AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene25841

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene25841.t1 MTR_3g079750 98.565 627 9 0 1 627 1 627 0.0 1276
MS.gene25841.t1 MTR_6g028090 77.170 622 142 0 1 622 1 622 0.0 1020
MS.gene25841.t1 MTR_6g028100 75.719 626 152 0 1 626 1 626 0.0 1006
MS.gene25841.t1 MTR_6g028120 76.783 603 140 0 20 622 1 603 0.0 983
MS.gene25841.t1 MTR_2g030000 73.836 623 159 2 4 622 2 624 0.0 976
MS.gene25841.t1 MTR_6g028110 74.003 627 162 1 1 626 1 627 0.0 976
MS.gene25841.t1 MTR_6g028110 74.003 627 162 1 1 626 1 627 0.0 974
MS.gene25841.t1 MTR_7g086030 68.581 627 196 1 1 626 1 627 0.0 911
MS.gene25841.t1 MTR_7g086030 70.167 600 179 0 27 626 3 602 0.0 907
MS.gene25841.t1 MTR_3g462820 57.756 606 243 4 22 620 16 615 0.0 719
MS.gene25841.t1 MTR_5g069800 54.667 600 267 4 28 623 5 603 0.0 679
MS.gene25841.t1 MTR_5g069740 54.333 600 257 5 28 623 5 591 0.0 663
MS.gene25841.t1 MTR_7g086010 64.346 474 156 3 1 463 1 472 0.0 613
MS.gene25841.t1 MTR_5g062650 26.462 650 358 26 37 627 59 647 1.76e-41 161
MS.gene25841.t1 MTR_5g062370 28.154 650 348 28 35 627 57 644 3.16e-41 160
MS.gene25841.t1 MTR_3g074060 25.970 670 375 28 16 627 30 636 3.82e-41 160
MS.gene25841.t1 MTR_5g062320 26.953 653 352 28 35 627 55 642 3.52e-40 157
MS.gene25841.t1 MTR_4g094285 27.127 623 352 26 28 612 54 612 9.84e-40 155
MS.gene25841.t1 MTR_5g062430 26.677 656 350 28 35 627 57 644 2.87e-39 154
MS.gene25841.t1 MTR_5g062370 28.353 589 322 25 35 584 57 584 1.72e-37 147
MS.gene25841.t1 MTR_2g008240 26.122 624 357 26 28 612 55 613 3.00e-34 139
MS.gene25841.t1 MTR_2g034720 24.556 676 380 29 11 621 11 621 1.75e-33 137
MS.gene25841.t1 MTR_7g109390 25.418 598 348 27 32 595 46 579 5.94e-30 126
MS.gene25841.t1 MTR_1g106860 25.352 639 361 30 38 621 48 625 1.95e-29 124
MS.gene25841.t1 MTR_5g030860 25.532 564 351 28 97 612 66 608 4.13e-27 117
MS.gene25841.t1 MTR_1g087240 23.511 638 370 28 8 595 5 574 5.48e-25 110
MS.gene25841.t1 MTR_5g069850 58.333 48 20 0 554 601 4 51 3.16e-15 70.9
MS.gene25841.t1 MTR_3g079770 89.655 29 3 0 598 626 12 40 3.93e-12 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene25841.t1 AT5G20950 77.724 615 135 2 8 622 85 697 0.0 984
MS.gene25841.t1 AT5G20950 77.724 615 135 2 8 622 7 619 0.0 983
MS.gene25841.t1 AT5G20950 77.724 615 135 2 8 622 7 619 0.0 983
MS.gene25841.t1 AT5G04885 67.788 624 198 3 1 622 18 640 0.0 916
MS.gene25841.t1 AT5G04885 67.788 624 198 3 1 622 1 623 0.0 916
MS.gene25841.t1 AT5G04885 67.788 624 198 3 1 622 1 623 0.0 916
MS.gene25841.t1 AT5G20940 75.839 596 141 2 27 622 31 623 0.0 907
MS.gene25841.t1 AT3G47000 58.961 597 242 3 28 622 10 605 0.0 741
MS.gene25841.t1 AT3G47040 58.403 601 247 3 28 626 10 609 0.0 730
MS.gene25841.t1 AT3G62710 56.250 656 242 12 1 622 6 650 0.0 719
MS.gene25841.t1 AT3G47010 57.429 599 252 3 28 624 11 608 0.0 716
MS.gene25841.t1 AT3G47040 56.340 623 244 4 28 623 10 631 0.0 716
MS.gene25841.t1 AT3G47010 57.095 599 253 4 28 624 11 607 0.0 706
MS.gene25841.t1 AT3G47050 56.303 595 255 4 28 620 10 601 0.0 688
MS.gene25841.t1 AT3G47040 54.358 631 252 7 28 623 10 639 0.0 678
MS.gene25841.t1 AT3G47000 60.599 434 171 0 28 461 10 443 0.0 572
MS.gene25841.t1 AT3G47040 59.908 434 174 0 28 461 10 443 0.0 555
MS.gene25841.t1 AT3G47010 58.756 434 179 0 28 461 11 444 0.0 546
MS.gene25841.t1 AT3G47000 57.343 429 180 3 196 622 1 428 6.04e-176 506
MS.gene25841.t1 AT3G47010 54.756 431 191 4 196 624 1 429 2.40e-164 477
MS.gene25841.t1 AT3G47050 54.987 371 167 0 28 398 10 380 2.53e-149 437
MS.gene25841.t1 AT5G64570 25.191 655 376 27 4 605 16 609 2.28e-36 145
MS.gene25841.t1 AT5G09730 25.653 651 366 27 9 604 11 598 5.38e-36 144
MS.gene25841.t1 AT5G49360 25.844 681 377 31 4 621 12 627 4.11e-35 142
MS.gene25841.t1 AT1G02640 25.116 645 371 27 27 621 43 625 9.06e-34 138
MS.gene25841.t1 AT5G64570 24.726 639 369 26 4 591 16 593 2.04e-32 132
MS.gene25841.t1 AT5G10560 26.930 557 328 26 97 595 66 601 2.16e-32 134
MS.gene25841.t1 AT3G19620 25.909 660 376 31 16 621 27 627 3.80e-31 130
MS.gene25841.t1 AT5G64570 27.101 476 291 21 158 605 4 451 2.21e-30 127
MS.gene25841.t1 AT1G78060 26.368 603 342 27 33 595 43 583 3.14e-29 124

Find 155 sgRNAs with CRISPR-Local

Find 281 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATATGAGGTTTCAATATT+TGG 0.137122 3.2:-70058419 None:intergenic
CTTGGGATTCCAATGATTTA+TGG 0.138672 3.2:+70054998 MS.gene25841:CDS
CTTGTGGCTGCATGGCTTCC+TGG 0.170355 3.2:+70058232 MS.gene25841:CDS
GCATCGTCAATCCTGCTAAT+TGG 0.195190 3.2:-70057210 None:intergenic
AGGAAGTCATGCTGACAATT+TGG 0.215763 3.2:+70057535 MS.gene25841:CDS
AATGAACTCAGTAAAGTTAT+AGG 0.257235 3.2:-70057151 None:intergenic
TGTGTAGTTGTTCTCGTCAC+TGG 0.269250 3.2:+70058166 MS.gene25841:CDS
CCTCTATTTCCATTTGGATT+TGG 0.273183 3.2:+70058379 MS.gene25841:CDS
TGCTGAGACTTGGGTGAAAA+TGG 0.299375 3.2:+70054940 MS.gene25841:CDS
TTGGGATTCCAATGATTTAT+GGG 0.310059 3.2:+70054999 MS.gene25841:CDS
CTTTGAATTCACTGGCAAAC+TGG 0.319753 3.2:+70058294 MS.gene25841:CDS
AAGTACTTGGTCATGGCTTC+AGG 0.324560 3.2:-70054515 None:intergenic
TCAAGAACAAACTGCGGTTC+AGG 0.331109 3.2:+70056782 MS.gene25841:CDS
CTTCTATTCAATGGCACCTT+AGG 0.337123 3.2:-70054413 None:intergenic
TTCCCTCACAATGTTGGGCT+TGG 0.338471 3.2:+70055067 MS.gene25841:CDS
GCCTCAAAAGTCTTGGTTGC+AGG 0.340957 3.2:+70057515 MS.gene25841:CDS
