Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25089.t1 | XP_003627350.2 | 96.5 | 1088 | 26 | 2 | 1 | 1088 | 1 | 1076 | 0.00E+00 | 2115.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25089.t1 | Q8L748 | 64.2 | 1114 | 350 | 13 | 1 | 1082 | 1 | 1097 | 0.0e+00 | 1404.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25089.t1 | G7L8A5 | 96.5 | 1088 | 26 | 2 | 1 | 1088 | 1 | 1076 | 0.0e+00 | 2115.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049824 | MS.gene25089 | 0.832906 | 7.24E-56 | -1.69E-46 |
| MS.gene050877 | MS.gene25089 | 0.8007 | 1.27E-48 | -1.69E-46 |
| MS.gene050945 | MS.gene25089 | 0.822372 | 2.45E-53 | -1.69E-46 |
| MS.gene051450 | MS.gene25089 | 0.826794 | 2.23E-54 | -1.69E-46 |
| MS.gene051744 | MS.gene25089 | 0.802562 | 5.29E-49 | -1.69E-46 |
| MS.gene053122 | MS.gene25089 | 0.837682 | 4.50E-57 | -1.69E-46 |
| MS.gene053226 | MS.gene25089 | 0.812636 | 3.84E-51 | -1.69E-46 |
| MS.gene05364 | MS.gene25089 | 0.834015 | 3.83E-56 | -1.69E-46 |
| MS.gene054413 | MS.gene25089 | 0.820383 | 7.06E-53 | -1.69E-46 |
| MS.gene05978 | MS.gene25089 | 0.829417 | 5.21E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25089.t1 | MTR_8g022010 | 96.507 | 1088 | 26 | 2 | 1 | 1088 | 1 | 1076 | 0.0 | 2171 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25089.t1 | AT3G14120 | 65.596 | 1090 | 350 | 12 | 1 | 1082 | 1 | 1073 | 0.0 | 1440 |
| MS.gene25089.t1 | AT3G14120 | 64.356 | 1111 | 350 | 13 | 1 | 1082 | 1 | 1094 | 0.0 | 1428 |
| MS.gene25089.t1 | AT3G14120 | 64.183 | 1114 | 350 | 13 | 1 | 1082 | 1 | 1097 | 0.0 | 1424 |
Find 268 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCTCTTGTGGTTCCTTTA+TGG | 0.112266 | 8.4:-72281561 | MS.gene25089:CDS |
| CTCTGTACGCTATTCATTAA+AGG | 0.119276 | 8.4:-72283486 | MS.gene25089:CDS |
| CAGCCCACTTTCACTTAATT+TGG | 0.150697 | 8.4:+72283685 | None:intergenic |
| CTCCTTTGAAAACAGAAATT+TGG | 0.159095 | 8.4:+72272711 | None:intergenic |
| CTCTCTTGTGGTTCCTTTAT+GGG | 0.159196 | 8.4:-72281560 | MS.gene25089:CDS |
| AGGTGAGCTTCCTCGGTTTC+AGG | 0.188572 | 8.4:-72266375 | MS.gene25089:CDS |
| GCTTCCTCTCTGTGTCCTTT+TGG | 0.204457 | 8.4:-72276726 | MS.gene25089:CDS |
| CGCGAGAAGTTCCGCAGATA+TGG | 0.214814 | 8.4:-72284914 | MS.gene25089:CDS |
| CTTCATTTCCTCGCGGGCCT+CGG | 0.231518 | 8.4:+72272998 | None:intergenic |
| ACTTATGAAACTTGATTCTT+TGG | 0.233561 | 8.4:-72264439 | MS.gene25089:CDS |
| TGCAGATATTCTGTTCTTCT+TGG | 0.237183 | 8.4:+72264463 | None:intergenic |
| TTCTTCGATGGACGAATCTA+AGG | 0.238299 | 8.4:-72269542 | MS.gene25089:CDS |
| GAAACAAACATCACATTTAA+TGG | 0.238536 | 8.4:-72280653 | MS.gene25089:CDS |
| TTGTTTACATGATGGAATTT+AGG | 0.272162 | 8.4:-72272627 | MS.gene25089:CDS |
| TTGGTCATCAGTGGCATCTT+TGG | 0.274985 | 8.4:-72276617 | MS.gene25089:CDS |
| CTTCTAATGGACCTGAAAAT+TGG | 0.286910 | 8.4:-72275873 | MS.gene25089:CDS |
| TGTCAGAAGTTCCTTTCTTT+AGG | 0.295451 | 8.4:+72277629 | None:intergenic |
| AGGATGTATGGACTCTTCTA+AGG | 0.297421 | 8.4:-72276884 | MS.gene25089:CDS |
| GGCTCCTTTGATCCTTCTAA+TGG | 0.315142 | 8.4:-72275886 | MS.gene25089:CDS |
| GAAACGTTTCAGAATCTATC+AGG | 0.318651 | 8.4:-72282977 | MS.gene25089:intron |
| CATGTAGCAATGTACTCTTC+AGG | 0.330746 | 8.4:-72268674 | MS.gene25089:intron |
| GATTCGTCCATCGAAGAAAA+TGG | 0.338908 | 8.4:+72269547 | None:intergenic |
| ATCAGTGGCATCTTTGGAAA+TGG | 0.340767 | 8.4:-72276611 | MS.gene25089:CDS |
