Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25041.t1 | XP_003627448.1 | 99 | 524 | 5 | 0 | 1 | 524 | 1 | 524 | 2.90E-305 | 1057 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25041.t1 | Q9LDV4 | 76.8 | 538 | 102 | 2 | 10 | 524 | 3 | 540 | 6.0e-243 | 841.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25041.t1 | G7L970 | 99.0 | 524 | 5 | 0 | 1 | 524 | 1 | 524 | 2.1e-305 | 1057.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene051024 | MS.gene25041 | 0.852399 | 4.74E-61 | -1.69E-46 |
MS.gene056647 | MS.gene25041 | 0.824367 | 8.39E-54 | -1.69E-46 |
MS.gene058170 | MS.gene25041 | 0.803683 | 3.10E-49 | -1.69E-46 |
MS.gene058172 | MS.gene25041 | 0.82516 | 5.45E-54 | -1.69E-46 |
MS.gene058174 | MS.gene25041 | 0.809572 | 1.77E-50 | -1.69E-46 |
MS.gene059046 | MS.gene25041 | 0.818331 | 2.07E-52 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene058512 | MS.gene25041 | PPI |
MS.gene30927 | MS.gene25041 | PPI |
MS.gene29182 | MS.gene25041 | PPI |
MS.gene25041 | MS.gene85425 | PPI |
MS.gene25041 | MS.gene027709 | PPI |
MS.gene86206 | MS.gene25041 | PPI |
MS.gene028619 | MS.gene25041 | PPI |
MS.gene071560 | MS.gene25041 | PPI |
MS.gene25041 | MS.gene85428 | PPI |
MS.gene25041 | MS.gene31184 | PPI |
MS.gene44305 | MS.gene25041 | PPI |
MS.gene25041 | MS.gene023945 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25041.t1 | MTR_8g023140 | 99.046 | 524 | 5 | 0 | 1 | 524 | 1 | 524 | 0.0 | 1086 |
MS.gene25041.t1 | MTR_5g033230 | 48.963 | 482 | 235 | 3 | 44 | 524 | 3 | 474 | 4.72e-165 | 477 |
MS.gene25041.t1 | MTR_5g033230 | 49.556 | 450 | 216 | 3 | 44 | 492 | 3 | 442 | 4.48e-152 | 443 |
MS.gene25041.t1 | MTR_6g091760 | 22.911 | 371 | 258 | 14 | 149 | 514 | 86 | 433 | 1.12e-17 | 85.9 |
MS.gene25041.t1 | MTR_8g098930 | 22.792 | 351 | 244 | 12 | 158 | 503 | 94 | 422 | 1.36e-16 | 82.8 |
MS.gene25041.t1 | MTR_8g061360 | 21.965 | 346 | 218 | 9 | 153 | 485 | 77 | 383 | 5.27e-16 | 80.5 |
MS.gene25041.t1 | MTR_8g101750 | 22.642 | 371 | 259 | 14 | 149 | 514 | 78 | 425 | 2.21e-15 | 79.0 |
MS.gene25041.t1 | MTR_6g463260 | 21.271 | 362 | 258 | 12 | 154 | 511 | 183 | 521 | 8.68e-15 | 77.4 |
MS.gene25041.t1 | MTR_2g090615 | 23.699 | 346 | 210 | 14 | 154 | 485 | 81 | 386 | 2.87e-14 | 75.1 |
MS.gene25041.t1 | MTR_7g079080 | 21.563 | 371 | 263 | 12 | 149 | 514 | 84 | 431 | 2.51e-13 | 72.8 |
MS.gene25041.t1 | MTR_5g015020 | 22.193 | 374 | 265 | 12 | 149 | 514 | 77 | 432 | 5.98e-13 | 71.2 |
MS.gene25041.t1 | MTR_3g103550 | 24.026 | 308 | 207 | 12 | 180 | 482 | 109 | 394 | 1.33e-12 | 70.5 |
MS.gene25041.t1 | MTR_5g011400 | 21.922 | 333 | 237 | 11 | 180 | 511 | 178 | 488 | 1.65e-12 | 70.1 |
MS.gene25041.t1 | MTR_8g028600 | 23.582 | 335 | 231 | 11 | 182 | 514 | 119 | 430 | 2.26e-12 | 69.7 |
MS.gene25041.t1 | MTR_7g079080 | 22.156 | 334 | 234 | 11 | 184 | 514 | 16 | 326 | 5.06e-12 | 68.2 |
MS.gene25041.t1 | MTR_4g011820 | 25.656 | 343 | 195 | 15 | 154 | 485 | 64 | 357 | 5.91e-12 | 67.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene25041.t1 | AT1G72330 | 76.766 | 538 | 102 | 2 | 10 | 524 | 3 | 540 | 0.0 | 863 |
MS.gene25041.t1 | AT1G72330 | 74.955 | 551 | 102 | 3 | 10 | 524 | 3 | 553 | 0.0 | 855 |
MS.gene25041.t1 | AT1G17290 | 83.958 | 480 | 77 | 0 | 45 | 524 | 64 | 543 | 0.0 | 832 |
MS.gene25041.t1 | AT1G72330 | 74.939 | 407 | 79 | 2 | 10 | 393 | 3 | 409 | 0.0 | 627 |
MS.gene25041.t1 | AT1G70580 | 50.000 | 476 | 227 | 3 | 50 | 524 | 9 | 474 | 5.05e-167 | 482 |
MS.gene25041.t1 | AT1G70580 | 50.000 | 476 | 227 | 3 | 50 | 524 | 9 | 474 | 5.05e-167 | 482 |
MS.gene25041.t1 | AT1G70580 | 50.000 | 476 | 227 | 3 | 50 | 524 | 9 | 474 | 5.05e-167 | 482 |
MS.gene25041.t1 | AT1G70580 | 50.000 | 476 | 227 | 3 | 50 | 524 | 9 | 474 | 5.05e-167 | 482 |
MS.gene25041.t1 | AT1G23310 | 50.526 | 475 | 224 | 3 | 51 | 524 | 10 | 474 | 5.11e-167 | 482 |
MS.gene25041.t1 | AT1G23310 | 51.591 | 440 | 202 | 3 | 51 | 489 | 10 | 439 | 1.35e-154 | 449 |
MS.gene25041.t1 | AT1G62960 | 23.324 | 373 | 263 | 11 | 142 | 511 | 194 | 546 | 1.35e-19 | 92.4 |
MS.gene25041.t1 | AT5G51690 | 23.784 | 370 | 253 | 15 | 154 | 518 | 25 | 370 | 1.95e-18 | 87.4 |
MS.gene25041.t1 | AT5G51690 | 23.529 | 374 | 257 | 15 | 150 | 518 | 144 | 493 | 2.54e-18 | 88.2 |
MS.gene25041.t1 | AT2G24850 | 22.133 | 375 | 244 | 11 | 153 | 517 | 86 | 422 | 5.16e-18 | 87.0 |
MS.gene25041.t1 | AT4G28410 | 23.864 | 352 | 240 | 9 | 135 | 485 | 87 | 411 | 5.36e-18 | 87.0 |
MS.gene25041.t1 | AT4G28410 | 23.647 | 351 | 240 | 9 | 135 | 484 | 87 | 410 | 6.28e-18 | 86.7 |
MS.gene25041.t1 | AT4G11280 | 23.656 | 372 | 258 | 12 | 154 | 521 | 93 | 442 | 9.20e-18 | 86.7 |
MS.gene25041.t1 | AT5G36160 | 22.632 | 380 | 257 | 12 | 142 | 517 | 68 | 414 | 6.05e-17 | 83.6 |
MS.gene25041.t1 | AT4G28420 | 21.684 | 392 | 250 | 12 | 142 | 519 | 86 | 434 | 7.99e-17 | 83.6 |
MS.gene25041.t1 | AT5G53970 | 23.580 | 352 | 227 | 12 | 142 | 485 | 59 | 376 | 1.31e-16 | 82.4 |
MS.gene25041.t1 | AT2G28815 | 46.154 | 104 | 24 | 3 | 418 | 521 | 63 | 134 | 3.53e-16 | 79.7 |
MS.gene25041.t1 | AT2G20610 | 22.135 | 384 | 260 | 12 | 136 | 514 | 86 | 435 | 6.53e-16 | 80.5 |
MS.gene25041.t1 | AT4G26200 | 22.835 | 381 | 258 | 15 | 147 | 517 | 89 | 443 | 7.32e-16 | 80.5 |
MS.gene25041.t1 | AT4G23590 | 21.226 | 424 | 278 | 16 | 107 | 517 | 27 | 407 | 1.31e-15 | 79.3 |
MS.gene25041.t1 | AT4G37770 | 23.342 | 377 | 252 | 13 | 149 | 514 | 77 | 427 | 1.53e-15 | 79.7 |
MS.gene25041.t1 | AT4G28420 | 21.905 | 315 | 199 | 9 | 142 | 442 | 86 | 367 | 1.70e-15 | 79.0 |
MS.gene25041.t1 | AT2G20610 | 21.937 | 351 | 238 | 10 | 136 | 481 | 86 | 405 | 5.40e-15 | 77.8 |
MS.gene25041.t1 | AT3G61510 | 22.222 | 369 | 254 | 14 | 152 | 514 | 87 | 428 | 1.48e-14 | 76.6 |
MS.gene25041.t1 | AT4G08040 | 24.709 | 344 | 231 | 14 | 144 | 482 | 70 | 390 | 4.26e-14 | 75.1 |
MS.gene25041.t1 | AT4G23600 | 21.447 | 387 | 249 | 16 | 114 | 486 | 34 | 379 | 5.76e-13 | 71.2 |
MS.gene25041.t1 | AT3G49700 | 23.836 | 365 | 247 | 13 | 158 | 514 | 86 | 427 | 3.55e-12 | 68.9 |
MS.gene25041.t1 | AT4G23600 | 21.204 | 382 | 246 | 16 | 114 | 481 | 34 | 374 | 1.26e-11 | 67.0 |
MS.gene25041.t1 | AT1G01480 | 21.978 | 364 | 261 | 11 | 158 | 517 | 94 | 438 | 1.78e-11 | 67.0 |
MS.gene25041.t1 | AT5G65800 | 22.727 | 374 | 258 | 13 | 149 | 514 | 77 | 427 | 2.89e-11 | 66.2 |
MS.gene25041.t1 | AT1G01480 | 22.024 | 336 | 241 | 10 | 184 | 517 | 16 | 332 | 7.51e-11 | 64.7 |
Find 138 sgRNAs with CRISPR-Local
Find 413 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACCTGCCCTGTTGGATTGCC+TGG | 0.174028 | 8.1:-77449789 | None:intergenic |
GAAAGAAGGTTTGGTTCTTT+TGG | 0.206185 | 8.1:+77449963 | MS.gene25041:CDS |
TGCTCCTTCTGCTTTGTTGC+AGG | 0.238077 | 8.1:-77451149 | None:intergenic |
ATTTCCATATCAGGGTATTC+AGG | 0.251842 | 8.1:+77448844 | MS.gene25041:intron |
CCTTCGTTCTTTGTCTTCAA+TGG | 0.266946 | 8.1:+77445498 | MS.gene25041:CDS |
CCTATCTTCTTGAGGTAATA+TGG | 0.270115 | 8.1:-77451775 | None:intergenic |
ATTGTTGTTGTTCCTGGTTC+TGG | 0.272343 | 8.1:+77451283 | MS.gene25041:CDS |
GTTGTTCCTGGTTCTGGTTT+TGG | 0.293635 | 8.1:+77451289 | MS.gene25041:CDS |
TGGAAAGCGAGGAGGTTATA+TGG | 0.296188 | 8.1:+77450572 | MS.gene25041:CDS |