GAGTAGATAAAGCTGCATTT+TGG 0.345290 3.2:-70054973 None:intergenic
TTGTAGACAACTTCAGTTGC+AGG 0.355816 3.2:-70057983 None:intergenic
TTTGATGAGTAGAATGACTT+TGG 0.365060 3.2:+70054445 MS.gene25841:CDS
AAACCTTATGCTGAAACATT+TGG 0.369639 3.2:+70058073 MS.gene25841:CDS
TCACCAAATGTTTCAGCATA+AGG 0.371613 3.2:-70058076 None:intergenic
CATCGTCAATCCTGCTAATT+GGG 0.372190 3.2:-70057209 None:intergenic
AACAAAAGGAGTTCCCTTCC+TGG 0.375958 3.2:-70055600 None:intergenic
TGTTTATCGCCAACATTCAT+TGG 0.380197 3.2:-70058349 None:intergenic
TATGATCCTCTATTTCCATT+TGG 0.381581 3.2:+70058373 MS.gene25841:CDS
GCAGCTTTATCTACTCCTCT+TGG 0.387602 3.2:+70054980 MS.gene25841:CDS
ATGAACTCAGTAAAGTTATA+GGG 0.395590 3.2:-70057150 None:intergenic
GGAAGTCATGCTGACAATTT+GGG 0.395920 3.2:+70057536 MS.gene25841:CDS
TCTAAGTCTCACAAACCAAT+TGG 0.396858 3.2:+70057293 MS.gene25841:CDS
GAGATATTCCTGGCAATTCC+AGG 0.396979 3.2:+70055582 MS.gene25841:CDS
GCCCTTGAAGTTAGAGCTAC+TGG 0.404728 3.2:+70055338 MS.gene25841:CDS
TCTTTGATTCTTCTATTCAA+TGG 0.409302 3.2:-70054422 None:intergenic
CCAAATCCAAATGGAAATAG+AGG 0.410646 3.2:-70058379 None:intergenic
CAGCTTTATCTACTCCTCTT+GGG 0.415243 3.2:+70054981 MS.gene25841:CDS
GTTGAAGCTGGTGTCAGTGC+TGG 0.417130 3.2:+70056992 MS.gene25841:CDS
TTCCAGTAGCTCTAACTTCA+AGG 0.427669 3.2:-70055340 None:intergenic
GAAATTATACCTGGTCTTCA+AGG 0.428354 3.2:+70055560 MS.gene25841:CDS
GACTTGATAAAACTAGCATC+TGG 0.430500 3.2:-70058013 None:intergenic
ATTGTTCTCATTGATACCCT+TGG 0.433255 3.2:-70056611 None:intergenic
AATGTACCTTGCTACCCAAT+TGG 0.438570 3.2:-70057308 None:intergenic
TGTTCTTTACTTGAAAGGTT+AGG 0.439033 3.2:-70057179 None:intergenic
TATGGGATAGATGCTGTTCA+TGG 0.440549 3.2:+70055016 MS.gene25841:CDS
AATATTGTTCTTTACTTGAA+AGG 0.442284 3.2:-70057184 None:intergenic
TTCTTATGCCATAGTTATTG+TGG 0.447834 3.2:+70058045 MS.gene25841:CDS
ATTACTTGGCAGGGACTTAG+TGG 0.448542 3.2:+70057581 MS.gene25841:CDS
GCATCTATCCCATAAATCAT+TGG 0.452813 3.2:-70055007 None:intergenic
CAAGAACAAACTGCGGTTCA+GGG 0.456249 3.2:+70056783 MS.gene25841:CDS
TATGGTGACTTTGAATTCAC+TGG 0.461713 3.2:+70058286 MS.gene25841:CDS
AGGGAGTGTTCCAGCTGAAA+AGG 0.462443 3.2:+70054913 MS.gene25841:CDS
CATGAGGAGGAGAGGTAATC+CGG 0.462465 3.2:-70056952 None:intergenic
TGAGGTTTCAATATTTGGTA+AGG 0.463136 3.2:-70058414 None:intergenic
TGTTCTCGTCACTGGGCGTC+CGG 0.463651 3.2:+70058174 MS.gene25841:CDS
TGCTTCTTTACCGCAATACA+TGG 0.465680 3.2:-70055380 None:intergenic
ATACATGGAGCAAACACATA+TGG 0.466208 3.2:-70055365 None:intergenic
ATCTCCTACACTAGCTGGAA+TGG 0.467244 3.2:+70056718 MS.gene25841:CDS
GTGTAGTTGTTCTCGTCACT+GGG 0.467358 3.2:+70058167 MS.gene25841:CDS
TTCTTGGGAAGGGGAAGCAG+TGG 0.467812 3.2:-70057491 None:intergenic
GCATGGCTTCCTGGCACTGA+AGG 0.468764 3.2:+70058241 MS.gene25841:CDS
AAAAGGCATCTGCTGAGACT+TGG 0.471382 3.2:+70054930 MS.gene25841:CDS
ATACTATGACTCAATTATCA+AGG 0.471567 3.2:+70056678 MS.gene25841:CDS
ACACCTTGGCCTTCAGTGCC+AGG 0.472862 3.2:-70058250 None:intergenic
ATGGTGCTTGGACCTGGCTC+AGG 0.474607 3.2:-70058118 None:intergenic
GGTCTTCAAGGAGATATTCC+TGG 0.478810 3.2:+70055572 MS.gene25841:CDS
ACTTACTTTCCAGCAACAAA+AGG 0.480992 3.2:-70055614 None:intergenic
ACAATATTATCCCAATTAGC+AGG 0.481409 3.2:+70057199 MS.gene25841:CDS
GGTGTTACTGACGTTCTCTA+TGG 0.482539 3.2:+70058268 MS.gene25841:CDS
GAGCAGGGAGTGTGTTGAGT+GGG 0.484068 3.2:+70054888 MS.gene25841:intron
TGTCAGTGCTGGAATTGATA+TGG 0.484901 3.2:+70057003 MS.gene25841:CDS
TTGGTGATGGTGCTTGGACC+TGG 0.485332 3.2:-70058124 None:intergenic
AGCAGGGAGTGTGTTGAGTG+GGG 0.485367 3.2:+70054889 MS.gene25841:intron
GATGAGTAGAATGACTTTGG+AGG 0.485718 3.2:+70054448 MS.gene25841:CDS
CAAGAAAGCCTCAAAAGTCT+TGG 0.487758 3.2:+70057508 MS.gene25841:CDS
TCTTATGCCATAGTTATTGT+GGG 0.491158 3.2:+70058046 MS.gene25841:CDS
CGCCAACATTCATTGGAAGC+TGG 0.492042 3.2:-70058342 None:intergenic
GCCATGACCAAGTACTTCAT+TGG 0.492284 3.2:+70054521 MS.gene25841:CDS
CATACATTGGTGATGGTGCT+TGG 0.492523 3.2:-70058130 None:intergenic
TGGATGGACAATTACTTGGC+AGG 0.494957 3.2:+70057571 MS.gene25841:CDS
CTAAGTCTCACAAACCAATT+GGG 0.498610 3.2:+70057294 MS.gene25841:CDS
AAATCTTCAATCCCTGTAGT+GGG 0.504070 3.2:+70054329 MS.gene25841:CDS
AGTGGTAGTGATCTTACAAC+GGG 0.506662 3.2:+70057599 MS.gene25841:CDS
TCCCTAGTGCTGCTAAAGAA+TGG 0.509354 3.2:+70057452 MS.gene25841:CDS
GTCAAATGACTCAGCTTGAA+AGG 0.511265 3.2:+70054480 MS.gene25841:CDS
TTATGATCTCCTACACTAGC+TGG 0.511540 3.2:+70056713 MS.gene25841:CDS
AGATATGGCTGAATCACAAC+CGG 0.512743 3.2:-70058193 None:intergenic
AAAGGCATCTGCTGAGACTT+GGG 0.515013 3.2:+70054931 MS.gene25841:CDS
GTTCCCTTCCTGGAATTGCC+AGG 0.515895 3.2:-70055590 None:intergenic
AGTTAGCAAGAGAAGCTGTT+CGG 0.516214 3.2:+70057426 MS.gene25841:CDS
GTAGTCAAACCAAATCCAAA+TGG 0.519838 3.2:-70058388 None:intergenic
ACCAATGAAGTACTTGGTCA+TGG 0.520535 3.2:-70054522 None:intergenic
TCTCCTACACTAGCTGGAAT+GGG 0.523580 3.2:+70056719 MS.gene25841:CDS
ACCATCTCCCACAAAATGCT+TGG 0.524715 3.2:-70056581 None:intergenic
TTTGAGGCTTTCTTGGGAAG+GGG 0.526484 3.2:-70057500 None:intergenic
ATGACTTTGGAGGAAAAGAT+AGG 0.531688 3.2:+70054458 MS.gene25841:CDS
TAGTTTACCAATGAAGTACT+TGG 0.536321 3.2:-70054528 None:intergenic
ATAATTGAGTCATAGTATGC+TGG 0.538845 3.2:-70056673 None:intergenic
GAAATCTTCAATCCCTGTAG+TGG 0.541084 3.2:+70054328 MS.gene25841:CDS
TAGAAAGTATAAAGATCCTA+AGG 0.541881 3.2:+70054397 MS.gene25841:CDS
CAGATTGGCAGGGTATTGAC+CGG 0.554348 3.2:+70056933 MS.gene25841:CDS
