Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25181.t1 | XP_013466581.1 | 97.2 | 351 | 9 | 1 | 1 | 351 | 1 | 350 | 1.70E-176 | 628.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25181.t1 | Q8GUU2 | 63.1 | 339 | 120 | 2 | 13 | 347 | 17 | 354 | 9.0e-118 | 424.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25181.t1 | A0A072VGQ3 | 97.2 | 351 | 9 | 1 | 1 | 351 | 1 | 350 | 1.2e-176 | 628.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene070293 | MS.gene25181 | PPI |
| MS.gene042467 | MS.gene25181 | PPI |
| MS.gene08162 | MS.gene25181 | PPI |
| MS.gene25181 | MS.gene41778 | PPI |
| MS.gene25181 | MS.gene067859 | PPI |
| MS.gene04341 | MS.gene25181 | PPI |
| MS.gene25181 | MS.gene04154 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25181.t1 | MTR_1g032440 | 97.721 | 351 | 7 | 1 | 1 | 351 | 1 | 350 | 0.0 | 712 |
| MS.gene25181.t1 | MTR_1g032440 | 97.651 | 298 | 6 | 1 | 1 | 298 | 1 | 297 | 0.0 | 595 |
| MS.gene25181.t1 | MTR_8g105330 | 70.349 | 344 | 84 | 6 | 11 | 351 | 8 | 336 | 7.83e-171 | 479 |
| MS.gene25181.t1 | MTR_4g102870 | 48.907 | 366 | 160 | 10 | 12 | 351 | 7 | 371 | 7.27e-113 | 333 |
| MS.gene25181.t1 | MTR_5g010720 | 51.320 | 341 | 143 | 6 | 34 | 351 | 47 | 387 | 1.68e-101 | 305 |
| MS.gene25181.t1 | MTR_7g076010 | 51.118 | 313 | 144 | 5 | 42 | 348 | 51 | 360 | 3.61e-90 | 275 |
| MS.gene25181.t1 | MTR_7g088500 | 46.021 | 289 | 128 | 4 | 65 | 351 | 35 | 297 | 1.76e-78 | 243 |
| MS.gene25181.t1 | MTR_1g011380 | 32.075 | 318 | 177 | 9 | 59 | 344 | 75 | 385 | 1.47e-40 | 147 |
| MS.gene25181.t1 | MTR_3g107995 | 30.897 | 301 | 174 | 9 | 70 | 344 | 69 | 361 | 1.40e-38 | 142 |
| MS.gene25181.t1 | MTR_7g088560 | 39.583 | 192 | 97 | 4 | 169 | 348 | 1 | 185 | 6.41e-35 | 126 |
| MS.gene25181.t1 | MTR_7g088570 | 39.000 | 200 | 103 | 5 | 164 | 351 | 102 | 294 | 4.26e-33 | 125 |
| MS.gene25181.t1 | MTR_5g096410 | 25.670 | 261 | 166 | 3 | 84 | 341 | 97 | 332 | 4.95e-23 | 98.6 |
| MS.gene25181.t1 | MTR_5g096410 | 26.437 | 261 | 167 | 3 | 84 | 341 | 97 | 335 | 6.84e-22 | 95.1 |
| MS.gene25181.t1 | MTR_5g096410 | 25.670 | 261 | 157 | 4 | 84 | 341 | 97 | 323 | 3.72e-21 | 93.2 |
| MS.gene25181.t1 | MTR_8g099495 | 55.769 | 52 | 22 | 1 | 291 | 341 | 338 | 389 | 1.38e-11 | 65.5 |
| MS.gene25181.t1 | MTR_8g099515 | 32.000 | 125 | 77 | 3 | 225 | 341 | 255 | 379 | 1.42e-11 | 65.5 |
| MS.gene25181.t1 | MTR_4g116460 | 52.830 | 53 | 23 | 2 | 297 | 347 | 437 | 489 | 2.70e-11 | 65.1 |
| MS.gene25181.t1 | MTR_4g116460 | 52.830 | 53 | 23 | 2 | 297 | 347 | 480 | 532 | 2.71e-11 | 65.1 |
| MS.gene25181.t1 | MTR_8g072020 | 54.545 | 55 | 23 | 2 | 296 | 348 | 401 | 455 | 8.42e-11 | 63.5 |
| MS.gene25181.t1 | MTR_8g072020 | 54.545 | 55 | 23 | 2 | 296 | 348 | 440 | 494 | 8.49e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene25181.t1 | AT1G68070 | 68.129 | 342 | 93 | 5 | 12 | 350 | 14 | 342 | 9.21e-170 | 476 |
| MS.gene25181.t1 | AT2G01735 | 65.407 | 344 | 110 | 3 | 11 | 348 | 15 | 355 | 3.76e-160 | 452 |
| MS.gene25181.t1 | AT3G61180 | 51.445 | 346 | 141 | 6 | 28 | 351 | 39 | 379 | 9.89e-119 | 348 |
| MS.gene25181.t1 | AT4G11680 | 54.790 | 334 | 140 | 5 | 26 | 351 | 60 | 390 | 1.75e-109 | 325 |
| MS.gene25181.t1 | AT4G11680 | 50.413 | 363 | 140 | 6 | 26 | 351 | 60 | 419 | 4.78e-103 | 310 |
| MS.gene25181.t1 | AT2G01735 | 65.000 | 240 | 75 | 3 | 11 | 244 | 15 | 251 | 1.63e-102 | 302 |
| MS.gene25181.t1 | AT1G12760 | 51.558 | 353 | 137 | 7 | 27 | 348 | 52 | 401 | 1.05e-101 | 306 |
| MS.gene25181.t1 | AT1G12760 | 52.108 | 332 | 131 | 4 | 42 | 348 | 2 | 330 | 1.88e-101 | 303 |
| MS.gene25181.t1 | AT1G63170 | 51.603 | 343 | 138 | 5 | 32 | 348 | 33 | 373 | 6.71e-95 | 287 |
| MS.gene25181.t1 | AT4G32600 | 29.316 | 307 | 187 | 8 | 70 | 351 | 113 | 414 | 4.58e-41 | 149 |
| MS.gene25181.t1 | AT4G32600 | 29.316 | 307 | 187 | 8 | 70 | 351 | 113 | 414 | 4.58e-41 | 149 |
| MS.gene25181.t1 | AT1G80400 | 28.099 | 363 | 209 | 10 | 20 | 344 | 51 | 399 | 1.19e-40 | 147 |
| MS.gene25181.t1 | AT4G26580 | 27.037 | 270 | 156 | 7 | 81 | 344 | 99 | 333 | 3.06e-24 | 101 |
| MS.gene25181.t1 | AT4G26580 | 27.037 | 270 | 156 | 7 | 81 | 344 | 99 | 333 | 3.06e-24 | 101 |
| MS.gene25181.t1 | AT5G55970 | 27.138 | 269 | 161 | 6 | 81 | 344 | 103 | 341 | 5.64e-24 | 101 |
| MS.gene25181.t1 | AT5G55970 | 27.138 | 269 | 161 | 6 | 81 | 344 | 103 | 341 | 5.64e-24 | 101 |
| MS.gene25181.t1 | AT1G55530 | 28.846 | 104 | 72 | 1 | 241 | 344 | 133 | 234 | 7.98e-12 | 65.9 |
| MS.gene25181.t1 | AT1G55530 | 30.612 | 98 | 66 | 1 | 247 | 344 | 172 | 267 | 1.78e-11 | 65.1 |
| MS.gene25181.t1 | AT1G55530 | 30.612 | 98 | 66 | 1 | 247 | 344 | 172 | 267 | 1.78e-11 | 65.1 |
Find 96 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATATTCGAAATCTGTATTT+TGG | 0.183808 | 1.3:-17364537 | None:intergenic |
| ATTCTTCATGCATAATAAAA+TGG | 0.229080 | 1.3:+17365440 | MS.gene25181:CDS |
| TGCCATCTTCTGTGTTGTTT+TGG | 0.232051 | 1.3:+17364319 | MS.gene25181:CDS |
| GTATGCACTGGTGGTTTCTA+TGG | 0.253010 | 1.3:-17364604 | None:intergenic |
| ACTTCCCTCGCTCAGCTTCT+CGG | 0.363663 | 1.3:+17361287 | MS.gene25181:CDS |
| GTCGCGAATCCCTCCGATTA+CGG | 0.368870 | 1.3:-17361574 | None:intergenic |
| GCTATTCTCTATGCTGTTGC+GGG | 0.374371 | 1.3:+17364389 | MS.gene25181:CDS |
