Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26719.t1 | XP_024637989.1 | 98.7 | 750 | 10 | 0 | 1 | 750 | 1 | 750 | 0.00E+00 | 1491.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26719.t1 | A0A396IHZ2 | 98.7 | 750 | 10 | 0 | 1 | 750 | 1 | 750 | 0.0e+00 | 1491.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049807 | MS.gene26719 | 0.819032 | 1.44E-52 | -1.69E-46 |
| MS.gene049887 | MS.gene26719 | 0.811812 | 5.81E-51 | -1.69E-46 |
| MS.gene050551 | MS.gene26719 | 0.819042 | 1.43E-52 | -1.69E-46 |
| MS.gene050838 | MS.gene26719 | 0.811377 | 7.22E-51 | -1.69E-46 |
| MS.gene051102 | MS.gene26719 | 0.8124 | 4.32E-51 | -1.69E-46 |
| MS.gene051381 | MS.gene26719 | 0.802617 | 5.15E-49 | -1.69E-46 |
| MS.gene052307 | MS.gene26719 | 0.838041 | 3.64E-57 | -1.69E-46 |
| MS.gene052397 | MS.gene26719 | 0.813614 | 2.34E-51 | -1.69E-46 |
| MS.gene052514 | MS.gene26719 | 0.808803 | 2.59E-50 | -1.69E-46 |
| MS.gene052516 | MS.gene26719 | 0.820009 | 8.60E-53 | -1.69E-46 |
| MS.gene052609 | MS.gene26719 | 0.825107 | 5.61E-54 | -1.69E-46 |
| MS.gene052732 | MS.gene26719 | 0.801274 | 9.73E-49 | -1.69E-46 |
| MS.gene053079 | MS.gene26719 | 0.808409 | 3.14E-50 | -1.69E-46 |
| MS.gene053143 | MS.gene26719 | 0.822179 | 2.72E-53 | -1.69E-46 |
| MS.gene053144 | MS.gene26719 | 0.828986 | 6.63E-55 | -1.69E-46 |
| MS.gene054584 | MS.gene26719 | 0.820946 | 5.24E-53 | -1.69E-46 |
| MS.gene054824 | MS.gene26719 | 0.817521 | 3.16E-52 | -1.69E-46 |
| MS.gene055465 | MS.gene26719 | 0.807215 | 5.64E-50 | -1.69E-46 |
| MS.gene055469 | MS.gene26719 | 0.851047 | 1.14E-60 | -1.69E-46 |
| MS.gene055513 | MS.gene26719 | 0.802449 | 5.58E-49 | -1.69E-46 |
| MS.gene055537 | MS.gene26719 | 0.806705 | 7.22E-50 | -1.69E-46 |
| MS.gene055891 | MS.gene26719 | 0.802042 | 6.77E-49 | -1.69E-46 |
| MS.gene056507 | MS.gene26719 | 0.843613 | 1.26E-58 | -1.69E-46 |
| MS.gene058668 | MS.gene26719 | 0.804236 | 2.38E-49 | -1.69E-46 |
| MS.gene059171 | MS.gene26719 | 0.819899 | 9.11E-53 | -1.69E-46 |
| MS.gene061006 | MS.gene26719 | 0.815222 | 1.03E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26719.t1 | MTR_2g018850 | 29.319 | 191 | 127 | 3 | 230 | 413 | 261 | 450 | 1.72e-18 | 90.5 |
| MS.gene26719.t1 | MTR_8g464800 | 29.834 | 181 | 121 | 4 | 492 | 666 | 1 | 181 | 2.44e-17 | 85.1 |
| MS.gene26719.t1 | MTR_5g081480 | 33.083 | 133 | 69 | 4 | 630 | 749 | 651 | 776 | 1.70e-15 | 81.3 |
| MS.gene26719.t1 | MTR_6g086685 | 28.378 | 148 | 101 | 2 | 276 | 419 | 37 | 183 | 3.41e-14 | 72.0 |
| MS.gene26719.t1 | MTR_7g090610 | 27.451 | 204 | 114 | 5 | 560 | 749 | 14 | 197 | 2.95e-13 | 72.4 |
| MS.gene26719.t1 | MTR_6g462630 | 36.134 | 119 | 63 | 4 | 640 | 749 | 39 | 153 | 4.18e-12 | 66.6 |
| MS.gene26719.t1 | MTR_0177s0050 | 25.000 | 152 | 111 | 2 | 192 | 342 | 238 | 387 | 8.67e-12 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26719.t1 | AT3G05850 | 57.997 | 769 | 295 | 7 | 7 | 748 | 4 | 771 | 0.0 | 884 |
| MS.gene26719.t1 | AT1G06740 | 35.195 | 591 | 356 | 10 | 175 | 747 | 141 | 722 | 3.64e-122 | 383 |
| MS.gene26719.t1 | AT1G64260 | 22.598 | 739 | 520 | 18 | 4 | 715 | 5 | 718 | 1.33e-40 | 159 |
| MS.gene26719.t1 | AT1G64260 | 22.598 | 739 | 520 | 18 | 4 | 715 | 5 | 718 | 1.33e-40 | 159 |
| MS.gene26719.t1 | AT1G49920 | 23.035 | 547 | 355 | 13 | 190 | 690 | 186 | 712 | 7.21e-33 | 136 |
| MS.gene26719.t1 | AT1G49920 | 23.035 | 547 | 355 | 13 | 190 | 690 | 186 | 712 | 7.21e-33 | 136 |
| MS.gene26719.t1 | AT1G64255 | 24.691 | 486 | 335 | 12 | 224 | 690 | 232 | 705 | 1.06e-29 | 126 |
| MS.gene26719.t1 | AT5G15685 | 30.242 | 248 | 164 | 5 | 190 | 432 | 183 | 426 | 2.14e-29 | 123 |
| MS.gene26719.t1 | AT1G64253 | 23.145 | 337 | 235 | 8 | 392 | 715 | 2 | 327 | 1.85e-19 | 91.7 |
| MS.gene26719.t1 | AT1G64253 | 23.629 | 237 | 169 | 5 | 487 | 715 | 19 | 251 | 9.04e-11 | 64.3 |
Find 164 sgRNAs with CRISPR-Local
Find 239 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCTTATGACATCAAATTT+TGG | 0.113475 | 8.2:+8760047 | MS.gene26719:CDS |
| CCTGCACAATCTCTTTGTTC+TGG | 0.154930 | 8.2:+8758901 | MS.gene26719:CDS |
| TCAATGGCTGCTACATTAAT+AGG | 0.174196 | 8.2:-8758829 | None:intergenic |
| GATTCAACCTGCTTTGATTT+TGG | 0.203125 | 8.2:-8760575 | None:intergenic |
| GATATCCTTTGGCCTGTAAT+TGG | 0.220676 | 8.2:-8759277 | None:intergenic |
| CAAACTGAACAAGGACTTAA+AGG | 0.227894 | 8.2:+8759836 | MS.gene26719:CDS |
| CTGCACAATCTCTTTGTTCT+GGG | 0.229547 | 8.2:+8758902 | MS.gene26719:CDS |
| AAATTGTTGATATTGATAAT+TGG | 0.248753 | 8.2:+8760309 | MS.gene26719:CDS |
| CGTAGTATTGAGAATATAAA+AGG | 0.273452 | 8.2:+8759942 | MS.gene26719:CDS |
| ATTGAAGCTGACGTTTAATT+AGG | 0.286176 | 8.2:-8760604 | None:intergenic |
| TCTTTGACGCTTGTCATCAT+TGG | 0.287688 | 8.2:-8758926 | None:intergenic |
