Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26992.t1 | XP_013466138.1 | 94.7 | 209 | 11 | 0 | 18 | 226 | 170 | 378 | 3.40E-109 | 404.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26992.t1 | Q9AR07 | 55.4 | 202 | 81 | 2 | 32 | 224 | 186 | 387 | 1.8e-55 | 217.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26992.t1 | A0A072VED2 | 94.7 | 209 | 11 | 0 | 18 | 226 | 170 | 378 | 2.4e-109 | 404.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049396 | MS.gene26992 | 0.832301 | 1.02E-55 | -1.69E-46 |
| MS.gene049552 | MS.gene26992 | 0.803361 | 3.62E-49 | -1.69E-46 |
| MS.gene050502 | MS.gene26992 | 0.850694 | 1.44E-60 | -1.69E-46 |
| MS.gene051941 | MS.gene26992 | 0.801378 | 9.26E-49 | -1.69E-46 |
| MS.gene052346 | MS.gene26992 | 0.845464 | 4.00E-59 | -1.69E-46 |
| MS.gene053505 | MS.gene26992 | 0.817902 | 2.59E-52 | -1.69E-46 |
| MS.gene053574 | MS.gene26992 | 0.827829 | 1.26E-54 | -1.69E-46 |
| MS.gene053626 | MS.gene26992 | 0.807212 | 5.65E-50 | -1.69E-46 |
| MS.gene05494 | MS.gene26992 | 0.812375 | 4.38E-51 | -1.69E-46 |
| MS.gene055741 | MS.gene26992 | 0.814246 | 1.70E-51 | -1.69E-46 |
| MS.gene055744 | MS.gene26992 | 0.806664 | 7.37E-50 | -1.69E-46 |
| MS.gene055909 | MS.gene26992 | 0.844623 | 6.74E-59 | -1.69E-46 |
| MS.gene055911 | MS.gene26992 | 0.837868 | 4.03E-57 | -1.69E-46 |
| MS.gene056448 | MS.gene26992 | 0.807517 | 4.86E-50 | -1.69E-46 |
| MS.gene05666 | MS.gene26992 | 0.804016 | 2.64E-49 | -1.69E-46 |
| MS.gene057076 | MS.gene26992 | 0.800323 | 1.52E-48 | -1.69E-46 |
| MS.gene057734 | MS.gene26992 | 0.812272 | 4.61E-51 | -1.69E-46 |
| MS.gene058120 | MS.gene26992 | 0.800069 | 1.71E-48 | -1.69E-46 |
| MS.gene059368 | MS.gene26992 | 0.810553 | 1.09E-50 | -1.69E-46 |
| MS.gene060372 | MS.gene26992 | 0.80355 | 3.31E-49 | -1.69E-46 |
| MS.gene060778 | MS.gene26992 | 0.810659 | 1.03E-50 | -1.69E-46 |
| MS.gene06097 | MS.gene26992 | 0.826006 | 3.44E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26992.t1 | MTR_1g022465 | 94.737 | 209 | 11 | 0 | 18 | 226 | 170 | 378 | 2.63e-149 | 420 |
| MS.gene26992.t1 | MTR_1g022455 | 90.000 | 210 | 20 | 1 | 18 | 226 | 170 | 379 | 9.53e-138 | 391 |
| MS.gene26992.t1 | MTR_8g076900 | 45.960 | 198 | 107 | 0 | 28 | 225 | 164 | 361 | 3.91e-58 | 187 |