| CAGGTTTCTGTTTCTCTCAT+GGG | 0.340913 | 8.4:-72265985 | MS.gene25089:CDS |
| AAGTCAAGAAAGCGAGTTTC+AGG | 0.346358 | 8.4:+72265910 | None:intergenic |
| CCTTTCACAATGTAAGTTGC+AGG | 0.349817 | 8.4:+72266284 | None:intergenic |
| GACAGGAACTTCTGCATTCT+CGG | 0.352313 | 8.4:+72268344 | None:intergenic |
| TGTGGACTTTGCCGGTCTGC+TGG | 0.355863 | 8.4:-72276840 | MS.gene25089:CDS |
| ATCTCCCCAGCAGTGGTGTT+TGG | 0.360577 | 8.4:-72277669 | MS.gene25089:CDS |
| CTTAGCACTGTTATAGCTGC+TGG | 0.363388 | 8.4:-72267166 | MS.gene25089:CDS |
| TTCATTTCCTCGCGGGCCTC+GGG | 0.367738 | 8.4:+72272999 | None:intergenic |
| GTTCAGTCAACAGCAATTAC+AGG | 0.371855 | 8.4:-72265887 | MS.gene25089:intron |
| GGAGCAACAACGACAAATTC+AGG | 0.374077 | 8.4:-72275672 | MS.gene25089:intron |
| AGGATAGTCCAGTGGTTAGA+AGG | 0.375010 | 8.4:-72280586 | MS.gene25089:CDS |
| GTTGACCAACTTGGAACTTT+CGG | 0.375093 | 8.4:-72275943 | MS.gene25089:CDS |
| GCAGGTTTCTGTTTCTCTCA+TGG | 0.377266 | 8.4:-72265986 | MS.gene25089:intron |
| TCTGTTTCTCTCATGGGATC+AGG | 0.379130 | 8.4:-72265979 | MS.gene25089:CDS |
| AAGAGGCGTGTGGACTTTGC+CGG | 0.381719 | 8.4:-72276848 | MS.gene25089:CDS |
| AGGTCAACGGCTGATATTCC+TGG | 0.393573 | 8.4:-72283536 | MS.gene25089:CDS |
| TGTTGATTCAAAACTTGAAT+TGG | 0.393636 | 8.4:+72275850 | None:intergenic |
| AGGAAGAGGCACTTGAATTC+AGG | 0.394647 | 8.4:-72283737 | MS.gene25089:CDS |
| CCACGATAACTTGATTGAAC+TGG | 0.396958 | 8.4:-72265941 | MS.gene25089:CDS |
| CACTACCTCTGATGCGCAAT+AGG | 0.398263 | 8.4:+72276584 | None:intergenic |
| GTGCTATCCATGACCATATA+AGG | 0.401084 | 8.4:+72275266 | None:intergenic |
| AAGACGACCAGAATGTATTT+AGG | 0.401893 | 8.4:-72275237 | MS.gene25089:intron |
| ATCAAGTTATCGTGGGAATC+AGG | 0.404573 | 8.4:+72265949 | None:intergenic |
| TGCTTCCACTCTGCACAGAT+TGG | 0.404813 | 8.4:-72276328 | MS.gene25089:CDS |
| TCATCCATGCCAGGGATTCC+AGG | 0.407965 | 8.4:+72283518 | None:intergenic |
| TCCGTCTTAGATTGCTGCAT+TGG | 0.409534 | 8.4:+72276351 | None:intergenic |
| GCGCAGCATTAGTAGGACTA+TGG | 0.411018 | 8.4:+72283642 | None:intergenic |
| TGGTATGTCCGCTAGCATTA+AGG | 0.411181 | 8.4:+72275300 | None:intergenic |
| GCAATGCTCTGCCTGCCATC+TGG | 0.411776 | 8.4:-72267999 | MS.gene25089:CDS |
| CTTGGAAATTCACAGAATCA+AGG | 0.412349 | 8.4:+72264481 | None:intergenic |
| ATTGCCGTGTAACAGTTTCA+TGG | 0.414784 | 8.4:+72275699 | None:intergenic |
| AAACTTACCTAAATACATTC+TGG | 0.416786 | 8.4:+72275230 | None:intergenic |
| ACAGGTATGGCTTGAACATA+AGG | 0.417087 | 8.4:-72281653 | MS.gene25089:intron |
| CCGTCTTAGATTGCTGCATT+GGG | 0.420367 | 8.4:+72276352 | None:intergenic |
| AGAATAAGCGCAGCATTAGT+AGG | 0.421205 | 8.4:+72283635 | None:intergenic |
| GCATGAAGTTCAAGGAAAAC+AGG | 0.425168 | 8.4:+72268026 | None:intergenic |
| ATAGGTGCCCACACAGCTCT+TGG | 0.425335 | 8.4:-72268609 | MS.gene25089:CDS |
| CTGTTTGATACCTCTTTGAC+AGG | 0.425705 | 8.4:-72283398 | MS.gene25089:intron |
| GATGTAATGGACCGAAGTCC+TGG | 0.425827 | 8.4:-72275919 | MS.gene25089:CDS |
| GGAACTCTAAGTTGCCATCT+TGG | 0.426031 | 8.4:+72266306 | None:intergenic |
| TGAGGCACAATTGAGCTATA+TGG | 0.431101 | 8.4:+72280608 | None:intergenic |
| CTTAGTATCAGATCAGGAAT+AGG | 0.432722 | 8.4:+72283017 | None:intergenic |
| CACGTGTACTAGACCTTATA+TGG | 0.433257 | 8.4:-72275279 | MS.gene25089:CDS |
| AGTCTCTGCAAGTTGTTTCA+AGG | 0.434656 | 8.4:+72268572 | None:intergenic |