CTTAAGAGTAAAATTTACCA+TGG 0.558634 3.2:+70057245 MS.gene25841:CDS
TATTCATACTCTGTTGAAGC+TGG 0.559362 3.2:+70056980 MS.gene25841:CDS
AGCACCATCACCAATGTATG+TGG 0.560509 3.2:+70058133 MS.gene25841:CDS
GCAGGGAGTGTGTTGAGTGG+GGG 0.562901 3.2:+70054890 MS.gene25841:intron
TGAGCAGGGAGTGTGTTGAG+TGG 0.563237 3.2:+70054887 MS.gene25841:intron
ACCATTCTTTAGCAGCACTA+GGG 0.563428 3.2:-70057453 None:intergenic
ATGTTGGGCTTGGAGTTACC+AGG 0.568992 3.2:+70055077 MS.gene25841:CDS
GCTAACCGTGATCTTGTCAC+TGG 0.569380 3.2:+70056754 MS.gene25841:CDS
CACAAACCAATTGGGTAGCA+AGG 0.570833 3.2:+70057302 MS.gene25841:CDS
AATCTAACAATACCTGAGCC+AGG 0.570894 3.2:+70058106 MS.gene25841:CDS
TATGAATAGTTAGCATGAGG+AGG 0.570907 3.2:-70056965 None:intergenic
TCATAGCAACGTCCCCACCT+TGG 0.571419 3.2:-70055497 None:intergenic
ATAAACTACAAAGGACTGCT+CGG 0.571658 3.2:+70056640 MS.gene25841:CDS
AATTCACTGGCAAACTGGCA+AGG 0.573063 3.2:+70058299 MS.gene25841:CDS
GGAGATGGTGGCACAACCAA+GGG 0.574513 3.2:+70056595 MS.gene25841:CDS
TACCATTCTTTAGCAGCACT+AGG 0.575010 3.2:-70057454 None:intergenic
TTTCCCATTCCAGCTAGTGT+AGG 0.575849 3.2:-70056722 None:intergenic
TTGATGCACTTGTGGCTGCA+TGG 0.576226 3.2:+70058224 MS.gene25841:CDS
CTGGCAAACTGGCAAGGACA+TGG 0.581102 3.2:+70058305 MS.gene25841:CDS
GACCAGCTTCCAATGAATGT+TGG 0.581266 3.2:+70058340 MS.gene25841:CDS
GGAATATCTCCTTGAAGACC+AGG 0.584165 3.2:-70055569 None:intergenic
CTTCCTGGCACTGAAGGCCA+AGG 0.585582 3.2:+70058247 MS.gene25841:CDS
ATAGTTAGCATGAGGAGGAG+AGG 0.585602 3.2:-70056960 None:intergenic
TTAAGAGTAAAATTTACCAT+GGG 0.589009 3.2:+70057246 MS.gene25841:CDS
ACTCCAAGCCCAACATTGTG+AGG 0.594912 3.2:-70055070 None:intergenic
TCGAATTGAGCCACATACAT+TGG 0.595136 3.2:-70058143 None:intergenic
ATCTTCAATCCCTGTAGTGG+GGG 0.596502 3.2:+70054331 MS.gene25841:CDS
TCCAGTAGCTCTAACTTCAA+GGG 0.597132 3.2:-70055339 None:intergenic
GTGGTGGATGGACAATTACT+TGG 0.597728 3.2:+70057567 MS.gene25841:CDS
TATTCCTGGCAATTCCAGGA+AGG 0.608444 3.2:+70055586 MS.gene25841:CDS
TGGGTAATCAATGTGGTGGA+TGG 0.609548 3.2:+70057555 MS.gene25841:CDS
GGATGGACAATTACTTGGCA+GGG 0.610729 3.2:+70057572 MS.gene25841:CDS
GGGAGATGGTGGCACAACCA+AGG 0.610937 3.2:+70056594 MS.gene25841:CDS
ACTATGACTGAAATTATACC+TGG 0.611152 3.2:+70055551 MS.gene25841:CDS
ATTACTTTGACCCAGGAACA+AGG 0.611384 3.2:+70056546 MS.gene25841:intron
CACAGGTCTGCAGAGATCCA+AGG 0.612507 3.2:+70055480 MS.gene25841:intron
TACTATGACTCAATTATCAA+GGG 0.614551 3.2:+70056679 MS.gene25841:CDS
GTCTGCAGAGATCCAAGGTG+GGG 0.623803 3.2:+70055485 MS.gene25841:CDS
ATTCCTGGCAATTCCAGGAA+GGG 0.629290 3.2:+70055587 MS.gene25841:CDS
GAGTATGAATAGTTAGCATG+AGG 0.632304 3.2:-70056968 None:intergenic
CTCCAAGCCCAACATTGTGA+GGG 0.633682 3.2:-70055069 None:intergenic
AATCTTCAATCCCTGTAGTG+GGG 0.637064 3.2:+70054330 MS.gene25841:CDS
TAGCAGGATTGACGATGCTG+TGG 0.639920 3.2:+70057215 MS.gene25841:CDS
AATACTGTGATAAACTACAA+AGG 0.649484 3.2:+70056631 MS.gene25841:CDS
TGAGCCACATACATTGGTGA+TGG 0.655207 3.2:-70058137 None:intergenic
GGTCTGCAGAGATCCAAGGT+GGG 0.656347 3.2:+70055484 MS.gene25841:intron
AGAGAACGTCAGTAACACCT+TGG 0.656582 3.2:-70058264 None:intergenic
GATAACCAGTGACAAGATCA+CGG 0.663157 3.2:-70056759 None:intergenic
AGGTCTGCAGAGATCCAAGG+TGG 0.666220 3.2:+70055483 MS.gene25841:intron
AATTTGGGTAATCAATGTGG+TGG 0.666365 3.2:+70057551 MS.gene25841:CDS
GTGAGACTTAGATCAGCGAG+TGG 0.666997 3.2:-70057282 None:intergenic
TAAATCATTGGAATCCCAAG+AGG 0.673274 3.2:-70054995 None:intergenic
TAGTGGTAGTGATCTTACAA+CGG 0.680346 3.2:+70057598 MS.gene25841:CDS
TTTGTCATATCAGATTGGCA+GGG 0.682521 3.2:+70056923 MS.gene25841:CDS
GACAATTTGGGTAATCAATG+TGG 0.683166 3.2:+70057548 MS.gene25841:CDS
TGTGTTTGCTCCATGTATTG+CGG 0.724417 3.2:+70055370 MS.gene25841:CDS
GTTATCTCAAGAACAAACTG+CGG 0.748132 3.2:+70056776 MS.gene25841:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTAAAGTTGAATTATATATT+AGG + chr3.2:70056239-70056258 MS.gene25841:intron 15.0%
!! TCTATATAACAAATAGTATT+CGG + chr3.2:70057751-70057770 MS.gene25841:intron 15.0%
!!! AGTTTTTATATATTACAGTT+AGG + chr3.2:70057711-70057730 MS.gene25841:intron 15.0%
!! AATATTGTTCTTTACTTGAA+AGG - chr3.2:70057187-70057206 None:intergenic 20.0%
!! AATGAAATCTACTGTTTATT+AGG + chr3.2:70055279-70055298 MS.gene25841:intron 20.0%
!! AGAAAAAGAAATAGAAAAGA+TGG + chr3.2:70056045-70056064 MS.gene25841:intron 20.0%
!! ATGAAATCTACTGTTTATTA+GGG + chr3.2:70055280-70055299 MS.gene25841:intron 20.0%
!! GAAAATATGTTTGTTTAATG+CGG + chr3.2:70055913-70055932 MS.gene25841:intron 20.0%
!! GTCAAAGTAATAAAAATGAA+GGG - chr3.2:70056537-70056556 None:intergenic 20.0%
!! GTTAAATAAATAGCACATTA+AGG + chr3.2:70056332-70056351 MS.gene25841:intron 20.0%
!! TAGATTTGTGTTTATTGAAA+AGG - chr3.2:70055228-70055247 None:intergenic 20.0%
!! TTAAGAGTAAAATTTACCAT+GGG + chr3.2:70057246-70057265 MS.gene25841:CDS 20.0%
!! TTTCATTCACCAAAATAAAA+GGG + chr3.2:70056019-70056038 MS.gene25841:intron 20.0%
!!! GTTTTTTCAAATCATTTGAA+TGG + chr3.2:70056127-70056146 MS.gene25841:intron 20.0%
!!! TTTTCATTCACCAAAATAAA+AGG + chr3.2:70056018-70056037 MS.gene25841:intron 20.0%
! AAAAGAAATAGAAAAGATGG+TGG + chr3.2:70056048-70056067 MS.gene25841:intron 25.0%
! AACTTAAGTCACAAAAAGAA+AGG + chr3.2:70056848-70056867 MS.gene25841:intron 25.0%
! AAGAAATCATAGAATCATCT+TGG - chr3.2:70057792-70057811 None:intergenic 25.0%
! AATACTGTGATAAACTACAA+AGG + chr3.2:70056631-70056650 MS.gene25841:CDS 25.0%