ACTGGAATTGTTGTTGTTCC+TGG | 0.300917 | 8.1:+77451277 | MS.gene25041:CDS |
ATGTGACTATCCAGCTCTTT+TGG | 0.315701 | 8.1:+77448109 | MS.gene25041:CDS |
AGTCCAAGGGCATCAGTGTT+AGG | 0.320042 | 8.1:+77449748 | MS.gene25041:CDS |
AAGTAAGCGTTTGCAATAGA+AGG | 0.322961 | 8.1:-77451248 | None:intergenic |
AATCCGCTGCAGACAGATTC+AGG | 0.324640 | 8.1:+77445410 | MS.gene25041:CDS |
CAAATTGTGGATCAGATTCC+TGG | 0.329883 | 8.1:+77448710 | MS.gene25041:CDS |
TAAATTTGTTCCCTCACATC+TGG | 0.331054 | 8.1:-77450612 | None:intergenic |
AAAGAGTGAAATTTCTTCTC+AGG | 0.347700 | 8.1:-77450354 | None:intergenic |
GTTGCTTCATCAAGATAATA+TGG | 0.353298 | 8.1:-77449675 | None:intergenic |
TAGGCACCAGTTGCTCTTCC+AGG | 0.356149 | 8.1:-77448728 | None:intergenic |
CATTGGAAATCCTCAGTCTC+TGG | 0.360980 | 8.1:+77447960 | MS.gene25041:CDS |
AGAAGCTTTAAACAAATTAG+AGG | 0.385150 | 8.1:+77451120 | MS.gene25041:CDS |
TTATTGTCTTTCAAGGTTCC+CGG | 0.386428 | 8.1:+77451732 | MS.gene25041:intron |
GTGAAACACAGGGTTTGTTC+AGG | 0.393334 | 8.1:+77448138 | MS.gene25041:CDS |
TCTTGATGAAGCAACTGGTT+GGG | 0.394854 | 8.1:+77449683 | MS.gene25041:CDS |
CTTGATGAAGCAACTGGTTG+GGG | 0.405077 | 8.1:+77449684 | MS.gene25041:CDS |
CAATACCTGACTGTGACTAT+AGG | 0.411099 | 8.1:-77448747 | None:intergenic |
TAGATAATTTACTGCAACAT+TGG | 0.412151 | 8.1:+77447943 | MS.gene25041:intron |
TAACCTTTGCACGCGTAGTA+AGG | 0.415715 | 8.1:-77450957 | None:intergenic |
TACCCTCCATGGTGGCCATC+TGG | 0.418290 | 8.1:+77449169 | MS.gene25041:CDS |
TTGCAGCTCACCTGCCCTGT+TGG | 0.421430 | 8.1:-77449798 | None:intergenic |
CAGATTCCTGGAAGAGCAAC+TGG | 0.422292 | 8.1:+77448722 | MS.gene25041:CDS |
TGAGTAATTGCATCATCATA+TGG | 0.423018 | 8.1:-77449082 | None:intergenic |
ATAAACCCAGGCAATCCAAC+AGG | 0.430090 | 8.1:+77449783 | MS.gene25041:CDS |
CCATATTACCTCAAGAAGAT+AGG | 0.434491 | 8.1:+77451775 | MS.gene25041:CDS |
CCTGCCCTGTTGGATTGCCT+GGG | 0.436736 | 8.1:-77449788 | None:intergenic |
ATCTGTCAAGAAAATGTCAT+TGG | 0.442497 | 8.1:-77448924 | None:intergenic |
CGAGTCTTATGAGTCATTCA+TGG | 0.442957 | 8.1:+77450909 | MS.gene25041:CDS |
TATTATCTTGATGAAGCAAC+TGG | 0.443419 | 8.1:+77449678 | MS.gene25041:CDS |
TGCTCAAAATATTAACCCTC+AGG | 0.447339 | 8.1:+77445546 | MS.gene25041:CDS |
TCATCAAACGAATGAGCATC+TGG | 0.451967 | 8.1:-77447237 | None:intergenic |
TCGGATTCGCCTGCCTGAAA+AGG | 0.452019 | 8.1:+77451186 | MS.gene25041:CDS |
TTTCCATATCAGGGTATTCA+GGG | 0.458818 | 8.1:+77448845 | MS.gene25041:intron |
GTTTGGCTTCAGGCTATCAC+GGG | 0.460932 | 8.1:+77450544 | MS.gene25041:intron |
ACCTCAAGAAGATAGGATTC+CGG | 0.467686 | 8.1:+77451782 | MS.gene25041:CDS |
TGTTTGGCTTCAGGCTATCA+CGG | 0.469517 | 8.1:+77450543 | MS.gene25041:intron |
AACACTGATGCCCTTGGACT+TGG | 0.471424 | 8.1:-77449745 | None:intergenic |
AGAGTTCCATCAAAAGTTCA+TGG | 0.472947 | 8.1:+77451824 | MS.gene25041:CDS |
CTTTCAAGGTTCCCGGCACA+TGG | 0.473583 | 8.1:+77451739 | MS.gene25041:intron |
GTCAAGCGGGTGACAATGGC+CGG | 0.476132 | 8.1:-77451801 | None:intergenic |
GTATCTCGGTCCATGGGATA+CGG | 0.483453 | 8.1:+77450384 | MS.gene25041:CDS |
CGTTTGCAATAGAAGGCATC+AGG | 0.485052 | 8.1:-77451241 | None:intergenic |
GTCCAAGGGCATCAGTGTTA+GGG | 0.485526 | 8.1:+77449749 | MS.gene25041:CDS |
GAAATTTCACTCTTTCAAGA+AGG | 0.487439 | 8.1:+77450362 | MS.gene25041:CDS |
AGCCCTAACACTGATGCCCT+TGG | 0.492947 | 8.1:-77449751 | None:intergenic |
AAATTTGTTCCCTCACATCT+GGG | 0.493584 | 8.1:-77450611 | None:intergenic |
ATTACTCATTAGATCAGAAA+AGG | 0.495437 | 8.1:+77449097 | MS.gene25041:CDS |
CAAGAAGGTATCTCGGTCCA+TGG | 0.500046 | 8.1:+77450377 | MS.gene25041:CDS |
TCTTGCTGAGGAAAATCAAC+GGG | 0.500346 | 8.1:+77449921 | MS.gene25041:CDS |
CACCTAAAATGCCATGTGCC+GGG | 0.501375 | 8.1:-77451750 | None:intergenic |
GGAGGTTATATGGAGGTGAC+TGG | 0.502434 | 8.1:+77450582 | MS.gene25041:CDS |
ATCTTGATGAAGCAACTGGT+TGG | 0.502802 | 8.1:+77449682 | MS.gene25041:CDS |
TGCAATAGCCGCTGGAATTG+AGG | 0.504928 | 8.1:+77448877 | MS.gene25041:CDS |
CTCTGTCAAGCGGGTGACAA+TGG | 0.505154 | 8.1:-77451805 | None:intergenic |
AAATGTCAGTATGCTGTTCG+AGG | 0.506339 | 8.1:+77446812 | MS.gene25041:CDS |
AATCTTTGTTCTAACATCAC+TGG | 0.506748 | 8.1:+77450651 | MS.gene25041:CDS |
CGGATTCAATAGAGAGAGCT+TGG | 0.512091 | 8.1:+77448687 | MS.gene25041:CDS |
AGAGATTGTTACACTTGCTC+AGG | 0.512267 | 8.1:+77446835 | MS.gene25041:CDS |
ATCATTGTCGCCGTATCCCA+TGG | 0.518872 | 8.1:-77450394 | None:intergenic |
ACTCTTTCAAGAAGGTATCT+CGG | 0.524240 | 8.1:+77450370 | MS.gene25041:CDS |
TTTGATCATGAGTCCTCCTA+AGG | 0.526622 | 8.1:+77450689 | MS.gene25041:CDS |
AAACGAATGAGCATCTGGAT+TGG | 0.528171 | 8.1:-77447232 | None:intergenic |
ATCTGAACTCAAGAAGCAGT+TGG | 0.529742 | 8.1:+77449716 | MS.gene25041:CDS |
GAGCAATGTATCTGTTTCCT+CGG | 0.534079 | 8.1:+77451167 | MS.gene25041:CDS |
TAGAGAGGGTACTGAGGGAT+GGG | 0.535149 | 8.1:-77449134 | None:intergenic |
ATTGGAAATCCTCAGTCTCT+GGG | 0.536191 | 8.1:+77447961 | MS.gene25041:CDS |
AGAGAGAGCTTGGCAAATTG+TGG | 0.538808 | 8.1:+77448697 | MS.gene25041:CDS |
TTACGTGATGCAATAGCCGC+TGG | 0.539193 | 8.1:+77448869 | MS.gene25041:CDS |
GCCACCATGGAGGGTAATTG+AGG | 0.545063 | 8.1:-77449162 | None:intergenic |
GACAAAGAACGAAGGGGAGA+AGG | 0.545190 | 8.1:-77445490 | None:intergenic |
TTCCCTTACTACGCGTGCAA+AGG | 0.545625 | 8.1:+77450954 | MS.gene25041:CDS |
TACCAGATGGCCACCATGGA+GGG | 0.546397 | 8.1:-77449171 | None:intergenic |
GAGGGAACAAATTTATAAAG+TGG | 0.548832 | 8.1:+77450620 | MS.gene25041:CDS |
CCCAGGCAATCCAACAGGGC+AGG | 0.551402 | 8.1:+77449788 | MS.gene25041:CDS |
GAGAAGGATGGTGATACTGT+TGG | 0.552996 | 8.1:-77445474 | None:intergenic |
AACCTTTGCACGCGTAGTAA+GGG | 0.553568 | 8.1:-77450956 | None:intergenic |
GTAATTGAGGCTGAATAGAG+AGG | 0.554085 | 8.1:-77449149 | None:intergenic |
TGAGTCATTCATGGCTGAGA+AGG | 0.555179 | 8.1:+77450918 | MS.gene25041:CDS |
GTTGGAAGATGCCAAGTCCA+AGG | 0.558140 | 8.1:+77449734 | MS.gene25041:CDS |
AAAATGTCATTGGCATTACA+AGG | 0.558712 | 8.1:-77448914 | None:intergenic |
TGGTGCCTATAGTCACAGTC+AGG | 0.559076 | 8.1:+77448742 | MS.gene25041:CDS |
TCAGCCTCAATTACCCTCCA+TGG | 0.559522 | 8.1:+77449158 | MS.gene25041:CDS |
GAAGCTTTAAACAAATTAGA+GGG | 0.560738 | 8.1:+77451121 | MS.gene25041:CDS |
GGCTGCTGGCCCAGAGACTG+AGG | 0.562423 | 8.1:-77447970 | None:intergenic |
TTGATGGAACTCTGTCAAGC+GGG | 0.564338 | 8.1:-77451814 | None:intergenic |
TACCGACTTACCTTTGGAGA+CGG | 0.565061 | 8.1:-77450439 | None:intergenic |
GGCAAAGGGTTAACCTTAGG+AGG | 0.566598 | 8.1:-77450702 | None:intergenic |
GCACCTAAAATGCCATGTGC+CGG | 0.567511 | 8.1:-77451751 | None:intergenic |
TCAGGCTATCACGGGGAGTG+TGG | 0.570035 | 8.1:+77450552 | MS.gene25041:intron |
TTTGGACAAAAGTGAAACAC+AGG | 0.570857 | 8.1:+77448127 | MS.gene25041:CDS |
GCTTTAGCTGTTATAAACCC+AGG | 0.575885 | 8.1:+77449771 | MS.gene25041:CDS |
AAACGCTTACTTAATGCCAC+TGG | 0.581835 | 8.1:+77451259 | MS.gene25041:CDS |
CATTGAAGACAAAGAACGAA+GGG | 0.582881 | 8.1:-77445497 | None:intergenic |
ATAGAGAGGGTACTGAGGGA+TGG | 0.592245 | 8.1:-77449135 | None:intergenic |
AAGAAGGTATCTCGGTCCAT+GGG | 0.592457 | 8.1:+77450378 | MS.gene25041:CDS |
GAGGTTATATGGAGGTGACT+GGG | 0.595186 | 8.1:+77450583 | MS.gene25041:CDS |
CACGGGGAGTGTGGAAAGCG+AGG | 0.595737 | 8.1:+77450561 | MS.gene25041:CDS |