| CAACTGGCATTGGTTTCTTC+AGG | 0.296129 | 8.2:+8759683 | MS.gene26719:CDS |
| CGCTAAAACTATTAAACCTT+TGG | 0.299997 | 8.2:-8758987 | None:intergenic |
| TCATTTCATGCCTCAATAAC+TGG | 0.305262 | 8.2:+8759510 | MS.gene26719:CDS |
| TGAAAGCTTCACCCAATTAC+AGG | 0.306875 | 8.2:+8759265 | MS.gene26719:CDS |
| AAAGTATCAAGGGGAATTAT+TGG | 0.307157 | 8.2:+8759587 | MS.gene26719:CDS |
| TGACATTGATCCATCTATAT+TGG | 0.310445 | 8.2:-8757331 | None:intergenic |
| GACGACATAAAGCGCGAGTA+TGG | 0.321301 | 8.2:+8759303 | MS.gene26719:CDS |
| ATGCCTCAATAACTGGTTTC+CGG | 0.324519 | 8.2:+8759517 | MS.gene26719:CDS |
| ACATCAATCATTTGAGTGAT+TGG | 0.329504 | 8.2:-8760110 | None:intergenic |
| ATGCCAGTTGTCTTCAGTTT+CGG | 0.342179 | 8.2:-8759670 | None:intergenic |
| GAGCGTCTGATGTTTCCTTT+TGG | 0.342716 | 8.2:-8760226 | None:intergenic |
| TACATTGCAATTGAAGGTTT+CGG | 0.348044 | 8.2:-8757427 | None:intergenic |
| ATGACCCAGTTGTATGCTTC+AGG | 0.348916 | 8.2:-8759972 | None:intergenic |
| TCATGAGGCCAGACGTTTCA+TGG | 0.355335 | 8.2:+8759869 | MS.gene26719:CDS |
| AGGCATGAAATGATACAAAA+AGG | 0.364107 | 8.2:-8759500 | None:intergenic |
| GGAGAGGGCGACAGGCTTGC+CGG | 0.366956 | 8.2:-8759536 | None:intergenic |
| TGCAAGGGATGGAAACTTAC+TGG | 0.367103 | 8.2:+8760341 | MS.gene26719:CDS |
| AAGATAAAAGAGACTAATCC+TGG | 0.383049 | 8.2:+8759432 | MS.gene26719:CDS |
| TGGACTGGTTTGTCAATATC+TGG | 0.384054 | 8.2:-8760488 | None:intergenic |
| AATTGTTGATATTGATAATT+GGG | 0.386007 | 8.2:+8760310 | MS.gene26719:CDS |
| AACATCAAGTACTTCCTTCC+TGG | 0.387501 | 8.2:+8757459 | MS.gene26719:CDS |
| ATGTCGTCTGCGATATCCTT+TGG | 0.391266 | 8.2:-8759288 | None:intergenic |
| TTTATCTTCTCACAAAAGAA+TGG | 0.413555 | 8.2:-8759417 | None:intergenic |
| TTTCTCCTGAAGCATACAAC+TGG | 0.416731 | 8.2:+8759967 | MS.gene26719:CDS |
| ATATCCTTTGGCCTGTAATT+GGG | 0.438933 | 8.2:-8759276 | None:intergenic |
| TGGATAATTTCCTCCTTGGA+TGG | 0.440016 | 8.2:-8760206 | None:intergenic |
| GAATTTGTAACCAATATAGA+TGG | 0.446033 | 8.2:+8757321 | MS.gene26719:CDS |
| GTCAAAGAGCGGCACAGCAG+TGG | 0.447669 | 8.2:+8758941 | MS.gene26719:CDS |
| CTTTGTAGCTGTAGCAGCCA+TGG | 0.451242 | 8.2:-8757268 | None:intergenic |
| TGCGGTAAATGCAAGGGACT+TGG | 0.451657 | 8.2:+8760626 | MS.gene26719:CDS |
| GGTGCTTACATTGCAATTGA+AGG | 0.452249 | 8.2:-8757433 | None:intergenic |
| CAATGGCTGCTACATTAATA+GGG | 0.455291 | 8.2:-8758828 | None:intergenic |
| AATGCATTGGACCAGTGCTC+TGG | 0.455861 | 8.2:-8760005 | None:intergenic |
| ATATTTGAAAACTGCTACCA+TGG | 0.456674 | 8.2:+8759789 | MS.gene26719:CDS |
| AAAGAATACTGTCAAGGAAA+AGG | 0.457231 | 8.2:-8759557 | None:intergenic |
| CATAAATACTCCATTGCTCA+TGG | 0.463415 | 8.2:+8759027 | MS.gene26719:CDS |
| AAGGAAGTACTTGATGTTCA+TGG | 0.465370 | 8.2:-8757454 | None:intergenic |
| ATGCCTCTTTATAAGAGCCT+TGG | 0.465522 | 8.2:-8759383 | None:intergenic |
| GGTATCTAGCGACTAGAGGT+TGG | 0.468305 | 8.2:+8759217 | MS.gene26719:CDS |
| AATGCATTGCTCAGCATCAA+TGG | 0.471564 | 8.2:-8758845 | None:intergenic |
| CTGTCTTTGAATGTGTTGGT+AGG | 0.475394 | 8.2:+8760387 | MS.gene26719:CDS |
| ATCATTAACCATGAAACGTC+TGG | 0.476096 | 8.2:-8759877 | None:intergenic |
| ATATCTGGCAGAGCGTGAAT+TGG | 0.476248 | 8.2:-8760473 | None:intergenic |
| GCAAGGGACTTGGCCACAAT+CGG | 0.477266 | 8.2:+8760636 | MS.gene26719:CDS |
| TGCAACATTCACGACAAAAG+AGG | 0.481312 | 8.2:+8759461 | MS.gene26719:CDS |
| AAACTGAACAAGGACTTAAA+GGG | 0.481927 | 8.2:+8759837 | MS.gene26719:CDS |
| AAGGAAAAGGAGAGGGCGAC+AGG | 0.485747 | 8.2:-8759544 | None:intergenic |
| GTAAATCTCAAGGCTGTCCC+TGG | 0.488941 | 8.2:+8759100 | MS.gene26719:CDS |
| ATGCCGAAACTGAAGACAAC+TGG | 0.490063 | 8.2:+8759667 | MS.gene26719:CDS |
| TCCTTCACAAGTATGATCTC+TGG | 0.490803 | 8.2:-8759178 | None:intergenic |
| CAAGGAGGAAATTATCCAAA+AGG | 0.490970 | 8.2:+8760211 | MS.gene26719:CDS |
| AATTCTCAACTGTGAAGTAT+CGG | 0.493598 | 8.2:-8760430 | None:intergenic |
| TTATGCAATTGACATTGATC+AGG | 0.494241 | 8.2:+8757371 | MS.gene26719:CDS |
| CGACCAGGAGGACGCTTAGT+TGG | 0.496692 | 8.2:-8760551 | None:intergenic |
| TGGTCCAATGCATTCTTCAA+TGG | 0.497526 | 8.2:+8760014 | MS.gene26719:CDS |
| ATTGCTGTCTTTGAATGTGT+TGG | 0.497680 | 8.2:+8760383 | MS.gene26719:CDS |
| CTTTGACGCATATATTCTCC+AGG | 0.498153 | 8.2:-8759118 | None:intergenic |
| TGCTGCTTACGCATCCAAAC+CGG | 0.499342 | 8.2:+8759908 | MS.gene26719:CDS |
| CATCCAACATGCCTGCTAGT+AGG | 0.501700 | 8.2:+8757604 | MS.gene26719:CDS |
| CAAACCAGTCCAGGTTGAAT+CGG | 0.503060 | 8.2:+8760499 | MS.gene26719:CDS |
| GTTTGCACGTCTTCCGATTG+TGG | 0.503969 | 8.2:-8760649 | None:intergenic |
| AGATAAGGATTTACAGCGAA+TGG | 0.507254 | 8.2:+8757512 | MS.gene26719:CDS |
| ATTCTCAACTGTGAAGTATC+GGG | 0.507704 | 8.2:-8760429 | None:intergenic |
| CTTCCATAGCCGATTCAACC+TGG | 0.511413 | 8.2:-8760508 | None:intergenic |