! AATGAACTCAGTAAAGTTAT+AGG - chr3.2:70057154-70057173 None:intergenic 25.0%
! ACCATAAAAAAGAAGCTTAT+GGG - chr3.2:70056075-70056094 None:intergenic 25.0%
! ATACTATGACTCAATTATCA+AGG + chr3.2:70056678-70056697 MS.gene25841:CDS 25.0%
! ATGAACTCAGTAAAGTTATA+GGG - chr3.2:70057153-70057172 None:intergenic 25.0%
! CTTAAGAGTAAAATTTACCA+TGG + chr3.2:70057245-70057264 MS.gene25841:CDS 25.0%
! GGTCAAAGTAATAAAAATGA+AGG - chr3.2:70056538-70056557 None:intergenic 25.0%
! TACCATATTATGCATTCAAA+TGG + chr3.2:70056157-70056176 MS.gene25841:intron 25.0%
! TACTATGACTCAATTATCAA+GGG + chr3.2:70056679-70056698 MS.gene25841:CDS 25.0%
! TCTTTGATTCTTCTATTCAA+TGG - chr3.2:70054425-70054444 None:intergenic 25.0%
! TGATGATAGATTTGTGTAAA+GGG + chr3.2:70054627-70054646 MS.gene25841:intron 25.0%
! TTCAAATCATTTGAATGGTT+GGG + chr3.2:70056132-70056151 MS.gene25841:intron 25.0%
! TTTCAAATCATTTGAATGGT+TGG + chr3.2:70056131-70056150 MS.gene25841:intron 25.0%
!! AATTTTTCTTCCATCTTGTA+GGG + chr3.2:70056899-70056918 MS.gene25841:intron 25.0%
!! AGATAAAGTTTATGTTTTCC+TGG + chr3.2:70055993-70056012 MS.gene25841:intron 25.0%
!! CATATTTGATAACTTGTAAC+TGG + chr3.2:70055178-70055197 MS.gene25841:intron 25.0%
!! GCATCAATTTTTGATAGATA+TGG - chr3.2:70058211-70058230 None:intergenic 25.0%
!! GTTTTACAATTTCCCATAAA+AGG - chr3.2:70057897-70057916 None:intergenic 25.0%
!! TAATTTTTCTTCCATCTTGT+AGG + chr3.2:70056898-70056917 MS.gene25841:intron 25.0%
!! TAGAAAGTATAAAGATCCTA+AGG + chr3.2:70054397-70054416 MS.gene25841:CDS 25.0%
!! TCTTCTTTTCAATCATTTCA+TGG - chr3.2:70055134-70055153 None:intergenic 25.0%
!!! GTCATAGTTTTAACAATCTT+AGG - chr3.2:70055539-70055558 None:intergenic 25.0%
!!! TAAGATTATTTTTTCCTGAC+AGG + chr3.2:70057923-70057942 MS.gene25841:intron 25.0%
!!! TCATAAGTTTTATATCAGTG+TGG + chr3.2:70055868-70055887 MS.gene25841:intron 25.0%
!!! TTTATTGTTTTGCTGTAATG+AGG + chr3.2:70054834-70054853 MS.gene25841:intron 25.0%
!!! TTTTCTTCTCCCTTTTATTT+TGG - chr3.2:70056031-70056050 None:intergenic 25.0%
AAACCTTATGCTGAAACATT+TGG + chr3.2:70058073-70058092 MS.gene25841:CDS 30.0%
ACAATATTATCCCAATTAGC+AGG + chr3.2:70057199-70057218 MS.gene25841:CDS 30.0%
ACTATGACTGAAATTATACC+TGG + chr3.2:70055551-70055570 MS.gene25841:CDS 30.0%
AGCCATTTGAATGCATAATA+TGG - chr3.2:70056162-70056181 None:intergenic 30.0%
ATAATTGAGTCATAGTATGC+TGG - chr3.2:70056676-70056695 None:intergenic 30.0%
ATATTATGCATTCAAATGGC+TGG + chr3.2:70056161-70056180 MS.gene25841:intron 30.0%
ATCAAAAATTGATGCACTTG+TGG + chr3.2:70058216-70058235 MS.gene25841:CDS 30.0%
ATCAATACAATGCTATTACC+AGG - chr3.2:70055802-70055821 None:intergenic 30.0%
CCAGTGCTAATAAAAAAGAT+TGG + chr3.2:70055305-70055324 MS.gene25841:CDS 30.0%
GACCATAAAAAAGAAGCTTA+TGG - chr3.2:70056076-70056095 None:intergenic 30.0%
GGTCGTATTTACATTATAGA+TGG - chr3.2:70056188-70056207 None:intergenic 30.0%
GTGATGATAGATTTGTGTAA+AGG + chr3.2:70054626-70054645 MS.gene25841:intron 30.0%
TAAAACTTATGACCAGAAAC+AGG - chr3.2:70055860-70055879 None:intergenic 30.0%
TATGATCCTCTATTTCCATT+TGG + chr3.2:70058373-70058392 MS.gene25841:CDS 30.0%
TCTTATGCCATAGTTATTGT+GGG + chr3.2:70058046-70058065 MS.gene25841:CDS 30.0%
TGTTCTTTACTTGAAAGGTT+AGG - chr3.2:70057182-70057201 None:intergenic 30.0%
TTACCAGGAAACTTTAGTTA+TGG - chr3.2:70055787-70055806 None:intergenic 30.0%
TTCACATTGTTTGCAGATTA+TGG + chr3.2:70057125-70057144 MS.gene25841:intron 30.0%
TTCTTATGCCATAGTTATTG+TGG + chr3.2:70058045-70058064 MS.gene25841:CDS 30.0%
TTGAAAAAACCCATATGTGT+GGG - chr3.2:70056117-70056136 None:intergenic 30.0%
TTGGGATTCCAATGATTTAT+GGG + chr3.2:70054999-70055018 MS.gene25841:CDS 30.0%
TTTGAAAAAACCCATATGTG+TGG - chr3.2:70056118-70056137 None:intergenic 30.0%
TTTGATGAGTAGAATGACTT+TGG + chr3.2:70054445-70054464 MS.gene25841:CDS 30.0%
! AATTATTATCAGTGTCGTTG+AGG + chr3.2:70054759-70054778 MS.gene25841:intron 30.0%
! ACCAAGACTTTTTGTGTAAT+TGG - chr3.2:70056268-70056287 None:intergenic 30.0%
! CATTTTTATTACTTTGACCC+AGG + chr3.2:70056539-70056558 MS.gene25841:intron 30.0%
! CCAAGACTTTTTGTGTAATT+GGG - chr3.2:70056267-70056286 None:intergenic 30.0%
! TAGTTTACCAATGAAGTACT+TGG - chr3.2:70054531-70054550 None:intergenic 30.0%
! TCATAAGTCTTGTAGTTGTA+TGG + chr3.2:70055675-70055694 MS.gene25841:intron 30.0%
! TTTCCATAGCATCCTTTTAT+GGG + chr3.2:70057882-70057901 MS.gene25841:intron 30.0%
! TTTTTCTCCCACAATAACTA+TGG - chr3.2:70058056-70058075 None:intergenic 30.0%
!! TTGTTTTATAGCATCAAGGA+TGG - chr3.2:70057954-70057973 None:intergenic 30.0%
!!! ACCCATAAGCTTCTTTTTTA+TGG + chr3.2:70056071-70056090 MS.gene25841:intron 30.0%
!!! CAAGTTTGCTGATATTTTGA+TGG + chr3.2:70055445-70055464 MS.gene25841:intron 30.0%
!!! CCAATCTTTTTTATTAGCAC+TGG - chr3.2:70055308-70055327 None:intergenic 30.0%
!!! CTGTTTGTTTTATAGCATCA+AGG - chr3.2:70057958-70057977 None:intergenic 30.0%
AAATCTTCAATCCCTGTAGT+GGG + chr3.2:70054329-70054348 MS.gene25841:CDS 35.0%
AATTTGGGTAATCAATGTGG+TGG + chr3.2:70057551-70057570 MS.gene25841:CDS 35.0%
ACTTACTTTCCAGCAACAAA+AGG - chr3.2:70055617-70055636 None:intergenic 35.0%
AGGCAAGTTTATGTATATGC+AGG + chr3.2:70055097-70055116 MS.gene25841:intron 35.0%
ATAAACTACAAAGGACTGCT+CGG + chr3.2:70056640-70056659 MS.gene25841:CDS 35.0%
ATAATTGATGCTCCGATTGA+TGG - chr3.2:70055966-70055985 None:intergenic 35.0%
ATACATGGAGCAAACACATA+TGG - chr3.2:70055368-70055387 None:intergenic 35.0%
ATTGTTCTCATTGATACCCT+TGG - chr3.2:70056614-70056633 None:intergenic 35.0%