| TTGAGTATCACCGCCGTAAT+CGG | 0.376851 | 1.3:+17361561 | MS.gene25181:CDS |
| ATACCGGGGTTTCATTCCTT+TGG | 0.393924 | 1.3:+17363428 | MS.gene25181:CDS |
| CGAAGAACGTCGTGCCGATT+GGG | 0.394795 | 1.3:+17361370 | MS.gene25181:CDS |
| GATGGTTGCAGGGAAGAGTA+TGG | 0.396930 | 1.3:-17365411 | None:intergenic |
| TTCATTCCTTTGGTGGATGG+TGG | 0.402298 | 1.3:+17363438 | MS.gene25181:CDS |
| GGTTTCATTCCTTTGGTGGA+TGG | 0.407138 | 1.3:+17363435 | MS.gene25181:CDS |
| CCGGGGTTTCATTCCTTTGG+TGG | 0.410402 | 1.3:+17363431 | MS.gene25181:CDS |
| GTTCACGCGCCGCCGTTTCA+CGG | 0.415114 | 1.3:-17361346 | None:intergenic |
| CGAACATGCCGATCCGCGTT+TGG | 0.419996 | 1.3:+17361489 | MS.gene25181:CDS |
| TCTCTATGCTGTTGCGGGAC+AGG | 0.424869 | 1.3:+17364394 | MS.gene25181:CDS |
| CATGGCGTTCGTTGTTGTAT+CGG | 0.432864 | 1.3:+17361433 | MS.gene25181:CDS |
| AGAAACCACCAGTGCATACT+TGG | 0.436646 | 1.3:+17364608 | MS.gene25181:CDS |
| CAAACGCGGATCGGCATGTT+CGG | 0.442712 | 1.3:-17361488 | None:intergenic |
| TCATTCCTTTGGTGGATGGT+GGG | 0.449593 | 1.3:+17363439 | MS.gene25181:CDS |
| AGAATGGAAATGATGGTTGC+AGG | 0.452786 | 1.3:-17365422 | None:intergenic |
| GACATGTCGAGCGCTACAAC+TGG | 0.455225 | 1.3:-17361404 | None:intergenic |
| CATGAAGGCAACGGCGGTGG+CGG | 0.460115 | 1.3:+17361257 | MS.gene25181:CDS |
| GAGAAGGATAGTGGTGGAGC+TGG | 0.468638 | 1.3:+17364570 | MS.gene25181:CDS |
| ATCTGTTCTTGTCCGTGAAA+CGG | 0.474143 | 1.3:+17361334 | MS.gene25181:CDS |
| AGCTCTACTCCATCTTCATA+TGG | 0.474255 | 1.3:-17365388 | None:intergenic |
| CAGCTTCTCGGACGCGCCAC+CGG | 0.476801 | 1.3:+17361299 | MS.gene25181:CDS |
| GGGATTCGCGACGGAGGCAG+AGG | 0.477156 | 1.3:+17361585 | MS.gene25181:CDS |
| TATTCTCAAGGGAAACGAAC+AGG | 0.479763 | 1.3:+17365501 | MS.gene25181:CDS |
| ATTTATTGATTCGCATCGCT+TGG | 0.481929 | 1.3:-17363407 | None:intergenic |
| TGCTATTCTCTATGCTGTTG+CGG | 0.491315 | 1.3:+17364388 | MS.gene25181:CDS |
| AACAGATGGTCCTCTTCGTC+CGG | 0.493307 | 1.3:-17361318 | None:intergenic |
| AACAATGAGGAGAAGGATAG+TGG | 0.493619 | 1.3:+17364561 | MS.gene25181:CDS |
| CCGATCCGCGTTTGGATCGT+AGG | 0.496250 | 1.3:+17361497 | MS.gene25181:CDS |
| TGCCAAAACAACACAGAAGA+TGG | 0.498684 | 1.3:-17364321 | None:intergenic |
| CATCATGAAGGCAACGGCGG+TGG | 0.503117 | 1.3:+17361254 | MS.gene25181:CDS |
| AAGATGCTCCACGCTTGTAC+TGG | 0.503612 | 1.3:+17363500 | MS.gene25181:CDS |
| TCGAAGAACGTCGTGCCGAT+TGG | 0.504046 | 1.3:+17361369 | MS.gene25181:CDS |
| TTGTAAGTACAATATTCTCA+AGG | 0.522566 | 1.3:+17365489 | MS.gene25181:CDS |
| GGAAATCATACCGCATCCTC+AGG | 0.524464 | 1.3:-17364651 | None:intergenic |
| GAAGCTGAGCGAGGGAAGTA+CGG | 0.525268 | 1.3:-17361283 | None:intergenic |
| TTCAGTTGCCAAGTATGCAC+TGG | 0.526251 | 1.3:-17364616 | None:intergenic |
| ATAGAGAATAGCAATGATGC+AGG | 0.528520 | 1.3:-17364378 | None:intergenic |
| CGATGCGAATCAATAAATAC+CGG | 0.531657 | 1.3:+17363412 | MS.gene25181:CDS |
| ACGTGAATTCGTCTCAGTCC+AGG | 0.532228 | 1.3:+17361663 | MS.gene25181:CDS |
| TTGTACATGTTGTCTTGGTG+TGG | 0.534657 | 1.3:+17361537 | MS.gene25181:CDS |
| TAGTGGTGGAGCTGGATCAA+TGG | 0.540698 | 1.3:+17364578 | MS.gene25181:CDS |
| CCTACGATCCAAACGCGGAT+CGG | 0.541806 | 1.3:-17361497 | None:intergenic |
| TATGCACTGGTGGTTTCTAT+GGG | 0.542265 | 1.3:-17364603 | None:intergenic |
| AGTATCACCGCCGTAATCGG+AGG | 0.542558 | 1.3:+17361564 | MS.gene25181:CDS |
| TGCCTCTGTCCATATGAAGA+TGG | 0.543393 | 1.3:+17365379 | MS.gene25181:CDS |
| TTGTAGCGCTCGACATGTCA+TGG | 0.545566 | 1.3:+17361408 | MS.gene25181:CDS |
| AGTTGCCAAGTATGCACTGG+TGG | 0.550119 | 1.3:-17364613 | None:intergenic |
| GCTCGACATGTCATGGAACA+TGG | 0.552366 | 1.3:+17361415 | MS.gene25181:CDS |
| AATATCAAACAATGAGGAGA+AGG | 0.552713 | 1.3:+17364554 | MS.gene25181:CDS |
| AGAATATTGTACTTACAAAG+AGG | 0.557808 | 1.3:-17365484 | None:intergenic |
| TGTAAGTACAATATTCTCAA+GGG | 0.561290 | 1.3:+17365490 | MS.gene25181:CDS |
| TGGCTTCGAGTATCCCCAAT+CGG | 0.569719 | 1.3:-17361384 | None:intergenic |
| CGCTCACATCATGAAGGCAA+CGG | 0.578089 | 1.3:+17361248 | MS.gene25181:CDS |
| TGCATGAAGAATGGAAATGA+TGG | 0.580086 | 1.3:-17365429 | None:intergenic |
| CGCGTCCGAGAAGCTGAGCG+AGG | 0.580325 | 1.3:-17361292 | None:intergenic |
| CCACCAAAGGAATGAAACCC+CGG | 0.583287 | 1.3:-17363431 | None:intergenic |
| AGATGGTCCTCTTCGTCCGG+TGG | 0.583491 | 1.3:-17361315 | None:intergenic |
| GGACGCGCCACCGGACGAAG+AGG | 0.583915 | 1.3:+17361308 | MS.gene25181:CDS |
| CTTCTCCGCTCACATCATGA+AGG | 0.590176 | 1.3:+17361242 | MS.gene25181:CDS |
| GGATTCGCGACGGAGGCAGA+GGG | 0.590732 | 1.3:+17361586 | MS.gene25181:CDS |
| GAAGAACGTCGTGCCGATTG+GGG | 0.594506 | 1.3:+17361371 | MS.gene25181:CDS |
| GGCGTTCGTTGTTGTATCGG+CGG | 0.595812 | 1.3:+17361436 | MS.gene25181:CDS |
| GAATGGAAATGATGGTTGCA+GGG | 0.597135 | 1.3:-17365421 | None:intergenic |
| GTATCACCGCCGTAATCGGA+GGG | 0.597390 | 1.3:+17361565 | MS.gene25181:CDS |
| AGCGTGGAGCATCTTGCAGA+AGG | 0.597658 | 1.3:-17363492 | None:intergenic |
| GCGTCCGAGAAGCTGAGCGA+GGG | 0.602931 | 1.3:-17361291 | None:intergenic |
| TCATGATGTGAGCGGAGAAG+CGG | 0.615465 | 1.3:-17361239 | None:intergenic |
| GATGCGAATCAATAAATACC+GGG | 0.616183 | 1.3:+17363413 | MS.gene25181:CDS |
| CATGTTCGGATGCTCGTCAA+CGG | 0.617231 | 1.3:-17361474 | None:intergenic |