| MS.gene26992.t1 | MTR_5g020940 | 42.593 | 216 | 110 | 4 | 18 | 225 | 171 | 380 | 2.47e-54 | 178 |
| MS.gene26992.t1 | MTR_3g467270 | 40.777 | 206 | 114 | 2 | 28 | 225 | 163 | 368 | 1.20e-53 | 176 |
| MS.gene26992.t1 | MTR_4g018820 | 41.753 | 194 | 110 | 1 | 32 | 225 | 168 | 358 | 6.63e-53 | 174 |
| MS.gene26992.t1 | MTR_8g077040 | 41.791 | 201 | 109 | 2 | 32 | 224 | 168 | 368 | 3.10e-52 | 172 |
| MS.gene26992.t1 | MTR_6g056070 | 39.423 | 208 | 114 | 2 | 18 | 225 | 161 | 356 | 1.06e-51 | 171 |
| MS.gene26992.t1 | MTR_8g020690 | 40.000 | 210 | 114 | 4 | 18 | 225 | 160 | 359 | 1.51e-48 | 163 |
| MS.gene26992.t1 | MTR_5g046110 | 40.865 | 208 | 115 | 2 | 18 | 224 | 220 | 420 | 9.74e-46 | 157 |
| MS.gene26992.t1 | MTR_3g467560 | 44.976 | 209 | 107 | 4 | 18 | 224 | 185 | 387 | 3.57e-44 | 152 |
| MS.gene26992.t1 | MTR_8g020700 | 37.915 | 211 | 114 | 4 | 18 | 225 | 160 | 356 | 4.38e-43 | 149 |
| MS.gene26992.t1 | MTR_3g117060 | 38.498 | 213 | 122 | 2 | 18 | 225 | 160 | 368 | 8.84e-43 | 148 |
| MS.gene26992.t1 | MTR_7g084620 | 39.623 | 212 | 117 | 3 | 18 | 225 | 160 | 364 | 1.31e-42 | 147 |
| MS.gene26992.t1 | MTR_7g084350 | 39.409 | 203 | 114 | 2 | 26 | 224 | 166 | 363 | 5.76e-39 | 138 |
| MS.gene26992.t1 | MTR_7g084330 | 38.028 | 213 | 104 | 5 | 18 | 225 | 143 | 332 | 8.24e-33 | 121 |
| MS.gene26992.t1 | MTR_3g054330 | 34.234 | 222 | 118 | 7 | 18 | 223 | 173 | 382 | 3.17e-27 | 107 |
| MS.gene26992.t1 | MTR_8g076900 | 55.000 | 80 | 36 | 0 | 28 | 107 | 164 | 243 | 2.58e-23 | 94.7 |
| MS.gene26992.t1 | MTR_3g052700 | 31.937 | 191 | 112 | 5 | 18 | 199 | 180 | 361 | 6.94e-23 | 95.5 |
| MS.gene26992.t1 | MTR_5g093900 | 29.630 | 216 | 132 | 6 | 18 | 222 | 182 | 388 | 8.73e-23 | 95.5 |
| MS.gene26992.t1 | MTR_1g108660 | 29.064 | 203 | 134 | 3 | 18 | 219 | 136 | 329 | 8.54e-22 | 92.0 |
| MS.gene26992.t1 | MTR_7g084340 | 41.176 | 119 | 66 | 1 | 110 | 224 | 11 | 129 | 9.14e-22 | 87.4 |
| MS.gene26992.t1 | MTR_6g015620 | 40.833 | 120 | 66 | 1 | 111 | 225 | 18 | 137 | 5.65e-20 | 82.8 |
| MS.gene26992.t1 | MTR_8g020700 | 46.154 | 91 | 42 | 2 | 18 | 107 | 160 | 244 | 2.84e-18 | 81.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene26992.t1 | AT1G19640 | 54.950 | 202 | 82 | 2 | 32 | 224 | 186 | 387 | 2.76e-72 | 225 |
| MS.gene26992.t1 | AT5G66430 | 45.116 | 215 | 103 | 4 | 18 | 225 | 148 | 354 | 2.35e-51 | 170 |
