA+TGG | - | chr5.4:3752824-3752843 | None:intergenic | 40.0% | |
| CTGTTGGAACATTAGCTGTT+GGG | + | chr5.4:3754438-3754457 | MS.gene024702:CDS | 40.0% | |
| CTTGCTAAAGATAAGGAGTG+CGG | - | chr5.4:3753142-3753161 | None:intergenic | 40.0% | |
| GAGTGAAGAGTAGAAGAAAG+TGG | + | chr5.4:3751866-3751885 | MS.gene024702:CDS | 40.0% | |
| GATTCCAGATCTTCCATTGA+AGG | + | chr5.4:3756006-3756025 | MS.gene024702:intron | 40.0% | |
| GTAGCATATACAAATCCACC+GGG | - | chr5.4:3753098-3753117 | None:intergenic | 40.0% | |
| GTTGGCATCTTGAAGAAGAT+TGG | + | chr5.4:3756100-3756119 | MS.gene024702:CDS | 40.0% | |
| TACTTACACAACCGGGATTA+AGG | + | chr5.4:3754022-3754041 | MS.gene024702:intron | 40.0% | |
| TATGCCAGCTATTTACTGGT+TGG | + | chr5.4:3752607-3752626 | MS.gene024702:intron | 40.0% | |
| TCACTAGAGTCGGATATGTT+TGG | + | chr5.4:3754909-3754928 | MS.gene024702:CDS | 40.0% | |
| TCATTTCAGGACTCCTTTGA+TGG | + | chr5.4:3755825-3755844 | MS.gene024702:intron | 40.0% | |
| TCTCTTATGTGTCTAGGGAA+AGG | + | chr5.4:3755091-3755110 | MS.gene024702:intron | 40.0% | |
| TGAACTGACATAGTGACACA+TGG | - | chr5.4:3752579-3752598 | None:intergenic | 40.0% | |
| TGCCTTATACTTACACAACC+GGG | + | chr5.4:3754015-3754034 | MS.gene024702:intron | 40.0% | |
| TTGTGCCAGTCATTAGATGT+GGG | - | chr5.4:3753395-3753414 | None:intergenic | 40.0% | |
| ! | AGTCGTCTTATTACCACAAG+AGG | - | chr5.4:3755424-3755443 | None:intergenic | 40.0% |
| ! | ATATGGAATGGGGGAACTTT+TGG | + | chr5.4:3754673-3754692 | MS.gene024702:CDS | 40.0% |
| ! | CAGCCTATGCATCATTTTCA+CGG | - | chr5.4:3755713-3755732 | None:intergenic | 40.0% |
| ! | CTTAGTTAATGAAGGGCGTA+TGG | - | chr5.4:3755308-3755327 | None:intergenic | 40.0% |
| ! | CTTGCTACTTCTATCAAGTC+AGG | - | chr5.4:3755874-3755893 | None:intergenic | 40.0% |
| ! | TTGAAGAAGATTGGTCGTGA+CGG | + | chr5.4:3756109-3756128 | MS.gene024702:CDS | 40.0% |
| !! | ACCCAAAGCTATTTGTTGTC+AGG | + | chr5.4:3753838-3753857 | MS.gene024702:intron | 40.0% |
| !! | ATACGAGTGTTGGAAGGTTA+AGG | + | chr5.4:3751932-3751951 | MS.gene024702:CDS | 40.0% |
| !! | TCACTTTTCGCAAAGCAAAC+CGG | - | chr5.4:3752676-3752695 | None:intergenic | 40.0% |
| !! | TGTCCTATTCAAGTTGCACT+TGG | + | chr5.4:3753785-3753804 | MS.gene024702:intron | 40.0% |
| !! | TGTGTGTTTGGATTGGTGTT+GGG | + | chr5.4:3752898-3752917 | MS.gene024702:intron | 40.0% |