| TCAAATCTTAGTATCAGATC+AGG | 0.436673 | 8.4:+72283011 | None:intergenic |
| CAAGATATTCCTTTCTGCTA+TGG | 0.440416 | 8.4:-72269578 | MS.gene25089:CDS |
| AACATTTGCAGTCAGCATGC+TGG | 0.440998 | 8.4:-72276038 | MS.gene25089:intron |
| CTATTGTAGGTGAGCTTCCT+CGG | 0.442936 | 8.4:-72266382 | MS.gene25089:intron |
| AATCTCTTCTAGAGGATGTA+TGG | 0.444245 | 8.4:-72276896 | MS.gene25089:CDS |
| TGAGTTGTCACTAGAGGAAA+AGG | 0.444415 | 8.4:-72268319 | MS.gene25089:CDS |
| AAATATCCCGATTGGATGCT+TGG | 0.445498 | 8.4:-72266337 | MS.gene25089:CDS |
| CGAGGCCCGCGAGGAAATGA+AGG | 0.447759 | 8.4:-72272997 | MS.gene25089:CDS |
| GCCTATTTATACTATACTCT+TGG | 0.449543 | 8.4:+72264416 | None:intergenic |
| CGAAGTCCTGGACAAGTTGA+TGG | 0.452101 | 8.4:-72275907 | MS.gene25089:CDS |
| GAGCTTCAACAGAAGGAAAC+AGG | 0.452470 | 8.4:+72276694 | None:intergenic |
| ACTTTGCCGGTCTGCTGGAC+AGG | 0.453107 | 8.4:-72276835 | MS.gene25089:intron |
| TGGTCAACTCCTCCTCCTGC+TGG | 0.454154 | 8.4:+72275958 | None:intergenic |
| TGGAACTTTCGGAGATGTAA+TGG | 0.454179 | 8.4:-72275932 | MS.gene25089:CDS |
| ATGCATCGAAGAATGACTTC+TGG | 0.455900 | 8.4:+72266239 | None:intergenic |
| GCAATAGTCGGTGACGGACT+TGG | 0.457112 | 8.4:-72267217 | MS.gene25089:CDS |
| GATCCTCAGATGATACGATT+TGG | 0.458276 | 8.4:-72273053 | MS.gene25089:CDS |
| AGAGCTGTGTGGGCACCTAT+AGG | 0.459250 | 8.4:+72268612 | None:intergenic |
| GCTTTCTAAAGAGCAAATAC+TGG | 0.460475 | 8.4:-72280765 | MS.gene25089:intron |
| GAGTCTCGATGCTGATTACT+TGG | 0.460710 | 8.4:-72283588 | MS.gene25089:CDS |
| TTGCAGTTGCATGAAGTTCA+AGG | 0.461546 | 8.4:+72268018 | None:intergenic |
| AATGGCTTGTGAGTTTGTTA+CGG | 0.463445 | 8.4:-72280635 | MS.gene25089:CDS |
| ATGATGCCAAACACCACTGC+TGG | 0.464775 | 8.4:+72277663 | None:intergenic |
| GTGTAAAGTACTTTGTCATC+AGG | 0.464790 | 8.4:+72277547 | None:intergenic |
| TTGTGGTTCCTTTATGGGGA+AGG | 0.465817 | 8.4:-72281555 | MS.gene25089:intron |
| TTGACATTAGCAATTGTTGA+TGG | 0.466630 | 8.4:+72269271 | None:intergenic |
| ATATAGCTCAATTGTGCCTC+AGG | 0.466702 | 8.4:-72280606 | MS.gene25089:CDS |
| GGAAATGAAGGGTGCTCTCA+TGG | 0.466876 | 8.4:-72272985 | MS.gene25089:CDS |
| ATATATTACCTTCCCCATAA+AGG | 0.468026 | 8.4:+72281547 | None:intergenic |
| TCAGTGGCATCTTTGGAAAT+GGG | 0.468419 | 8.4:-72276610 | MS.gene25089:CDS |
| CTCAGTTGAGCAAGATTACT+CGG | 0.473177 | 8.4:-72283711 | MS.gene25089:CDS |
| AAGCAAGAAGGCGACTCGTT+GGG | 0.474566 | 8.4:-72283458 | MS.gene25089:CDS |
| TGCATCGAAGAATGACTTCT+GGG | 0.474862 | 8.4:+72266240 | None:intergenic |
| TCGCGAGTGGTGAGGTCTTG+TGG | 0.475733 | 8.4:+72284932 | None:intergenic |
| GCTTCCACTCTGCACAGATT+GGG | 0.479613 | 8.4:-72276327 | MS.gene25089:CDS |
| GTGATGCAACCTACCGCAAT+TGG | 0.479764 | 8.4:-72268380 | MS.gene25089:CDS |
| AGACGCAGTCAGTGTTTCCT+TGG | 0.479975 | 8.4:+72268278 | None:intergenic |
| TTCTTCGAGCATTGATACAT+AGG | 0.480500 | 8.4:-72269228 | MS.gene25089:intron |
| AGACCTCTTTGTTTACATGA+TGG | 0.480655 | 8.4:-72272635 | MS.gene25089:CDS |
| CAGAATACCAAGCATCCAAT+CGG | 0.480907 | 8.4:+72266330 | None:intergenic |
| TTTACATTTACGCAGGTTCG+CGG | 0.481920 | 8.4:-72277709 | MS.gene25089:intron |
| TGTGCCTCTTACAGGCCTCA+TGG | 0.483274 | 8.4:-72273077 | MS.gene25089:intron |
| ACATTTGCAGTCAGCATGCT+GGG | 0.483958 | 8.4:-72276037 | MS.gene25089:intron |
| CTATTCTTCTGTTGGTGATG+AGG | 0.485098 | 8.4:-72267925 | MS.gene25089:CDS |
| ATGTAGCAATGTACTCTTCA+GGG | 0.487508 | 8.4:-72268673 | MS.gene25089:intron |