CATCCATAACTAAAGTTTCC+TGG + chr3.2:70055781-70055800 MS.gene25841:intron 35.0%
CATCTTACCAGTTGTGTTTA+CGG - chr3.2:70057824-70057843 None:intergenic 35.0%
CCAAATCCAAATGGAAATAG+AGG - chr3.2:70058382-70058401 None:intergenic 35.0%
CCCAATTACACAAAAAGTCT+TGG + chr3.2:70056264-70056283 MS.gene25841:intron 35.0%
CCTCTATTTCCATTTGGATT+TGG + chr3.2:70058379-70058398 MS.gene25841:CDS 35.0%
CTAAGTCTCACAAACCAATT+GGG + chr3.2:70057294-70057313 MS.gene25841:CDS 35.0%
CTTGGGATTCCAATGATTTA+TGG + chr3.2:70054998-70055017 MS.gene25841:CDS 35.0%
GACAATTTGGGTAATCAATG+TGG + chr3.2:70057548-70057567 MS.gene25841:CDS 35.0%
GACTTGATAAAACTAGCATC+TGG - chr3.2:70058016-70058035 None:intergenic 35.0%
GAGTATGAATAGTTAGCATG+AGG - chr3.2:70056971-70056990 None:intergenic 35.0%
GCATCTATCCCATAAATCAT+TGG - chr3.2:70055010-70055029 None:intergenic 35.0%
GTAGTCAAACCAAATCCAAA+TGG - chr3.2:70058391-70058410 None:intergenic 35.0%
GTTATCTCAAGAACAAACTG+CGG + chr3.2:70056776-70056795 MS.gene25841:CDS 35.0%
TAAATCATTGGAATCCCAAG+AGG - chr3.2:70054998-70055017 None:intergenic 35.0%
TAATTGATGCTCCGATTGAT+GGG - chr3.2:70055965-70055984 None:intergenic 35.0%
TATGAATAGTTAGCATGAGG+AGG - chr3.2:70056968-70056987 None:intergenic 35.0%
TATGACAAAACCCTACAAGA+TGG - chr3.2:70056912-70056931 None:intergenic 35.0%
TATGGTGACTTTGAATTCAC+TGG + chr3.2:70058286-70058305 MS.gene25841:CDS 35.0%
TATTCATACTCTGTTGAAGC+TGG + chr3.2:70056980-70056999 MS.gene25841:CDS 35.0%
TCACCAAATGTTTCAGCATA+AGG - chr3.2:70058079-70058098 None:intergenic 35.0%
TCGCATATCATGTCTTAAAC+AGG + chr3.2:70057394-70057413 MS.gene25841:intron 35.0%
TCTAACAGACATTCTAAGTG+CGG - chr3.2:70057684-70057703 None:intergenic 35.0%
TCTAAGTCTCACAAACCAAT+TGG + chr3.2:70057293-70057312 MS.gene25841:CDS 35.0%
TGCATATACATAAACTTGCC+TGG - chr3.2:70055098-70055117 None:intergenic 35.0%
TGTTTATCGCCAACATTCAT+TGG - chr3.2:70058352-70058371 None:intergenic 35.0%
TTTCCCATAAAAGGATGCTA+TGG - chr3.2:70057888-70057907 None:intergenic 35.0%
TTTGTCATATCAGATTGGCA+GGG + chr3.2:70056923-70056942 MS.gene25841:CDS 35.0%
! AAGTCTTGTAGTTGTATGGT+TGG + chr3.2:70055679-70055698 MS.gene25841:intron 35.0%
! ACTATTTTCCCTCACAATGT+TGG + chr3.2:70055061-70055080 MS.gene25841:CDS 35.0%
! ATGACTTTGGAGGAAAAGAT+AGG + chr3.2:70054458-70054477 MS.gene25841:CDS 35.0%
! CTATTTTCCCTCACAATGTT+GGG + chr3.2:70055062-70055081 MS.gene25841:CDS 35.0%
! CTTTCCATAGCATCCTTTTA+TGG + chr3.2:70057881-70057900 MS.gene25841:intron 35.0%
! GAAATTATACCTGGTCTTCA+AGG + chr3.2:70055560-70055579 MS.gene25841:CDS 35.0%
! GAGTAGATAAAGCTGCATTT+TGG - chr3.2:70054976-70054995 None:intergenic 35.0%
! GCTGTAATGAGGTGATTTTA+TGG + chr3.2:70054845-70054864 MS.gene25841:intron 35.0%
! TAGTGGTAGTGATCTTACAA+CGG + chr3.2:70057598-70057617 MS.gene25841:CDS 35.0%
! TTTTGGTGAATGAAAAAGCC+AGG - chr3.2:70056014-70056033 None:intergenic 35.0%
! TTTTGTCATATCAGATTGGC+AGG + chr3.2:70056922-70056941 MS.gene25841:CDS 35.0%
!! AGGGTTTTGTCATATCAGAT+TGG + chr3.2:70056918-70056937 MS.gene25841:intron 35.0%
!!! AAGACTTTTGAGGCTTTCTT+GGG - chr3.2:70057509-70057528 None:intergenic 35.0%
!!! GGTTGGTGATTTTCTATGAA+GGG + chr3.2:70055696-70055715 MS.gene25841:intron 35.0%
!!! TGGTTGGTGATTTTCTATGA+AGG + chr3.2:70055695-70055714 MS.gene25841:intron 35.0%
!!! TGTTTTGTTTTGCCTGTTTC+TGG + chr3.2:70055845-70055864 MS.gene25841:intron 35.0%
AATCTAACAATACCTGAGCC+AGG + chr3.2:70058106-70058125 MS.gene25841:CDS 40.0%
AATCTTCAATCCCTGTAGTG+GGG + chr3.2:70054330-70054349 MS.gene25841:CDS 40.0%
AATGTACCTTGCTACCCAAT+TGG - chr3.2:70057311-70057330 None:intergenic 40.0%
AATTGATGCTCCGATTGATG+GGG - chr3.2:70055964-70055983 None:intergenic 40.0%
ACCATTCTTTAGCAGCACTA+GGG - chr3.2:70057456-70057475 None:intergenic 40.0%
AGATATGGCTGAATCACAAC+CGG - chr3.2:70058196-70058215 None:intergenic 40.0%
AGGAAGTCATGCTGACAATT+TGG + chr3.2:70057535-70057554 MS.gene25841:CDS 40.0%
AGTTAGCAAGAGAAGCTGTT+CGG + chr3.2:70057426-70057445 MS.gene25841:CDS 40.0%
ATTACTTTGACCCAGGAACA+AGG + chr3.2:70056546-70056565 MS.gene25841:intron 40.0%
CAAGAAAGCCTCAAAAGTCT+TGG + chr3.2:70057508-70057527 MS.gene25841:CDS 40.0%
CACTTCAGATCAAATGTGTG+TGG + chr3.2:70054675-70054694 MS.gene25841:intron 40.0%
CATCGTCAATCCTGCTAATT+GGG - chr3.2:70057212-70057231 None:intergenic 40.0%
CTTCTATTCAATGGCACCTT+AGG - chr3.2:70054416-70054435 None:intergenic 40.0%
CTTTGAATTCACTGGCAAAC+TGG + chr3.2:70058294-70058313 MS.gene25841:CDS 40.0%
CTTTGTGTGTATTGTGTGCA+TGG - chr3.2:70056209-70056228 None:intergenic 40.0%
GAAATCTTCAATCCCTGTAG+TGG + chr3.2:70054328-70054347 MS.gene25841:CDS 40.0%
GATAACCAGTGACAAGATCA+CGG - chr3.2:70056762-70056781 None:intergenic 40.0%
GATGAGTAGAATGACTTTGG+AGG + chr3.2:70054448-70054467 MS.gene25841:CDS 40.0%
GATGGACCATTCATTAACAC+AGG + chr3.2:70055463-70055482 MS.gene25841:intron 40.0%
GCATTCAGCACATGTTCAAA+TGG - chr3.2:70057346-70057365 None:intergenic 40.0%
GGAAGTCATGCTGACAATTT+GGG + chr3.2:70057536-70057555 MS.gene25841:CDS 40.0%
GTCAAATGACTCAGCTTGAA+AGG + chr3.2:70054480-70054499 MS.gene25841:CDS 40.0%
TACCATTCTTTAGCAGCACT+AGG - chr3.2:70057457-70057476 None:intergenic 40.0%
TATGATGGTCCCACACATAT+GGG + chr3.2:70056105-70056124 MS.gene25841:intron 40.0%
TATGGGATAGATGCTGTTCA+TGG + chr3.2:70055016-70055035 MS.gene25841:CDS 40.0%
TATGTGTGGGACCATCATAA+CGG - chr3.2:70056104-70056123 None:intergenic 40.0%
TCGAATTGAGCCACATACAT+TGG - chr3.2:70058146-70058165 None:intergenic 40.0%