| !! | TTGTGTGTTTGGATTGGTGT+TGG | + | chr5.4:3752897-3752916 | MS.gene024702:intron | 40.0% |
| AATCCTCAACGACACCTTTG+AGG | + | chr5.4:3755894-3755913 | MS.gene024702:CDS | 45.0% | |
| AATGTCACCGAAGATGGATC+AGG | + | chr5.4:3756298-3756317 | MS.gene024702:CDS | 45.0% | |
| ACAGGAAGGACACCCATTTA+GGG | - | chr5.4:3755948-3755967 | None:intergenic | 45.0% | |
| ACAGTTGTGGCAATTGAAGG+AGG | + | chr5.4:3756184-3756203 | MS.gene024702:CDS | 45.0% | |
| ACCACCTTCAGAAGCTAAAC+CGG | - | chr5.4:3751992-3752011 | None:intergenic | 45.0% | |
| ACTATTGCAGCAACAGTGTC+TGG | - | chr5.4:3754476-3754495 | None:intergenic | 45.0% | |
| AGATGTTGCAGCATGTTTGC+AGG | + | chr5.4:3753868-3753887 | MS.gene024702:CDS | 45.0% | |
| AGGTGAATCATCCTCATGCA+TGG | - | chr5.4:3755854-3755873 | None:intergenic | 45.0% | |
| ATCAATTCGCTCCAAGTAGC+AGG | - | chr5.4:3754519-3754538 | None:intergenic | 45.0% | |
| ATGAAGCATGGACTCAGACA+CGG | - | chr5.4:3752812-3752831 | None:intergenic | 45.0% | |
| ATTCCCCCACATCTAATGAC+TGG | + | chr5.4:3753387-3753406 | MS.gene024702:CDS | 45.0% | |
| CAGCTAGAACCAACAATGCA+TGG | - | chr5.4:3753017-3753036 | None:intergenic | 45.0% | |
| CAGGGTCTTCTTACAACATC+AGG | + | chr5.4:3754554-3754573 | MS.gene024702:CDS | 45.0% | |
| CATGTCACCTCAAATACTCC+AGG | - | chr5.4:3755686-3755705 | None:intergenic | 45.0% | |
| CCAAGATGCAGCGCATAATA+TGG | - | chr5.4:3753285-3753304 | None:intergenic | 45.0% | |
| CCAATACTTCACAGGACAGA+AGG | + | chr5.4:3753581-3753600 | MS.gene024702:CDS | 45.0% | |
| CCACTTGATTAAAATGCCCG+AGG | - | chr5.4:3753653-3753672 | None:intergenic | 45.0% | |
| CCATATTATGCGCTGCATCT+TGG | + | chr5.4:3753282-3753301 | MS.gene024702:CDS | 45.0% | |
| CCTTCTGTCCTGTGAAGTAT+TGG | - | chr5.4:3753584-3753603 | None:intergenic | 45.0% | |
| CTTGCCTTCAATGGAAGATC+TGG | - | chr5.4:3756013-3756032 | None:intergenic | 45.0% | |
| CTTGTGCCAGTCATTAGATG+TGG | - | chr5.4:3753396-3753415 | None:intergenic | 45.0% | |
| GAAGGTTGTGATACGAGTGT+TGG | + | chr5.4:3751922-3751941 | MS.gene024702:CDS | 45.0% | |
| GCACTCGAACATTTGTTTGC+TGG | + | chr5.4:3755593-3755612 | MS.gene024702:intron | 45.0% | |
| GCTCCGTGAAAATGATGCAT+AGG | + | chr5.4:3755707-3755726 | MS.gene024702:intron | 45.0% | |
| GCTGCAATAGTCATTGGTAC+TGG | + | chr5.4:3754485-3754504 | MS.gene024702:CDS | 45.0% | |
| GGTACAAACCTCAGTACGAA+CGG | - | chr5.4:3754960-3754979 | None:intergenic | 45.0% | |