| ATCAGACGCTCGCTCACTAC+AGG | 0.514275 | 8.2:+8760238 | MS.gene26719:CDS |
| CCAGAACAAAGAGATTGTGC+AGG | 0.515447 | 8.2:-8758901 | None:intergenic |
| CATTACAGTGTCGAAAGATA+AGG | 0.518292 | 8.2:+8757497 | MS.gene26719:CDS |
| TCAAAGAGCGGCACAGCAGT+GGG | 0.518340 | 8.2:+8758942 | MS.gene26719:CDS |
| CCTTGTTCAGTTTGTCAGCA+AGG | 0.518369 | 8.2:-8759827 | None:intergenic |
| ATCGGGAACAATAATCATAT+AGG | 0.518434 | 8.2:-8760412 | None:intergenic |
| TGCTCCATTGAAGAATGCAT+TGG | 0.520736 | 8.2:-8760018 | None:intergenic |
| TGCACAATCTCTTTGTTCTG+GGG | 0.521328 | 8.2:+8758903 | MS.gene26719:CDS |
| TCTACAACAGCAAAGGCTAC+AGG | 0.521980 | 8.2:-8759645 | None:intergenic |
| AAACTGAAGACAACTGGCAT+TGG | 0.522078 | 8.2:+8759673 | MS.gene26719:CDS |
| GTATCTAGCGACTAGAGGTT+GGG | 0.523441 | 8.2:+8759218 | MS.gene26719:CDS |
| AGTTAAATTATTCTCAAGCA+TGG | 0.524598 | 8.2:+8759331 | MS.gene26719:CDS |
| CCAGGAGGACGCTTAGTTGG+TGG | 0.525231 | 8.2:-8760548 | None:intergenic |
| GAAGGATCTGTTGTCAAAGC+TGG | 0.530564 | 8.2:+8759195 | MS.gene26719:CDS |
| ACGACATAAAGCGCGAGTAT+GGG | 0.531442 | 8.2:+8759304 | MS.gene26719:CDS |
| TGTCTTTGAATGTGTTGGTA+GGG | 0.532718 | 8.2:+8760388 | MS.gene26719:CDS |
| AACAATTAGCACACGACGAG+AGG | 0.534057 | 8.2:+8760154 | MS.gene26719:CDS |
| GTGAATAACTACCTACTAGC+AGG | 0.540396 | 8.2:-8757615 | None:intergenic |
| TTGCCGGAAACCAGTTATTG+AGG | 0.542162 | 8.2:-8759520 | None:intergenic |
| TTGGCTGCAACTTCTGTCGA+TGG | 0.542172 | 8.2:+8759606 | MS.gene26719:CDS |
| CCACCAACTAAGCGTCCTCC+TGG | 0.542401 | 8.2:+8760548 | MS.gene26719:CDS |
| CAGTGGGAAAATACCATCAC+TGG | 0.547435 | 8.2:+8758958 | MS.gene26719:CDS |
| ACATTAATAGGGATAACAAC+AGG | 0.549105 | 8.2:-8758817 | None:intergenic |
| AGTCCAGGTTGAATCGGCTA+TGG | 0.549247 | 8.2:+8760505 | MS.gene26719:CDS |
| ATAGCCGATTCAACCTGGAC+TGG | 0.549788 | 8.2:-8760503 | None:intergenic |
| GAGGACGCTTAGTTGGTGGA+GGG | 0.559572 | 8.2:-8760544 | None:intergenic |
| GCTTCAATGCGGTAAATGCA+AGG | 0.559948 | 8.2:+8760619 | MS.gene26719:CDS |
| CCTTGCTGACAAACTGAACA+AGG | 0.563477 | 8.2:+8759827 | MS.gene26719:CDS |
| AGATATTGACAAACCAGTCC+AGG | 0.565631 | 8.2:+8760490 | MS.gene26719:CDS |
| ACTCCAAGGCTCTTATAAAG+AGG | 0.566265 | 8.2:+8759380 | MS.gene26719:CDS |
| ACCAGAGATCATACTTGTGA+AGG | 0.566536 | 8.2:+8759177 | MS.gene26719:CDS |
| GTGAATGTTGCAAAACTCCC+AGG | 0.568807 | 8.2:-8759450 | None:intergenic |
| CAATAGCATGGCAGCAAGGA+AGG | 0.574571 | 8.2:-8760364 | None:intergenic |
| ACTTCTGTCGATGGAAATGA+TGG | 0.575330 | 8.2:+8759615 | MS.gene26719:CDS |
| GGAGGACGCTTAGTTGGTGG+AGG | 0.576697 | 8.2:-8760545 | None:intergenic |
| TACAAAGTGAGCCAGAGCAC+TGG | 0.579145 | 8.2:+8759994 | MS.gene26719:CDS |
| CTACAGGTGTTGCTTTCACA+AGG | 0.581162 | 8.2:+8760254 | MS.gene26719:CDS |
| AACAAAATTGACACCATCCA+AGG | 0.581806 | 8.2:+8760193 | MS.gene26719:CDS |
| TAATTGGGATTGTAGCTGCA+AGG | 0.582427 | 8.2:+8760325 | MS.gene26719:CDS |
| AGTATTTATGCAATGCCTCT+CGG | 0.582480 | 8.2:-8759014 | None:intergenic |
| TGGTCGGCCAAAATCAAAGC+AGG | 0.582545 | 8.2:+8760568 | MS.gene26719:CDS |
| AGTTTAAAAGAATACTGTCA+AGG | 0.583589 | 8.2:-8759563 | None:intergenic |
| TTTAAACTCAAAGTATCAAG+GGG | 0.584199 | 8.2:+8759578 | MS.gene26719:CDS |
| GTTTGTTATAAATGAGGAAG+TGG | 0.587142 | 8.2:+8757569 | MS.gene26719:CDS |
| AGATAAAAGAGACTAATCCT+GGG | 0.595650 | 8.2:+8759433 | MS.gene26719:CDS |
| GACGAGAGGAGTCTAATCAA+TGG | 0.596180 | 8.2:+8760168 | MS.gene26719:CDS |
| TGATGTGTTTGTTATAAATG+AGG | 0.598386 | 8.2:+8757563 | MS.gene26719:CDS |
| GTAAGCAAAACCATGAGCAA+TGG | 0.599165 | 8.2:-8759037 | None:intergenic |
| ACGGTCAAATGTAAATCTCA+AGG | 0.600516 | 8.2:+8759090 | MS.gene26719:CDS |
| CCTTTGGTCTACACCAGTGA+TGG | 0.601976 | 8.2:-8758971 | None:intergenic |
| CTAGCGACTAGAGGTTGGGT+GGG | 0.602185 | 8.2:+8759222 | MS.gene26719:CDS |
| AAATGATAGTCATCGGGTCA+CGG | 0.602533 | 8.2:+8759071 | MS.gene26719:CDS |
| TAAATGAGGAAGTGGCGGCT+CGG | 0.605746 | 8.2:+8757577 | MS.gene26719:CDS |
| CAGAACAAAGAGATTGTGCA+GGG | 0.608579 | 8.2:-8758900 | None:intergenic |
| GGGATTGTAGCTGCAAGGGA+TGG | 0.612068 | 8.2:+8760330 | MS.gene26719:CDS |
| CTACCTACTAGCAGGCATGT+TGG | 0.612141 | 8.2:-8757607 | None:intergenic |
| TACTGTCAAGGAAAAGGAGA+GGG | 0.612619 | 8.2:-8759551 | None:intergenic |
| CAACTAAGCGTCCTCCTGGT+CGG | 0.615992 | 8.2:+8760552 | MS.gene26719:CDS |
| GCTGGGTATCTAGCGACTAG+AGG | 0.616757 | 8.2:+8759213 | MS.gene26719:CDS |
| TCTAGCGACTAGAGGTTGGG+TGG | 0.617977 | 8.2:+8759221 | MS.gene26719:CDS |
| TTCGGCATCTACAACAGCAA+AGG | 0.618419 | 8.2:-8759652 | None:intergenic |
| ATAGCTATATGTCAATCAAG+AGG | 0.619889 | 8.2:+8757297 | MS.gene26719:CDS |
| GGTACCACATTTGAAGTCTG+TGG | 0.619906 | 8.2:+8760275 | MS.gene26719:CDS |
| TTCACCCAATTACAGGCCAA+AGG | 0.626468 | 8.2:+8759272 | MS.gene26719:CDS |