AGATGCTCATTCGTTTGATG+AGG | 0.599601 | 8.1:+77447239 | MS.gene25041:CDS |
GTAACCTGCAACAAAGCAGA+AGG | 0.602222 | 8.1:+77451145 | MS.gene25041:CDS |
GAGTCATTCATGGCTGAGAA+GGG | 0.602471 | 8.1:+77450919 | MS.gene25041:CDS |
CTCATTAGATCAGAAAAGGA+TGG | 0.606155 | 8.1:+77449101 | MS.gene25041:CDS |
GCCGGAATCCTATCTTCTTG+AGG | 0.606322 | 8.1:-77451783 | None:intergenic |
ACTTTACCAGATGGCCACCA+TGG | 0.607824 | 8.1:-77449175 | None:intergenic |
CTGAATAGAGAGGGTACTGA+GGG | 0.609191 | 8.1:-77449139 | None:intergenic |
TTTGATGGAACTCTGTCAAG+CGG | 0.614854 | 8.1:-77451815 | None:intergenic |
TTGGAAGATGCCAAGTCCAA+GGG | 0.616464 | 8.1:+77449735 | MS.gene25041:CDS |
TTCTTGCTGAGGAAAATCAA+CGG | 0.620444 | 8.1:+77449920 | MS.gene25041:CDS |
ACCTGTCCAAAACCAGAACC+AGG | 0.621813 | 8.1:-77451295 | None:intergenic |
GCTGAATAGAGAGGGTACTG+AGG | 0.624000 | 8.1:-77449140 | None:intergenic |
GCAATAGAAGGCATCAGGTG+CGG | 0.630196 | 8.1:-77451236 | None:intergenic |
GCTGGAATTGAGGAGCGCGA+TGG | 0.630272 | 8.1:+77448887 | MS.gene25041:CDS |
CCATTGAAGACAAAGAACGA+AGG | 0.630660 | 8.1:-77445498 | None:intergenic |
ATGCCTGAATCTGTCTGCAG+CGG | 0.634809 | 8.1:-77445413 | None:intergenic |
AAGAACGAAGGGGAGAAGGA+TGG | 0.635915 | 8.1:-77445486 | None:intergenic |
AAAGGCTATCAAAGCTGCAG+AGG | 0.637012 | 8.1:+77451204 | MS.gene25041:CDS |
TAATTGAGGCTGAATAGAGA+GGG | 0.644456 | 8.1:-77449148 | None:intergenic |
AATTTGTTCCCTCACATCTG+GGG | 0.645832 | 8.1:-77450610 | None:intergenic |
TTACCAGATGGCCACCATGG+AGG | 0.678131 | 8.1:-77449172 | None:intergenic |
AAAGCGAGGAGGTTATATGG+AGG | 0.681303 | 8.1:+77450575 | MS.gene25041:CDS |
TTGATGAAGCAACTGGTTGG+GGG | 0.682358 | 8.1:+77449685 | MS.gene25041:CDS |
TTGGACAAAAGTGAAACACA+GGG | 0.683072 | 8.1:+77448128 | MS.gene25041:CDS |
GCCTCAATTACCCTCCATGG+TGG | 0.683447 | 8.1:+77449161 | MS.gene25041:CDS |
TAAACCCAGGCAATCCAACA+GGG | 0.684915 | 8.1:+77449784 | MS.gene25041:CDS |
AGGAACAACAACAATTCCAG+TGG | 0.692125 | 8.1:-77451275 | None:intergenic |
TTTGGCTTCAGGCTATCACG+GGG | 0.695438 | 8.1:+77450545 | MS.gene25041:intron |
ATGTCTGTAGGTTCTTGCTG+AGG | 0.696225 | 8.1:+77449909 | MS.gene25041:intron |
GGGGAGTGTGGAAAGCGAGG+AGG | 0.705425 | 8.1:+77450564 | MS.gene25041:CDS |
ATTGAAGACAAAGAACGAAG+GGG | 0.709504 | 8.1:-77445496 | None:intergenic |
ATCGCGCTCCTCAATTCCAG+CGG | 0.721398 | 8.1:-77448885 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAAATAAATTTTTCTTTAAG+AGG | - | chr8.1:77450726-77450745 | None:intergenic | 10.0% |
!!! | ATTAGTTTATAATCAATAAA+AGG | - | chr8.1:77451699-77451718 | None:intergenic | 10.0% |
!!! | CTTAAAGAAAAATTTATTTT+TGG | + | chr8.1:77450726-77450745 | MS.gene25041:intron | 10.0% |
!! | AAAAACAAAAAACAACAAAA+AGG | - | chr8.1:77445629-77445648 | None:intergenic | 15.0% |
!! | AAAAACAAAAAACAACAAAA+CGG | - | chr8.1:77445629-77445648 | None:intergenic | 15.0% |
!! | AAAACAAAAAACAACAAAAA+GGG | - | chr8.1:77445765-77445784 | None:intergenic | 15.0% |
!! | ACAAACAAACTTATAAATTA+AGG | - | chr8.1:77446156-77446175 | None:intergenic | 15.0% |
!! | ATATTTACTTACAATTTCAT+TGG | - | chr8.1:77451609-77451628 | None:intergenic | 15.0% |
!! | ATTTAAATTATTGTCTTTCA+AGG | + | chr8.1:77451725-77451744 | MS.gene25041:intron | 15.0% |
!! | CAAACAAACTTATAAATTAA+GGG | - | chr8.1:77446155-77446174 | None:intergenic | 15.0% |
!! | TGATATTACAATTTATCAAT+TGG | + | chr8.1:77447694-77447713 | MS.gene25041:intron | 15.0% |
!! | TTATGAATTTATTCATTGTT+GGG | - | chr8.1:77451060-77451079 | None:intergenic | 15.0% |
!! | TTTATGAATTTATTCATTGT+TGG | - | chr8.1:77451061-77451080 | None:intergenic | 15.0% |
!!! | AATTTTGTTATTGTTTCTAA+AGG | + | chr8.1:77449650-77449669 | MS.gene25041:intron | 15.0% |
!!! | AGAAAATTTTACACTAATAT+TGG | + | chr8.1:77451583-77451602 | MS.gene25041:intron | 15.0% |
!!! | CTTTTTCAATTTTTTTATGT+GGG | + | chr8.1:77445813-77445832 | MS.gene25041:intron | 15.0% |
!!! | GTTTATCATATTTGATAATA+TGG | + | chr8.1:77449876-77449895 | MS.gene25041:intron | 15.0% |
!!! | TTTTGTTGTTTTTTGTTTTT+AGG | + | chr8.1:77445629-77445648 | MS.gene25041:intron | 15.0% |
!! | AAAACAAAAAACAACAAAAC+GGG | - | chr8.1:77445628-77445647 | None:intergenic | 20.0% |
!! | AAAACCAAAAATAACAATCA+AGG | - | chr8.1:77446017-77446036 | None:intergenic | 20.0% |
!! | AAATCAGAAAAAATGGTATA+TGG | + | chr8.1:77449498-77449517 | MS.gene25041:intron | 20.0% |
!! | AGAATACAAATCAGAAAAAA+TGG | + | chr8.1:77449491-77449510 | MS.gene25041:intron | 20.0% |
!! | ATAATTGTAGATAAAATGAG+AGG | - | chr8.1:77451388-77451407 | None:intergenic | 20.0% |
!! | ATTTAAATTGCTAATCATAG+TGG | + | chr8.1:77448191-77448210 | MS.gene25041:intron | 20.0% |
!! | CAATGCATTTACAAATAAAT+CGG | - | chr8.1:77451332-77451351 | None:intergenic | 20.0% |
!! | GTAAAACTCTATATCAAATT+AGG | - | chr8.1:77450840-77450859 | None:intergenic | 20.0% |
!! | TAATGTATAAAAGAATTGCT+AGG | - | chr8.1:77450987-77451006 | None:intergenic | 20.0% |
!! | TGTAATTACTTTACTGTTTA+TGG | - | chr8.1:77451021-77451040 | None:intergenic | 20.0% |
!!! | AAAACAGTTTTGTTAAATTG+TGG | + | chr8.1:77446901-77446920 | MS.gene25041:intron | 20.0% |
!!! | AACTTTTGATTGAATTATTG+GGG | + | chr8.1:77445969-77445988 | MS.gene25041:intron | 20.0% |
!!! | AATTAGTGGGTTTTTAATTT+TGG | + | chr8.1:77446237-77446256 | MS.gene25041:intron | 20.0% |
!!! | ACTATCATTTCTCTATTTTT+AGG | + | chr8.1:77449058-77449077 | MS.gene25041:intron | 20.0% |
!!! | ATTAGTGGGTTTTTAATTTT+GGG | + | chr8.1:77446238-77446257 | MS.gene25041:intron | 20.0% |
!!! | ATTGATTTGGTTGTTTAATT+TGG | + | chr8.1:77448766-77448785 | MS.gene25041:intron | 20.0% |
!!! | ATTTTTTTGTTGAAATCATG+TGG | + | chr8.1:77450265-77450284 | MS.gene25041:intron | 20.0% |
!!! | CAACTTTTGATTGAATTATT+GGG | + | chr8.1:77445968-77445987 | MS.gene25041:intron | 20.0% |
!!! | CGCAAATCATAATTTAATTT+AGG | + | chr8.1:77449215-77449234 | MS.gene25041:intron | 20.0% |
!!! | GATTGTTATTTTTGGTTTTT+AGG | + | chr8.1:77446018-77446037 | MS.gene25041:intron | 20.0% |
!!! | GCTTTTTCAATTTTTTTATG+TGG | + | chr8.1:77445812-77445831 | MS.gene25041:intron | 20.0% |
!!! | TAAAATCTTTTAAAAGTCAC+TGG | - | chr8.1:77451501-77451520 | None:intergenic | 20.0% |
!!! | TATACCTTGATTGTTATTTT+TGG | + | chr8.1:77446010-77446029 | MS.gene25041:intron | 20.0% |
!!! | TCTCATTTTATCTACAATTA+TGG | + | chr8.1:77451387-77451406 | MS.gene25041:intron | 20.0% |
!!! | TTGTGAAGTATTATGTTTTT+GGG | + | chr8.1:77446693-77446712 | MS.gene25041:intron | 20.0% |
!!! | TTTAATTTTGGGGTTTATAA+GGG | + | chr8.1:77446249-77446268 | MS.gene25041:intron | 20.0% |
!!! | TTTGAACAAACCATTATTTT+CGG | + | chr8.1:77450216-77450235 | MS.gene25041:intron | 20.0% |
!!! | TTTGTGAAGTATTATGTTTT+TGG | + | chr8.1:77446692-77446711 | MS.gene25041:intron | 20.0% |
!!! | TTTTAATTTTGGGGTTTATA+AGG | + | chr8.1:77446248-77446267 | MS.gene25041:intron | 20.0% |
!!! | TTTTTTTTTTTTTCCTGCTT+AGG | + | chr8.1:77446784-77446803 | MS.gene25041:intron | 20.0% |
! | AAAAAAAACACAAAACCTGA+GGG | - | chr8.1:77445564-77445583 | None:intergenic | 25.0% |
! | AAAAAATGGTATATGGTCTA+TGG | + | chr8.1:77449505-77449524 | MS.gene25041:intron | 25.0% |
! | ACTGAAAAACAAGAATCAAA+GGG | - | chr8.1:77445591-77445610 | None:intergenic | 25.0% |