| GGTTGGCATTTAACACGCTA+AGG | + | chr5.4:3752624-3752643 | MS.gene024702:intron | 45.0% | |
| GTAACGCGGGTTCATTTAAG+TGG | + | chr5.4:3753321-3753340 | MS.gene024702:CDS | 45.0% | |
| GTCATTAGATGTGGGGGAAT+AGG | - | chr5.4:3753387-3753406 | None:intergenic | 45.0% | |
| TACAGGAAGGACACCCATTT+AGG | - | chr5.4:3755949-3755968 | None:intergenic | 45.0% | |
| TATTATGCGCTGCATCTTGG+GGG | + | chr5.4:3753285-3753304 | MS.gene024702:CDS | 45.0% | |
| TCTAATGACTGGCACAAGCA+AGG | + | chr5.4:3753398-3753417 | MS.gene024702:CDS | 45.0% | |
| TCTACTTCATGCTCAAGGAC+AGG | - | chr5.4:3753357-3753376 | None:intergenic | 45.0% | |
| TCTCAGGATGTCACTAGAGT+CGG | + | chr5.4:3754899-3754918 | MS.gene024702:CDS | 45.0% | |
| TCTTACAACATCAGGACGCA+TGG | + | chr5.4:3754562-3754581 | MS.gene024702:CDS | 45.0% | |
| TGGTACTAATGCCTGCTACT+TGG | + | chr5.4:3754505-3754524 | MS.gene024702:CDS | 45.0% | |
| TGTCTGAGTCCATGCTTCAT+AGG | + | chr5.4:3752812-3752831 | MS.gene024702:intron | 45.0% | |
| TGTGCCAGTCATTAGATGTG+GGG | - | chr5.4:3753394-3753413 | None:intergenic | 45.0% | |
| TGTTGGAAGGTTAAGGCAAG+TGG | + | chr5.4:3751939-3751958 | MS.gene024702:CDS | 45.0% | |
| TTAGCAGCTGCTGGTATTGT+TGG | + | chr5.4:3756082-3756101 | MS.gene024702:CDS | 45.0% | |
| TTTGCGAAAAGTGATGCGCT+CGG | + | chr5.4:3752682-3752701 | MS.gene024702:intron | 45.0% | |
| ! | AACTTTGGTGATTTGGGTGC+AGG | + | chr5.4:3754821-3754840 | MS.gene024702:intron | 45.0% |
| ! | AAGGCAAGCATTGCTTTCAG+AGG | - | chr5.4:3754001-3754020 | None:intergenic | 45.0% |
| ! | AAGGCAAGTGGTTGATGCTA+TGG | + | chr5.4:3751951-3751970 | MS.gene024702:CDS | 45.0% |
| ! | ACTTTGGTGATTTGGGTGCA+GGG | + | chr5.4:3754822-3754841 | MS.gene024702:intron | 45.0% |
| ! | AGGCAAGCATTGCTTTCAGA+GGG | - | chr5.4:3754000-3754019 | None:intergenic | 45.0% |
| ! | TGAAGAAGATTGGTCGTGAC+GGG | + | chr5.4:3756110-3756129 | MS.gene024702:CDS | 45.0% |
| ! | TGTTGTGAAGGTGTGTGATG+TGG | + | chr5.4:3756039-3756058 | MS.gene024702:CDS | 45.0% |
| !! | CAGGAAGCATTTGCACGAAA+TGG | + | chr5.4:3753887-3753906 | MS.gene024702:CDS | 45.0% |
| !! | CCTCGGGCATTTTAATCAAG+TGG | + | chr5.4:3753650-3753669 | MS.gene024702:CDS | 45.0% |
| !! | GCTTTCTGGAGTACCATGTT+AGG | + | chr5.4:3752318-3752337 | MS.gene024702:intron | 45.0% |
| !! | GTTGTGATACGAGTGTTGGA+AGG | + | chr5.4:3751926-3751945 | MS.gene024702:CDS | 45.0% |