| GTTTCACGGACAAGAACAGA+TGG | 0.620201 | 1.3:-17361332 | None:intergenic |
| ATCGGAGGGATTCGCGACGG+AGG | 0.626472 | 1.3:+17361579 | MS.gene25181:CDS |
| AAAAGCCCACCATCCACCAA+AGG | 0.634811 | 1.3:-17363444 | None:intergenic |
| GATGCTGAATTCAGTTCCGA+CGG | 0.635749 | 1.3:+17361614 | MS.gene25181:CDS |
| GTCATCACTATCGTTACCGT+CGG | 0.642079 | 1.3:-17361630 | None:intergenic |
| TGTTCTTGTCCGTGAAACGG+CGG | 0.650630 | 1.3:+17361337 | MS.gene25181:CDS |
| GAGCGGAGAAGCGGTGTCTG+TGG | 0.654763 | 1.3:-17361230 | None:intergenic |
| CTCCATCTTCATATGGACAG+AGG | 0.658470 | 1.3:-17365381 | None:intergenic |
| AAAGCTTACCAGTACAAGCG+TGG | 0.660127 | 1.3:-17363508 | None:intergenic |
| AACGATAGTGATGACAGCGA+TGG | 0.663555 | 1.3:+17361638 | MS.gene25181:CDS |
| CGTTGCCTTCATGATGTGAG+CGG | 0.668534 | 1.3:-17361247 | None:intergenic |
| ATTTCGAATATCAAACAATG+AGG | 0.669915 | 1.3:+17364548 | MS.gene25181:CDS |
| TAGAGAATAGCAATGATGCA+GGG | 0.670826 | 1.3:-17364377 | None:intergenic |
| AATGAGGAGAAGGATAGTGG+TGG | 0.671940 | 1.3:+17364564 | MS.gene25181:CDS |
| GCGAATCCCTCCGATTACGG+CGG | 0.690339 | 1.3:-17361571 | None:intergenic |
| GTAATCGGAGGGATTCGCGA+CGG | 0.697839 | 1.3:+17361576 | MS.gene25181:CDS |
| TCACATCATGAAGGCAACGG+CGG | 0.699092 | 1.3:+17361251 | MS.gene25181:CDS |
| CGTAACCTACGATCCAAACG+CGG | 0.712893 | 1.3:-17361502 | None:intergenic |
| GCTGAGCGAGGGAAGTACGG+CGG | 0.716868 | 1.3:-17361280 | None:intergenic |
| ATGCGAATCAATAAATACCG+GGG | 0.727668 | 1.3:+17363414 | MS.gene25181:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATACATAATTCAATTAAA+AGG | - | chr1.3:17363822-17363841 | None:intergenic | 10.0% |
| !! | ATAAATATAACATATAACAT+AGG | + | chr1.3:17362034-17362053 | MS.gene25181:intron | 10.0% |
| !! | TCAATTATTGATATAAAAAA+TGG | - | chr1.3:17362771-17362790 | None:intergenic | 10.0% |
| !!! | AAAATTTAACTTCTTATAAT+AGG | - | chr1.3:17364980-17364999 | None:intergenic | 10.0% |
| !!! | AAATTTAACTTCTTATAATA+GGG | - | chr1.3:17364979-17364998 | None:intergenic | 10.0% |
| !! | AATAAATAGAACAATTAGAA+AGG | - | chr1.3:17364465-17364484 | None:intergenic | 15.0% |
| !! | AATGCAAAATTAATATCATA+AGG | - | chr1.3:17361801-17361820 | None:intergenic | 15.0% |
| !! | ATTTATTTGAGAGATAAAAT+TGG | - | chr1.3:17364116-17364135 | None:intergenic | 15.0% |
| !! | TGTGTAATATAAATATAAGT+TGG | + | chr1.3:17362716-17362735 | MS.gene25181:intron | 15.0% |
| !!! | AATTTTATCTCTCAAATAAA+TGG | + | chr1.3:17364115-17364134 | MS.gene25181:intron | 15.0% |
| !!! | ATAAAAATTTTCTTGATCAA+AGG | + | chr1.3:17363982-17364001 | MS.gene25181:intron | 15.0% |
| !!! | ATGTATATATTTGTTGATTT+TGG | + | chr1.3:17363678-17363697 | MS.gene25181:intron | 15.0% |
| !!! | CACAAATTTTTAAAATATCA+AGG | - | chr1.3:17364886-17364905 | None:intergenic | 15.0% |
| !!! | TATAAGAAGTTAAATTTTGA+AGG | + | chr1.3:17364982-17365001 | MS.gene25181:intron | 15.0% |
| !! | ACTTGAAATACAAGTATATA+AGG | - | chr1.3:17363855-17363874 | None:intergenic | 20.0% |
| !! | AGTTTCTTCTAAATATTTCT+TGG | + | chr1.3:17365223-17365242 | MS.gene25181:intron | 20.0% |
| !! | ATGCATGTTAAAAGAAAAAA+GGG | + | chr1.3:17365143-17365162 | MS.gene25181:intron | 20.0% |
| !! | ATTCTTCATGCATAATAAAA+TGG | + | chr1.3:17365440-17365459 | MS.gene25181:CDS | 20.0% |
| !! | GGTATGAATAAAAAATAGTT+TGG | + | chr1.3:17364415-17364434 | MS.gene25181:intron | 20.0% |
| !! | TAATATATATTACGTAGCTA+TGG | - | chr1.3:17362694-17362713 | None:intergenic | 20.0% |
| !! | TATGTAGTGTAAAAAATTCA+TGG | - | chr1.3:17363038-17363057 | None:intergenic | 20.0% |
| !! | TATTCTCTCTTATAAACAAA+GGG | - | chr1.3:17363778-17363797 | None:intergenic | 20.0% |
| !! | TATTTATAGATGACCAAAAT+GGG | + | chr1.3:17364160-17364179 | MS.gene25181:intron | 20.0% |
| !! | TTAGACTTTACAATGAATTT+GGG | + | chr1.3:17361993-17362012 | MS.gene25181:intron | 20.0% |
| !! | TTATAATAGGGATACAAAAA+GGG | - | chr1.3:17364967-17364986 | None:intergenic | 20.0% |
| !! | TTTAGACTTTACAATGAATT+TGG | + | chr1.3:17361992-17362011 | MS.gene25181:intron | 20.0% |
| !! | TTTCAAATAATGCAATCAAT+TGG | - | chr1.3:17365054-17365073 | None:intergenic | 20.0% |
| !!! | AATTTGAGTTAAACAAACAA+CGG | + | chr1.3:17364926-17364945 | MS.gene25181:intron | 20.0% |
| !!! | AATTTTTTTTTTTGCATGCT+AGG | + | chr1.3:17361737-17361756 | MS.gene25181:intron | 20.0% |
| !!! | AGATTTGTAGATACTTATTT+TGG | + | chr1.3:17363365-17363384 | MS.gene25181:intron | 20.0% |
| !!! | ATTACATTTTGAGTGAATAT+AGG | + | chr1.3:17364482-17364501 | MS.gene25181:intron | 20.0% |
| !!! | ATTTTATTATGCATGAAGAA+TGG | - | chr1.3:17365441-17365460 | None:intergenic | 20.0% |
| !!! | ATTTTTTTTTTTGCATGCTA+GGG | + | chr1.3:17361738-17361757 | MS.gene25181:intron | 20.0% |
| !!! | CATTATTTGAAACTTCTTTT+TGG | + | chr1.3:17365062-17365081 | MS.gene25181:intron | 20.0% |
| !!! | TCTAAAACAAACAATTCAAA+AGG | - | chr1.3:17363734-17363753 | None:intergenic | 20.0% |
| ! | AAAATCGAATAAAATTCACC+TGG | - | chr1.3:17361684-17361703 | None:intergenic | 25.0% |
| ! | AATGGAAATCAATTGTTCAA+TGG | + | chr1.3:17364726-17364745 | MS.gene25181:intron | 25.0% |
| ! | ACCAGGTTTATTTAAATATC+AGG | - | chr1.3:17362954-17362973 | None:intergenic | 25.0% |
| ! | ACGAATTTGAAAAATCATCT+TGG | - | chr1.3:17363930-17363949 | None:intergenic | 25.0% |