TGCAGACCTGTGTTAATGAA+TGG - chr3.2:70055472-70055491 None:intergenic 40.0%
TGCTTCTTTACCGCAATACA+TGG - chr3.2:70055383-70055402 None:intergenic 40.0%
TGTCAGTGTCTAGTAAGTGT+CGG - chr3.2:70054713-70054732 None:intergenic 40.0%
TGTGTTTGCTCCATGTATTG+CGG + chr3.2:70055370-70055389 MS.gene25841:CDS 40.0%
TTATGATCTCCTACACTAGC+TGG + chr3.2:70056713-70056732 MS.gene25841:CDS 40.0%
TTATGATGGTCCCACACATA+TGG + chr3.2:70056104-70056123 MS.gene25841:intron 40.0%
TTCAGATCAAATGTGTGTGG+TGG + chr3.2:70054678-70054697 MS.gene25841:intron 40.0%
TTGTAGACAACTTCAGTTGC+AGG - chr3.2:70057986-70058005 None:intergenic 40.0%
! ACCAATGAAGTACTTGGTCA+TGG - chr3.2:70054525-70054544 None:intergenic 40.0%
! AGTGGTAGTGATCTTACAAC+GGG + chr3.2:70057599-70057618 MS.gene25841:CDS 40.0%
! CAGCTTTATCTACTCCTCTT+GGG + chr3.2:70054981-70055000 MS.gene25841:CDS 40.0%
! TGACTTGTCATTGATGAGCA+GGG + chr3.2:70054873-70054892 MS.gene25841:intron 40.0%
! TGGATTTTCAAAAAGGCCCA+TGG - chr3.2:70057265-70057284 None:intergenic 40.0%
! TGTCAGTGCTGGAATTGATA+TGG + chr3.2:70057003-70057022 MS.gene25841:CDS 40.0%
!! CAGCGAGTGGATTTTCAAAA+AGG - chr3.2:70057272-70057291 None:intergenic 40.0%
!! TCCAGTAGCTCTAACTTCAA+GGG - chr3.2:70055342-70055361 None:intergenic 40.0%
!! TTCCAGTAGCTCTAACTTCA+AGG - chr3.2:70055343-70055362 None:intergenic 40.0%
!!! CAAGACTTTTGAGGCTTTCT+TGG - chr3.2:70057510-70057529 None:intergenic 40.0%
!!! TTTTGAGGCTTTCTTGGGAA+GGG - chr3.2:70057504-70057523 None:intergenic 40.0%
AACAAAAGGAGTTCCCTTCC+TGG - chr3.2:70055603-70055622 None:intergenic 45.0%
AAGTACTTGGTCATGGCTTC+AGG - chr3.2:70054518-70054537 None:intergenic 45.0%
AATTCACTGGCAAACTGGCA+AGG + chr3.2:70058299-70058318 MS.gene25841:CDS 45.0%
ACATGAGTTCCCCCATCAAT+CGG + chr3.2:70055951-70055970 MS.gene25841:intron 45.0%
ACCATCTCCCACAAAATGCT+TGG - chr3.2:70056584-70056603 None:intergenic 45.0%
AGAGAACGTCAGTAACACCT+TGG - chr3.2:70058267-70058286 None:intergenic 45.0%
AGCACCATCACCAATGTATG+TGG + chr3.2:70058133-70058152 MS.gene25841:CDS 45.0%
ATAGTTAGCATGAGGAGGAG+AGG - chr3.2:70056963-70056982 None:intergenic 45.0%
ATCTCCTACACTAGCTGGAA+TGG + chr3.2:70056718-70056737 MS.gene25841:CDS 45.0%
ATCTTCAATCCCTGTAGTGG+GGG + chr3.2:70054331-70054350 MS.gene25841:CDS 45.0%
ATGGTCCTATGCCGTTATGA+TGG + chr3.2:70056090-70056109 MS.gene25841:intron 45.0%
ATTACTTGGCAGGGACTTAG+TGG + chr3.2:70057581-70057600 MS.gene25841:CDS 45.0%
ATTCCTGGCAATTCCAGGAA+GGG + chr3.2:70055587-70055606 MS.gene25841:CDS 45.0%
ATTGATGCTCCGATTGATGG+GGG - chr3.2:70055963-70055982 None:intergenic 45.0%
CAAGAACAAACTGCGGTTCA+GGG + chr3.2:70056783-70056802 MS.gene25841:CDS 45.0%
CACAAACCAATTGGGTAGCA+AGG + chr3.2:70057302-70057321 MS.gene25841:CDS 45.0%
CACTTGTTCAGCTTTCATCG+GGG + chr3.2:70055891-70055910 MS.gene25841:intron 45.0%
GACCAGCTTCCAATGAATGT+TGG + chr3.2:70058340-70058359 MS.gene25841:CDS 45.0%
GAGATATTCCTGGCAATTCC+AGG + chr3.2:70055582-70055601 MS.gene25841:CDS 45.0%
GCACTTGTTCAGCTTTCATC+GGG + chr3.2:70055890-70055909 MS.gene25841:intron 45.0%
GCATCGTCAATCCTGCTAAT+TGG - chr3.2:70057213-70057232 None:intergenic 45.0%
GCCATGACCAAGTACTTCAT+TGG + chr3.2:70054521-70054540 MS.gene25841:CDS 45.0%
GGAATATCTCCTTGAAGACC+AGG - chr3.2:70055572-70055591 None:intergenic 45.0%
GGATGGACAATTACTTGGCA+GGG + chr3.2:70057572-70057591 MS.gene25841:CDS 45.0%
GGCACTTGTTCAGCTTTCAT+CGG + chr3.2:70055889-70055908 MS.gene25841:intron 45.0%
GGTCTTCAAGGAGATATTCC+TGG + chr3.2:70055572-70055591 MS.gene25841:CDS 45.0%
GTGTAGTTGTTCTCGTCACT+GGG + chr3.2:70058167-70058186 MS.gene25841:CDS 45.0%
TACCAGTTGTGTTTACGGAC+AGG - chr3.2:70057819-70057838 None:intergenic 45.0%
TATTCCTGGCAATTCCAGGA+AGG + chr3.2:70055586-70055605 MS.gene25841:CDS 45.0%
TCAAGAACAAACTGCGGTTC+AGG + chr3.2:70056782-70056801 MS.gene25841:CDS 45.0%
TCTCCTACACTAGCTGGAAT+GGG + chr3.2:70056719-70056738 MS.gene25841:CDS 45.0%
TGAGCCACATACATTGGTGA+TGG - chr3.2:70058140-70058159 None:intergenic 45.0%
TGCTGAGACTTGGGTGAAAA+TGG + chr3.2:70054940-70054959 MS.gene25841:CDS 45.0%
TGGATGGACAATTACTTGGC+AGG + chr3.2:70057571-70057590 MS.gene25841:CDS 45.0%
TGTGTAGTTGTTCTCGTCAC+TGG + chr3.2:70058166-70058185 MS.gene25841:CDS 45.0%
TTCCTGTCCGTAAACACAAC+TGG + chr3.2:70057814-70057833 MS.gene25841:intron 45.0%
TTTCCCATTCCAGCTAGTGT+AGG - chr3.2:70056725-70056744 None:intergenic 45.0%
! AAGCATTTTGTGGGAGATGG+TGG + chr3.2:70056583-70056602 MS.gene25841:CDS 45.0%
! AAGGGAACTCCTTTTGTTGC+TGG + chr3.2:70055605-70055624 MS.gene25841:CDS 45.0%
! AGCTTGTGCCAAGCATTTTG+TGG + chr3.2:70056573-70056592 MS.gene25841:CDS 45.0%
! GCAGCTTTATCTACTCCTCT+TGG + chr3.2:70054980-70054999 MS.gene25841:CDS 45.0%
! GCTTGTGCCAAGCATTTTGT+GGG + chr3.2:70056574-70056593 MS.gene25841:CDS 45.0%
! GGTTCTGCTTCTGTGCTTTT+TGG + chr3.2:70054352-70054371 MS.gene25841:CDS 45.0%
! GTGACTTGTCATTGATGAGC+AGG + chr3.2:70054872-70054891 MS.gene25841:intron 45.0%
! TCAAATGTGTGTGGTGGTGT+CGG + chr3.2:70054684-70054703 MS.gene25841:intron 45.0%
! TCCCTAGTGCTGCTAAAGAA+TGG + chr3.2:70057452-70057471 MS.gene25841:CDS 45.0%
! TCCTGCAACCAAGACTTTTG+AGG - chr3.2:70057519-70057538 None:intergenic 45.0%
! TGGGTAATCAATGTGGTGGA+TGG + chr3.2:70057555-70057574 MS.gene25841:CDS 45.0%
! TTTGAGGCTTTCTTGGGAAG+GGG - chr3.2:70057503-70057522 None:intergenic 45.0%
!! AAAAGGCATCTGCTGAGACT+TGG + chr3.2:70054930-70054949 MS.gene25841:CDS 45.0%
!! AAAGGCATCTGCTGAGACTT+GGG + chr3.2:70054931-70054950 MS.gene25841:CDS 45.0%