! | AGAGAATACATAAAAGACAA+GGG | + | chr8.1:77447502-77447521 | MS.gene25041:intron | 25.0% |
! | ATGCTTCTGTAATTACATAA+GGG | + | chr8.1:77446106-77446125 | MS.gene25041:intron | 25.0% |
! | ATGTCAATACTGTGTTAAAA+TGG | + | chr8.1:77447772-77447791 | MS.gene25041:intron | 25.0% |
! | ATTAAAACCAATGTTGTCAA+CGG | - | chr8.1:77448599-77448618 | None:intergenic | 25.0% |
! | ATTACTCATTAGATCAGAAA+AGG | + | chr8.1:77449097-77449116 | MS.gene25041:CDS | 25.0% |
! | CCAATAATTCAATCAAAAGT+TGG | - | chr8.1:77445970-77445989 | None:intergenic | 25.0% |
! | GACACAATCTTAATATATAC+AGG | - | chr8.1:77446873-77446892 | None:intergenic | 25.0% |
! | GATTGAAAATGCAATTTAGT+AGG | - | chr8.1:77451677-77451696 | None:intergenic | 25.0% |
! | TAAAAAAAACACAAAACCTG+AGG | - | chr8.1:77445565-77445584 | None:intergenic | 25.0% |
! | TAATCAGTGTTGTCAAATAA+AGG | + | chr8.1:77448412-77448431 | MS.gene25041:intron | 25.0% |
! | TACAAAATATCCTCAAATAG+CGG | + | chr8.1:77450173-77450192 | MS.gene25041:intron | 25.0% |
! | TAGAGAATACATAAAAGACA+AGG | + | chr8.1:77447501-77447520 | MS.gene25041:intron | 25.0% |
! | TAGATAATTTACTGCAACAT+TGG | + | chr8.1:77447943-77447962 | MS.gene25041:intron | 25.0% |
! | TAGCATGTTGTTATATAGAT+TGG | - | chr8.1:77447656-77447675 | None:intergenic | 25.0% |
! | TATAAGAAAACTTTACCAGA+TGG | - | chr8.1:77449187-77449206 | None:intergenic | 25.0% |
! | TGAGATTGTAAAATAAGCAT+TGG | - | chr8.1:77448068-77448087 | None:intergenic | 25.0% |
! | TGTAACTGAAGATCAAATAT+TGG | - | chr8.1:77446747-77446766 | None:intergenic | 25.0% |
!! | CAATTACAATTTTGTTACTG+TGG | - | chr8.1:77448278-77448297 | None:intergenic | 25.0% |
!! | GACTTTTATGTTATGCTAAT+AGG | + | chr8.1:77450494-77450513 | MS.gene25041:intron | 25.0% |
!! | GGTTATAATTCTTCATTTTG+TGG | + | chr8.1:77450747-77450766 | MS.gene25041:intron | 25.0% |
!! | TAATTTGTGAAGACAATAAG+AGG | - | chr8.1:77448625-77448644 | None:intergenic | 25.0% |
!! | TGTAATTACATAAGGGTTTT+GGG | + | chr8.1:77446113-77446132 | MS.gene25041:intron | 25.0% |
!! | TTACAATGGAGTGTTAATAT+AGG | + | chr8.1:77449822-77449841 | MS.gene25041:intron | 25.0% |
!! | TTGTTTCTTATAGTTCTGTA+TGG | + | chr8.1:77448014-77448033 | MS.gene25041:intron | 25.0% |
!!! | AAGCTTTTGATTGAATTAGT+GGG | + | chr8.1:77446224-77446243 | MS.gene25041:intron | 25.0% |
!!! | AATTTTTCTTTAAGAGGCAA+AGG | - | chr8.1:77450720-77450739 | None:intergenic | 25.0% |
!!! | ACTTTTGATTGAATTATTGG+GGG | + | chr8.1:77445970-77445989 | MS.gene25041:intron | 25.0% |
!!! | AGAAGCTTTAAACAAATTAG+AGG | + | chr8.1:77451120-77451139 | MS.gene25041:CDS | 25.0% |
!!! | ATTTTGAATCAGTGTTTTGA+TGG | - | chr8.1:77447037-77447056 | None:intergenic | 25.0% |
!!! | ATTTTTCTTTAAGAGGCAAA+GGG | - | chr8.1:77450719-77450738 | None:intergenic | 25.0% |
!!! | CCAACTTTTGATTGAATTAT+TGG | + | chr8.1:77445967-77445986 | MS.gene25041:intron | 25.0% |
!!! | GAAGCTTTAAACAAATTAGA+GGG | + | chr8.1:77451121-77451140 | MS.gene25041:CDS | 25.0% |
!!! | GATTTTTTGACAACCATATT+AGG | + | chr8.1:77446945-77446964 | MS.gene25041:intron | 25.0% |
!!! | GTATTGACAACTTTGTTTTT+TGG | + | chr8.1:77451435-77451454 | MS.gene25041:intron | 25.0% |
!!! | GTATTTGGTTTTTTATCATC+AGG | + | chr8.1:77447294-77447313 | MS.gene25041:intron | 25.0% |
!!! | TAAGCTTTTGATTGAATTAG+TGG | + | chr8.1:77446223-77446242 | MS.gene25041:intron | 25.0% |
!!! | TAATATTTTGAGCAGTAACA+GGG | - | chr8.1:77445540-77445559 | None:intergenic | 25.0% |
!!! | TCACTTGTTACTTTGAAAAT+CGG | + | chr8.1:77449578-77449597 | MS.gene25041:intron | 25.0% |
!!! | TCGATTATTTGATTTGATGT+AGG | + | chr8.1:77445681-77445700 | MS.gene25041:intron | 25.0% |
!!! | TTAATATTTTGAGCAGTAAC+AGG | - | chr8.1:77445541-77445560 | None:intergenic | 25.0% |
!!! | TTAGTGGGTTTTTAATTTTG+GGG | + | chr8.1:77446239-77446258 | MS.gene25041:intron | 25.0% |
!!! | TTATTTTTGGTTTTTAGGTG+TGG | + | chr8.1:77446023-77446042 | MS.gene25041:intron | 25.0% |
AAAATGTCATTGGCATTACA+AGG | - | chr8.1:77448917-77448936 | None:intergenic | 30.0% | |
AAAGAGTGAAATTTCTTCTC+AGG | - | chr8.1:77450357-77450376 | None:intergenic | 30.0% | |
AAATATTGGTGCAAGTATAG+TGG | - | chr8.1:77446733-77446752 | None:intergenic | 30.0% | |
AACACTAACCTCAATTAAGA+TGG | + | chr8.1:77450776-77450795 | MS.gene25041:intron | 30.0% | |
AATCTTTGTTCTAACATCAC+TGG | + | chr8.1:77450651-77450670 | MS.gene25041:CDS | 30.0% | |
ACAAATATGCGTGTATCATT+GGG | + | chr8.1:77449549-77449568 | MS.gene25041:intron | 30.0% | |
ACAACATAGACCAAAATCAT+TGG | - | chr8.1:77448386-77448405 | None:intergenic | 30.0% | |
ACTATAAGAAACAAACCTCT+CGG | - | chr8.1:77448008-77448027 | None:intergenic | 30.0% | |
ACTGTTCATATTTCCATATC+AGG | + | chr8.1:77448835-77448854 | MS.gene25041:intron | 30.0% | |
AGACTACGACATTGTAAAAA+TGG | - | chr8.1:77448330-77448349 | None:intergenic | 30.0% | |
ATCTGTCAAGAAAATGTCAT+TGG | - | chr8.1:77448927-77448946 | None:intergenic | 30.0% | |
ATGCTTCTGTGATTACATAA+GGG | + | chr8.1:77445857-77445876 | MS.gene25041:intron | 30.0% | |
ATTTATTCATTGTTGGGATG+AGG | - | chr8.1:77451054-77451073 | None:intergenic | 30.0% | |
CAAATTCTGATACACTATAG+TGG | - | chr8.1:77450118-77450137 | None:intergenic | 30.0% | |
CACTGAAAAACAAGAATCAA+AGG | - | chr8.1:77445592-77445611 | None:intergenic | 30.0% | |
CATGTTTGTATGCAAATGTT+TGG | + | chr8.1:77447005-77447024 | MS.gene25041:intron | 30.0% | |
CTGTTCATATTTCCATATCA+GGG | + | chr8.1:77448836-77448855 | MS.gene25041:intron | 30.0% | |
CTTTCATTTATATTGCAGTG+CGG | + | chr8.1:77448667-77448686 | MS.gene25041:intron | 30.0% | |
GAAATTTCACTCTTTCAAGA+AGG | + | chr8.1:77450362-77450381 | MS.gene25041:CDS | 30.0% | |
GAGGGAACAAATTTATAAAG+TGG | + | chr8.1:77450620-77450639 | MS.gene25041:CDS | 30.0% | |
GATGCTTCTGTAATTACATA+AGG | + | chr8.1:77446105-77446124 | MS.gene25041:intron | 30.0% | |
GTTGCTTCATCAAGATAATA+TGG | - | chr8.1:77449678-77449697 | None:intergenic | 30.0% | |
TAAACATGCATATGCACTTT+AGG | + | chr8.1:77446614-77446633 | MS.gene25041:intron | 30.0% | |
TAACCTCAATTAAGATGGTT+TGG | + | chr8.1:77450781-77450800 | MS.gene25041:intron | 30.0% | |
TACTTTACTGTTTATGGTTG+TGG | - | chr8.1:77451015-77451034 | None:intergenic | 30.0% | |
TAGAGAATTGCCGAAAATAA+TGG | - | chr8.1:77450229-77450248 | None:intergenic | 30.0% | |
TATTATCTTGATGAAGCAAC+TGG | + | chr8.1:77449678-77449697 | MS.gene25041:CDS | 30.0% | |
TGAGTAATTGCATCATCATA+TGG | - | chr8.1:77449085-77449104 | None:intergenic | 30.0% | |
TGATGAATTTGATGCTTATG+TGG | + | chr8.1:77445714-77445733 | MS.gene25041:intron | 30.0% | |
TGATTGAAAATGTCTCTGTT+TGG | + | chr8.1:77450527-77450546 | MS.gene25041:intron | 30.0% | |
TGGTTAGATAGTAGTTATAG+TGG | + | chr8.1:77448518-77448537 | MS.gene25041:intron | 30.0% | |
TTCATATCTTCTGCAGTATT+TGG | + | chr8.1:77447279-77447298 | MS.gene25041:intron | 30.0% | |
TTCCAAATTATGCTATGCTT+TGG | - | chr8.1:77449314-77449333 | None:intergenic | 30.0% | |
TTCTCTAGATTCAATGACTT+TGG | - | chr8.1:77447488-77447507 | None:intergenic | 30.0% | |
TTGTAGATAAAATGAGAGGA+TGG | - | chr8.1:77451384-77451403 | None:intergenic | 30.0% | |
TTGTATGCAAAATTGATGTG+TGG | + | chr8.1:77446180-77446199 | MS.gene25041:intron | 30.0% | |
TTGTCAAATAAAGGCTATAG+AGG | + | chr8.1:77448421-77448440 | MS.gene25041:intron | 30.0% | |