| MS.gene26992.t1 | AT3G11480 | 44.498 | 209 | 106 | 3 | 18 | 225 | 180 | 379 | 1.69e-50 | 168 |
| MS.gene26992.t1 | AT4G36470 | 42.788 | 208 | 116 | 1 | 18 | 225 | 166 | 370 | 7.51e-50 | 167 |
| MS.gene26992.t1 | AT5G04380 | 43.868 | 212 | 108 | 4 | 18 | 225 | 114 | 318 | 1.84e-48 | 162 |
| MS.gene26992.t1 | AT5G04380 | 43.868 | 212 | 108 | 4 | 18 | 225 | 185 | 389 | 8.09e-48 | 162 |
| MS.gene26992.t1 | AT5G04370 | 43.128 | 211 | 110 | 4 | 18 | 226 | 189 | 391 | 3.06e-46 | 158 |
| MS.gene26992.t1 | AT5G04370 | 43.128 | 211 | 110 | 4 | 18 | 226 | 208 | 410 | 4.10e-46 | 158 |
| MS.gene26992.t1 | AT5G04370 | 43.128 | 211 | 110 | 4 | 18 | 226 | 194 | 396 | 5.65e-46 | 157 |
| MS.gene26992.t1 | AT5G04380 | 42.453 | 212 | 104 | 5 | 18 | 225 | 181 | 378 | 1.71e-43 | 150 |
| MS.gene26992.t1 | AT5G38020 | 37.387 | 222 | 117 | 5 | 18 | 225 | 116 | 329 | 4.64e-41 | 142 |
| MS.gene26992.t1 | AT5G38020 | 37.387 | 222 | 117 | 5 | 18 | 225 | 155 | 368 | 7.75e-41 | 143 |
| MS.gene26992.t1 | AT3G21950 | 33.484 | 221 | 127 | 4 | 18 | 225 | 155 | 368 | 1.31e-32 | 121 |
| MS.gene26992.t1 | AT2G14060 | 35.945 | 217 | 123 | 4 | 18 | 225 | 163 | 372 | 1.02e-30 | 116 |
| MS.gene26992.t1 | AT3G21950 | 29.249 | 253 | 127 | 5 | 18 | 225 | 155 | 400 | 1.27e-26 | 106 |
| MS.gene26992.t1 | AT5G38100 | 33.679 | 193 | 114 | 5 | 18 | 207 | 135 | 316 | 3.84e-23 | 95.9 |
| MS.gene26992.t1 | AT5G55250 | 29.224 | 219 | 129 | 7 | 18 | 222 | 139 | 345 | 7.40e-23 | 95.1 |
| MS.gene26992.t1 | AT1G15125 | 32.065 | 184 | 115 | 3 | 20 | 201 | 146 | 321 | 7.74e-23 | 95.1 |
| MS.gene26992.t1 | AT5G55250 | 29.224 | 219 | 129 | 7 | 18 | 222 | 177 | 383 | 7.91e-23 | 95.5 |
| MS.gene26992.t1 | AT5G38100 | 32.642 | 193 | 116 | 4 | 18 | 207 | 158 | 339 | 9.19e-23 | 95.1 |
| MS.gene26992.t1 | AT1G68040 | 34.574 | 188 | 116 | 4 | 19 | 204 | 158 | 340 | 1.31e-22 | 94.7 |
| MS.gene26992.t1 | AT5G37990 | 29.245 | 212 | 134 | 5 | 19 | 225 | 162 | 362 | 1.33e-21 | 92.0 |
| MS.gene26992.t1 | AT5G37970 | 30.047 | 213 | 131 | 6 | 19 | 225 | 162 | 362 | 1.78e-21 | 91.7 |
| MS.gene26992.t1 | AT5G38780 | 30.588 | 170 | 95 | 4 | 46 | 207 | 138 | 292 | 3.84e-17 | 79.0 |
| MS.gene26992.t1 | AT5G38780 | 30.588 | 170 | 95 | 4 | 46 | 207 | 187 | 341 | 4.97e-17 | 79.0 |