!! CATACATTGGTGATGGTGCT+TGG - chr3.2:70058133-70058152 None:intergenic 45.0%
!! GGTGTTACTGACGTTCTCTA+TGG + chr3.2:70058268-70058287 MS.gene25841:CDS 45.0%
!! GTGGTGGATGGACAATTACT+TGG + chr3.2:70057567-70057586 MS.gene25841:CDS 45.0%
!!! CTTTTGAGGCTTTCTTGGGA+AGG - chr3.2:70057505-70057524 None:intergenic 45.0%
!! AAATAAAAATAAAAATTCTA+AGG - chr3.2:70054810-70054829 None:intergenic 5.0%
!!! ATTTAATTTAATATGAAAAT+TGG - chr3.2:70056465-70056484 None:intergenic 5.0%
ACAAGCTGCAACCTTGTTCC+TGG - chr3.2:70056560-70056579 None:intergenic 50.0%
ACTCCAAGCCCAACATTGTG+AGG - chr3.2:70055073-70055092 None:intergenic 50.0%
ATGTTGGGCTTGGAGTTACC+AGG + chr3.2:70055077-70055096 MS.gene25841:CDS 50.0%
CAAGCTGCAACCTTGTTCCT+GGG - chr3.2:70056559-70056578 None:intergenic 50.0%
CAAGGATGGTTGTACCTGTC+AGG - chr3.2:70057940-70057959 None:intergenic 50.0%
CATGAGGAGGAGAGGTAATC+CGG - chr3.2:70056955-70056974 None:intergenic 50.0%
CGCCAACATTCATTGGAAGC+TGG - chr3.2:70058345-70058364 None:intergenic 50.0%
CGTTGAGGTAGTGTCATGTC+TGG + chr3.2:70054774-70054793 MS.gene25841:intron 50.0%
CTCCAAGCCCAACATTGTGA+GGG - chr3.2:70055072-70055091 None:intergenic 50.0%
GCCCTTGAAGTTAGAGCTAC+TGG + chr3.2:70055338-70055357 MS.gene25841:CDS 50.0%
GCCTCAAAAGTCTTGGTTGC+AGG + chr3.2:70057515-70057534 MS.gene25841:CDS 50.0%
GCTAACCGTGATCTTGTCAC+TGG + chr3.2:70056754-70056773 MS.gene25841:CDS 50.0%
GGGAACTCATGTCTGCAGTA+TGG - chr3.2:70055943-70055962 None:intergenic 50.0%
GTGAGACTTAGATCAGCGAG+TGG - chr3.2:70057285-70057304 None:intergenic 50.0%
TAGCAGGATTGACGATGCTG+TGG + chr3.2:70057215-70057234 MS.gene25841:CDS 50.0%
TGGGACCATCATAACGGCAT+AGG - chr3.2:70056098-70056117 None:intergenic 50.0%
TTCCCTCACAATGTTGGGCT+TGG + chr3.2:70055067-70055086 MS.gene25841:CDS 50.0%
TTGATGCACTTGTGGCTGCA+TGG + chr3.2:70058224-70058243 MS.gene25841:CDS 50.0%
! GCCAAGCATTTTGTGGGAGA+TGG + chr3.2:70056580-70056599 MS.gene25841:CDS 50.0%
! TCAGCAGATGCCTTTTCAGC+TGG - chr3.2:70054926-70054945 None:intergenic 50.0%
!! AGGGAGTGTTCCAGCTGAAA+AGG + chr3.2:70054913-70054932 MS.gene25841:CDS 50.0%
!! CAGATTGGCAGGGTATTGAC+CGG + chr3.2:70056933-70056952 MS.gene25841:CDS 50.0%
AGAAGCAGAACCCCCACTAC+AGG - chr3.2:70054344-70054363 None:intergenic 55.0%
AGGTCTGCAGAGATCCAAGG+TGG + chr3.2:70055483-70055502 MS.gene25841:intron 55.0%
CACAGGTCTGCAGAGATCCA+AGG + chr3.2:70055480-70055499 MS.gene25841:intron 55.0%
GAAGCAGAACCCCCACTACA+GGG - chr3.2:70054343-70054362 None:intergenic 55.0%
GGTCTGCAGAGATCCAAGGT+GGG + chr3.2:70055484-70055503 MS.gene25841:intron 55.0%
GTCTGCAGAGATCCAAGGTG+GGG + chr3.2:70055485-70055504 MS.gene25841:CDS 55.0%
GTTCCCTTCCTGGAATTGCC+AGG - chr3.2:70055593-70055612 None:intergenic 55.0%
TCATAGCAACGTCCCCACCT+TGG - chr3.2:70055500-70055519 None:intergenic 55.0%
TTCTTGGGAAGGGGAAGCAG+TGG - chr3.2:70057494-70057513 None:intergenic 55.0%
! AGCAGGGAGTGTGTTGAGTG+GGG + chr3.2:70054889-70054908 MS.gene25841:intron 55.0%
! GAGCAGGGAGTGTGTTGAGT+GGG + chr3.2:70054888-70054907 MS.gene25841:intron 55.0%
! GGAGATGGTGGCACAACCAA+GGG + chr3.2:70056595-70056614 MS.gene25841:CDS 55.0%
! GTTGAAGCTGGTGTCAGTGC+TGG + chr3.2:70056992-70057011 MS.gene25841:CDS 55.0%
! TGAGCAGGGAGTGTGTTGAG+TGG + chr3.2:70054887-70054906 MS.gene25841:intron 55.0%
!! TTGGTGATGGTGCTTGGACC+TGG - chr3.2:70058127-70058146 None:intergenic 55.0%
ATGGTGCTTGGACCTGGCTC+AGG - chr3.2:70058121-70058140 None:intergenic 60.0%
CTTGTGGCTGCATGGCTTCC+TGG + chr3.2:70058232-70058251 MS.gene25841:CDS 60.0%
GGAGTGTGTTGAGTGGGGGA+GGG + chr3.2:70054894-70054913 MS.gene25841:CDS 60.0%
TGTTCTCGTCACTGGGCGTC+CGG + chr3.2:70058174-70058193 MS.gene25841:CDS 60.0%
! ACACCTTGGCCTTCAGTGCC+AGG - chr3.2:70058253-70058272 None:intergenic 60.0%
! CTTCCTGGCACTGAAGGCCA+AGG + chr3.2:70058247-70058266 MS.gene25841:CDS 60.0%
! GCAGGGAGTGTGTTGAGTGG+GGG + chr3.2:70054890-70054909 MS.gene25841:intron 60.0%
! GCATGGCTTCCTGGCACTGA+AGG + chr3.2:70058241-70058260 MS.gene25841:CDS 60.0%
! GGGAGATGGTGGCACAACCA+AGG + chr3.2:70056594-70056613 MS.gene25841:CDS 60.0%
! GGGAGTGTGTTGAGTGGGGG+AGG + chr3.2:70054893-70054912 MS.gene25841:intron 65.0%


Chromosome Type Strat End Strand Name
chr3.2 gene 70054323 70058429 70054323 ID=MS.gene25841
chr3.2 mRNA 70054323 70058429 70054323 ID=MS.gene25841.t1;Parent=MS.gene25841
chr3.2 exon 70054323 70054542 70054323 ID=MS.gene25841.t1.exon1;Parent=MS.gene25841.t1
chr3.2 CDS 70054323 70054542 70054323 ID=cds.MS.gene25841.t1;Parent=MS.gene25841.t1
chr3.2 exon 70054894 70055098 70054894 ID=MS.gene25841.t1.exon2;Parent=MS.gene25841.t1
chr3.2 CDS 70054894 70055098 70054894 ID=cds.MS.gene25841.t1;Parent=MS.gene25841.t1
chr3.2 exon 70055301 70055391 70055301 ID=MS.gene25841.t1.exon3;Parent=MS.gene25841.t1
chr3.2 CDS 70055301 70055391 70055301 ID=cds.MS.gene25841.t1;Parent=MS.gene25841.t1
chr3.2 exon 70055485 70055630 70055485 ID=MS.gene25841.t1.exon4;Parent=MS.gene25841.t1
chr3.2 CDS 70055485 70055630 70055485 ID=cds.MS.gene25841.t1;Parent=MS.gene25841.t1
chr3.2 exon 70056561 70056804 70056561 ID=MS.gene25841.t1.exon5;Parent=MS.gene25841.t1
chr3.2 CDS 70056561 70056804 70056561 ID=cds.MS.gene25841.t1;Parent=MS.gene25841.t1
chr3.2 exon 70056920 70057024 70056920 ID=MS.gene25841.t1.exon6;Parent=MS.gene25841.t1
chr3.2 CDS 70056920 70057024 70056920 ID=cds.MS.gene25841.t1;Parent=MS.gene25841.t1