! | AAATTATGTTTTTCCCTGTG+TGG | + | chr8.1:77448639-77448658 | MS.gene25041:intron | 30.0% |
! | AATGACATTTTCTTGACAGA+TGG | + | chr8.1:77448926-77448945 | MS.gene25041:CDS | 30.0% |
! | ACTGCAAATACATTTTCCAT+CGG | - | chr8.1:77448239-77448258 | None:intergenic | 30.0% |
! | AGCTATGCTTTTATATTACG+GGG | + | chr8.1:77449607-77449626 | MS.gene25041:intron | 30.0% |
! | AGTGATTTTCTTAAAATGCG+TGG | + | chr8.1:77451633-77451652 | MS.gene25041:intron | 30.0% |
! | ATTTTGCAAGAAAGAAGGTT+TGG | + | chr8.1:77449954-77449973 | MS.gene25041:CDS | 30.0% |
! | CTGATTTGTATTCTTGAAGA+TGG | - | chr8.1:77449485-77449504 | None:intergenic | 30.0% |
! | CTGTAATTACATAAGGGTTT+TGG | + | chr8.1:77446112-77446131 | MS.gene25041:intron | 30.0% |
! | GAGCTATGCTTTTATATTAC+GGG | + | chr8.1:77449606-77449625 | MS.gene25041:intron | 30.0% |
! | GCTTTTGTTACCAATGATTT+TGG | + | chr8.1:77448373-77448392 | MS.gene25041:intron | 30.0% |
! | GGAGCTATGCTTTTATATTA+CGG | + | chr8.1:77449605-77449624 | MS.gene25041:intron | 30.0% |
! | GTAGAATTTTGCAAGAAAGA+AGG | + | chr8.1:77449949-77449968 | MS.gene25041:CDS | 30.0% |
! | TCGAACTTTCAGTTTTTGAT+TGG | + | chr8.1:77446060-77446079 | MS.gene25041:intron | 30.0% |
! | TGTAGTTTTTGCTAAAACTG+CGG | + | chr8.1:77446554-77446573 | MS.gene25041:intron | 30.0% |
! | TTCAAAATTTTGTCCTGACT+TGG | + | chr8.1:77447049-77447068 | MS.gene25041:intron | 30.0% |
! | TTGTACTAAAAAGCATATCG+TGG | - | chr8.1:77448494-77448513 | None:intergenic | 30.0% |
!! | AATATACAACTAGAAGCATC+TGG | + | chr8.1:77447744-77447763 | MS.gene25041:intron | 30.0% |
!! | ATGCTTTTTAGTACAAAGTG+TGG | + | chr8.1:77448498-77448517 | MS.gene25041:intron | 30.0% |
!! | CGAACTTTCAGTTTTTGATT+GGG | + | chr8.1:77446061-77446080 | MS.gene25041:intron | 30.0% |
!! | GAACTTTCAGTTTTTGATTG+GGG | + | chr8.1:77446062-77446081 | MS.gene25041:intron | 30.0% |
!! | TTTTTGCTTTGGTTTCTGTT+TGG | + | chr8.1:77446322-77446341 | MS.gene25041:intron | 30.0% |
!!! | CTGATCTTTTGTTTTTGCTT+TGG | + | chr8.1:77446311-77446330 | MS.gene25041:intron | 30.0% |
!!! | CTTTGATTCTTGTTTTTCAG+TGG | + | chr8.1:77445590-77445609 | MS.gene25041:intron | 30.0% |
!!! | TTACATAAGGGTTTTGGATT+TGG | + | chr8.1:77445869-77445888 | MS.gene25041:intron | 30.0% |
!!! | TTGGTTTTTTATCATCAGGA+TGG | + | chr8.1:77447298-77447317 | MS.gene25041:intron | 30.0% |
AAGTAAGCGTTTGCAATAGA+AGG | - | chr8.1:77451251-77451270 | None:intergenic | 35.0% | |
AATACCAGTGTTGTGAATTG+CGG | - | chr8.1:77449445-77449464 | None:intergenic | 35.0% | |
ACCTCTCGGAAAAAAGTAAT+TGG | - | chr8.1:77447994-77448013 | None:intergenic | 35.0% | |
AGACATACTTTAGTCTCACT+CGG | + | chr8.1:77450074-77450093 | MS.gene25041:intron | 35.0% | |
AGAGTTCCATCAAAAGTTCA+TGG | + | chr8.1:77451824-77451843 | MS.gene25041:CDS | 35.0% | |
ATAGCTAAAAACACTTGCCA+CGG | + | chr8.1:77447089-77447108 | MS.gene25041:intron | 35.0% | |
ATGCTATAAAGCTCCTGATA+GGG | + | chr8.1:77447342-77447361 | MS.gene25041:intron | 35.0% | |
ATTATAATGATGTGCGACTG+AGG | + | chr8.1:77446281-77446300 | MS.gene25041:intron | 35.0% | |
ATTCTGATACACTATAGTGG+CGG | - | chr8.1:77450115-77450134 | None:intergenic | 35.0% | |
ATTGAAGACAAAGAACGAAG+GGG | - | chr8.1:77445499-77445518 | None:intergenic | 35.0% | |
CAAATTGCAAACATACAGCT+GGG | - | chr8.1:77448958-77448977 | None:intergenic | 35.0% | |
CAACACTGGTATTTAGTAGT+AGG | + | chr8.1:77449452-77449471 | MS.gene25041:intron | 35.0% | |
CAATGAGTTCAGCAAAATCA+CGG | - | chr8.1:77446587-77446606 | None:intergenic | 35.0% | |
CATATTAGGCAATCTGTGAA+GGG | + | chr8.1:77446959-77446978 | MS.gene25041:intron | 35.0% | |
CATTGAAGACAAAGAACGAA+GGG | - | chr8.1:77445500-77445519 | None:intergenic | 35.0% | |
CCATATTACCTCAAGAAGAT+AGG | + | chr8.1:77451775-77451794 | MS.gene25041:CDS | 35.0% | |
CCTATCTTCTTGAGGTAATA+TGG | - | chr8.1:77451778-77451797 | None:intergenic | 35.0% | |
CGCACAAAAACAAAGCAAAA+AGG | - | chr8.1:77446405-77446424 | None:intergenic | 35.0% | |
CGCACTGCAATATAAATGAA+AGG | - | chr8.1:77448669-77448688 | None:intergenic | 35.0% | |
CTCATTAGATCAGAAAAGGA+TGG | + | chr8.1:77449101-77449120 | MS.gene25041:CDS | 35.0% | |
GACAAATATGCGTGTATCAT+TGG | + | chr8.1:77449548-77449567 | MS.gene25041:intron | 35.0% | |
GATGCTTCTGTGATTACATA+AGG | + | chr8.1:77445856-77445875 | MS.gene25041:intron | 35.0% | |
GTGCATATGCATGTTTAGAT+AGG | - | chr8.1:77446611-77446630 | None:intergenic | 35.0% | |
GTTCCAAACCATCTTAATTG+AGG | - | chr8.1:77450787-77450806 | None:intergenic | 35.0% | |
GTTTGCATGCAAAATTGATG+TGG | + | chr8.1:77445930-77445949 | MS.gene25041:intron | 35.0% | |
TAATTGAGGCTGAATAGAGA+GGG | - | chr8.1:77449151-77449170 | None:intergenic | 35.0% | |
TCCGAACAAAAACAAGTGAA+CGG | - | chr8.1:77445447-77445466 | None:intergenic | 35.0% | |
TGCCAAAGCATAGCATAATT+TGG | + | chr8.1:77449309-77449328 | MS.gene25041:intron | 35.0% | |
TGCTCAAAATATTAACCCTC+AGG | + | chr8.1:77445546-77445565 | MS.gene25041:CDS | 35.0% | |
TGGACTGTGTCCATAAAATA+AGG | - | chr8.1:77447412-77447431 | None:intergenic | 35.0% | |
TTAGCAGTGTTGTCAAATGA+TGG | + | chr8.1:77449269-77449288 | MS.gene25041:intron | 35.0% | |
TTATTGTCTTTCAAGGTTCC+CGG | + | chr8.1:77451732-77451751 | MS.gene25041:intron | 35.0% | |
TTCTTGCTGAGGAAAATCAA+CGG | + | chr8.1:77449920-77449939 | MS.gene25041:CDS | 35.0% | |
TTGCAAGTTCTGCAACATTA+AGG | - | chr8.1:77447199-77447218 | None:intergenic | 35.0% | |
TTGGACAAAAGTGAAACACA+GGG | + | chr8.1:77448128-77448147 | MS.gene25041:CDS | 35.0% | |
TTGTCAAATGATGGCTATAG+CGG | + | chr8.1:77449278-77449297 | MS.gene25041:intron | 35.0% | |
TTGTGGCAAAAGACATGTTA+TGG | + | chr8.1:77446448-77446467 | MS.gene25041:intron | 35.0% | |
TTTGGACAAAAGTGAAACAC+AGG | + | chr8.1:77448127-77448146 | MS.gene25041:CDS | 35.0% | |
! | AAAAGCATATCGTGGAACAA+TGG | - | chr8.1:77448486-77448505 | None:intergenic | 35.0% |
! | AAATTTGTTCCCTCACATCT+GGG | - | chr8.1:77450614-77450633 | None:intergenic | 35.0% |
! | ACTCATCCATGAACTTTTGA+TGG | - | chr8.1:77451833-77451852 | None:intergenic | 35.0% |
! | AGAGACATTTTCAATCAGTG+TGG | - | chr8.1:77450524-77450543 | None:intergenic | 35.0% |
! | ATTGGGGTTTTTGATCATGA+TGG | + | chr8.1:77446078-77446097 | MS.gene25041:intron | 35.0% |
! | ATTTCCATATCAGGGTATTC+AGG | + | chr8.1:77448844-77448863 | MS.gene25041:intron | 35.0% |
! | CAATGGAGTGTTAATATAGG+AGG | + | chr8.1:77449825-77449844 | MS.gene25041:intron | 35.0% |
! | CTGCACGAAATTCATTTTGT+AGG | + | chr8.1:77450308-77450327 | MS.gene25041:intron | 35.0% |
! | CTGTGATTACATAAGGGTTT+TGG | + | chr8.1:77445863-77445882 | MS.gene25041:intron | 35.0% |
! | GCTTAGTGTATGTTTGAGTT+CGG | + | chr8.1:77446507-77446526 | MS.gene25041:intron | 35.0% |
! | GTTACTTTGAAAATCGGAGT+TGG | + | chr8.1:77449584-77449603 | MS.gene25041:intron | 35.0% |
! | TAAATTTGTTCCCTCACATC+TGG | - | chr8.1:77450615-77450634 | None:intergenic | 35.0% |
! | TCATCAGGATGGCTTTTAAA+AGG | + | chr8.1:77447309-77447328 | MS.gene25041:intron | 35.0% |
! | TGCTTTTATATTACGGGGAT+TGG | + | chr8.1:77449612-77449631 | MS.gene25041:intron | 35.0% |
! | TTTCCATATCAGGGTATTCA+GGG | + | chr8.1:77448845-77448864 | MS.gene25041:intron | 35.0% |
!! | AATCTTAGTAGTTTTGCCGA+TGG | + | chr8.1:77448220-77448239 | MS.gene25041:intron | 35.0% |