| GCTGGGCAATGGCGAAGTCT+TGG | 0.488273 | 8.4:-72276020 | MS.gene25089:CDS |
| AGCACCCTTCATTTCCTCGC+GGG | 0.488882 | 8.4:+72272992 | None:intergenic |
| GTATGGACTCTTCTAAGGGC+TGG | 0.491405 | 8.4:-72276879 | MS.gene25089:CDS |
| AGCTTCTAAAGCACTTGACT+TGG | 0.491449 | 8.4:-72280560 | MS.gene25089:CDS |
| CATCACCAACAGAAGAATAG+AGG | 0.492239 | 8.4:+72267928 | None:intergenic |
| TGAATGCCACTATATCTTCA+AGG | 0.493330 | 8.4:-72267276 | MS.gene25089:CDS |
| TGGGCACCTATAGGCATTGC+TGG | 0.495209 | 8.4:+72268621 | None:intergenic |
| CTCTGTATTCCTCTAGAAAG+AGG | 0.496375 | 8.4:-72283556 | MS.gene25089:CDS |
| TACTCTCCACATAGAAATCA+AGG | 0.496644 | 8.4:+72268644 | None:intergenic |
| TTCAAAGGAGCACGAGGAGT+TGG | 0.498157 | 8.4:-72272698 | MS.gene25089:CDS |
| AGATCTCGAGAGATCAAGAT+TGG | 0.498495 | 8.4:-72269385 | MS.gene25089:CDS |
| GTGGTGCATACAGTAGCATC+TGG | 0.498510 | 8.4:+72267963 | None:intergenic |
| GCGAGAAGTTCCGCAGATAT+GGG | 0.502354 | 8.4:-72284913 | MS.gene25089:intron |
| ATCTGAGGGAGTTCGAAGAA+TGG | 0.503897 | 8.4:-72268515 | MS.gene25089:CDS |
| GGAATCCCTGGCATGGATGA+TGG | 0.503917 | 8.4:-72283515 | MS.gene25089:CDS |
| TCAAAACCATCATCCATGCC+AGG | 0.513635 | 8.4:+72283509 | None:intergenic |
| GCTTCCAAATTAAGTGAAAG+TGG | 0.514659 | 8.4:-72283689 | MS.gene25089:CDS |
| CTCGAAAACATTATGATCAT+CGG | 0.515167 | 8.4:+72268539 | None:intergenic |
| CTTCGTTGCTTAGCAATAGT+CGG | 0.516058 | 8.4:-72267229 | MS.gene25089:CDS |
| TACAATGGAAATATCCCGAT+TGG | 0.516479 | 8.4:-72266345 | MS.gene25089:CDS |
| TCTCTTGTGGTTCCTTTATG+GGG | 0.519983 | 8.4:-72281559 | MS.gene25089:CDS |
| AGAAAATAGCAGAGCTAGGT+GGG | 0.521605 | 8.4:-72276400 | MS.gene25089:CDS |
| TCTGAGGGAGTTCGAAGAAT+GGG | 0.522621 | 8.4:-72268514 | MS.gene25089:intron |
| GTCTCTGCAAGTTGTTTCAA+GGG | 0.522762 | 8.4:+72268573 | None:intergenic |
| CAAGCTGTTGAATTTGAAAG+TGG | 0.524385 | 8.4:-72276642 | MS.gene25089:CDS |
| AAGGAGCCATCAACTTGTCC+AGG | 0.524605 | 8.4:+72275901 | None:intergenic |
| GTGATGAGGTTGTCTCAAAT+CGG | 0.527451 | 8.4:-72267911 | MS.gene25089:CDS |
| GTTGAATTTGAAAGTGGCAT+TGG | 0.528201 | 8.4:-72276636 | MS.gene25089:CDS |
| GCTGATATTCCTGGAATCCC+TGG | 0.528919 | 8.4:-72283527 | MS.gene25089:CDS |
| CGTTCACTGCCAGCAGGAGG+AGG | 0.530394 | 8.4:-72275967 | MS.gene25089:CDS |
| TCTTGAAAATATTAAACAAG+AGG | 0.530658 | 8.4:-72283615 | MS.gene25089:CDS |
| GTTGAAGCTCTGTCGAAGAA+TGG | 0.532224 | 8.4:-72276681 | MS.gene25089:CDS |
| AAAGGAGCACGAGGAGTTGG+TGG | 0.533553 | 8.4:-72272695 | MS.gene25089:CDS |
| GTCACTAGAGGAAAAGGAAA+GGG | 0.534301 | 8.4:-72268313 | MS.gene25089:CDS |
| AGGTCTTGTGGATCGAAGAA+AGG | 0.534519 | 8.4:+72284944 | None:intergenic |
| GGATATTTCCATTGTAACTC+CGG | 0.534594 | 8.4:+72266352 | None:intergenic |
| AAGCTAAACCTTCTAACCAC+TGG | 0.534835 | 8.4:+72280578 | None:intergenic |
| GGAGGAGGAGTTGACCAACT+TGG | 0.534981 | 8.4:-72275952 | MS.gene25089:CDS |
| ATGTTGCCGCTTCATCGAGC+AGG | 0.535509 | 8.4:+72281586 | None:intergenic |
| ATTGCGGTAGGTTGCATCAC+AGG | 0.536167 | 8.4:+72268383 | None:intergenic |
| AACAGGTTCAAACCTCCAAA+AGG | 0.536258 | 8.4:+72276711 | None:intergenic |
| AGTGCCCTCTATTCTTCTGT+TGG | 0.536717 | 8.4:-72267933 | MS.gene25089:CDS |
| GAGCTTCCTCGGTTTCAGGC+CGG | 0.537041 | 8.4:-72266371 | MS.gene25089:CDS |
| CAGGAATGTTGTTCATCACC+TGG | 0.538079 | 8.4:-72277608 | MS.gene25089:CDS |