chr3.2 exon 70057141 70057323 70057141 ID=MS.gene25841.t1.exon7;Parent=MS.gene25841.t1
chr3.2 CDS 70057141 70057323 70057141 ID=cds.MS.gene25841.t1;Parent=MS.gene25841.t1
chr3.2 exon 70057416 70057620 70057416 ID=MS.gene25841.t1.exon8;Parent=MS.gene25841.t1
chr3.2 CDS 70057416 70057620 70057416 ID=cds.MS.gene25841.t1;Parent=MS.gene25841.t1
chr3.2 exon 70057945 70058429 70057945 ID=MS.gene25841.t1.exon9;Parent=MS.gene25841.t1
chr3.2 CDS 70057945 70058429 70057945 ID=cds.MS.gene25841.t1;Parent=MS.gene25841.t1
Gene Sequence

>MS.gene25841

ATGGGGAAATCTTCAATCCCTGTAGTGGGGGTTCTGCTTCTGTGCTTTTTGGTTTCATTTTCAGAAGCTGAATATAGAAAGTATAAAGATCCTAAGGTGCCATTGAATAGAAGAATCAAAGATTTGATGAGTAGAATGACTTTGGAGGAAAAGATAGGTCAAATGACTCAGCTTGAAAGGAGTGTTGCTACTCCTGAAGCCATGACCAAGTACTTCATTGGTAAACTACTCATCACTTTGCTACTCAAATCTAGTAGTTTTTTATATTGTTTGATGTTGTCATGTTTTTCTGAATCTGAGTGTGTGATGATAGATTTGTGTAAAGGGTACTATGTAGCAGTAGTAGTACTGACACTTCAGATCAAATGTGTGTGGTGGTGTCGGTGTCCGACACTTACTAGACACTGACACTACATTCAGTTATTCTATTTTCTCAAATTATTATCAGTGTCGTTGAGGTAGTGTCATGTCTGGTGTCAGCATTCCTTAGAATTTTTATTTTTATTTTTATTTTATTGTTTTGCTGTAATGAGGTGATTTTATGGATATGTGACTTGTCATTGATGAGCAGGGAGTGTGTTGAGTGGGGGAGGGAGTGTTCCAGCTGAAAAGGCATCTGCTGAGACTTGGGTGAAAATGGTGAATCAGATCCAAAATGCAGCTTTATCTACTCCTCTTGGGATTCCAATGATTTATGGGATAGATGCTGTTCATGGTCACAATAATGTCTACAATGCTACTATTTTCCCTCACAATGTTGGGCTTGGAGTTACCAGGCAAGTTTATGTATATGCAGGAATTTTAATAGCCATGAAATGATTGAAAAGAAGAACGAATTAGTAGTGACATTAAATTCATATTTGATAACTTGTAACTGGAAGCTATATACTTGAAGAAGTGAACCTTTTCAATAAACACAAATCTAGCAATTTAGTGCATTTCTTTGCTTTTATTGTAATGAAATCTACTGTTTATTAGGGATCCAGTGCTAATAAAAAAGATTGGAGAAGCAACTGCCCTTGAAGTTAGAGCTACTGGAATTCCATATGTGTTTGCTCCATGTATTGCGGTAAAGAAGCAGTGTTTCAATATTCTGTTATTTGAATCATATGTAACATTGATCAAGTTTGCTGATATTTTGATGGACCATTCATTAACACAGGTCTGCAGAGATCCAAGGTGGGGACGTTGCTATGAAAGCTACAGTGAAGATCCTAAGATTGTTAAAACTATGACTGAAATTATACCTGGTCTTCAAGGAGATATTCCTGGCAATTCCAGGAAGGGAACTCCTTTTGTTGCTGGAAAGTAAGTTTTGCTTCAAGCTTTGTTTTGAAACGAAAATTTTAATGTCATAAGTCTTGTAGTTGTATGGTTGGTGATTTTCTATGAAGGGTTCAGAAACATGAAATACATTTATAATTTTTTTTTTGAAAAACATTTATAAATTCTTTTGAACATCCATAACTAAAGTTTCCTGGTAATAGCATTGTATTGATTTATATGTTTTCTTAATTACATTTGTTTTGTTTTGCCTGTTTCTGGTCATAAGTTTTATATCAGTGTGGCACTTGTTCAGCTTTCATCGGGGAAAATATGTTTGTTTAATGCGGTAGACCATACTGCAGACATGAGTTCCCCCATCAATCGGAGCATCAATTATTTACAGTAGATAAAGTTTATGTTTTCCTGGCTTTTTCATTCACCAAAATAAAAGGGAGAAGAAAAAGAAATAGAAAAGATGGTGGACCCATAAGCTTCTTTTTTATGGTCCTATGCCGTTATGATGGTCCCACACATATGGGTTTTTTCAAATCATTTGAATGGTTGGGCTTACCATATTATGCATTCAAATGGCTGGACCATCTATAATGTAAATACGACCATGCACACAATACACACAAAGATATGAGCTGCTAAAGTTGAATTATATATTAGGAGCCCAATTACACAAAAAGTCTTGGTCATAAAGCATGCATGCAATGTCTTTATCACACATAATTCATAAAGTTAAATAAATAGCACATTAAGGTAATGTATGTGTGTTTGATTCGATGTAATCAATAATTTTATCTTATAATTTATATATGATATGTTTAGATTTAATATTTCTGTGTCTGATTTCGAATGACAAAGTTTCCAATTTTCATATTAAATTAAATAATGAATAGCAGCTCATTTATTGTATGTATAGAACTGAAATAAAAATGACCCTTCATTTTTATTACTTTGACCCAGGAACAAGGTTGCAGCTTGTGCCAAGCATTTTGTGGGAGATGGTGGCACAACCAAGGGTATCAATGAGAACAATACTGTGATAAACTACAAAGGACTGCTCGGAATTCACATGCCAGCATACTATGACTCAATTATCAAGGGTGTTTCAACAGTTATGATCTCCTACACTAGCTGGAATGGGAAAAAGATGCATGCTAACCGTGATCTTGTCACTGGTTATCTCAAGAACAAACTGCGGTTCAGGGTAATACAATTTATCTAAATAGATTTCTAATGTAAAAAAATTGAACTTAAGTCACAAAAAGAAAGGAAAAGATGTAGATAGCTACATATCATGTAATTTTTCTTCCATCTTGTAGGGTTTTGTCATATCAGATTGGCAGGGTATTGACCGGATTACCTCTCCTCCTCATGCTAACTATTCATACTCTGTTGAAGCTGGTGTCAGTGCTGGAATTGATATGGTAAATATTATTTTCAGTTCATGCAGTAAACGAGAGAAACATAAACTGTGTTTTTTTTAGTCTGAAAGTTTAATATTTTGAAAAAAAATTCTAATTAACATTCACATTGTTTGCAGATTATGGTTCCCTATAACTTTACTGAGTTCATTGATGACCTAACCTTTCAAGTAAAGAACAATATTATCCCAATTAGCAGGATTGACGATGCTGTGGCAAGAATCTTAAGAGTAAAATTTACCATGGGCCTTTTTGAAAATCCACTCGCTGATCTAAGTCTCACAAACCAATTGGGTAGCAAGGTACATTTTCTTATGAATGCCATTTGAACATGTGCTGAATGCTTCATGCATTTTGAGTTTGTTTTGTTGATCGCATATCATGTCTTAAACAGGAACATAGAGAGTTAGCAAGAGAAGCTGTTCGGAAATCCCTAGTGCTGCTAAAGAATGGTAAATATGCAAACAAGCCACTGCTTCCCCTTCCCAAGAAAGCCTCAAAAGTCTTGGTTGCAGGAAGTCATGCTGACAATTTGGGTAATCAATGTGGTGGATGGACAATTACTTGGCAGGGACTTAGTGGTAGTGATCTTACAACGGGTAAGTCAACTCATTTAATGTGCACAAAAGTTACTTCGAAAAGCTATACAATTCTAGAATCCGCACTTAGAATGTCTGTTAGATTGTAATAGTTTTTATATATTACAGTTAGGATATCTAAAATTAAATGTCTATATAACAAATAGTATTCGGTTAATGATTCTTAGTCCAAGATGATTCTATGATTTCTTTCTTCCTGTCCGTAAACACAACTGGTAAGATGAAAAACATTCATACAGTGAGATATGTTTTTTTTTTCTCTTTCCATAGCATCCTTTTATGGGAAATTGTAAAACATCTGATAAGATTATTTTTTCCTGACAGGTACAACCATCCTTGATGCTATAAAACAAACAGTTGATCCTGCAACTGAAGTTGTCTACAACGAAAATCCAGATGCTAGTTTTATCAAGTCAAACAAATTTTCTTATGCCATAGTTATTGTGGGAGAAAAACCTTATGCTGAAACATTTGGTGACAGTTTGAATCTAACAATACCTGAGCCAGGTCCAAGCACCATCACCAATGTATGTGGCTCAATTCGATGTGTAGTTGTTCTCGTCACTGGGCGTCCGGTTGTGATTCAGCCATATCTATCAAAAATTGATGCACTTGTGGCTGCATGGCTTCCTGGCACTGAAGGCCAAGGTGTTACTGACGTTCTCTATGGTGACTTTGAATTCACTGGCAAACTGGCAAGGACATGGTTCAAGACAGTAGACCAGCTTCCAATGAATGTTGGCGATAAACATTATGATCCTCTATTTCCATTTGGATTTGGTTTGACTACAAACCTTACCAAATATTGA
Protein sequence

>MS.gene25841.t1

MGKSSIPVVGVLLLCFLVSFSEAEYRKYKDPKVPLNRRIKDLMSRMTLEEKIGQMTQLERSVATPEAMTKYFIGSVLSGGGSVPAEKASAETWVKMVNQIQNAALSTPLGIPMIYGIDAVHGHNNVYNATIFPHNVGLGVTRDPVLIKKIGEATALEVRATGIPYVFAPCIAVCRDPRWGRCYESYSEDPKIVKTMTEIIPGLQGDIPGNSRKGTPFVAGKNKVAACAKHFVGDGGTTKGINENNTVINYKGLLGIHMPAYYDSIIKGVSTVMISYTSWNGKKMHANRDLVTGYLKNKLRFRGFVISDWQGIDRITSPPHANYSYSVEAGVSAGIDMIMVPYNFTEFIDDLTFQVKNNIIPISRIDDAVARILRVKFTMGLFENPLADLSLTNQLGSKEHRELAREAVRKSLVLLKNGKYANKPLLPLPKKASKVLVAGSHADNLGNQCGGWTITWQGLSGSDLTTGTTILDAIKQTVDPATEVVYNENPDASFIKSNKFSYAIVIVGEKPYAETFGDSLNLTIPEPGPSTITNVCGSIRCVVVLVTGRPVVIQPYLSKIDALVAAWLPGTEGQGVTDVLYGDFEFTGKLARTWFKTVDQLPMNVGDKHYDPLFPFGFGLTTNLTKY