!! | ACTCTTTCAAGAAGGTATCT+CGG | + | chr8.1:77450370-77450389 | MS.gene25041:CDS | 35.0% |
!! | GTTTTGTTAAATTGTGGCCT+TGG | + | chr8.1:77446907-77446926 | MS.gene25041:intron | 35.0% |
!! | TCATTATACCGACTTACCTT+TGG | - | chr8.1:77450448-77450467 | None:intergenic | 35.0% |
!! | TGCGTGGATTATCTTGATTT+TGG | + | chr8.1:77451649-77451668 | MS.gene25041:intron | 35.0% |
!!! | ACCGTTCACTTGTTTTTGTT+CGG | + | chr8.1:77445443-77445462 | MS.gene25041:CDS | 35.0% |
!!! | GAAAGAAGGTTTGGTTCTTT+TGG | + | chr8.1:77449963-77449982 | MS.gene25041:CDS | 35.0% |
!!! | TAGTAGGCAGCCTTATTTTA+TGG | + | chr8.1:77447399-77447418 | MS.gene25041:intron | 35.0% |
AAAACCAATGTTGTCAACGG+TGG | - | chr8.1:77448596-77448615 | None:intergenic | 40.0% | |
AAACCCTGAATACCCTGATA+TGG | - | chr8.1:77448851-77448870 | None:intergenic | 40.0% | |
AAACGAATGAGCATCTGGAT+TGG | - | chr8.1:77447235-77447254 | None:intergenic | 40.0% | |
AAACGCTTACTTAATGCCAC+TGG | + | chr8.1:77451259-77451278 | MS.gene25041:CDS | 40.0% | |
AAATGAAAGGTCAACCACAC+AGG | - | chr8.1:77448656-77448675 | None:intergenic | 40.0% | |
AAATGTCAGTATGCTGTTCG+AGG | + | chr8.1:77446812-77446831 | MS.gene25041:CDS | 40.0% | |
AATGAAAGGTCAACCACACA+GGG | - | chr8.1:77448655-77448674 | None:intergenic | 40.0% | |
AATGGCGTGCTTCTATCTTT+CGG | + | chr8.1:77447790-77447809 | MS.gene25041:intron | 40.0% | |
ACCGTCCAGTGAATAGTAAA+GGG | - | chr8.1:77448808-77448827 | None:intergenic | 40.0% | |
ACCTCAAGAAGATAGGATTC+CGG | + | chr8.1:77451782-77451801 | MS.gene25041:CDS | 40.0% | |
AGAGATTGTTACACTTGCTC+AGG | + | chr8.1:77446835-77446854 | MS.gene25041:CDS | 40.0% | |
AGATGCTCATTCGTTTGATG+AGG | + | chr8.1:77447239-77447258 | MS.gene25041:CDS | 40.0% | |
AGGAACAACAACAATTCCAG+TGG | - | chr8.1:77451278-77451297 | None:intergenic | 40.0% | |
AGGTGAGCTGCAAATTACAA+TGG | + | chr8.1:77449808-77449827 | MS.gene25041:intron | 40.0% | |
AGTCACATAAAGCAAGAACC+TGG | - | chr8.1:77448097-77448116 | None:intergenic | 40.0% | |
ATCTGAACTCAAGAAGCAGT+TGG | + | chr8.1:77449716-77449735 | MS.gene25041:CDS | 40.0% | |
ATGCAGCAGGTTCATTTCAT+TGG | - | chr8.1:77447835-77447854 | None:intergenic | 40.0% | |
ATTGATGTGGCTGTTGATCA+AGG | + | chr8.1:77445943-77445962 | MS.gene25041:intron | 40.0% | |
ATTGCCCCTTTACTATTCAC+TGG | + | chr8.1:77448800-77448819 | MS.gene25041:intron | 40.0% | |
ATTGGAAATCCTCAGTCTCT+GGG | + | chr8.1:77447961-77447980 | MS.gene25041:CDS | 40.0% | |
CAAAAGATTCGTTGATCCCA+TGG | - | chr8.1:77446431-77446450 | None:intergenic | 40.0% | |
CAAATTGTGGATCAGATTCC+TGG | + | chr8.1:77448710-77448729 | MS.gene25041:CDS | 40.0% | |
CAATACCTGACTGTGACTAT+AGG | - | chr8.1:77448750-77448769 | None:intergenic | 40.0% | |
CCATATTAGGCAATCTGTGA+AGG | + | chr8.1:77446958-77446977 | MS.gene25041:intron | 40.0% | |
CCATTGAAGACAAAGAACGA+AGG | - | chr8.1:77445501-77445520 | None:intergenic | 40.0% | |
CCTTCACAGATTGCCTAATA+TGG | - | chr8.1:77446961-77446980 | None:intergenic | 40.0% | |
CCTTCGTTCTTTGTCTTCAA+TGG | + | chr8.1:77445498-77445517 | MS.gene25041:CDS | 40.0% | |
CTGAAGAAAATCTATGCAGC+AGG | - | chr8.1:77447848-77447867 | None:intergenic | 40.0% | |
GAACTTGCAAAAAGCTTTGC+AGG | + | chr8.1:77447209-77447228 | MS.gene25041:intron | 40.0% | |
GAGCAATGTATCTGTTTCCT+CGG | + | chr8.1:77451167-77451186 | MS.gene25041:CDS | 40.0% | |
GATGCTATAAAGCTCCTGAT+AGG | + | chr8.1:77447341-77447360 | MS.gene25041:intron | 40.0% | |
GCAAATTGCAAACATACAGC+TGG | - | chr8.1:77448959-77448978 | None:intergenic | 40.0% | |
GCTTTAGCTGTTATAAACCC+AGG | + | chr8.1:77449771-77449790 | MS.gene25041:CDS | 40.0% | |
GGAAAAAAGTAATTGGCTGC+TGG | - | chr8.1:77447987-77448006 | None:intergenic | 40.0% | |
GGAATTTCTGTCATGTCTGT+AGG | + | chr8.1:77449897-77449916 | MS.gene25041:intron | 40.0% | |
GTAATTGAGGCTGAATAGAG+AGG | - | chr8.1:77449152-77449171 | None:intergenic | 40.0% | |
GTTGTCATGACATATCCTAG+AGG | - | chr8.1:77447452-77447471 | None:intergenic | 40.0% | |
TATTCATTGTTGGGATGAGG+TGG | - | chr8.1:77451051-77451070 | None:intergenic | 40.0% | |
TCATCAAACGAATGAGCATC+TGG | - | chr8.1:77447240-77447259 | None:intergenic | 40.0% | |
TCTATAACACTGTAGCGTTG+CGG | + | chr8.1:77448542-77448561 | MS.gene25041:intron | 40.0% | |
TCTATGAAATGTGCCAAGTC+AGG | - | chr8.1:77447065-77447084 | None:intergenic | 40.0% | |
TCTTGCTGAGGAAAATCAAC+GGG | + | chr8.1:77449921-77449940 | MS.gene25041:CDS | 40.0% | |
TGACATTTCAGAACCTAAGC+AGG | - | chr8.1:77446800-77446819 | None:intergenic | 40.0% | |
TGCAAAATTGATGTGTGGTG+TGG | + | chr8.1:77446185-77446204 | MS.gene25041:intron | 40.0% | |
TGCATACAAACATGCCATTG+CGG | - | chr8.1:77446999-77447018 | None:intergenic | 40.0% | |
TGGTGTGGTTGTTGATCAAA+GGG | + | chr8.1:77446200-77446219 | MS.gene25041:intron | 40.0% | |
TTGATGTGGCTGTTGATCAA+GGG | + | chr8.1:77445944-77445963 | MS.gene25041:intron | 40.0% | |
TTGTCATTGAGTGAATACCG+TGG | + | chr8.1:77450868-77450887 | MS.gene25041:intron | 40.0% | |
TTTACAATCTCATCTCTGCC+AGG | + | chr8.1:77448076-77448095 | MS.gene25041:intron | 40.0% | |
TTTGATCATGAGTCCTCCTA+AGG | + | chr8.1:77450689-77450708 | MS.gene25041:CDS | 40.0% | |
TTTGATGGAACTCTGTCAAG+CGG | - | chr8.1:77451818-77451837 | None:intergenic | 40.0% | |
! | AAATGTCTCTGTTTGGCTTC+AGG | + | chr8.1:77450534-77450553 | MS.gene25041:intron | 40.0% |
! | AACAATAGTGCCGCTATTTG+AGG | - | chr8.1:77450186-77450205 | None:intergenic | 40.0% |
! | AATTTGTTCCCTCACATCTG+GGG | - | chr8.1:77450613-77450632 | None:intergenic | 40.0% |
! | ACTGGAATTGTTGTTGTTCC+TGG | + | chr8.1:77451277-77451296 | MS.gene25041:CDS | 40.0% |
! | AGTTTTTGCTAAAACTGCGG+TGG | + | chr8.1:77446557-77446576 | MS.gene25041:intron | 40.0% |
! | ATGTGACTATCCAGCTCTTT+TGG | + | chr8.1:77448109-77448128 | MS.gene25041:CDS | 40.0% |
! | ATTGTTGTTGTTCCTGGTTC+TGG | + | chr8.1:77451283-77451302 | MS.gene25041:CDS | 40.0% |
! | CGAGTCTTATGAGTCATTCA+TGG | + | chr8.1:77450909-77450928 | MS.gene25041:CDS | 40.0% |
! | CGTGATTTTGCTGAACTCAT+TGG | + | chr8.1:77446585-77446604 | MS.gene25041:intron | 40.0% |
! | GTTTGAGTTCGGTGAAATCA+CGG | + | chr8.1:77446518-77446537 | MS.gene25041:intron | 40.0% |
! | TGGGATCAACGAATCTTTTG+TGG | + | chr8.1:77446431-77446450 | MS.gene25041:intron | 40.0% |
! | TTTTGAGCAGTAACAGGGAA+AGG | - | chr8.1:77445535-77445554 | None:intergenic | 40.0% |
!! | ATATTCTACTCAAAGCACCG+TGG | - | chr8.1:77447109-77447128 | None:intergenic | 40.0% |
!! | GTCACAGTCAGGTATTGATT+TGG | + | chr8.1:77448753-77448772 | MS.gene25041:intron | 40.0% |
!! | TAAAGGCTATAGAGGTGCTA+CGG | + | chr8.1:77448429-77448448 | MS.gene25041:intron | 40.0% |
!! | TCACTTTTGTCCAAAAGAGC+TGG | - | chr8.1:77448122-77448141 | None:intergenic | 40.0% |
!! | TCTCTGTGTTGGCTTATAGT+AGG | + | chr8.1:77447383-77447402 | MS.gene25041:intron | 40.0% |
!!! | GCCAATTACTTTTTTCCGAG+AGG | + | chr8.1:77447990-77448009 | MS.gene25041:CDS | 40.0% |
!!! | TTGTTTTTGTGCGCTACCAT+GGG | + | chr8.1:77446412-77446431 | MS.gene25041:intron | 40.0% |
!!! | TTTGGTTCTTTTGGCTGATG+AGG | + | chr8.1:77449972-77449991 | MS.gene25041:CDS | 40.0% |
!!! | TTTGTTTTTGTGCGCTACCA+TGG | + | chr8.1:77446411-77446430 | MS.gene25041:intron | 40.0% |