| GTCACTCGTTCACTGCCAGC+AGG | 0.539049 | 8.4:-72275973 | MS.gene25089:CDS |
| TCTAGTGACAACTCAGAGAC+AGG | 0.539313 | 8.4:+72268327 | None:intergenic |
| TACTAGACCTTATATGGTCA+TGG | 0.541153 | 8.4:-72275273 | MS.gene25089:CDS |
| ACTCAACGTTACCTAAAGAA+AGG | 0.543574 | 8.4:-72277640 | MS.gene25089:CDS |
| TTCGACAGAGCTTCAACAGA+AGG | 0.544143 | 8.4:+72276687 | None:intergenic |
| TTGTGAAAGGACTTTGTCGC+AGG | 0.546395 | 8.4:-72266271 | MS.gene25089:CDS |
| CAAGCAAGAAGGCGACTCGT+TGG | 0.548539 | 8.4:-72283459 | MS.gene25089:CDS |
| TTGCAGAAAATAGCAGAGCT+AGG | 0.548794 | 8.4:-72276404 | MS.gene25089:intron |
| GCAGTCAGCATGCTGGGCAA+TGG | 0.550304 | 8.4:-72276031 | MS.gene25089:intron |
| GCTGTTCTGCAACATCTGAC+AGG | 0.550330 | 8.4:+72269350 | None:intergenic |
| GGACCACATGATTTCAATGA+CGG | 0.551894 | 8.4:-72267196 | MS.gene25089:CDS |
| TGCTCACCTGTCCAGCAGAC+CGG | 0.552005 | 8.4:+72276829 | None:intergenic |
| CGGCAACATGGTCTCTCTTG+TGG | 0.552011 | 8.4:-72281572 | MS.gene25089:CDS |
| ACATTCTGGTCGTCTTCCAC+AGG | 0.553490 | 8.4:+72275244 | None:intergenic |
| AGAATACCAAGCATCCAATC+GGG | 0.554917 | 8.4:+72266331 | None:intergenic |
| AGGAAGAGAAACACACTGGC+TGG | 0.555629 | 8.4:-72268081 | MS.gene25089:CDS |
| AAGAAAACCAAGAGCTGTGT+GGG | 0.556017 | 8.4:+72268602 | None:intergenic |
| TGATGCCAAACACCACTGCT+GGG | 0.556207 | 8.4:+72277664 | None:intergenic |
| GCTAGATGTGCAGATAGACT+TGG | 0.559521 | 8.4:-72275998 | MS.gene25089:CDS |
| AGAGTACCAGCAATGCCTAT+AGG | 0.562763 | 8.4:-72268627 | MS.gene25089:CDS |
| AGTTATCGTGGGAATCAGGC+TGG | 0.562824 | 8.4:+72265953 | None:intergenic |
| AACTGTTACACGGCAATGCA+AGG | 0.563752 | 8.4:-72275693 | MS.gene25089:CDS |
| AGCACTTGACTTGGAAGCAA+AGG | 0.565563 | 8.4:-72280551 | MS.gene25089:intron |
| CATCTCCGAAAGTTCCAAGT+TGG | 0.568201 | 8.4:+72275938 | None:intergenic |
| TTAAAGGCTTGCAAGCAAGA+AGG | 0.569589 | 8.4:-72283470 | MS.gene25089:CDS |
| AAGGGCTATTTCAGCAGCCA+AGG | 0.571143 | 8.4:-72268295 | MS.gene25089:CDS |
| AGGTCCATTAGAAGGATCAA+AGG | 0.572414 | 8.4:+72275882 | None:intergenic |
| GTTTCAGGCCGGAGTTACAA+TGG | 0.573390 | 8.4:-72266360 | MS.gene25089:CDS |
| CATCAACTTGTCCAGGACTT+CGG | 0.574990 | 8.4:+72275908 | None:intergenic |
| GGACTCTTCTAAGGGCTGGA+AGG | 0.574990 | 8.4:-72276875 | MS.gene25089:CDS |
| CCTGCAACTTACATTGTGAA+AGG | 0.575901 | 8.4:-72266284 | MS.gene25089:CDS |
| ATTCCATCATGTAAACAAAG+AGG | 0.577332 | 8.4:+72272632 | None:intergenic |
| CCAGTTCAATCAAGTTATCG+TGG | 0.577924 | 8.4:+72265941 | None:intergenic |
| TCTTCGATGGACGAATCTAA+GGG | 0.578690 | 8.4:-72269541 | MS.gene25089:CDS |
| TAAAGAAAGGAACTTCTGAC+AGG | 0.581733 | 8.4:-72277627 | MS.gene25089:CDS |
| GCAGGTTCGCGGATCACATG+TGG | 0.582833 | 8.4:-72277698 | MS.gene25089:intron |
| ACAAACAATCTCCAGATGGC+AGG | 0.583932 | 8.4:+72267988 | None:intergenic |
| GTGGTGTGAAGCAAAGCCAC+TGG | 0.584170 | 8.4:+72269293 | None:intergenic |
| GAGTTGGAGCATCAAAGTCC+AGG | 0.584766 | 8.4:+72277590 | None:intergenic |
| CATAAGGCATCGAGTTGTTG+AGG | 0.585619 | 8.4:-72281637 | MS.gene25089:CDS |
| TGCTCGATGAAGCGGCAACA+TGG | 0.587017 | 8.4:-72281584 | MS.gene25089:CDS |
| AATGGAGGAAGAAATGGCAA+TGG | 0.587338 | 8.4:-72284972 | MS.gene25089:CDS |
| ATGGACAAGATTCTGACCGT+TGG | 0.589763 | 8.4:-72272966 | MS.gene25089:CDS |
| CACAGAGAGGAAGCTCTCCA+TGG | 0.590254 | 8.4:+72276735 | None:intergenic |
| GTAACTCCGGCCTGAAACCG+AGG | 0.591092 | 8.4:+72266365 | None:intergenic |