| ! | ACTGAAATAAATTGTGTTTC+AGG | - | chr1.3:17364675-17364694 | None:intergenic | 25.0% |
| ! | AGAATATTGTACTTACAAAG+AGG | - | chr1.3:17365487-17365506 | None:intergenic | 25.0% |
| ! | AGTGACTAAAATAGAAAATC+AGG | - | chr1.3:17364764-17364783 | None:intergenic | 25.0% |
| ! | ATATGTATAGATATGTGGTT+GGG | + | chr1.3:17363302-17363321 | MS.gene25181:intron | 25.0% |
| ! | ATTTCGAATATCAAACAATG+AGG | + | chr1.3:17364548-17364567 | MS.gene25181:CDS | 25.0% |
| ! | CTAGCAAATAAACTGATAAT+AGG | + | chr1.3:17365167-17365186 | MS.gene25181:intron | 25.0% |
| ! | CTTATAATAGGGATACAAAA+AGG | - | chr1.3:17364968-17364987 | None:intergenic | 25.0% |
| ! | GATGCATGTTAAAAGAAAAA+AGG | + | chr1.3:17365142-17365161 | MS.gene25181:intron | 25.0% |
| ! | GTATTCTCTCTTATAAACAA+AGG | - | chr1.3:17363779-17363798 | None:intergenic | 25.0% |
| ! | GTATTTATAGATGACCAAAA+TGG | + | chr1.3:17364159-17364178 | MS.gene25181:intron | 25.0% |
| ! | GTGACTAAAATAGAAAATCA+GGG | - | chr1.3:17364763-17364782 | None:intergenic | 25.0% |
| ! | TAGACTTTACAATGAATTTG+GGG | + | chr1.3:17361994-17362013 | MS.gene25181:intron | 25.0% |
| ! | TAGCTATATGTATAGATATG+TGG | + | chr1.3:17363297-17363316 | MS.gene25181:intron | 25.0% |
| ! | TATATGTATAGATATGTGGT+TGG | + | chr1.3:17363301-17363320 | MS.gene25181:intron | 25.0% |
| ! | TCCTGATATTTAAATAAACC+TGG | + | chr1.3:17362950-17362969 | MS.gene25181:intron | 25.0% |
| ! | TGATATTTAAATAAACCTGG+TGG | + | chr1.3:17362953-17362972 | MS.gene25181:intron | 25.0% |
| ! | TGTAAGTACAATATTCTCAA+GGG | + | chr1.3:17365490-17365509 | MS.gene25181:CDS | 25.0% |
| ! | TTAAAATCAAACGTTCCAAA+GGG | - | chr1.3:17362567-17362586 | None:intergenic | 25.0% |
| ! | TTCTAAATATTTCTTGGAAG+AGG | + | chr1.3:17365229-17365248 | MS.gene25181:intron | 25.0% |
| ! | TTCTATTCTATTGTAGTAAG+TGG | - | chr1.3:17363907-17363926 | None:intergenic | 25.0% |
| ! | TTGTAAGTACAATATTCTCA+AGG | + | chr1.3:17365489-17365508 | MS.gene25181:CDS | 25.0% |
| ! | TTTCAAATTATTAGCTGTGT+CGG | - | chr1.3:17362180-17362199 | None:intergenic | 25.0% |
| !! | AAACTCTGAAAATTGTAAGT+TGG | - | chr1.3:17365314-17365333 | None:intergenic | 25.0% |
| !! | ATAAATATAAGTTGGCATTG+AGG | + | chr1.3:17362724-17362743 | MS.gene25181:intron | 25.0% |
| !! | GATATTCGAAATCTGTATTT+TGG | - | chr1.3:17364540-17364559 | None:intergenic | 25.0% |
| !! | TTCTTTTAGTACTAAAGGAT+GGG | + | chr1.3:17365100-17365119 | MS.gene25181:intron | 25.0% |
| !! | TTTTGTGCAATTATTCAATG+TGG | + | chr1.3:17362821-17362840 | MS.gene25181:intron | 25.0% |
| !!! | AAAATTGTAAGTTGGTTTCT+GGG | - | chr1.3:17365306-17365325 | None:intergenic | 25.0% |
| !!! | AATTGTTTGTTTTAGAGAGA+CGG | + | chr1.3:17363738-17363757 | MS.gene25181:intron | 25.0% |
| !!! | ACTTGTTTTTGAATCTTTAC+AGG | + | chr1.3:17364261-17364280 | MS.gene25181:intron | 25.0% |
| !!! | AGAATATTTGCTATTTGTAC+CGG | + | chr1.3:17363617-17363636 | MS.gene25181:intron | 25.0% |
| !!! | CGTAAATTTCAAAAGTACTA+GGG | + | chr1.3:17363947-17363966 | MS.gene25181:intron | 25.0% |
| !!! | CTCAATCTTGTTCTTTTTTA+AGG | - | chr1.3:17364071-17364090 | None:intergenic | 25.0% |
| !!! | TATATTTGTTGATTTTGGAG+TGG | + | chr1.3:17363683-17363702 | MS.gene25181:intron | 25.0% |
| !!! | TCGTAAATTTCAAAAGTACT+AGG | + | chr1.3:17363946-17363965 | MS.gene25181:intron | 25.0% |
| !!! | TTTGATTTTAAGGGCATTTT+TGG | + | chr1.3:17362576-17362595 | MS.gene25181:intron | 25.0% |
| !!! | TTTGGAACGTTTGATTTTAA+GGG | + | chr1.3:17362567-17362586 | MS.gene25181:intron | 25.0% |
| AAAGAAAAGCGAACAAAAGT+GGG | + | chr1.3:17362338-17362357 | MS.gene25181:intron | 30.0% | |
| AATATCAAACAATGAGGAGA+AGG | + | chr1.3:17364554-17364573 | MS.gene25181:CDS | 30.0% | |
| AATTGTTCAATGGAAACCAA+TGG | + | chr1.3:17364736-17364755 | MS.gene25181:intron | 30.0% | |
| ACACTACATACATGAAAGTA+GGG | + | chr1.3:17363048-17363067 | MS.gene25181:intron | 30.0% | |
| CAATCAATCTCATCAAAACT+TGG | - | chr1.3:17361944-17361963 | None:intergenic | 30.0% | |
| CTTAAAATCAAACGTTCCAA+AGG | - | chr1.3:17362568-17362587 | None:intergenic | 30.0% | |
| GTTTCATTAGCATTTGTGTA+TGG | + | chr1.3:17363138-17363157 | MS.gene25181:intron | 30.0% | |
| TAAAATCAAACGTTCCAAAG+GGG | - | chr1.3:17362566-17362585 | None:intergenic | 30.0% | |
| TACACTACATACATGAAAGT+AGG | + | chr1.3:17363047-17363066 | MS.gene25181:intron | 30.0% | |
| TATAAATGGACGACCAAAAT+TGG | - | chr1.3:17364008-17364027 | None:intergenic | 30.0% | |
| TGCTAATGAAACTACAAGAT+AGG | - | chr1.3:17363130-17363149 | None:intergenic | 30.0% | |
| TTAGCATTTGTGTATGGAAT+CGG | + | chr1.3:17363144-17363163 | MS.gene25181:intron | 30.0% | |
| TTCAGTGTAATTACAAGTGT+CGG | + | chr1.3:17362211-17362230 | MS.gene25181:intron | 30.0% | |
| TTTGTTGCTGTACTAATGAA+AGG | + | chr1.3:17364234-17364253 | MS.gene25181:intron | 30.0% | |
| ! | AATTGATCACTTCTGAGAAA+TGG | + | chr1.3:17364708-17364727 | MS.gene25181:intron | 30.0% |
| ! | CTTCTTTTAGTACTAAAGGA+TGG | + | chr1.3:17365099-17365118 | MS.gene25181:intron | 30.0% |
| ! | GTCACTTCTTTTAGTACTAA+AGG | + | chr1.3:17365095-17365114 | MS.gene25181:intron | 30.0% |
| !! | CATTTTGAGTGAATATAGGA+AGG | + | chr1.3:17364486-17364505 | MS.gene25181:intron | 30.0% |
| !! | GAAAATTGTAAGTTGGTTTC+TGG | - | chr1.3:17365307-17365326 | None:intergenic | 30.0% |