| CTTCAATGCGGTAAATGCAA+GGG | 0.629621 | 8.2:+8760620 | MS.gene26719:CDS |
| GATGGATCAATGTCATACAA+TGG | 0.629781 | 8.2:+8757339 | MS.gene26719:CDS |
| AATTGGGATTGTAGCTGCAA+GGG | 0.630644 | 8.2:+8760326 | MS.gene26719:CDS |
| TGTTATAAATGAGGAAGTGG+CGG | 0.631535 | 8.2:+8757572 | MS.gene26719:CDS |
| AAGGATCTGTTGTCAAAGCT+GGG | 0.632336 | 8.2:+8759196 | MS.gene26719:CDS |
| ACAGCAATAGCATGGCAGCA+AGG | 0.633671 | 8.2:-8760368 | None:intergenic |
| CCATCACTGGTGTAGACCAA+AGG | 0.634322 | 8.2:+8758971 | MS.gene26719:CDS |
| TTCTCCTGAAGCATACAACT+GGG | 0.635931 | 8.2:+8759968 | MS.gene26719:CDS |
| TGTATTACGAGGTAACATGA+TGG | 0.636401 | 8.2:+8760130 | MS.gene26719:CDS |
| AAAGGGACAATTATCTCATG+AGG | 0.640743 | 8.2:+8759854 | MS.gene26719:CDS |
| ATTGCTAGAGAGCAACTCCA+AGG | 0.645401 | 8.2:+8759366 | MS.gene26719:CDS |
| ATGCATTCTTCAATGGAGCA+AGG | 0.649814 | 8.2:+8760021 | MS.gene26719:CDS |
| ATTCAAAGACAGCAATAGCA+TGG | 0.650011 | 8.2:-8760376 | None:intergenic |
| CTTGATGCAAATCAACTGAG+TGG | 0.664605 | 8.2:-8759148 | None:intergenic |
| AGGACGCTTAGTTGGTGGAG+GGG | 0.666771 | 8.2:-8760543 | None:intergenic |
| TTGTCCACAGACTTCAAATG+TGG | 0.667756 | 8.2:-8760279 | None:intergenic |
| TGATGACAAGCGTCAAAGAG+CGG | 0.668148 | 8.2:+8758930 | MS.gene26719:CDS |
| GGTGACGTAAACAATAGCCA+TGG | 0.679312 | 8.2:-8759806 | None:intergenic |
| CAAATGATTGATGTATTACG+AGG | 0.686709 | 8.2:+8760119 | MS.gene26719:CDS |
| TTTGACGCATATATTCTCCA+GGG | 0.695094 | 8.2:-8759117 | None:intergenic |
| ATACTGTCAAGGAAAAGGAG+AGG | 0.711175 | 8.2:-8759552 | None:intergenic |
| AAAATTGACACCATCCAAGG+AGG | 0.714232 | 8.2:+8760196 | MS.gene26719:CDS |
| GGATCAATGTCATACAATGG+TGG | 0.721707 | 8.2:+8757342 | MS.gene26719:CDS |
| ATTAAACGTCAGCTTCAATG+CGG | 0.724013 | 8.2:+8760608 | MS.gene26719:CDS |
| AGAACAAAGAGATTGTGCAG+GGG | 0.737676 | 8.2:-8758899 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATATTTTTACAATTATAC+AGG | - | chr8.2:8758156-8758175 | None:intergenic | 10.0% |
| !!! | AATATTTTTACAATTATACA+GGG | - | chr8.2:8758155-8758174 | None:intergenic | 10.0% |
| !!! | ATTAAGTTTTTATCAAAAAT+AGG | - | chr8.2:8758511-8758530 | None:intergenic | 10.0% |
| !!! | TTAAGTTTTTATCAAAAATA+GGG | - | chr8.2:8758510-8758529 | None:intergenic | 10.0% |
| !! | AAAAGATATGAATCTAAATT+GGG | - | chr8.2:8758717-8758736 | None:intergenic | 15.0% |
| !! | AGATATCATATAGTTTAAAT+TGG | + | chr8.2:8757697-8757716 | MS.gene26719:intron | 15.0% |
| !! | ATAAAAAAAATGATAGTCAT+CGG | + | chr8.2:8759064-8759083 | MS.gene26719:CDS | 15.0% |
| !! | TAAAAGATATGAATCTAAAT+TGG | - | chr8.2:8758718-8758737 | None:intergenic | 15.0% |
| !!! | AAATTGTTGATATTGATAAT+TGG | + | chr8.2:8760309-8760328 | MS.gene26719:CDS | 15.0% |
| !!! | AATTGTTGATATTGATAATT+GGG | + | chr8.2:8760310-8760329 | MS.gene26719:CDS | 15.0% |
| !!! | TTTATTTTATCTTTTGTTGA+AGG | - | chr8.2:8758557-8758576 | None:intergenic | 15.0% |
| !! | ACCATATTAAAATGAACATA+AGG | - | chr8.2:8758095-8758114 | None:intergenic | 20.0% |
| !! | TAAAAAAAATGATAGTCATC+GGG | + | chr8.2:8759065-8759084 | MS.gene26719:CDS | 20.0% |
| !!! | AATCTTATGACATCAAATTT+TGG | + | chr8.2:8760047-8760066 | MS.gene26719:CDS | 20.0% |
| !!! | ATCTTATGACATCAAATTTT+GGG | + | chr8.2:8760048-8760067 | MS.gene26719:CDS | 20.0% |
| !!! | GGAAAATTTTATAGAACATT+TGG | + | chr8.2:8758752-8758771 | MS.gene26719:intron | 20.0% |
| !!! | TCCTTATGTTCATTTTAATA+TGG | + | chr8.2:8758091-8758110 | MS.gene26719:intron | 20.0% |
| !!! | TTTTAAACTCAAAGTATCAA+GGG | + | chr8.2:8759577-8759596 | MS.gene26719:CDS | 20.0% |
| ! | AATAGTCATAATATATGCCA+TGG | - | chr8.2:8758036-8758055 | None:intergenic | 25.0% |
| ! | ACTTATTTGATCTTATTGAC+CGG | - | chr8.2:8758681-8758700 | None:intergenic | 25.0% |
| ! | AGTTAAATTATTCTCAAGCA+TGG | + | chr8.2:8759331-8759350 | MS.gene26719:CDS | 25.0% |
| ! | AGTTTAAAAGAATACTGTCA+AGG | - | chr8.2:8759566-8759585 | None:intergenic | 25.0% |
| ! | ATGATATCTATCAATAGCAA+AGG | - | chr8.2:8757686-8757705 | None:intergenic | 25.0% |
| ! | GAATTTGTAACCAATATAGA+TGG | + | chr8.2:8757321-8757340 | MS.gene26719:CDS | 25.0% |
| ! | TATGATGAGATTCACAATTT+GGG | + | chr8.2:8758342-8758361 | MS.gene26719:intron | 25.0% |
| ! | TGGCATATATTATGACTATT+CGG | + | chr8.2:8758036-8758055 | MS.gene26719:intron | 25.0% |
| ! | TTATGATGAGATTCACAATT+TGG | + | chr8.2:8758341-8758360 | MS.gene26719:intron | 25.0% |
| ! | TTTATCTTCTCACAAAAGAA+TGG | - | chr8.2:8759420-8759439 | None:intergenic | 25.0% |
| !! | AATAAGTTGAAAACAGCTTA+TGG | + | chr8.2:8758637-8758656 | MS.gene26719:intron | 25.0% |
| !! | CGTAGTATTGAGAATATAAA+AGG | + | chr8.2:8759942-8759961 | MS.gene26719:CDS | 25.0% |
| !! | TCTTTTACATGTGAATTGTT+TGG | + | chr8.2:8758731-8758750 | MS.gene26719:intron | 25.0% |