| !! | TTACCTCAAAGGTGTCGTTG+AGG | - | chr5.4:3755900-3755919 | None:intergenic | 45.0% |
| !!! | GTTTGGATTGGTTTTGGGAG+AGG | + | chr5.4:3752553-3752572 | MS.gene024702:intron | 45.0% |
| !! | ATAAAAATTAGAAATTTAAA+CGG | - | chr5.4:3752270-3752289 | None:intergenic | 5.0% |
| !!! | TTTTATTTAAATTTTGTTTA+TGG | + | chr5.4:3752405-3752424 | MS.gene024702:intron | 5.0% |
| AATCAAGAAGGTTCACCCGG+TGG | + | chr5.4:3753080-3753099 | MS.gene024702:intron | 50.0% | |
| ACATAGATGTGCCTGTTGGC+CGG | + | chr5.4:3752654-3752673 | MS.gene024702:intron | 50.0% | |
| ACCGAAGATGGATCAGGCAT+TGG | + | chr5.4:3756304-3756323 | MS.gene024702:CDS | 50.0% | |
| ACCGGGTGAACCTTCTTGAT+TGG | - | chr5.4:3753081-3753100 | None:intergenic | 50.0% | |
| ACGCACATAGATGTGCCTGT+TGG | + | chr5.4:3752650-3752669 | MS.gene024702:intron | 50.0% | |
| AGATGTGCATGTAGCTGCCT+TGG | + | chr5.4:3753913-3753932 | MS.gene024702:CDS | 50.0% | |
| AGGCAGCTACATGCACATCT+AGG | - | chr5.4:3753913-3753932 | None:intergenic | 50.0% | |
| CCCAATGCCTGATCCATCTT+CGG | - | chr5.4:3756308-3756327 | None:intergenic | 50.0% | |
| CCGAAGATGGATCAGGCATT+GGG | + | chr5.4:3756305-3756324 | MS.gene024702:CDS | 50.0% | |
| GCCAATCAAGAAGGTTCACC+CGG | + | chr5.4:3753077-3753096 | MS.gene024702:intron | 50.0% | |
| GGATGGGATTTAACGCGCTA+CGG | + | chr5.4:3752973-3752992 | MS.gene024702:intron | 50.0% | |
| GTCGCTCTACTTCATGCTCA+AGG | - | chr5.4:3753362-3753381 | None:intergenic | 50.0% | |
| GTGCCAGTCATTAGATGTGG+GGG | - | chr5.4:3753393-3753412 | None:intergenic | 50.0% | |
| GTGTGATGTGGTGACTCGTA+GGG | + | chr5.4:3756051-3756070 | MS.gene024702:CDS | 50.0% | |
| TCACAGGACAGAAGGGAACT+TGG | + | chr5.4:3753589-3753608 | MS.gene024702:CDS | 50.0% | |
| TCATGCATGGCAGCCATCAA+AGG | - | chr5.4:3755841-3755860 | None:intergenic | 50.0% | |
| TCATGCTCAAGGACAGGAGA+TGG | - | chr5.4:3753351-3753370 | None:intergenic | 50.0% | |
| TCGTGAGGAGAGTCATTCTC+AGG | + | chr5.4:3754883-3754902 | MS.gene024702:CDS | 50.0% | |
| TGCATGTAGCTGCCTTGGTA+AGG | + | chr5.4:3753918-3753937 | MS.gene024702:intron | 50.0% | |
| TGTATCTCGGTGACATCGTG+AGG | + | chr5.4:3754868-3754887 | MS.gene024702:CDS | 50.0% | |
| TGTGTGATGTGGTGACTCGT+AGG | + | chr5.4:3756050-3756069 | MS.gene024702:CDS | 50.0% | |
| TTTCAACGCCGTTCGTACTG+AGG | + | chr5.4:3754949-3754968 | MS.gene024702:CDS | 50.0% | |