| !! | TAAACAAAGGGTATTGAAGA+AGG | - | chr1.3:17363766-17363785 | None:intergenic | 30.0% |
| !!! | CTTTGGAACGTTTGATTTTA+AGG | + | chr1.3:17362566-17362585 | MS.gene25181:intron | 30.0% |
| !!! | GCAGTTACTCAATTTTTTCT+AGG | + | chr1.3:17364182-17364201 | MS.gene25181:intron | 30.0% |
| !!! | TATTTGCTGTTTTGCATTTC+AGG | + | chr1.3:17365345-17365364 | MS.gene25181:intron | 30.0% |
| !!! | TATTTTTTCTAGAAGAGCTC+AGG | - | chr1.3:17365275-17365294 | None:intergenic | 30.0% |
| !!! | TCTTGTTCTTTTTTAAGGAC+TGG | - | chr1.3:17364066-17364085 | None:intergenic | 30.0% |
| !!! | TTCTTTTTTAAGGACTGGTT+GGG | - | chr1.3:17364061-17364080 | None:intergenic | 30.0% |
| AAAAACGTGAGAAGAGAAAG+TGG | + | chr1.3:17362097-17362116 | MS.gene25181:intron | 35.0% | |
| AAAACGTGAGAAGAGAAAGT+GGG | + | chr1.3:17362098-17362117 | MS.gene25181:intron | 35.0% | |
| AAAATCAAACGTTCCAAAGG+GGG | - | chr1.3:17362565-17362584 | None:intergenic | 35.0% | |
| AATAGAAAATCAGGGACCAT+TGG | - | chr1.3:17364755-17364774 | None:intergenic | 35.0% | |
| ACATCGAGGTTACAACTTTA+TGG | + | chr1.3:17365006-17365025 | MS.gene25181:intron | 35.0% | |
| AGAGAATACCTAACAACTAG+TGG | + | chr1.3:17363790-17363809 | MS.gene25181:intron | 35.0% | |
| AGGAACTTTGTTGAAGATGT+AGG | + | chr1.3:17365249-17365268 | MS.gene25181:intron | 35.0% | |
| AGTCCATTAATTGCTACCAA+AGG | + | chr1.3:17364089-17364108 | MS.gene25181:intron | 35.0% | |
| ATAGAGAATAGCAATGATGC+AGG | - | chr1.3:17364381-17364400 | None:intergenic | 35.0% | |
| ATGCGAATCAATAAATACCG+GGG | + | chr1.3:17363414-17363433 | MS.gene25181:CDS | 35.0% | |
| ATTAACATGCATTAGCAGCA+AGG | - | chr1.3:17363271-17363290 | None:intergenic | 35.0% | |
| CATACAGATGCGGTTATAAA+TGG | - | chr1.3:17364022-17364041 | None:intergenic | 35.0% | |
| CATTTATAACCGCATCTGTA+TGG | + | chr1.3:17364020-17364039 | MS.gene25181:intron | 35.0% | |
| CGATGCGAATCAATAAATAC+CGG | + | chr1.3:17363412-17363431 | MS.gene25181:CDS | 35.0% | |
| GAAAGAAAAGCGAACAAAAG+TGG | + | chr1.3:17362337-17362356 | MS.gene25181:intron | 35.0% | |
| GAGAGATAAAATTGGTCCTT+TGG | - | chr1.3:17364108-17364127 | None:intergenic | 35.0% | |
| GATGCGAATCAATAAATACC+GGG | + | chr1.3:17363413-17363432 | MS.gene25181:CDS | 35.0% | |
| GTGTAAAAAATTCATGGTGC+AGG | - | chr1.3:17363032-17363051 | None:intergenic | 35.0% | |
| GTTCACTTATGTTGGAATCT+GGG | + | chr1.3:17362451-17362470 | MS.gene25181:intron | 35.0% | |
| TAGAGAATAGCAATGATGCA+GGG | - | chr1.3:17364380-17364399 | None:intergenic | 35.0% | |
| TGCATGAAGAATGGAAATGA+TGG | - | chr1.3:17365432-17365451 | None:intergenic | 35.0% | |
| TTGAGTTAAACAAACAACGG+CGG | + | chr1.3:17364929-17364948 | MS.gene25181:intron | 35.0% | |
| ! | AATACTTTTACCTGAGGATG+CGG | + | chr1.3:17364641-17364660 | MS.gene25181:CDS | 35.0% |
| ! | AATTGAGTAACTGCCCATTT+TGG | - | chr1.3:17364176-17364195 | None:intergenic | 35.0% |
| ! | ACGTGCTTTGAATGCTATTA+CGG | + | chr1.3:17362633-17362652 | MS.gene25181:intron | 35.0% |
| ! | ATTCTAGGGGTTTCAAATGA+AGG | - | chr1.3:17362541-17362560 | None:intergenic | 35.0% |
| ! | GTGTTTTGTACATGTTGTCT+TGG | + | chr1.3:17361532-17361551 | MS.gene25181:CDS | 35.0% |
| ! | GTTTTTGAATCTTTACAGGC+TGG | + | chr1.3:17364265-17364284 | MS.gene25181:intron | 35.0% |
| ! | TCTTGATCAAAGGCCAATTT+TGG | + | chr1.3:17363992-17364011 | MS.gene25181:intron | 35.0% |
| ! | TGAACGAATACTTTTACCTG+AGG | + | chr1.3:17364635-17364654 | MS.gene25181:CDS | 35.0% |
| ! | TGTTTTCATGCATGTGAATC+TGG | + | chr1.3:17364805-17364824 | MS.gene25181:intron | 35.0% |
| ! | TTTTAGTACTAAAGGATGGG+AGG | + | chr1.3:17365103-17365122 | MS.gene25181:intron | 35.0% |
| !! | AGCTTGTCTTGTTTCTTTGA+GGG | + | chr1.3:17362666-17362685 | MS.gene25181:intron | 35.0% |
| !! | ATTTATTGATTCGCATCGCT+TGG | - | chr1.3:17363410-17363429 | None:intergenic | 35.0% |
| !! | TAAATTTTGAAGGCACATCG+AGG | + | chr1.3:17364992-17365011 | MS.gene25181:intron | 35.0% |
| !!! | GTTCTTTTTTAAGGACTGGT+TGG | - | chr1.3:17364062-17364081 | None:intergenic | 35.0% |
| AACAATGAGGAGAAGGATAG+TGG | + | chr1.3:17364561-17364580 | MS.gene25181:CDS | 40.0% | |
| AATGAAGGATGTTCGCTGTT+TGG | - | chr1.3:17362526-17362545 | None:intergenic | 40.0% | |
| AATGCTATTACGGCTAGTGT+TGG | + | chr1.3:17362643-17362662 | MS.gene25181:intron | 40.0% | |
| ACTATGGCACACTTGGAAAA+AGG | + | chr1.3:17363215-17363234 | MS.gene25181:intron | 40.0% | |
| ACTGCAAAAATGAATCCTGC+TGG | + | chr1.3:17362845-17362864 | MS.gene25181:intron | 40.0% | |
| AGAAAGTGGGCAAAAGAGAT+AGG | + | chr1.3:17362111-17362130 | MS.gene25181:intron | 40.0% | |
| AGAATGGAAATGATGGTTGC+AGG | - | chr1.3:17365425-17365444 | None:intergenic | 40.0% | |
| AGCTCTACTCCATCTTCATA+TGG | - | chr1.3:17365391-17365410 | None:intergenic | 40.0% | |
| ATATAGTGCAAGTGATGCGA+TGG | - | chr1.3:17362906-17362925 | None:intergenic | 40.0% | |
| ATCTGTTCTTGTCCGTGAAA+CGG | + | chr1.3:17361334-17361353 | MS.gene25181:CDS | 40.0% | |
| ATTCAAAGCACGTGACAAGA+GGG | - | chr1.3:17362626-17362645 | None:intergenic | 40.0% | |
| ATTTCACAACTGCTAGGTCT+TGG | - | chr1.3:17362879-17362898 | None:intergenic | 40.0% | |
| CATGTGAATCTGGTCATCAA+TGG | + | chr1.3:17364815-17364834 | MS.gene25181:intron | 40.0% | |