| !! | TTTAAACTCAAAGTATCAAG+GGG | + | chr8.2:8759578-8759597 | MS.gene26719:CDS | 25.0% |
| !!! | CTTTTAAACTCAAAGTATCA+AGG | + | chr8.2:8759576-8759595 | MS.gene26719:CDS | 25.0% |
| !!! | TGATGTGTTTGTTATAAATG+AGG | + | chr8.2:8757563-8757582 | MS.gene26719:CDS | 25.0% |
| AAACTGAACAAGGACTTAAA+GGG | + | chr8.2:8759837-8759856 | MS.gene26719:CDS | 30.0% | |
| AAAGAATACTGTCAAGGAAA+AGG | - | chr8.2:8759560-8759579 | None:intergenic | 30.0% | |
| AAGATAAAAGAGACTAATCC+TGG | + | chr8.2:8759432-8759451 | MS.gene26719:CDS | 30.0% | |
| AAGTTATTCTGTAGAGCTTA+TGG | + | chr8.2:8758613-8758632 | MS.gene26719:intron | 30.0% | |
| AATTCTCAACTGTGAAGTAT+CGG | - | chr8.2:8760433-8760452 | None:intergenic | 30.0% | |
| ACATCAATCATTTGAGTGAT+TGG | - | chr8.2:8760113-8760132 | None:intergenic | 30.0% | |
| ACATTAATAGGGATAACAAC+AGG | - | chr8.2:8758820-8758839 | None:intergenic | 30.0% | |
| AGATAAAAGAGACTAATCCT+GGG | + | chr8.2:8759433-8759452 | MS.gene26719:CDS | 30.0% | |
| AGGCATGAAATGATACAAAA+AGG | - | chr8.2:8759503-8759522 | None:intergenic | 30.0% | |
| ATACTACGTTCAAAAATCTC+CGG | - | chr8.2:8759930-8759949 | None:intergenic | 30.0% | |
| ATAGCTATATGTCAATCAAG+AGG | + | chr8.2:8757297-8757316 | MS.gene26719:CDS | 30.0% | |
| ATATTTGAAAACTGCTACCA+TGG | + | chr8.2:8759789-8759808 | MS.gene26719:CDS | 30.0% | |
| ATCAAATAAGTCAATCCAAC+TGG | + | chr8.2:8758690-8758709 | MS.gene26719:intron | 30.0% | |
| ATCGGGAACAATAATCATAT+AGG | - | chr8.2:8760415-8760434 | None:intergenic | 30.0% | |
| ATTGAAGCTGACGTTTAATT+AGG | - | chr8.2:8760607-8760626 | None:intergenic | 30.0% | |
| CAAATGATTGATGTATTACG+AGG | + | chr8.2:8760119-8760138 | MS.gene26719:CDS | 30.0% | |
| CAATCGATACAAATATCTAG+TGG | + | chr8.2:8757827-8757846 | MS.gene26719:intron | 30.0% | |
| CGCTAAAACTATTAAACCTT+TGG | - | chr8.2:8758990-8759009 | None:intergenic | 30.0% | |
| GTTAACCATGCTGTAAAATA+TGG | - | chr8.2:8757793-8757812 | None:intergenic | 30.0% | |
| TACATTGCAATTGAAGGTTT+CGG | - | chr8.2:8757430-8757449 | None:intergenic | 30.0% | |
| TCAAATAAGTCAATCCAACT+GGG | + | chr8.2:8758691-8758710 | MS.gene26719:intron | 30.0% | |
| TGACATTGATCCATCTATAT+TGG | - | chr8.2:8757334-8757353 | None:intergenic | 30.0% | |
| TTATGCAATTGACATTGATC+AGG | + | chr8.2:8757371-8757390 | MS.gene26719:CDS | 30.0% | |
| ! | AAAGTATCAAGGGGAATTAT+TGG | + | chr8.2:8759587-8759606 | MS.gene26719:CDS | 30.0% |
| ! | GTTTTCAAATATCTCAGACA+AGG | - | chr8.2:8759781-8759800 | None:intergenic | 30.0% |
| ! | TTGAACCATATTTTACAGCA+TGG | + | chr8.2:8757785-8757804 | MS.gene26719:intron | 30.0% |
| ! | TTGTTGCAGATTTTCAGAAT+GGG | + | chr8.2:8759745-8759764 | MS.gene26719:CDS | 30.0% |
| ! | TTTGTTGCAGATTTTCAGAA+TGG | + | chr8.2:8759744-8759763 | MS.gene26719:CDS | 30.0% |
| !! | GTTTGTTATAAATGAGGAAG+TGG | + | chr8.2:8757569-8757588 | MS.gene26719:CDS | 30.0% |
| !! | TATAGAACATTTGGTAATGC+AGG | + | chr8.2:8758761-8758780 | MS.gene26719:intron | 30.0% |
| AAAGGGACAATTATCTCATG+AGG | + | chr8.2:8759854-8759873 | MS.gene26719:CDS | 35.0% | |
| AACAAAATTGACACCATCCA+AGG | + | chr8.2:8760193-8760212 | MS.gene26719:CDS | 35.0% | |
| AATGAACCAAGACTCAAACA+GGG | - | chr8.2:8757877-8757896 | None:intergenic | 35.0% | |
| ACGGTCAAATGTAAATCTCA+AGG | + | chr8.2:8759090-8759109 | MS.gene26719:CDS | 35.0% | |
| AGATAAGGATTTACAGCGAA+TGG | + | chr8.2:8757512-8757531 | MS.gene26719:CDS | 35.0% | |
| AGATTCACAATTTGGGAAGT+AGG | + | chr8.2:8758349-8758368 | MS.gene26719:intron | 35.0% | |
| AGTATTTATGCAATGCCTCT+CGG | - | chr8.2:8759017-8759036 | None:intergenic | 35.0% | |
| ATATCCTTTGGCCTGTAATT+GGG | - | chr8.2:8759279-8759298 | None:intergenic | 35.0% | |
| ATCATTAACCATGAAACGTC+TGG | - | chr8.2:8759880-8759899 | None:intergenic | 35.0% | |
| ATGAACCATGCTGTAAAATG+TGG | - | chr8.2:8758223-8758242 | None:intergenic | 35.0% | |
| ATGATGTCTATCGATAGCAA+AGG | - | chr8.2:8758119-8758138 | None:intergenic | 35.0% | |
| ATGGAAACAAGCGTAAAACA+TGG | - | chr8.2:8758410-8758429 | None:intergenic | 35.0% | |
| ATGGTTGTGACCAAAATGAA+TGG | + | chr8.2:8758010-8758029 | MS.gene26719:intron | 35.0% | |
| ATTAAACGTCAGCTTCAATG+CGG | + | chr8.2:8760608-8760627 | MS.gene26719:CDS | 35.0% | |
| ATTCAAAGACAGCAATAGCA+TGG | - | chr8.2:8760379-8760398 | None:intergenic | 35.0% | |
| ATTGCTGTCTTTGAATGTGT+TGG | + | chr8.2:8760383-8760402 | MS.gene26719:CDS | 35.0% | |
| CAAACTGAACAAGGACTTAA+AGG | + | chr8.2:8759836-8759855 | MS.gene26719:CDS | 35.0% | |
| CAAGGAGGAAATTATCCAAA+AGG | + | chr8.2:8760211-8760230 | MS.gene26719:CDS | 35.0% | |
| CAATGGCTGCTACATTAATA+GGG | - | chr8.2:8758831-8758850 | None:intergenic | 35.0% | |
| CAGGGATTCATCTTCAAAAT+AGG | - | chr8.2:8757859-8757878 | None:intergenic | 35.0% | |