| MS.gene26992.t1 | AT4G26420 | 30.052 | 193 | 124 | 5 | 18 | 201 | 161 | 351 | 2.25e-15 | 74.3 |
| MS.gene26992.t1 | AT5G56300 | 25.907 | 193 | 134 | 3 | 20 | 204 | 173 | 364 | 1.02e-12 | 67.0 |
| MS.gene26992.t1 | AT2G14060 | 41.772 | 79 | 40 | 1 | 18 | 96 | 163 | 235 | 1.08e-11 | 63.2 |
| MS.gene26992.t1 | AT3G44840 | 26.708 | 161 | 95 | 3 | 46 | 198 | 174 | 319 | 4.16e-11 | 62.0 |
Find 57 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTATGCTAGAATATCATTT+TGG | 0.176790 | 1.3:+2435107 | MS.gene26992:CDS |
| AATGACCAAATTGATGTATT+TGG | 0.221869 | 1.3:-2435201 | None:intergenic |
| CCTTATGACCATGGTTTCTA+TGG | 0.261315 | 1.3:+2434330 | MS.gene26992:CDS |
| AAGATGGGAATTGCTGATTT+AGG | 0.303966 | 1.3:+2431737 | MS.gene26992:CDS |
| GAAATTACCCTTAGGGCATT+AGG | 0.321258 | 1.3:-2431773 | None:intergenic |
| AGATTCAACCACAGCCCTTA+TGG | 0.342594 | 1.3:-2435087 | None:intergenic |
| TATGCAGGCCCCTGGTGGTT+TGG | 0.343156 | 1.3:+2434072 | MS.gene26992:intron |
| CAAATGATCCTCCACAAGTT+TGG | 0.347302 | 1.3:-2435165 | None:intergenic |
| ATGAAGCTTATGAAATTGAT+TGG | 0.352222 | 1.3:+2435003 | MS.gene26992:CDS |
| AATCAATTTCATAAGCTTCA+TGG | 0.357614 | 1.3:-2435001 | None:intergenic |
| CACCCAACTGTTGCTATCAA+TGG | 0.383419 | 1.3:+2434290 | MS.gene26992:CDS |
| TAGGACCAAATACATCAATT+TGG | 0.396975 | 1.3:+2435196 | MS.gene26992:CDS |
| GCTGATTTAGGTTGTTCATC+AGG | 0.406185 | 1.3:+2431749 | MS.gene26992:CDS |
| CCATAGAAACCATGGTCATA+AGG | 0.419755 | 1.3:-2434330 | None:intergenic |
| TGAGTCACGTTCTCAAGAAA+TGG | 0.425270 | 1.3:+2434210 | MS.gene26992:CDS |
| TATGAAATTGATTGGGATGA+TGG | 0.438195 | 1.3:+2435011 | MS.gene26992:CDS |
| AACGAGTTGCAAAGACCATA+AGG | 0.441481 | 1.3:+2435072 | MS.gene26992:CDS |
| TTGGAGGATGAAAGAGGAAA+AGG | 0.445045 | 1.3:+2434091 | MS.gene26992:CDS |
| TATTTCTGAAATTACCCTTA+GGG | 0.453496 | 1.3:-2431780 | None:intergenic |
| ATCAATTTCATAAGCTTCAT+GGG | 0.453860 | 1.3:-2435000 | None:intergenic |
| TGATTCTATATGCAGGCCCC+TGG | 0.466597 | 1.3:+2434064 | MS.gene26992:intron |
| AGTGATGATAAGATGATAAG+TGG | 0.467732 | 1.3:+2435047 | MS.gene26992:CDS |
| ACCCAACTGTTGCTATCAAT+GGG | 0.467790 | 1.3:+2434291 | MS.gene26992:CDS |
| TCAAAACACGGTGCATAGTA+AGG | 0.468345 | 1.3:-2434930 | None:intergenic |
| ACGATGGCCAATAATGAAGA+TGG | 0.469521 | 1.3:+2431721 | None:intergenic |