| GAATGGAAATGATGGTTGCA+GGG | - | chr1.3:17365424-17365443 | None:intergenic | 40.0% | |
| GATTGGAAGACAATTAGTGC+TGG | + | chr1.3:17362393-17362412 | MS.gene25181:intron | 40.0% | |
| GGCAAAATTTCACAACTGCT+AGG | - | chr1.3:17362885-17362904 | None:intergenic | 40.0% | |
| GGTACTATGAAGCACAAAGA+CGG | + | chr1.3:17362132-17362151 | MS.gene25181:intron | 40.0% | |
| GGTTCACTTATGTTGGAATC+TGG | + | chr1.3:17362450-17362469 | MS.gene25181:intron | 40.0% | |
| TATTCTCAAGGGAAACGAAC+AGG | + | chr1.3:17365501-17365520 | MS.gene25181:CDS | 40.0% | |
| TCTACCTATCCTATGAAGCA+CGG | - | chr1.3:17362289-17362308 | None:intergenic | 40.0% | |
| TGAGTTAAACAAACAACGGC+GGG | + | chr1.3:17364930-17364949 | MS.gene25181:intron | 40.0% | |
| TGCCAAAACAACACAGAAGA+TGG | - | chr1.3:17364324-17364343 | None:intergenic | 40.0% | |
| TGCTATTCTCTATGCTGTTG+CGG | + | chr1.3:17364388-17364407 | MS.gene25181:CDS | 40.0% | |
| TGCTTCATAGGATAGGTAGA+GGG | + | chr1.3:17362289-17362308 | MS.gene25181:intron | 40.0% | |
| TTGTACATGTTGTCTTGGTG+TGG | + | chr1.3:17361537-17361556 | MS.gene25181:CDS | 40.0% | |
| TTGTCTTCCAATCACCACTT+CGG | - | chr1.3:17362386-17362405 | None:intergenic | 40.0% | |
| ! | ATAGACACACGTGCATTTTC+AGG | - | chr1.3:17363654-17363673 | None:intergenic | 40.0% |
| ! | CACGTTTTTCTTTCACTCTC+AGG | - | chr1.3:17362086-17362105 | None:intergenic | 40.0% |
| ! | GGTCCTTTGGTAGCAATTAA+TGG | - | chr1.3:17364095-17364114 | None:intergenic | 40.0% |
| ! | TATGCACTGGTGGTTTCTAT+GGG | - | chr1.3:17364606-17364625 | None:intergenic | 40.0% |
| !! | CTTGTCTTGTTTCTTTGAGG+GGG | + | chr1.3:17362668-17362687 | MS.gene25181:intron | 40.0% |
| !! | GAGCTTGTCTTGTTTCTTTG+AGG | + | chr1.3:17362665-17362684 | MS.gene25181:intron | 40.0% |
| !! | GCTTGTCTTGTTTCTTTGAG+GGG | + | chr1.3:17362667-17362686 | MS.gene25181:intron | 40.0% |
| !! | GTAATTACAAGTGTCGGTGT+CGG | + | chr1.3:17362217-17362236 | MS.gene25181:intron | 40.0% |
| !!! | GTTGTTTTGGCATGCTTGAT+CGG | + | chr1.3:17364332-17364351 | MS.gene25181:CDS | 40.0% |
| !!! | TGCCATCTTCTGTGTTGTTT+TGG | + | chr1.3:17364319-17364338 | MS.gene25181:CDS | 40.0% |
| AAAACGTCCGATGATAGTCG+TGG | - | chr1.3:17363107-17363126 | None:intergenic | 45.0% | |
| AAAGCTTACCAGTACAAGCG+TGG | - | chr1.3:17363511-17363530 | None:intergenic | 45.0% | |
| AACGATAGTGATGACAGCGA+TGG | + | chr1.3:17361638-17361657 | MS.gene25181:CDS | 45.0% | |
| AATCTGGGCCGTGTGAATTA+TGG | + | chr1.3:17362466-17362485 | MS.gene25181:intron | 45.0% | |
| ACATCGGATAATGCGAGGAA+TGG | - | chr1.3:17363183-17363202 | None:intergenic | 45.0% | |
| AGAAACCACCAGTGCATACT+TGG | + | chr1.3:17364608-17364627 | MS.gene25181:CDS | 45.0% | |
| ATACCGGGGTTTCATTCCTT+TGG | + | chr1.3:17363428-17363447 | MS.gene25181:CDS | 45.0% | |
| CATGGCGTTCGTTGTTGTAT+CGG | + | chr1.3:17361433-17361452 | MS.gene25181:CDS | 45.0% | |
| CATTCAAAGCACGTGACAAG+AGG | - | chr1.3:17362627-17362646 | None:intergenic | 45.0% | |
| CGCAGCTTCCATAATTCACA+CGG | - | chr1.3:17362477-17362496 | None:intergenic | 45.0% | |
| CTATCATTGAGAAGCTCTGC+CGG | + | chr1.3:17362990-17363009 | MS.gene25181:intron | 45.0% | |
| CTCCATCTTCATATGGACAG+AGG | - | chr1.3:17365384-17365403 | None:intergenic | 45.0% | |
| GATGCTGAATTCAGTTCCGA+CGG | + | chr1.3:17361614-17361633 | MS.gene25181:CDS | 45.0% | |
| GCAGAGCTTCTCAATGATAG+GGG | - | chr1.3:17362990-17363009 | None:intergenic | 45.0% | |
| GCAGCAAGGTCATTTAGAAG+AGG | - | chr1.3:17363257-17363276 | None:intergenic | 45.0% | |
| GCGCTTGAGTCTACATAAGT+AGG | - | chr1.3:17363591-17363610 | None:intergenic | 45.0% | |
| GCTATTCTCTATGCTGTTGC+GGG | + | chr1.3:17364389-17364408 | MS.gene25181:CDS | 45.0% | |
| GGAACTAGCCACTAGTTGTT+AGG | - | chr1.3:17363801-17363820 | None:intergenic | 45.0% | |
| GGCAGAGCTTCTCAATGATA+GGG | - | chr1.3:17362991-17363010 | None:intergenic | 45.0% | |
| GGTTTCATTCCTTTGGTGGA+TGG | + | chr1.3:17363435-17363454 | MS.gene25181:CDS | 45.0% | |
| GTCATCACTATCGTTACCGT+CGG | - | chr1.3:17361633-17361652 | None:intergenic | 45.0% | |
| GTGCTTCATAGGATAGGTAG+AGG | + | chr1.3:17362288-17362307 | MS.gene25181:intron | 45.0% | |
| GTTCCAAAGGGGGAATTCTA+GGG | - | chr1.3:17362555-17362574 | None:intergenic | 45.0% | |
| GTTTCACGGACAAGAACAGA+TGG | - | chr1.3:17361335-17361354 | None:intergenic | 45.0% | |
| TGCCTCTGTCCATATGAAGA+TGG | + | chr1.3:17365379-17365398 | MS.gene25181:CDS | 45.0% | |
| TGTCTTCCAATCACCACTTC+GGG | - | chr1.3:17362385-17362404 | None:intergenic | 45.0% | |
| TTCAGTTGCCAAGTATGCAC+TGG | - | chr1.3:17364619-17364638 | None:intergenic | 45.0% | |
| TTCCAAAGGGGGAATTCTAG+GGG | - | chr1.3:17362554-17362573 | None:intergenic | 45.0% | |
| TTGAGTATCACCGCCGTAAT+CGG | + | chr1.3:17361561-17361580 | MS.gene25181:CDS | 45.0% | |
| ! | AATGAGGAGAAGGATAGTGG+TGG | + | chr1.3:17364564-17364583 | MS.gene25181:CDS | 45.0% |
| ! | GAGAGCATATGTGACACTGA+GGG | + | chr1.3:17364137-17364156 | MS.gene25181:intron | 45.0% |
| ! | GCTATTTGTACCGGTGCTTA+AGG | + | chr1.3:17363626-17363645 | MS.gene25181:intron | 45.0% |
| ! | GGAGTCTGGTTCACTTATGT+TGG | + | chr1.3:17362443-17362462 | MS.gene25181:intron | 45.0% |
| ! | GTATGCACTGGTGGTTTCTA+TGG | - | chr1.3:17364607-17364626 | None:intergenic | 45.0% |
| ! | TCATTCCTTTGGTGGATGGT+GGG | + | chr1.3:17363439-17363458 | MS.gene25181:CDS | 45.0% |