| CATAAATACTCCATTGCTCA+TGG | + | chr8.2:8759027-8759046 | MS.gene26719:CDS | 35.0% | |
| CCAATGTCTAACATATGCTA+TGG | - | chr8.2:8758487-8758506 | None:intergenic | 35.0% | |
| CCATAGCATATGTTAGACAT+TGG | + | chr8.2:8758484-8758503 | MS.gene26719:intron | 35.0% | |
| CTGTGATGTGATTCACAATT+CGG | + | chr8.2:8757915-8757934 | MS.gene26719:intron | 35.0% | |
| GAAATGATACAAAAAGGCGA+TGG | - | chr8.2:8759497-8759516 | None:intergenic | 35.0% | |
| GATGGATCAATGTCATACAA+TGG | + | chr8.2:8757339-8757358 | MS.gene26719:CDS | 35.0% | |
| TAATGAACCAAGACTCAAAC+AGG | - | chr8.2:8757878-8757897 | None:intergenic | 35.0% | |
| TCAATGGCTGCTACATTAAT+AGG | - | chr8.2:8758832-8758851 | None:intergenic | 35.0% | |
| TCATTTCATGCCTCAATAAC+TGG | + | chr8.2:8759510-8759529 | MS.gene26719:CDS | 35.0% | |
| TGATTCACAATTCGGAAAGT+AGG | + | chr8.2:8757923-8757942 | MS.gene26719:intron | 35.0% | |
| TGTATTACGAGGTAACATGA+TGG | + | chr8.2:8760130-8760149 | MS.gene26719:CDS | 35.0% | |
| TGTTATAAATGAGGAAGTGG+CGG | + | chr8.2:8757572-8757591 | MS.gene26719:CDS | 35.0% | |
| TTTGACGCATATATTCTCCA+GGG | - | chr8.2:8759120-8759139 | None:intergenic | 35.0% | |
| ! | ACGTAGGTCGGATTTTTATA+TGG | - | chr8.2:8758429-8758448 | None:intergenic | 35.0% |
| ! | ATTCTCAACTGTGAAGTATC+GGG | - | chr8.2:8760432-8760451 | None:intergenic | 35.0% |
| ! | ATTTTATTGTTGGGTGTCAG+AGG | + | chr8.2:8760076-8760095 | MS.gene26719:CDS | 35.0% |
| ! | CATGTTTTACAGTTGTCATC+CGG | + | chr8.2:8757982-8758001 | MS.gene26719:intron | 35.0% |
| ! | CATTACAGTGTCGAAAGATA+AGG | + | chr8.2:8757497-8757516 | MS.gene26719:CDS | 35.0% |
| ! | CTTTTGGATAATTTCCTCCT+TGG | - | chr8.2:8760213-8760232 | None:intergenic | 35.0% |
| ! | TATGCTATGGCCATTCATTT+TGG | - | chr8.2:8758474-8758493 | None:intergenic | 35.0% |
| ! | TCTAACCACATTTTACAGCA+TGG | + | chr8.2:8758215-8758234 | MS.gene26719:intron | 35.0% |
| ! | TGGGCAGCAATTTTATTGTT+GGG | + | chr8.2:8760067-8760086 | MS.gene26719:CDS | 35.0% |
| ! | TGTCTTTGAATGTGTTGGTA+GGG | + | chr8.2:8760388-8760407 | MS.gene26719:CDS | 35.0% |
| ! | TTGGGCAGCAATTTTATTGT+TGG | + | chr8.2:8760066-8760085 | MS.gene26719:CDS | 35.0% |
| !! | AAGGAAGTACTTGATGTTCA+TGG | - | chr8.2:8757457-8757476 | None:intergenic | 35.0% |
| !! | GATTCAACCTGCTTTGATTT+TGG | - | chr8.2:8760578-8760597 | None:intergenic | 35.0% |
| AAAATTGACACCATCCAAGG+AGG | + | chr8.2:8760196-8760215 | MS.gene26719:CDS | 40.0% | |
| AAACTGAAGACAACTGGCAT+TGG | + | chr8.2:8759673-8759692 | MS.gene26719:CDS | 40.0% | |
| AAATGATAGTCATCGGGTCA+CGG | + | chr8.2:8759071-8759090 | MS.gene26719:CDS | 40.0% | |
| AACATCAAGTACTTCCTTCC+TGG | + | chr8.2:8757459-8757478 | MS.gene26719:CDS | 40.0% | |
| AAGGATCTGTTGTCAAAGCT+GGG | + | chr8.2:8759196-8759215 | MS.gene26719:CDS | 40.0% | |
| AATGCATTGCTCAGCATCAA+TGG | - | chr8.2:8758848-8758867 | None:intergenic | 40.0% | |
| AATTGGGATTGTAGCTGCAA+GGG | + | chr8.2:8760326-8760345 | MS.gene26719:CDS | 40.0% | |
| ACCAGAGATCATACTTGTGA+AGG | + | chr8.2:8759177-8759196 | MS.gene26719:CDS | 40.0% | |
| ACGTTCAAAAATCTCCGGTT+TGG | - | chr8.2:8759925-8759944 | None:intergenic | 40.0% | |
| ACTCCAAGGCTCTTATAAAG+AGG | + | chr8.2:8759380-8759399 | MS.gene26719:CDS | 40.0% | |
| ACTTCTGTCGATGGAAATGA+TGG | + | chr8.2:8759615-8759634 | MS.gene26719:CDS | 40.0% | |
| AGAACAAAGAGATTGTGCAG+GGG | - | chr8.2:8758902-8758921 | None:intergenic | 40.0% | |
| AGATATTGACAAACCAGTCC+AGG | + | chr8.2:8760490-8760509 | MS.gene26719:CDS | 40.0% | |
| ATACTGTCAAGGAAAAGGAG+AGG | - | chr8.2:8759555-8759574 | None:intergenic | 40.0% | |
| ATGAATCCCTGTTTGAGTCT+TGG | + | chr8.2:8757868-8757887 | MS.gene26719:intron | 40.0% | |
| ATGCATTCTTCAATGGAGCA+AGG | + | chr8.2:8760021-8760040 | MS.gene26719:CDS | 40.0% | |
| ATGCCAGTTGTCTTCAGTTT+CGG | - | chr8.2:8759673-8759692 | None:intergenic | 40.0% | |
| ATGCCTCTTTATAAGAGCCT+TGG | - | chr8.2:8759386-8759405 | None:intergenic | 40.0% | |
| CAGAACAAAGAGATTGTGCA+GGG | - | chr8.2:8758903-8758922 | None:intergenic | 40.0% | |
| CGGATGACAACTGTAAAACA+TGG | - | chr8.2:8757984-8758003 | None:intergenic | 40.0% | |
| CTGCACAATCTCTTTGTTCT+GGG | + | chr8.2:8758902-8758921 | MS.gene26719:CDS | 40.0% | |
| CTTCAATGCGGTAAATGCAA+GGG | + | chr8.2:8760620-8760639 | MS.gene26719:CDS | 40.0% | |
| CTTGATGCAAATCAACTGAG+TGG | - | chr8.2:8759151-8759170 | None:intergenic | 40.0% | |
| CTTTGACGCATATATTCTCC+AGG | - | chr8.2:8759121-8759140 | None:intergenic | 40.0% | |
| GAATCACATCACAGTGAATC+AGG | - | chr8.2:8757909-8757928 | None:intergenic | 40.0% | |
| GATATCCTTTGGCCTGTAAT+TGG | - | chr8.2:8759280-8759299 | None:intergenic | 40.0% | |
| GATATGTCAAGTGCTTATGC+CGG | + | chr8.2:8758659-8758678 | MS.gene26719:intron | 40.0% | |
| GGATCAATGTCATACAATGG+TGG | + | chr8.2:8757342-8757361 | MS.gene26719:CDS | 40.0% | |