| ! | CGAAGATGGATCAGGCATTG+GGG | + | chr5.4:3756306-3756325 | MS.gene024702:CDS | 50.0% |
| ! | GCAAGTGGTTGATGCTATGG+CGG | + | chr5.4:3751954-3751973 | MS.gene024702:CDS | 50.0% |
| ! | TTTGATGGCTGCCATGCATG+AGG | + | chr5.4:3755840-3755859 | MS.gene024702:CDS | 50.0% |
| !! | AAGAGTGGTAGTGGGAGTGA+CGG | + | chr5.4:3751792-3751811 | MS.gene024702:CDS | 50.0% |
| ACAATGCATGGCGCGTCTGT+TGG | - | chr5.4:3753005-3753024 | None:intergenic | 55.0% | |
| ACAGACGCGCCATGCATTGT+TGG | + | chr5.4:3753005-3753024 | MS.gene024702:intron | 55.0% | |
| ! | AAGATTGGTCGTGACGGGAG+TGG | + | chr5.4:3756115-3756134 | MS.gene024702:CDS | 55.0% |
| ! | AGTGGTTGATGCTATGGCGG+TGG | + | chr5.4:3751957-3751976 | MS.gene024702:CDS | 55.0% |
| ! | GCCGGTTTAGCTTCTGAAGG+TGG | + | chr5.4:3751988-3752007 | MS.gene024702:CDS | 55.0% |
| !! | CACGCCGGTTTAGCTTCTGA+AGG | + | chr5.4:3751985-3752004 | MS.gene024702:CDS | 55.0% |
| !! | TCGGTGTCATGTCGTGTTGC+CGG | - | chr5.4:3752721-3752740 | None:intergenic | 55.0% |
| CGCAAAGCAAACCGGCCAAC+AGG | - | chr5.4:3752668-3752687 | None:intergenic | 60.0% | |
| GCATCACAGGTGGACGGAGT+AGG | + | chr5.4:3756140-3756159 | MS.gene024702:CDS | 60.0% | |
| GCTCGGATACGTGTCGTGTC+CGG | + | chr5.4:3752699-3752718 | MS.gene024702:intron | 60.0% | |
| GCTGCTCGATTAGCAGCTGC+TGG | + | chr5.4:3756073-3756092 | MS.gene024702:CDS | 60.0% | |
| GTGGTGGCATCACAGGTGGA+CGG | + | chr5.4:3756134-3756153 | MS.gene024702:CDS | 60.0% | |
| ! | ATTGGTCGTGACGGGAGTGG+TGG | + | chr5.4:3756118-3756137 | MS.gene024702:CDS | 60.0% |
| ATGGCGGTGGAGATGCACGC+CGG | + | chr5.4:3751970-3751989 | MS.gene024702:CDS | 65.0% | |
| GACGGGAGTGGTGGCATCAC+AGG | + | chr5.4:3756127-3756146 | MS.gene024702:CDS | 65.0% | |
| GGGAGTGGTGGCATCACAGG+TGG | + | chr5.4:3756130-3756149 | MS.gene024702:CDS | 65.0% | |
| !! | GGTAGTGGGAGTGACGGCGA+CGG | + | chr5.4:3751798-3751817 | MS.gene024702:CDS | 65.0% |
| AGTGGGAGTGACGGCGACGG+TGG | + | chr5.4:3751801-3751820 | MS.gene024702:CDS | 70.0% | |
| GGGAGTGACGGCGACGGTGG+CGG | + | chr5.4:3751804-3751823 | MS.gene024702:CDS | 75.0% | |
| ! | AGTGACGGCGACGGTGGCGG+TGG | + | chr5.4:3751807-3751826 | MS.gene024702:CDS | 75.0% |
| !! | GACGGCGACGGTGGCGGTGG+CGG | + | chr5.4:3751810-3751829 | MS.gene024702:CDS | 80.0% |
| !! | GGTGGCGGCGTGTGCGGTGG+CGG | + | chr5.4:3751825-3751844 | MS.gene024702:CDS | 80.0% |