| ! | TTCATTCCTTTGGTGGATGG+TGG | + | chr1.3:17363438-17363457 | MS.gene25181:CDS | 45.0% |
| !! | CAGGCTGGCTGTTATCTTTT+TGG | + | chr1.3:17364280-17364299 | MS.gene25181:intron | 45.0% |
| !! | TTTTCAGGCACCTTAAGCAC+CGG | - | chr1.3:17363639-17363658 | None:intergenic | 45.0% |
| AAAAGCCCACCATCCACCAA+AGG | - | chr1.3:17363447-17363466 | None:intergenic | 50.0% | |
| AACAAAAGTGGGCAGACGAG+TGG | + | chr1.3:17362349-17362368 | MS.gene25181:intron | 50.0% | |
| AACAGATGGTCCTCTTCGTC+CGG | - | chr1.3:17361321-17361340 | None:intergenic | 50.0% | |
| AACCCCTAGAATTCCCCCTT+TGG | + | chr1.3:17362549-17362568 | MS.gene25181:intron | 50.0% | |
| AACCGCATCTGTATGGTCCT+TGG | + | chr1.3:17364027-17364046 | MS.gene25181:intron | 50.0% | |
| AAGAAGCCCGAAGTGGTGAT+TGG | + | chr1.3:17362376-17362395 | MS.gene25181:intron | 50.0% | |
| AAGATGCTCCACGCTTGTAC+TGG | + | chr1.3:17363500-17363519 | MS.gene25181:CDS | 50.0% | |
| ACGTGAATTCGTCTCAGTCC+AGG | + | chr1.3:17361663-17361682 | MS.gene25181:CDS | 50.0% | |
| AGGTAGAGGGAGACTAGAGA+GGG | + | chr1.3:17362302-17362321 | MS.gene25181:intron | 50.0% | |
| AGTTGCCAAGTATGCACTGG+TGG | - | chr1.3:17364616-17364635 | None:intergenic | 50.0% | |
| ATGTCCGCAGAACTGGACTA+TGG | + | chr1.3:17363199-17363218 | MS.gene25181:intron | 50.0% | |
| CATGTTCGGATGCTCGTCAA+CGG | - | chr1.3:17361477-17361496 | None:intergenic | 50.0% | |
| CCACCAAAGGAATGAAACCC+CGG | - | chr1.3:17363434-17363453 | None:intergenic | 50.0% | |
| CGCTCACATCATGAAGGCAA+CGG | + | chr1.3:17361248-17361267 | MS.gene25181:CDS | 50.0% | |
| CGGCAGAGCTTCTCAATGAT+AGG | - | chr1.3:17362992-17363011 | None:intergenic | 50.0% | |
| CGTAACCTACGATCCAAACG+CGG | - | chr1.3:17361505-17361524 | None:intergenic | 50.0% | |
| CGTTCCAAAGGGGGAATTCT+AGG | - | chr1.3:17362556-17362575 | None:intergenic | 50.0% | |
| CGTTGCCTTCATGATGTGAG+CGG | - | chr1.3:17361250-17361269 | None:intergenic | 50.0% | |
| CTCCAAGGACCATACAGATG+CGG | - | chr1.3:17364032-17364051 | None:intergenic | 50.0% | |
| CTGCGTGTGACTACTGTGTA+TGG | + | chr1.3:17362492-17362511 | MS.gene25181:intron | 50.0% | |
| CTTCTCCGCTCACATCATGA+AGG | + | chr1.3:17361242-17361261 | MS.gene25181:CDS | 50.0% | |
| GAAAAGTCGCTCAGCAAGCT+TGG | + | chr1.3:17362418-17362437 | MS.gene25181:intron | 50.0% | |
| GAACTGGACTATGGCACACT+TGG | + | chr1.3:17363208-17363227 | MS.gene25181:intron | 50.0% | |
| GATGGTTGCAGGGAAGAGTA+TGG | - | chr1.3:17365414-17365433 | None:intergenic | 50.0% | |
| GCTCGACATGTCATGGAACA+TGG | + | chr1.3:17361415-17361434 | MS.gene25181:CDS | 50.0% | |
| GGAAATCATACCGCATCCTC+AGG | - | chr1.3:17364654-17364673 | None:intergenic | 50.0% | |
| GGGCTATCCACGACTATCAT+CGG | + | chr1.3:17363097-17363116 | MS.gene25181:intron | 50.0% | |
| GTGTCCGTGCTTCATAGGAT+AGG | + | chr1.3:17362282-17362301 | MS.gene25181:intron | 50.0% | |
| GTTACGCGCAGCTACATCAA+GGG | + | chr1.3:17363076-17363095 | MS.gene25181:intron | 50.0% | |
| TAGGTAGAGGGAGACTAGAG+AGG | + | chr1.3:17362301-17362320 | MS.gene25181:intron | 50.0% | |
| TAGTCCAGTTCTGCGGACAT+CGG | - | chr1.3:17363199-17363218 | None:intergenic | 50.0% | |
| TATGAAGCACGGACACTCCT+CGG | - | chr1.3:17362278-17362297 | None:intergenic | 50.0% | |
| TCACATCATGAAGGCAACGG+CGG | + | chr1.3:17361251-17361270 | MS.gene25181:CDS | 50.0% | |
| TCATGATGTGAGCGGAGAAG+CGG | - | chr1.3:17361242-17361261 | None:intergenic | 50.0% | |
| TGGCTTCGAGTATCCCCAAT+CGG | - | chr1.3:17361387-17361406 | None:intergenic | 50.0% | |
| TGTGCCATAGTCCAGTTCTG+CGG | - | chr1.3:17363206-17363225 | None:intergenic | 50.0% | |
| TGTTACGCGCAGCTACATCA+AGG | + | chr1.3:17363075-17363094 | MS.gene25181:intron | 50.0% | |
| TGTTCTTGTCCGTGAAACGG+CGG | + | chr1.3:17361337-17361356 | MS.gene25181:CDS | 50.0% | |
| TTACGCGCAGCTACATCAAG+GGG | + | chr1.3:17363077-17363096 | MS.gene25181:intron | 50.0% | |
| TTATCCGATGTCCGCAGAAC+TGG | + | chr1.3:17363192-17363211 | MS.gene25181:intron | 50.0% | |
| TTGTAGCGCTCGACATGTCA+TGG | + | chr1.3:17361408-17361427 | MS.gene25181:CDS | 50.0% | |
| ! | GGAGAGCATATGTGACACTG+AGG | + | chr1.3:17364136-17364155 | MS.gene25181:intron | 50.0% |
| ! | GGCTTTTACTGGGTTGTCTC+TGG | + | chr1.3:17363460-17363479 | MS.gene25181:CDS | 50.0% |
| ! | TAGTGGTGGAGCTGGATCAA+TGG | + | chr1.3:17364578-17364597 | MS.gene25181:CDS | 50.0% |
| !! | GTCTTGGTATCGATTCCAGC+AGG | - | chr1.3:17362863-17362882 | None:intergenic | 50.0% |
| !!! | GTGGATGGTGGGCTTTTACT+GGG | + | chr1.3:17363450-17363469 | MS.gene25181:CDS | 50.0% |
| AAAAGTGGGCAGACGAGTGG+AGG | + | chr1.3:17362352-17362371 | MS.gene25181:intron | 55.0% | |
| ACTTCCCTCGCTCAGCTTCT+CGG | + | chr1.3:17361287-17361306 | MS.gene25181:CDS | 55.0% | |
| AGGCGTGCAGCTGTAATCAC+CGG | - | chr1.3:17363012-17363031 | None:intergenic | 55.0% | |
| AGTATCACCGCCGTAATCGG+AGG | + | chr1.3:17361564-17361583 | MS.gene25181:CDS | 55.0% | |
| AGTCGCTCAGCAAGCTTGGT+CGG | + | chr1.3:17362422-17362441 | MS.gene25181:intron | 55.0% | |
| CAAACGCGGATCGGCATGTT+CGG | - | chr1.3:17361491-17361510 | None:intergenic | 55.0% | |
| CACAAAGACGGACACGACAC+AGG | + | chr1.3:17362144-17362163 | MS.gene25181:intron | 55.0% | |
| CCGGGGTTTCATTCCTTTGG+TGG | + | chr1.3:17363431-17363450 | MS.gene25181:CDS | 55.0% | |