AAACATGCCATTGCGGTCTA+TGG | - | chr8.1:77446992-77447011 | None:intergenic | 45.0% | |
AAAGCGAGGAGGTTATATGG+AGG | + | chr8.1:77450575-77450594 | MS.gene25041:CDS | 45.0% | |
AAAGCTCCTGATAGGGTCAT+TGG | + | chr8.1:77447349-77447368 | MS.gene25041:intron | 45.0% | |
AAAGGCTATCAAAGCTGCAG+AGG | + | chr8.1:77451204-77451223 | MS.gene25041:CDS | 45.0% | |
AACCTTTGCACGCGTAGTAA+GGG | - | chr8.1:77450959-77450978 | None:intergenic | 45.0% | |
AGAGAGAGCTTGGCAAATTG+TGG | + | chr8.1:77448697-77448716 | MS.gene25041:CDS | 45.0% | |
AGAGGCAAAGGGTTAACCTT+AGG | - | chr8.1:77450708-77450727 | None:intergenic | 45.0% | |
AGCGGCACTATTGTTTACAG+CGG | + | chr8.1:77450191-77450210 | MS.gene25041:intron | 45.0% | |
AGTGCTATAGTTCCGCAGTT+TGG | + | chr8.1:77449353-77449372 | MS.gene25041:intron | 45.0% | |
ATAAACCCAGGCAATCCAAC+AGG | + | chr8.1:77449783-77449802 | MS.gene25041:CDS | 45.0% | |
ATGGATGAGTTTCGCGATTG+AGG | + | chr8.1:77451843-77451862 | MS.gene25041:CDS | 45.0% | |
ATGGCGTGCTTCTATCTTTC+GGG | + | chr8.1:77447791-77447810 | MS.gene25041:intron | 45.0% | |
ATGTCTGTAGGTTCTTGCTG+AGG | + | chr8.1:77449909-77449928 | MS.gene25041:intron | 45.0% | |
ATGTTGTCAACGGTGGATCA+CGG | - | chr8.1:77448589-77448608 | None:intergenic | 45.0% | |
CAATCCGCAATTCACAACAC+TGG | + | chr8.1:77449438-77449457 | MS.gene25041:intron | 45.0% | |
CATTGGAAATCCTCAGTCTC+TGG | + | chr8.1:77447960-77447979 | MS.gene25041:CDS | 45.0% | |
CCCCTTTACTATTCACTGGA+CGG | + | chr8.1:77448804-77448823 | MS.gene25041:intron | 45.0% | |
CCGTCCAGTGAATAGTAAAG+GGG | - | chr8.1:77448807-77448826 | None:intergenic | 45.0% | |
CGGATTCAATAGAGAGAGCT+TGG | + | chr8.1:77448687-77448706 | MS.gene25041:CDS | 45.0% | |
CTACACTCAGTACCAAACTG+CGG | - | chr8.1:77449368-77449387 | None:intergenic | 45.0% | |
GACCGTCCAGTGAATAGTAA+AGG | - | chr8.1:77448809-77448828 | None:intergenic | 45.0% | |
GAGAAGGATGGTGATACTGT+TGG | - | chr8.1:77445477-77445496 | None:intergenic | 45.0% | |
GAGGTTATATGGAGGTGACT+GGG | + | chr8.1:77450583-77450602 | MS.gene25041:CDS | 45.0% | |
GAGTCATTCATGGCTGAGAA+GGG | + | chr8.1:77450919-77450938 | MS.gene25041:CDS | 45.0% | |
GTAACCTGCAACAAAGCAGA+AGG | + | chr8.1:77451145-77451164 | MS.gene25041:CDS | 45.0% | |
GTGGTGTGGTTGTTGATCAA+AGG | + | chr8.1:77446199-77446218 | MS.gene25041:intron | 45.0% | |
TAAACCCAGGCAATCCAACA+GGG | + | chr8.1:77449784-77449803 | MS.gene25041:CDS | 45.0% | |
TAACCTTTGCACGCGTAGTA+AGG | - | chr8.1:77450960-77450979 | None:intergenic | 45.0% | |
TCCTGATAGGGTCATTGGAA+GGG | + | chr8.1:77447354-77447373 | MS.gene25041:intron | 45.0% | |
TCTGTTTGGTTGTGTGACTG+AGG | + | chr8.1:77446336-77446355 | MS.gene25041:intron | 45.0% | |
TGAATACCGTGGATCTTTGC+AGG | + | chr8.1:77450879-77450898 | MS.gene25041:intron | 45.0% | |
TGAGTCATTCATGGCTGAGA+AGG | + | chr8.1:77450918-77450937 | MS.gene25041:CDS | 45.0% | |
TGATCCACCGTTGACAACAT+TGG | + | chr8.1:77448589-77448608 | MS.gene25041:intron | 45.0% | |
TGGAAAGCGAGGAGGTTATA+TGG | + | chr8.1:77450572-77450591 | MS.gene25041:CDS | 45.0% | |
TGGATGAGTTTCGCGATTGA+GGG | + | chr8.1:77451844-77451863 | MS.gene25041:CDS | 45.0% | |
TTGATGGAACTCTGTCAAGC+GGG | - | chr8.1:77451817-77451836 | None:intergenic | 45.0% | |
TTGGAAGATGCCAAGTCCAA+GGG | + | chr8.1:77449735-77449754 | MS.gene25041:CDS | 45.0% | |
! | AAATTGTGGCCTTGGCAGAA+TGG | + | chr8.1:77446915-77446934 | MS.gene25041:intron | 45.0% |
! | ACGCTGAAGTACTAAGAAGG+AGG | + | chr8.1:77450805-77450824 | MS.gene25041:intron | 45.0% |
! | GGAACGCTGAAGTACTAAGA+AGG | + | chr8.1:77450802-77450821 | MS.gene25041:intron | 45.0% |
! | GTGAAACACAGGGTTTGTTC+AGG | + | chr8.1:77448138-77448157 | MS.gene25041:CDS | 45.0% |
! | GTGTTGTGAATTGCGGATTG+TGG | - | chr8.1:77449438-77449457 | None:intergenic | 45.0% |
! | TCTTTTCAGTCCGTCTCCAA+AGG | + | chr8.1:77450429-77450448 | MS.gene25041:CDS | 45.0% |
! | TGTTTGGCTTCAGGCTATCA+CGG | + | chr8.1:77450543-77450562 | MS.gene25041:intron | 45.0% |
!! | AAGAAGGTATCTCGGTCCAT+GGG | + | chr8.1:77450378-77450397 | MS.gene25041:CDS | 45.0% |
!! | CGTTTGCAATAGAAGGCATC+AGG | - | chr8.1:77451244-77451263 | None:intergenic | 45.0% |
!! | CTGAATAGAGAGGGTACTGA+GGG | - | chr8.1:77449142-77449161 | None:intergenic | 45.0% |
!! | CTTTGATAGCCTTTTCAGGC+AGG | - | chr8.1:77451198-77451217 | None:intergenic | 45.0% |
!! | GCAGCTTTGATAGCCTTTTC+AGG | - | chr8.1:77451202-77451221 | None:intergenic | 45.0% |
!! | TACCGACTTACCTTTGGAGA+CGG | - | chr8.1:77450442-77450461 | None:intergenic | 45.0% |
!!! | GTTGTTCCTGGTTCTGGTTT+TGG | + | chr8.1:77451289-77451308 | MS.gene25041:CDS | 45.0% |
!! | ATATAATTTATCATAATTAT+CGG | - | chr8.1:77451549-77451568 | None:intergenic | 5.0% |
AACACTGATGCCCTTGGACT+TGG | - | chr8.1:77449748-77449767 | None:intergenic | 50.0% | |
AAGAACGAAGGGGAGAAGGA+TGG | - | chr8.1:77445489-77445508 | None:intergenic | 50.0% | |
AAGGGTTGGACTCTCTGTGT+TGG | + | chr8.1:77447372-77447391 | MS.gene25041:intron | 50.0% | |
AATCCGCTGCAGACAGATTC+AGG | + | chr8.1:77445410-77445429 | MS.gene25041:CDS | 50.0% | |
ACCCTTCCAATGACCCTATC+AGG | - | chr8.1:77447358-77447377 | None:intergenic | 50.0% | |
ACCTGTCCAAAACCAGAACC+AGG | - | chr8.1:77451298-77451317 | None:intergenic | 50.0% | |
ACTTTACCAGATGGCCACCA+TGG | - | chr8.1:77449178-77449197 | None:intergenic | 50.0% | |
ATCATTGTCGCCGTATCCCA+TGG | - | chr8.1:77450397-77450416 | None:intergenic | 50.0% | |
ATGCCTGAATCTGTCTGCAG+CGG | - | chr8.1:77445416-77445435 | None:intergenic | 50.0% | |
CACCTAAAATGCCATGTGCC+GGG | - | chr8.1:77451753-77451772 | None:intergenic | 50.0% | |
CAGATTCCTGGAAGAGCAAC+TGG | + | chr8.1:77448722-77448741 | MS.gene25041:CDS | 50.0% | |
CTCCAACCTGCAAAGATCCA+CGG | - | chr8.1:77450888-77450907 | None:intergenic | 50.0% | |
CTCCTGATAGGGTCATTGGA+AGG | + | chr8.1:77447353-77447372 | MS.gene25041:intron | 50.0% | |
GACAAAGAACGAAGGGGAGA+AGG | - | chr8.1:77445493-77445512 | None:intergenic | 50.0% | |
GATAGGGTCATTGGAAGGGT+TGG | + | chr8.1:77447358-77447377 | MS.gene25041:intron | 50.0% | |
GCACCTAAAATGCCATGTGC+CGG | - | chr8.1:77451754-77451773 | None:intergenic | 50.0% | |
GCCGGAATCCTATCTTCTTG+AGG | - | chr8.1:77451786-77451805 | None:intergenic | 50.0% | |
GGAGGTTATATGGAGGTGAC+TGG | + | chr8.1:77450582-77450601 | MS.gene25041:CDS | 50.0% | |
GGCAAAGGGTTAACCTTAGG+AGG | - | chr8.1:77450705-77450724 | None:intergenic | 50.0% | |
GTATCTCGGTCCATGGGATA+CGG | + | chr8.1:77450384-77450403 | MS.gene25041:CDS | 50.0% | |
GTCCGTCTCCAAAGGTAAGT+CGG | + | chr8.1:77450437-77450456 | MS.gene25041:intron | 50.0% | |
GTTGGAAGATGCCAAGTCCA+AGG | + | chr8.1:77449734-77449753 | MS.gene25041:CDS | 50.0% | |
TACCGTGGATCTTTGCAGGT+TGG | + | chr8.1:77450883-77450902 | MS.gene25041:intron | 50.0% | |
TCAGCCTCAATTACCCTCCA+TGG | + | chr8.1:77449158-77449177 | MS.gene25041:CDS | 50.0% | |
TGCAATAGCCGCTGGAATTG+AGG | + | chr8.1:77448877-77448896 | MS.gene25041:CDS | 50.0% | |
TGGTGCCTATAGTCACAGTC+AGG | + | chr8.1:77448742-77448761 | MS.gene25041:CDS | 50.0% | |
TTACGTGATGCAATAGCCGC+TGG | + | chr8.1:77448869-77448888 | MS.gene25041:CDS | 50.0% | |
TTCCCTTACTACGCGTGCAA+AGG | + | chr8.1:77450954-77450973 | MS.gene25041:CDS | 50.0% | |
! | GGACACAGTCCAAAAGTGTG+AGG | + | chr8.1:77447420-77447439 | MS.gene25041:intron | 50.0% |