| !! | GGTGGCGGTGGCGGCGTGTG+CGG | + | chr5.4:3751819-3751838 | MS.gene024702:CDS | 80.0% |
| !! | GGCGGCGTGTGCGGTGGCGG+CGG | + | chr5.4:3751828-3751847 | MS.gene024702:CDS | 85.0% |
| !! | GGCGGTGGCGGCGTGTGCGG+TGG | + | chr5.4:3751822-3751841 | MS.gene024702:CDS | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 3751787 | 3756357 | 3751787 | ID=MS.gene024702 |
| chr5.4 | mRNA | 3751787 | 3756357 | 3751787 | ID=MS.gene024702.t1;Parent=MS.gene024702 |
| chr5.4 | exon | 3751787 | 3752058 | 3751787 | ID=MS.gene024702.t1.exon1;Parent=MS.gene024702.t1 |
| chr5.4 | CDS | 3751787 | 3752058 | 3751787 | ID=cds.MS.gene024702.t1;Parent=MS.gene024702.t1 |
| chr5.4 | exon | 3753269 | 3753419 | 3753269 | ID=MS.gene024702.t1.exon2;Parent=MS.gene024702.t1 |
| chr5.4 | CDS | 3753269 | 3753419 | 3753269 | ID=cds.MS.gene024702.t1;Parent=MS.gene024702.t1 |
| chr5.4 | exon | 3753523 | 3753699 | 3753523 | ID=MS.gene024702.t1.exon3;Parent=MS.gene024702.t1 |
| chr5.4 | CDS | 3753523 | 3753699 | 3753523 | ID=cds.MS.gene024702.t1;Parent=MS.gene024702.t1 |
| chr5.4 | exon | 3753860 | 3753934 | 3753860 | ID=MS.gene024702.t1.exon4;Parent=MS.gene024702.t1 |
| chr5.4 | CDS | 3753860 | 3753934 | 3753860 | ID=cds.MS.gene024702.t1;Parent=MS.gene024702.t1 |
| chr5.4 | exon | 3754428 | 3754583 | 3754428 | ID=MS.gene024702.t1.exon5;Parent=MS.gene024702.t1 |
| chr5.4 | CDS | 3754428 | 3754583 | 3754428 | ID=cds.MS.gene024702.t1;Parent=MS.gene024702.t1 |
| chr5.4 | exon | 3754666 | 3754764 | 3754666 | ID=MS.gene024702.t1.exon6;Parent=MS.gene024702.t1 |
| chr5.4 | CDS | 3754666 | 3754764 | 3754666 | ID=cds.MS.gene024702.t1;Parent=MS.gene024702.t1 |
| chr5.4 | exon | 3754843 | 3754970 | 3754843 | ID=MS.gene024702.t1.exon7;Parent=MS.gene024702.t1 |
| chr5.4 | CDS | 3754843 | 3754970 | 3754843 | ID=cds.MS.gene024702.t1;Parent=MS.gene024702.t1 |
| chr5.4 | exon | 3755834 | 3755915 | 3755834 | ID=MS.gene024702.t1.exon8;Parent=MS.gene024702.t1 |
| chr5.4 | CDS | 3755834 | 3755915 | 3755834 | ID=cds.MS.gene024702.t1;Parent=MS.gene024702.t1 |
| chr5.4 | exon | 3756007 | 3756357 | 3756007 | ID=MS.gene024702.t1.exon9;Parent=MS.gene024702.t1 |
| chr5.4 | CDS | 3756007 | 3756357 | 3756007 | ID=cds.MS.gene024702.t1;Parent=MS.gene024702.t1 |
| Gene Sequence |
| Protein sequence |