| GGTGCTTACATTGCAATTGA+AGG | - | chr8.2:8757436-8757455 | None:intergenic | 40.0% | |
| GTAAGCAAAACCATGAGCAA+TGG | - | chr8.2:8759040-8759059 | None:intergenic | 40.0% | |
| GTGAATAACTACCTACTAGC+AGG | - | chr8.2:8757618-8757637 | None:intergenic | 40.0% | |
| GTGGATGTGACCAAAATGAA+TGG | + | chr8.2:8758461-8758480 | MS.gene26719:intron | 40.0% | |
| TAATTGGGATTGTAGCTGCA+AGG | + | chr8.2:8760325-8760344 | MS.gene26719:CDS | 40.0% | |
| TACTGTCAAGGAAAAGGAGA+GGG | - | chr8.2:8759554-8759573 | None:intergenic | 40.0% | |
| TCCTTCACAAGTATGATCTC+TGG | - | chr8.2:8759181-8759200 | None:intergenic | 40.0% | |
| TCTTTGACGCTTGTCATCAT+TGG | - | chr8.2:8758929-8758948 | None:intergenic | 40.0% | |
| TGAAAGCTTCACCCAATTAC+AGG | + | chr8.2:8759265-8759284 | MS.gene26719:CDS | 40.0% | |
| TGCAACATTCACGACAAAAG+AGG | + | chr8.2:8759461-8759480 | MS.gene26719:CDS | 40.0% | |
| TGCACAATCTCTTTGTTCTG+GGG | + | chr8.2:8758903-8758922 | MS.gene26719:CDS | 40.0% | |
| TGCTCCATTGAAGAATGCAT+TGG | - | chr8.2:8760021-8760040 | None:intergenic | 40.0% | |
| TGGATAATTTCCTCCTTGGA+TGG | - | chr8.2:8760209-8760228 | None:intergenic | 40.0% | |
| TGGTCCAATGCATTCTTCAA+TGG | + | chr8.2:8760014-8760033 | MS.gene26719:CDS | 40.0% | |
| TTCTCCTGAAGCATACAACT+GGG | + | chr8.2:8759968-8759987 | MS.gene26719:CDS | 40.0% | |
| TTGGTCACAACCATGATATC+CGG | - | chr8.2:8758004-8758023 | None:intergenic | 40.0% | |
| TTGTCCACAGACTTCAAATG+TGG | - | chr8.2:8760282-8760301 | None:intergenic | 40.0% | |
| TTTCTCCTGAAGCATACAAC+TGG | + | chr8.2:8759967-8759986 | MS.gene26719:CDS | 40.0% | |
| ! | ATGAGCGTTTTCTTATTGCC+AGG | - | chr8.2:8757480-8757499 | None:intergenic | 40.0% |
| ! | ATGCCTCAATAACTGGTTTC+CGG | + | chr8.2:8759517-8759536 | MS.gene26719:CDS | 40.0% |
| ! | CTGTCTTTGAATGTGTTGGT+AGG | + | chr8.2:8760387-8760406 | MS.gene26719:CDS | 40.0% |
| ! | TATGCCATGGCCATTCATTT+TGG | - | chr8.2:8758023-8758042 | None:intergenic | 40.0% |
| !! | TGGACTGGTTTGTCAATATC+TGG | - | chr8.2:8760491-8760510 | None:intergenic | 40.0% |
| !!! | CAGCGAATGGTTAGTTTTCT+TGG | + | chr8.2:8757525-8757544 | MS.gene26719:CDS | 40.0% |
| !!! | TAGTTTTAGCGAATTCCGAG+AGG | + | chr8.2:8758999-8759018 | MS.gene26719:CDS | 40.0% |
| AACAATTAGCACACGACGAG+AGG | + | chr8.2:8760154-8760173 | MS.gene26719:CDS | 45.0% | |
| ACGACATAAAGCGCGAGTAT+GGG | + | chr8.2:8759304-8759323 | MS.gene26719:CDS | 45.0% | |
| ATATCTGGCAGAGCGTGAAT+TGG | - | chr8.2:8760476-8760495 | None:intergenic | 45.0% | |
| ATGACCCAGTTGTATGCTTC+AGG | - | chr8.2:8759975-8759994 | None:intergenic | 45.0% | |
| ATGCCGAAACTGAAGACAAC+TGG | + | chr8.2:8759667-8759686 | MS.gene26719:CDS | 45.0% | |
| ATGTCGTCTGCGATATCCTT+TGG | - | chr8.2:8759291-8759310 | None:intergenic | 45.0% | |
| ATTGCTAGAGAGCAACTCCA+AGG | + | chr8.2:8759366-8759385 | MS.gene26719:CDS | 45.0% | |
| CAGTGGGAAAATACCATCAC+TGG | + | chr8.2:8758958-8758977 | MS.gene26719:CDS | 45.0% | |
| CAGTTGTCATCCGGATATCA+TGG | + | chr8.2:8757991-8758010 | MS.gene26719:intron | 45.0% | |
| CCAGAACAAAGAGATTGTGC+AGG | - | chr8.2:8758904-8758923 | None:intergenic | 45.0% | |
| CCTGCACAATCTCTTTGTTC+TGG | + | chr8.2:8758901-8758920 | MS.gene26719:CDS | 45.0% | |
| CCTTGCTGACAAACTGAACA+AGG | + | chr8.2:8759827-8759846 | MS.gene26719:CDS | 45.0% | |
| CCTTGTTCAGTTTGTCAGCA+AGG | - | chr8.2:8759830-8759849 | None:intergenic | 45.0% | |
| GAAGGATCTGTTGTCAAAGC+TGG | + | chr8.2:8759195-8759214 | MS.gene26719:CDS | 45.0% | |
| GAATCTAAATTGGGCCCAGT+TGG | - | chr8.2:8758708-8758727 | None:intergenic | 45.0% | |
| GACATCGCAATTACGTAGGT+CGG | - | chr8.2:8758441-8758460 | None:intergenic | 45.0% | |
| GACGAGAGGAGTCTAATCAA+TGG | + | chr8.2:8760168-8760187 | MS.gene26719:CDS | 45.0% | |
| GCTTCAATGCGGTAAATGCA+AGG | + | chr8.2:8760619-8760638 | MS.gene26719:CDS | 45.0% | |
| GGTGACGTAAACAATAGCCA+TGG | - | chr8.2:8759809-8759828 | None:intergenic | 45.0% | |
| GTATCTAGCGACTAGAGGTT+GGG | + | chr8.2:8759218-8759237 | MS.gene26719:CDS | 45.0% | |
| GTGAATGTTGCAAAACTCCC+AGG | - | chr8.2:8759453-8759472 | None:intergenic | 45.0% | |
| GTGACCAAAATGAATGGCCA+TGG | + | chr8.2:8758016-8758035 | MS.gene26719:intron | 45.0% | |
| TCTACAACAGCAAAGGCTAC+AGG | - | chr8.2:8759648-8759667 | None:intergenic | 45.0% | |
| TGATGACAAGCGTCAAAGAG+CGG | + | chr8.2:8758930-8758949 | MS.gene26719:CDS | 45.0% | |
| TGCAAGGGATGGAAACTTAC+TGG | + | chr8.2:8760341-8760360 | MS.gene26719:CDS | 45.0% | |
| TTCACCCAATTACAGGCCAA+AGG | + | chr8.2:8759272-8759291 | MS.gene26719:CDS | 45.0% | |
| TTCGGCATCTACAACAGCAA+AGG | - | chr8.2:8759655-8759674 | None:intergenic | 45.0% | |
| TTGCCGGAAACCAGTTATTG+AGG | - | chr8.2:8759523-8759542 | None:intergenic | 45.0% | |
| ! | CAAACCAGTCCAGGTTGAAT+CGG | + | chr8.2:8760499-8760518 | MS.gene26719:CDS | 45.0% |