| GGCTTCCTATTGCGCATCAG+AGG | 0.591924 | 8.4:-72276589 | MS.gene25089:intron |
| GTAAGTATTCCATAGCAGAA+AGG | 0.592282 | 8.4:+72269569 | None:intergenic |
| TCCACTCTGCACAGATTGGG+AGG | 0.593465 | 8.4:-72276324 | MS.gene25089:intron |
| GGATGTATGGACTCTTCTAA+GGG | 0.594158 | 8.4:-72276883 | MS.gene25089:CDS |
| GGAACTTCTCGCGAGTGGTG+AGG | 0.595064 | 8.4:+72284924 | None:intergenic |
| GGTAGTTATCTCCCCAGCAG+TGG | 0.595914 | 8.4:-72277676 | MS.gene25089:CDS |
| CCCAATGCAGCAATCTAAGA+CGG | 0.598755 | 8.4:-72276352 | MS.gene25089:CDS |
| AGCCGTTGACCTCTTTCTAG+AGG | 0.599289 | 8.4:+72283547 | None:intergenic |
| AGTTTGCCTTGATTTCTATG+TGG | 0.599760 | 8.4:-72268650 | MS.gene25089:CDS |
| CTTTCACAATGTAAGTTGCA+GGG | 0.600191 | 8.4:+72266285 | None:intergenic |
| GCGGTCCCTTGAAGATATAG+TGG | 0.600450 | 8.4:+72267270 | None:intergenic |
| TCAGCTCCTGCTCGATGAAG+CGG | 0.601401 | 8.4:-72281592 | MS.gene25089:CDS |
| GGCTTGTGAGTTTGTTACGG+AGG | 0.602397 | 8.4:-72280632 | MS.gene25089:CDS |
| TGTCTCAAATCGGCAGCTAG+TGG | 0.602848 | 8.4:-72267901 | MS.gene25089:intron |
| GGACAAATTAATGAGGCAGA+AGG | 0.606309 | 8.4:-72281616 | MS.gene25089:CDS |
| ACATTAGCAATTGTTGATGG+TGG | 0.608932 | 8.4:+72269274 | None:intergenic |
| CAGAAAATAGCAGAGCTAGG+TGG | 0.613584 | 8.4:-72276401 | MS.gene25089:CDS |
| GAATGCCACTATATCTTCAA+GGG | 0.614626 | 8.4:-72267275 | MS.gene25089:CDS |
| CTTCCAAATTAAGTGAAAGT+GGG | 0.614863 | 8.4:-72283688 | MS.gene25089:CDS |
| TATTCCTGGAATCCCTGGCA+TGG | 0.615462 | 8.4:-72283522 | MS.gene25089:CDS |
| TGCTTAGCAATAGTCGGTGA+CGG | 0.618835 | 8.4:-72267223 | MS.gene25089:CDS |
| ATGGTCATGGATAGCACCTG+TGG | 0.619071 | 8.4:-72275260 | MS.gene25089:CDS |
| ACAAGATGAATCTCTTCTAG+AGG | 0.619857 | 8.4:-72276904 | MS.gene25089:CDS |
| ATCACCAACAGAAGAATAGA+GGG | 0.621079 | 8.4:+72267929 | None:intergenic |
| TTGTTGAGGACAAATTAATG+AGG | 0.621559 | 8.4:-72281623 | MS.gene25089:CDS |
| TGGAATTTAGGCTACACAGC+AGG | 0.623001 | 8.4:-72272615 | MS.gene25089:intron |
| CAAAACCATCATCCATGCCA+GGG | 0.623374 | 8.4:+72283510 | None:intergenic |
| TGTCTCTGAGTTGTCACTAG+AGG | 0.625166 | 8.4:-72268325 | MS.gene25089:CDS |
| CAGTTCAATCAAGTTATCGT+GGG | 0.627345 | 8.4:+72265942 | None:intergenic |
| AAAGTGGCATTGGTCATCAG+TGG | 0.628105 | 8.4:-72276626 | MS.gene25089:CDS |
| GCTTGGTATTCTGACCAAGA+TGG | 0.628121 | 8.4:-72266320 | MS.gene25089:CDS |
| TCTGCGGAACTTCTCGCGAG+TGG | 0.631805 | 8.4:+72284919 | None:intergenic |
| CAAGAAAACCAAGAGCTGTG+TGG | 0.638870 | 8.4:+72268601 | None:intergenic |
| AAGGAGCACGAGGAGTTGGT+GGG | 0.639639 | 8.4:-72272694 | MS.gene25089:CDS |
| GTGTAAAATATGATCACCAA+CGG | 0.642464 | 8.4:+72272950 | None:intergenic |
| CGAGTAATCTTGCTCAACTG+AGG | 0.644662 | 8.4:+72283712 | None:intergenic |
| TGTCACTAGAGGAAAAGGAA+AGG | 0.645031 | 8.4:-72268314 | MS.gene25089:CDS |
| CCACCGTCATTGAAATCATG+TGG | 0.646799 | 8.4:+72267193 | None:intergenic |
| GCACCAAATCGTATCATCTG+AGG | 0.647917 | 8.4:+72273050 | None:intergenic |
| CATATAAGGTCTAGTACACG+TGG | 0.648044 | 8.4:+72275280 | None:intergenic |
| ACCTCCCAATCTGTGCAGAG+TGG | 0.648501 | 8.4:+72276323 | None:intergenic |
| AAGGGCTGGAAGGCTAGAAG+AGG | 0.649819 | 8.4:-72276865 | MS.gene25089:CDS |
| TGATCCATGAAACTGTTACA+CGG | 0.649895 | 8.4:-72275703 | MS.gene25089:CDS |
| TTCCTCTAGAAAGAGGTCAA+CGG | 0.651975 | 8.4:-72283549 | MS.gene25089:CDS |
| GAGGCCCGCGAGGAAATGAA+GGG | 0.653429 | 8.4:-72272996 | MS.gene25089:CDS |