! | GTTTGGCTTCAGGCTATCAC+GGG | + | chr8.1:77450544-77450563 | MS.gene25041:intron | 50.0% |
! | TGCTCCTTCTGCTTTGTTGC+AGG | - | chr8.1:77451152-77451171 | None:intergenic | 50.0% |
! | TGGGTTTTCCCCAGATGTGA+GGG | + | chr8.1:77450602-77450621 | MS.gene25041:CDS | 50.0% |
! | TTCCCGGCACATGGCATTTT+AGG | + | chr8.1:77451748-77451767 | MS.gene25041:CDS | 50.0% |
! | TTTGGCTTCAGGCTATCACG+GGG | + | chr8.1:77450545-77450564 | MS.gene25041:intron | 50.0% |
!! | AGTCCAAGGGCATCAGTGTT+AGG | + | chr8.1:77449748-77449767 | MS.gene25041:CDS | 50.0% |
!! | ATAGAGAGGGTACTGAGGGA+TGG | - | chr8.1:77449138-77449157 | None:intergenic | 50.0% |
!! | CAAGAAGGTATCTCGGTCCA+TGG | + | chr8.1:77450377-77450396 | MS.gene25041:CDS | 50.0% |
!! | GCAATAGAAGGCATCAGGTG+CGG | - | chr8.1:77451239-77451258 | None:intergenic | 50.0% |
!! | GCTGAATAGAGAGGGTACTG+AGG | - | chr8.1:77449143-77449162 | None:intergenic | 50.0% |
!! | GTCCAAGGGCATCAGTGTTA+GGG | + | chr8.1:77449749-77449768 | MS.gene25041:CDS | 50.0% |
!! | TAGAGAGGGTACTGAGGGAT+GGG | - | chr8.1:77449137-77449156 | None:intergenic | 50.0% |
!!! | TCCTGGTTCTGGTTTTGGAC+AGG | + | chr8.1:77451294-77451313 | MS.gene25041:CDS | 50.0% |
AGCCCTAACACTGATGCCCT+TGG | - | chr8.1:77449754-77449773 | None:intergenic | 55.0% | |
ATCGCGCTCCTCAATTCCAG+CGG | - | chr8.1:77448888-77448907 | None:intergenic | 55.0% | |
ATGCCATTGCGGTCTATGGC+AGG | - | chr8.1:77446988-77447007 | None:intergenic | 55.0% | |
ATGCCTGCCATAGACCGCAA+TGG | + | chr8.1:77446982-77447001 | MS.gene25041:intron | 55.0% | |
CACACATTCAGCGCGTCACA+CGG | + | chr8.1:77447526-77447545 | MS.gene25041:intron | 55.0% | |
CTCTGTCAAGCGGGTGACAA+TGG | - | chr8.1:77451808-77451827 | None:intergenic | 55.0% | |
CTTTCAAGGTTCCCGGCACA+TGG | + | chr8.1:77451739-77451758 | MS.gene25041:intron | 55.0% | |
GCCACCATGGAGGGTAATTG+AGG | - | chr8.1:77449165-77449184 | None:intergenic | 55.0% | |
GCCTCAATTACCCTCCATGG+TGG | + | chr8.1:77449161-77449180 | MS.gene25041:CDS | 55.0% | |
GCTACGGCTCTCTAGTGTAG+TGG | + | chr8.1:77448445-77448464 | MS.gene25041:intron | 55.0% | |
TACCAGATGGCCACCATGGA+GGG | - | chr8.1:77449174-77449193 | None:intergenic | 55.0% | |
TAGGCACCAGTTGCTCTTCC+AGG | - | chr8.1:77448731-77448750 | None:intergenic | 55.0% | |
TCCGCAACACCATTCTGCCA+AGG | - | chr8.1:77446927-77446946 | None:intergenic | 55.0% | |
TCGGATTCGCCTGCCTGAAA+AGG | + | chr8.1:77451186-77451205 | MS.gene25041:CDS | 55.0% | |
TTACCAGATGGCCACCATGG+AGG | - | chr8.1:77449175-77449194 | None:intergenic | 55.0% | |
! | AGGTCGCAGCCTCACACTTT+TGG | - | chr8.1:77447432-77447451 | None:intergenic | 55.0% |
! | CTGGGTTTTCCCCAGATGTG+AGG | + | chr8.1:77450601-77450620 | MS.gene25041:CDS | 55.0% |
! | GCCTTGGCAGAATGGTGTTG+CGG | + | chr8.1:77446923-77446942 | MS.gene25041:intron | 55.0% |
!! | TTTTCAGGCAGGCGAATCCG+AGG | - | chr8.1:77451187-77451206 | None:intergenic | 55.0% |
ACCTGCCCTGTTGGATTGCC+TGG | - | chr8.1:77449792-77449811 | None:intergenic | 60.0% | |
AGTGTGAGGCTGCGACCTCT+AGG | + | chr8.1:77447434-77447453 | MS.gene25041:intron | 60.0% | |
CCTGCCCTGTTGGATTGCCT+GGG | - | chr8.1:77449791-77449810 | None:intergenic | 60.0% | |
GTCAAGCGGGTGACAATGGC+CGG | - | chr8.1:77451804-77451823 | None:intergenic | 60.0% | |
TACCCTCCATGGTGGCCATC+TGG | + | chr8.1:77449169-77449188 | MS.gene25041:CDS | 60.0% | |
TCAGGCTATCACGGGGAGTG+TGG | + | chr8.1:77450552-77450571 | MS.gene25041:intron | 60.0% | |
TTGCAGCTCACCTGCCCTGT+TGG | - | chr8.1:77449801-77449820 | None:intergenic | 60.0% | |
! | GCTGGAATTGAGGAGCGCGA+TGG | + | chr8.1:77448887-77448906 | MS.gene25041:CDS | 60.0% |
CCCAGGCAATCCAACAGGGC+AGG | + | chr8.1:77449788-77449807 | MS.gene25041:CDS | 65.0% | |
! | CACGGGGAGTGTGGAAAGCG+AGG | + | chr8.1:77450561-77450580 | MS.gene25041:CDS | 65.0% |
! | GGGGAGTGTGGAAAGCGAGG+AGG | + | chr8.1:77450564-77450583 | MS.gene25041:CDS | 65.0% |
GGCTGCTGGCCCAGAGACTG+AGG | - | chr8.1:77447973-77447992 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 77445403 | 77451863 | 77445403 | ID=MS.gene25041 |
chr8.1 | mRNA | 77445403 | 77451863 | 77445403 | ID=MS.gene25041.t1;Parent=MS.gene25041 |
chr8.1 | exon | 77445403 | 77445567 | 77445403 | ID=MS.gene25041.t1.exon1;Parent=MS.gene25041.t1 |
chr8.1 | CDS | 77445403 | 77445567 | 77445403 | ID=cds.MS.gene25041.t1;Parent=MS.gene25041.t1 |
chr8.1 | exon | 77446806 | 77446856 | 77446806 | ID=MS.gene25041.t1.exon2;Parent=MS.gene25041.t1 |
chr8.1 | CDS | 77446806 | 77446856 | 77446806 | ID=cds.MS.gene25041.t1;Parent=MS.gene25041.t1 |
chr8.1 | exon | 77447210 | 77447260 | 77447210 | ID=MS.gene25041.t1.exon3;Parent=MS.gene25041.t1 |
chr8.1 | CDS | 77447210 | 77447260 | 77447210 | ID=cds.MS.gene25041.t1;Parent=MS.gene25041.t1 |
chr8.1 | exon | 77447946 | 77448011 | 77447946 | ID=MS.gene25041.t1.exon4;Parent=MS.gene25041.t1 |
chr8.1 | CDS | 77447946 | 77448011 | 77447946 | ID=cds.MS.gene25041.t1;Parent=MS.gene25041.t1 |
chr8.1 | exon | 77448098 | 77448159 | 77448098 | ID=MS.gene25041.t1.exon5;Parent=MS.gene25041.t1 |
chr8.1 | CDS | 77448098 | 77448159 | 77448098 | ID=cds.MS.gene25041.t1;Parent=MS.gene25041.t1 |
chr8.1 | exon | 77448685 | 77448763 | 77448685 | ID=MS.gene25041.t1.exon6;Parent=MS.gene25041.t1 |
chr8.1 | CDS | 77448685 | 77448763 | 77448685 | ID=cds.MS.gene25041.t1;Parent=MS.gene25041.t1 |
chr8.1 | exon | 77448857 | 77448961 | 77448857 | ID=MS.gene25041.t1.exon7;Parent=MS.gene25041.t1 |
chr8.1 | CDS | 77448857 | 77448961 | 77448857 | ID=cds.MS.gene25041.t1;Parent=MS.gene25041.t1 |
chr8.1 | exon | 77449080 | 77449190 | 77449080 | ID=MS.gene25041.t1.exon8;Parent=MS.gene25041.t1 |
chr8.1 | CDS | 77449080 | 77449190 | 77449080 | ID=cds.MS.gene25041.t1;Parent=MS.gene25041.t1 |
chr8.1 | exon | 77449672 | 77449809 | 77449672 | ID=MS.gene25041.t1.exon9;Parent=MS.gene25041.t1 |
chr8.1 | CDS | 77449672 | 77449809 | 77449672 | ID=cds.MS.gene25041.t1;Parent=MS.gene25041.t1 |
chr8.1 | exon | 77449919 | 77449993 | 77449919 | ID=MS.gene25041.t1.exon10;Parent=MS.gene25041.t1 |
chr8.1 | CDS | 77449919 | 77449993 | 77449919 | ID=cds.MS.gene25041.t1;Parent=MS.gene25041.t1 |
chr8.1 | exon | 77450330 | 77450450 | 77450330 | ID=MS.gene25041.t1.exon11;Parent=MS.gene25041.t1 |
chr8.1 | CDS | 77450330 | 77450450 | 77450330 | ID=cds.MS.gene25041.t1;Parent=MS.gene25041.t1 |
chr8.1 | exon | 77450556 | 77450710 | 77450556 | ID=MS.gene25041.t1.exon12;Parent=MS.gene25041.t1 |
chr8.1 | CDS | 77450556 | 77450710 | 77450556 | ID=cds.MS.gene25041.t1;Parent=MS.gene25041.t1 |
chr8.1 | exon | 77450901 | 77450975 | 77450901 | ID=MS.gene25041.t1.exon13;Parent=MS.gene25041.t1 |
chr8.1 | CDS | 77450901 | 77450975 | 77450901 | ID=cds.MS.gene25041.t1;Parent=MS.gene25041.t1 |
chr8.1 | exon | 77451112 | 77451315 | 77451112 | ID=MS.gene25041.t1.exon14;Parent=MS.gene25041.t1 |
chr8.1 | CDS | 77451112 | 77451315 | 77451112 | ID=cds.MS.gene25041.t1;Parent=MS.gene25041.t1 |
chr8.1 | exon | 77451747 | 77451863 | 77451747 | ID=MS.gene25041.t1.exon15;Parent=MS.gene25041.t1 |
chr8.1 | CDS | 77451747 | 77451863 | 77451747 | ID=cds.MS.gene25041.t1;Parent=MS.gene25041.t1 |
Gene Sequence |
Protein sequence |