| ! | GAGCGTCTGATGTTTCCTTT+TGG | - | chr8.2:8760229-8760248 | None:intergenic | 45.0% |
| ! | GCGTTTTCTTATTGCCAGGA+AGG | - | chr8.2:8757476-8757495 | None:intergenic | 45.0% |
| ! | GGTACCACATTTGAAGTCTG+TGG | + | chr8.2:8760275-8760294 | MS.gene26719:CDS | 45.0% |
| !! | CAACTGGCATTGGTTTCTTC+AGG | + | chr8.2:8759683-8759702 | MS.gene26719:CDS | 45.0% |
| !! | CTACAGGTGTTGCTTTCACA+AGG | + | chr8.2:8760254-8760273 | MS.gene26719:CDS | 45.0% |
| AATGCATTGGACCAGTGCTC+TGG | - | chr8.2:8760008-8760027 | None:intergenic | 50.0% | |
| ACAGCAATAGCATGGCAGCA+AGG | - | chr8.2:8760371-8760390 | None:intergenic | 50.0% | |
| CAATAGCATGGCAGCAAGGA+AGG | - | chr8.2:8760367-8760386 | None:intergenic | 50.0% | |
| CATCCAACATGCCTGCTAGT+AGG | + | chr8.2:8757604-8757623 | MS.gene26719:CDS | 50.0% | |
| CCACGACATCGCAATTACGT+AGG | - | chr8.2:8758445-8758464 | None:intergenic | 50.0% | |
| CCATCACTGGTGTAGACCAA+AGG | + | chr8.2:8758971-8758990 | MS.gene26719:CDS | 50.0% | |
| CCTACGTAATTGCGATGTCG+TGG | + | chr8.2:8758442-8758461 | MS.gene26719:intron | 50.0% | |
| CCTTTGGTCTACACCAGTGA+TGG | - | chr8.2:8758974-8758993 | None:intergenic | 50.0% | |
| CTACCTACTAGCAGGCATGT+TGG | - | chr8.2:8757610-8757629 | None:intergenic | 50.0% | |
| GACGACATAAAGCGCGAGTA+TGG | + | chr8.2:8759303-8759322 | MS.gene26719:CDS | 50.0% | |
| GGTATCTAGCGACTAGAGGT+TGG | + | chr8.2:8759217-8759236 | MS.gene26719:CDS | 50.0% | |
| GTAAATCTCAAGGCTGTCCC+TGG | + | chr8.2:8759100-8759119 | MS.gene26719:CDS | 50.0% | |
| GTTTGCACGTCTTCCGATTG+TGG | - | chr8.2:8760652-8760671 | None:intergenic | 50.0% | |
| TAAATGAGGAAGTGGCGGCT+CGG | + | chr8.2:8757577-8757596 | MS.gene26719:CDS | 50.0% | |
| TACAAAGTGAGCCAGAGCAC+TGG | + | chr8.2:8759994-8760013 | MS.gene26719:CDS | 50.0% | |
| TCATGAGGCCAGACGTTTCA+TGG | + | chr8.2:8759869-8759888 | MS.gene26719:CDS | 50.0% | |
| TGCGGTAAATGCAAGGGACT+TGG | + | chr8.2:8760626-8760645 | MS.gene26719:CDS | 50.0% | |
| TGGTCGGCCAAAATCAAAGC+AGG | + | chr8.2:8760568-8760587 | MS.gene26719:CDS | 50.0% | |
| TTGGCTGCAACTTCTGTCGA+TGG | + | chr8.2:8759606-8759625 | MS.gene26719:CDS | 50.0% | |
| ! | AGTCCAGGTTGAATCGGCTA+TGG | + | chr8.2:8760505-8760524 | MS.gene26719:CDS | 50.0% |
| ! | ATAGCCGATTCAACCTGGAC+TGG | - | chr8.2:8760506-8760525 | None:intergenic | 50.0% |
| ! | CTTCCATAGCCGATTCAACC+TGG | - | chr8.2:8760511-8760530 | None:intergenic | 50.0% |
| ! | TGCTGCTTACGCATCCAAAC+CGG | + | chr8.2:8759908-8759927 | MS.gene26719:CDS | 50.0% |
| !! | TGCTTTGATTTTGGCCGACC+AGG | - | chr8.2:8760569-8760588 | None:intergenic | 50.0% |
| !! | TTTGATTTTGGCCGACCAGG+AGG | - | chr8.2:8760566-8760585 | None:intergenic | 50.0% |
| AAGGAAAAGGAGAGGGCGAC+AGG | - | chr8.2:8759547-8759566 | None:intergenic | 55.0% | |
| ATCAGACGCTCGCTCACTAC+AGG | + | chr8.2:8760238-8760257 | MS.gene26719:CDS | 55.0% | |
| CAACTAAGCGTCCTCCTGGT+CGG | + | chr8.2:8760552-8760571 | MS.gene26719:CDS | 55.0% | |
| CTAGCGACTAGAGGTTGGGT+GGG | + | chr8.2:8759222-8759241 | MS.gene26719:CDS | 55.0% | |
| GCAAGGGACTTGGCCACAAT+CGG | + | chr8.2:8760636-8760655 | MS.gene26719:CDS | 55.0% | |
| GCTGGGTATCTAGCGACTAG+AGG | + | chr8.2:8759213-8759232 | MS.gene26719:CDS | 55.0% | |
| GGGATTGTAGCTGCAAGGGA+TGG | + | chr8.2:8760330-8760349 | MS.gene26719:CDS | 55.0% | |
| TCAAAGAGCGGCACAGCAGT+GGG | + | chr8.2:8758942-8758961 | MS.gene26719:CDS | 55.0% | |
| TCTAGCGACTAGAGGTTGGG+TGG | + | chr8.2:8759221-8759240 | MS.gene26719:CDS | 55.0% | |
| !! | AGGACGCTTAGTTGGTGGAG+GGG | - | chr8.2:8760546-8760565 | None:intergenic | 55.0% |
| !! | GAGGACGCTTAGTTGGTGGA+GGG | - | chr8.2:8760547-8760566 | None:intergenic | 55.0% |
| CCACCAACTAAGCGTCCTCC+TGG | + | chr8.2:8760548-8760567 | MS.gene26719:CDS | 60.0% | |
| CCAGGAGGACGCTTAGTTGG+TGG | - | chr8.2:8760551-8760570 | None:intergenic | 60.0% | |
| CGACCAGGAGGACGCTTAGT+TGG | - | chr8.2:8760554-8760573 | None:intergenic | 60.0% | |
| GTCAAAGAGCGGCACAGCAG+TGG | + | chr8.2:8758941-8758960 | MS.gene26719:CDS | 60.0% | |
| !! | GGAGGACGCTTAGTTGGTGG+AGG | - | chr8.2:8760548-8760567 | None:intergenic | 60.0% |
| GGAGAGGGCGACAGGCTTGC+CGG | - | chr8.2:8759539-8759558 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 8757270 | 8760679 | 8757270 | ID=MS.gene26719 |
| chr8.2 | mRNA | 8757270 | 8760679 | 8757270 | ID=MS.gene26719.t1;Parent=MS.gene26719 |
| chr8.2 | exon | 8757270 | 8757625 | 8757270 | ID=MS.gene26719.t1.exon1;Parent=MS.gene26719.t1 |
| chr8.2 | CDS | 8757270 | 8757625 | 8757270 | ID=cds.MS.gene26719.t1;Parent=MS.gene26719.t1 |
| chr8.2 | exon | 8758783 | 8760679 | 8758783 | ID=MS.gene26719.t1.exon2;Parent=MS.gene26719.t1 |
| chr8.2 | CDS | 8758783 | 8760679 | 8758783 | ID=cds.MS.gene26719.t1;Parent=MS.gene26719.t1 |
| Gene Sequence |
| Protein sequence |