| CCTACGATCCAAACGCGGAT+CGG | - | chr1.3:17361500-17361519 | None:intergenic | 55.0% | |
| GAAGCTGAGCGAGGGAAGTA+CGG | - | chr1.3:17361286-17361305 | None:intergenic | 55.0% | |
| GACATGTCGAGCGCTACAAC+TGG | - | chr1.3:17361407-17361426 | None:intergenic | 55.0% | |
| GATGTAGCTGCGCGTAACAC+AGG | - | chr1.3:17363074-17363093 | None:intergenic | 55.0% | |
| GCGAGGAATGGCACTATCAG+TGG | - | chr1.3:17363171-17363190 | None:intergenic | 55.0% | |
| GGCGTTCGTTGTTGTATCGG+CGG | + | chr1.3:17361436-17361455 | MS.gene25181:CDS | 55.0% | |
| GTAATCGGAGGGATTCGCGA+CGG | + | chr1.3:17361576-17361595 | MS.gene25181:CDS | 55.0% | |
| GTATCACCGCCGTAATCGGA+GGG | + | chr1.3:17361565-17361584 | MS.gene25181:CDS | 55.0% | |
| GTCGCGAATCCCTCCGATTA+CGG | - | chr1.3:17361577-17361596 | None:intergenic | 55.0% | |
| TCTCTATGCTGTTGCGGGAC+AGG | + | chr1.3:17364394-17364413 | MS.gene25181:CDS | 55.0% | |
| TGCGGACATCGGATAATGCG+AGG | - | chr1.3:17363188-17363207 | None:intergenic | 55.0% | |
| TGGAGGAAAGAAGCCCGAAG+TGG | + | chr1.3:17362369-17362388 | MS.gene25181:intron | 55.0% | |
| ! | AGCGTGGAGCATCTTGCAGA+AGG | - | chr1.3:17363495-17363514 | None:intergenic | 55.0% |
| ! | CTGGTTGGGTTGTCACTCCA+AGG | - | chr1.3:17364047-17364066 | None:intergenic | 55.0% |
| ! | GAGAAGGATAGTGGTGGAGC+TGG | + | chr1.3:17364570-17364589 | MS.gene25181:CDS | 55.0% |
| ! | TCGAAGAACGTCGTGCCGAT+TGG | + | chr1.3:17361369-17361388 | MS.gene25181:CDS | 55.0% |
| !! | CGAAGAACGTCGTGCCGATT+GGG | + | chr1.3:17361370-17361389 | MS.gene25181:CDS | 55.0% |
| !! | GAAGAACGTCGTGCCGATTG+GGG | + | chr1.3:17361371-17361390 | MS.gene25181:CDS | 55.0% |
| !! | GAGGAGTGTCCGTGCTTCAT+AGG | + | chr1.3:17362277-17362296 | MS.gene25181:intron | 55.0% |
| !!! | GGTGGATGGTGGGCTTTTAC+TGG | + | chr1.3:17363449-17363468 | MS.gene25181:CDS | 55.0% |
| ACACGACACGTGTCCGACAC+CGG | + | chr1.3:17362240-17362259 | MS.gene25181:intron | 60.0% | |
| AGATGGTCCTCTTCGTCCGG+TGG | - | chr1.3:17361318-17361337 | None:intergenic | 60.0% | |
| CAGCAAGCTTGGTCGGAGTC+TGG | + | chr1.3:17362429-17362448 | MS.gene25181:intron | 60.0% | |
| CATCATGAAGGCAACGGCGG+TGG | + | chr1.3:17361254-17361273 | MS.gene25181:CDS | 60.0% | |
| CCGATCCGCGTTTGGATCGT+AGG | + | chr1.3:17361497-17361516 | MS.gene25181:CDS | 60.0% | |
| CGAACATGCCGATCCGCGTT+TGG | + | chr1.3:17361489-17361508 | MS.gene25181:CDS | 60.0% | |
| GATTAGGCGTGTCCCGGTGT+CGG | - | chr1.3:17362256-17362275 | None:intergenic | 60.0% | |
| GCACGGACACTCCTCGGATT+AGG | - | chr1.3:17362272-17362291 | None:intergenic | 60.0% | |
| GCGAATCCCTCCGATTACGG+CGG | - | chr1.3:17361574-17361593 | None:intergenic | 60.0% | |
| GGGGCAGTCTTTACTCCACC+AGG | - | chr1.3:17362971-17362990 | None:intergenic | 60.0% | |
| ! | TCCTCGGATTAGGCGTGTCC+CGG | - | chr1.3:17362262-17362281 | None:intergenic | 60.0% |
| ACCGGGACACGCCTAATCCG+AGG | + | chr1.3:17362258-17362277 | MS.gene25181:intron | 65.0% | |
| ATCGGAGGGATTCGCGACGG+AGG | + | chr1.3:17361579-17361598 | MS.gene25181:CDS | 65.0% | |
| CACGACACGTGTCCGACACC+GGG | + | chr1.3:17362241-17362260 | MS.gene25181:intron | 65.0% | |
| CATGAAGGCAACGGCGGTGG+CGG | + | chr1.3:17361257-17361276 | MS.gene25181:CDS | 65.0% | |
| GAGCGGAGAAGCGGTGTCTG+TGG | - | chr1.3:17361233-17361252 | None:intergenic | 65.0% | |
| GCGTCCGAGAAGCTGAGCGA+GGG | - | chr1.3:17361294-17361313 | None:intergenic | 65.0% | |
| GGATTCGCGACGGAGGCAGA+GGG | + | chr1.3:17361586-17361605 | MS.gene25181:CDS | 65.0% | |
| GTTCACGCGCCGCCGTTTCA+CGG | - | chr1.3:17361349-17361368 | None:intergenic | 65.0% | |
| ! | GCTGAGCGAGGGAAGTACGG+CGG | - | chr1.3:17361283-17361302 | None:intergenic | 65.0% |
| CAGCTTCTCGGACGCGCCAC+CGG | + | chr1.3:17361299-17361318 | MS.gene25181:CDS | 70.0% | |
| CGCGTCCGAGAAGCTGAGCG+AGG | - | chr1.3:17361295-17361314 | None:intergenic | 70.0% | |
| GGGATTCGCGACGGAGGCAG+AGG | + | chr1.3:17361585-17361604 | MS.gene25181:CDS | 70.0% | |
| GGACGCGCCACCGGACGAAG+AGG | + | chr1.3:17361308-17361327 | MS.gene25181:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 17361203 | 17365528 | 17361203 | ID=MS.gene25181 |
| chr1.3 | mRNA | 17361203 | 17365528 | 17361203 | ID=MS.gene25181.t1;Parent=MS.gene25181 |
| chr1.3 | exon | 17361203 | 17361684 | 17361203 | ID=MS.gene25181.t1.exon1;Parent=MS.gene25181.t1 |
| chr1.3 | CDS | 17361203 | 17361684 | 17361203 | ID=cds.MS.gene25181.t1;Parent=MS.gene25181.t1 |
| chr1.3 | exon | 17363402 | 17363521 | 17363402 | ID=MS.gene25181.t1.exon2;Parent=MS.gene25181.t1 |
| chr1.3 | CDS | 17363402 | 17363521 | 17363402 | ID=cds.MS.gene25181.t1;Parent=MS.gene25181.t1 |
| chr1.3 | exon | 17364283 | 17364415 | 17364283 | ID=MS.gene25181.t1.exon3;Parent=MS.gene25181.t1 |
| chr1.3 | CDS | 17364283 | 17364415 | 17364283 | ID=cds.MS.gene25181.t1;Parent=MS.gene25181.t1 |
| chr1.3 | exon | 17364504 | 17364662 | 17364504 | ID=MS.gene25181.t1.exon4;Parent=MS.gene25181.t1 |
| chr1.3 | CDS | 17364504 | 17364662 | 17364504 | ID=cds.MS.gene25181.t1;Parent=MS.gene25181.t1 |
| chr1.3 | exon | 17365367 | 17365528 | 17365367 | ID=MS.gene25181.t1.exon5;Parent=MS.gene25181.t1 |
| chr1.3 | CDS | 17365367 | 17365528 | 17365367 | ID=cds.MS.gene25181.t1;Parent=MS.gene25181.t1 |
| Gene Sequence |
| Protein sequence |