| GAGCACCCTTCATTTCCTCG+CGG | 0.654127 | 8.4:+72272991 | None:intergenic |
| ACTCGTTCACTGCCAGCAGG+AGG | 0.656023 | 8.4:-72275970 | MS.gene25089:CDS |
| GATGCCAAACACCACTGCTG+GGG | 0.660508 | 8.4:+72277665 | None:intergenic |
| AAACAAAGAGGTCTATGCAA+CGG | 0.662149 | 8.4:+72272644 | None:intergenic |
| CCACATGATTTCAATGACGG+TGG | 0.662681 | 8.4:-72267193 | MS.gene25089:CDS |
| ATATTTGCCCGAGGCCCGCG+AGG | 0.664965 | 8.4:-72273006 | MS.gene25089:CDS |
| GATAACTTGATTGAACTGGT+TGG | 0.669009 | 8.4:-72265937 | MS.gene25089:CDS |
| CAGGTTCGCGGATCACATGT+GGG | 0.670460 | 8.4:-72277697 | MS.gene25089:CDS |
| GGACACAAACAATCTCCAGA+TGG | 0.672446 | 8.4:+72267984 | None:intergenic |
| GGAAGGCTAGAAGAGGCGTG+TGG | 0.682147 | 8.4:-72276858 | MS.gene25089:CDS |
| ACAGATGACCTTAATGCTAG+CGG | 0.685378 | 8.4:-72275308 | MS.gene25089:intron |
| ACCTCCAAAAGGACACAGAG+AGG | 0.686576 | 8.4:+72276722 | None:intergenic |
| GTGTGTGGTACCTGTCAAAG+AGG | 0.687665 | 8.4:+72283388 | None:intergenic |
| GAACAATATCAATGCAATAG+CGG | 0.689570 | 8.4:+72267251 | None:intergenic |
| CTAACCACTGGACTATCCTG+AGG | 0.691903 | 8.4:+72280590 | None:intergenic |
| TGTGCTTAGATATTTGCCCG+AGG | 0.702420 | 8.4:-72273015 | MS.gene25089:CDS |
| ATACAGGAAGAGAAACACAC+TGG | 0.703738 | 8.4:-72268085 | MS.gene25089:intron |
| TGTGCCTCAGGATAGTCCAG+TGG | 0.712691 | 8.4:-72280594 | MS.gene25089:CDS |
| AGAGTAGTGACCCATATCTG+CGG | 0.715812 | 8.4:+72284903 | None:intergenic |
| AGAAGAGATGAAAGTTGTCG+TGG | 0.718554 | 8.4:+72275826 | None:intergenic |
| ATCATCTGAGGATCTCCATG+AGG | 0.722706 | 8.4:+72273062 | None:intergenic |
| ATAGAGGGCACTCGTCAGTG+TGG | 0.737049 | 8.4:+72267944 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 72264422 | 72284993 | 72264422 | ID=MS.gene25089 |
| chr8.4 | mRNA | 72264422 | 72284993 | 72264422 | ID=MS.gene25089.t1;Parent=MS.gene25089 |
| chr8.4 | exon | 72284914 | 72284993 | 72284914 | ID=MS.gene25089.t1.exon1;Parent=MS.gene25089.t1 |
| chr8.4 | CDS | 72284914 | 72284993 | 72284914 | ID=cds.MS.gene25089.t1;Parent=MS.gene25089.t1 |
| chr8.4 | exon | 72283399 | 72283757 | 72283399 | ID=MS.gene25089.t1.exon2;Parent=MS.gene25089.t1 |
| chr8.4 | CDS | 72283399 | 72283757 | 72283399 | ID=cds.MS.gene25089.t1;Parent=MS.gene25089.t1 |
| chr8.4 | exon | 72282978 | 72283047 | 72282978 | ID=MS.gene25089.t1.exon3;Parent=MS.gene25089.t1 |
| chr8.4 | CDS | 72282978 | 72283047 | 72282978 | ID=cds.MS.gene25089.t1;Parent=MS.gene25089.t1 |
| chr8.4 | exon | 72281556 | 72281671 | 72281556 | ID=MS.gene25089.t1.exon4;Parent=MS.gene25089.t1 |
| chr8.4 | CDS | 72281556 | 72281671 | 72281556 | ID=cds.MS.gene25089.t1;Parent=MS.gene25089.t1 |
| chr8.4 | exon | 72280766 | 72280797 | 72280766 | ID=MS.gene25089.t1.exon5;Parent=MS.gene25089.t1 |
| chr8.4 | CDS | 72280766 | 72280797 | 72280766 | ID=cds.MS.gene25089.t1;Parent=MS.gene25089.t1 |
| chr8.4 | exon | 72280552 | 72280677 | 72280552 | ID=MS.gene25089.t1.exon6;Parent=MS.gene25089.t1 |
| chr8.4 | CDS | 72280552 | 72280677 | 72280552 | ID=cds.MS.gene25089.t1;Parent=MS.gene25089.t1 |
| chr8.4 | exon | 72277558 | 72277716 | 72277558 | ID=MS.gene25089.t1.exon7;Parent=MS.gene25089.t1 |
| chr8.4 | CDS | 72277558 | 72277716 | 72277558 | ID=cds.MS.gene25089.t1;Parent=MS.gene25089.t1 |
| chr8.4 | exon | 72276836 | 72276928 | 72276836 | ID=MS.gene25089.t1.exon8;Parent=MS.gene25089.t1 |
| chr8.4 | CDS | 72276836 | 72276928 | 72276836 | ID=cds.MS.gene25089.t1;Parent=MS.gene25089.t1 |
| chr8.4 | exon | 72276590 | 72276757 | 72276590 | ID=MS.gene25089.t1.exon9;Parent=MS.gene25089.t1 |
| chr8.4 | CDS | 72276590 | 72276757 | 72276590 | ID=cds.MS.gene25089.t1;Parent=MS.gene25089.t1 |
| chr8.4 | exon | 72276325 | 72276420 | 72276325 | ID=MS.gene25089.t1.exon10;Parent=MS.gene25089.t1 |
| chr8.4 | CDS | 72276325 | 72276420 | 72276325 | ID=cds.MS.gene25089.t1;Parent=MS.gene25089.t1 |
| chr8.4 | exon | 72275808 | 72276049 | 72275808 | ID=MS.gene25089.t1.exon11;Parent=MS.gene25089.t1 |
| chr8.4 | CDS | 72275808 | 72276049 | 72275808 | ID=cds.MS.gene25089.t1;Parent=MS.gene25089.t1 |
| chr8.4 | exon | 72275673 | 72275730 | 72275673 | ID=MS.gene25089.t1.exon12;Parent=MS.gene25089.t1 |
| chr8.4 | CDS | 72275673 | 72275730 | 72275673 | ID=cds.MS.gene25089.t1;Parent=MS.gene25089.t1 |
| chr8.4 | exon | 72275238 | 72275326 | 72275238 | ID=MS.gene25089.t1.exon13;Parent=MS.gene25089.t1 |
| chr8.4 | CDS | 72275238 | 72275326 | 72275238 | ID=cds.MS.gene25089.t1;Parent=MS.gene25089.t1 |
| chr8.4 | exon | 72272948 | 72273085 | 72272948 | ID=MS.gene25089.t1.exon14;Parent=MS.gene25089.t1 |
| chr8.4 | CDS | 72272948 | 72273085 | 72272948 | ID=cds.MS.gene25089.t1;Parent=MS.gene25089.t1 |
| chr8.4 | exon | 72272616 | 72272738 | 72272616 | ID=MS.gene25089.t1.exon15;Parent=MS.gene25089.t1 |
| chr8.4 | CDS | 72272616 | 72272738 | 72272616 | ID=cds.MS.gene25089.t1;Parent=MS.gene25089.t1 |
| chr8.4 | exon | 72269517 | 72269615 | 72269517 | ID=MS.gene25089.t1.exon16;Parent=MS.gene25089.t1 |
| chr8.4 | CDS | 72269517 | 72269615 | 72269517 | ID=cds.MS.gene25089.t1;Parent=MS.gene25089.t1 |
| chr8.4 | exon | 72269229 | 72269417 | 72269229 | ID=MS.gene25089.t1.exon17;Parent=MS.gene25089.t1 |
| chr8.4 | CDS | 72269229 | 72269417 | 72269229 | ID=cds.MS.gene25089.t1;Parent=MS.gene25089.t1 |
| chr8.4 | exon | 72268515 | 72268689 | 72268515 | ID=MS.gene25089.t1.exon18;Parent=MS.gene25089.t1 |
| chr8.4 | CDS | 72268515 | 72268689 | 72268515 | ID=cds.MS.gene25089.t1;Parent=MS.gene25089.t1 |
| chr8.4 | exon | 72268262 | 72268418 | 72268262 | ID=MS.gene25089.t1.exon19;Parent=MS.gene25089.t1 |
| chr8.4 | CDS | 72268262 | 72268418 | 72268262 | ID=cds.MS.gene25089.t1;Parent=MS.gene25089.t1 |
| chr8.4 | exon | 72267902 | 72268101 | 72267902 | ID=MS.gene25089.t1.exon20;Parent=MS.gene25089.t1 |
| chr8.4 | CDS | 72267902 | 72268101 | 72267902 | ID=cds.MS.gene25089.t1;Parent=MS.gene25089.t1 |
| chr8.4 | exon | 72267158 | 72267299 | 72267158 | ID=MS.gene25089.t1.exon21;Parent=MS.gene25089.t1 |
| chr8.4 | CDS | 72267158 | 72267299 | 72267158 | ID=cds.MS.gene25089.t1;Parent=MS.gene25089.t1 |
| chr8.4 | exon | 72266235 | 72266395 | 72266235 | ID=MS.gene25089.t1.exon22;Parent=MS.gene25089.t1 |
| chr8.4 | CDS | 72266235 | 72266395 | 72266235 | ID=cds.MS.gene25089.t1;Parent=MS.gene25089.t1 |
| chr8.4 | exon | 72265888 | 72266004 | 72265888 | ID=MS.gene25089.t1.exon23;Parent=MS.gene25089.t1 |
| chr8.4 | CDS | 72265888 | 72266004 | 72265888 | ID=cds.MS.gene25089.t1;Parent=MS.gene25089.t1 |
| chr8.4 | exon | 72264422 | 72264532 | 72264422 | ID=MS.gene25089.t1.exon24;Parent=MS.gene25089.t1 |
| chr8.4 | CDS | 72264422 | 72264532 | 72264422 | ID=cds.MS.gene25089.t1;Parent=MS.gene25089.t1 |
| Gene Sequence |
| Protein sequence |