| AGCAACAGTTGGGTGACGTT+GGG | 0.481995 | 1.3:-2434282 | None:intergenic |
| TGGAGGATGAAAGAGGAAAA+GGG | 0.488214 | 1.3:+2434092 | MS.gene26992:CDS |
| CTTTCATCCTCCAAACCACC+AGG | 0.489278 | 1.3:-2434082 | None:intergenic |
| GCAGGCCCCTGGTGGTTTGG+AGG | 0.513877 | 1.3:+2434075 | MS.gene26992:intron |
| TCCCATTGATAGCAACAGTT+GGG | 0.515861 | 1.3:-2434292 | None:intergenic |
| GGGTCTAGTTGAAGAAGAAA+AGG | 0.515871 | 1.3:+2434890 | MS.gene26992:intron |
| CATAGAAACCATGGTCATAA+GGG | 0.519203 | 1.3:-2434329 | None:intergenic |
| TGAAGCTTATGAAATTGATT+GGG | 0.520122 | 1.3:+2435004 | MS.gene26992:CDS |
| ATGAAATTGATTGGGATGAT+GGG | 0.521002 | 1.3:+2435012 | MS.gene26992:CDS |
| TAATGGATGAGTTGTTTCAA+AGG | 0.525941 | 1.3:+2435138 | MS.gene26992:CDS |
| TTCTATATGCAGGCCCCTGG+TGG | 0.528673 | 1.3:+2434067 | MS.gene26992:intron |
| CATCAGGACCTAATGCCCTA+AGG | 0.529141 | 1.3:+2431765 | MS.gene26992:CDS |
| TCAAAGGTTTGCCAAACTTG+TGG | 0.533407 | 1.3:+2435154 | MS.gene26992:CDS |
| TTCCCATTGATAGCAACAGT+TGG | 0.543485 | 1.3:-2434293 | None:intergenic |
| CGTTCTCAAGAAATGGTGCA+TGG | 0.550195 | 1.3:+2434217 | MS.gene26992:CDS |
| ATTCCCTGCCCATAAAAGAA+AGG | 0.561138 | 1.3:-2434252 | None:intergenic |
| GTTCTCAAGAAATGGTGCAT+GGG | 0.561345 | 1.3:+2434218 | MS.gene26992:CDS |
| CGATGGCCAATAATGAAGAT+GGG | 0.562710 | 1.3:+2431722 | None:intergenic |
| AAGGTTTGCCAAACTTGTGG+AGG | 0.571113 | 1.3:+2435157 | MS.gene26992:CDS |
| TTCTCAAGAAATGGTGCATG+GGG | 0.571897 | 1.3:+2434219 | MS.gene26992:CDS |
| TGCAAAGACCATAAGGGCTG+TGG | 0.574140 | 1.3:+2435079 | MS.gene26992:CDS |
| ATCAGGACCTAATGCCCTAA+GGG | 0.574940 | 1.3:+2431766 | MS.gene26992:CDS |
| ACGAGTTGCAAAGACCATAA+GGG | 0.576120 | 1.3:+2435073 | MS.gene26992:CDS |
| AGAGGAAAAGGGTTGAACAA+AGG | 0.586631 | 1.3:+2434103 | MS.gene26992:CDS |
| AGCACAGTCCCTTATGACCA+TGG | 0.588105 | 1.3:+2434321 | MS.gene26992:CDS |
| TTCATCCTCCAAACCACCAG+GGG | 0.588760 | 1.3:-2434080 | None:intergenic |
| TAGCAACAGTTGGGTGACGT+TGG | 0.590620 | 1.3:-2434283 | None:intergenic |
| GGTGGTTTGGAGGATGAAAG+AGG | 0.602136 | 1.3:+2434085 | MS.gene26992:CDS |
| TTTCATCCTCCAAACCACCA+GGG | 0.628257 | 1.3:-2434081 | None:intergenic |
| TCTAGTTGAAGAAGAAAAGG+TGG | 0.646901 | 1.3:+2434893 | MS.gene26992:CDS |
| GTAACGTACCATAGAAACCA+TGG | 0.673939 | 1.3:-2434338 | None:intergenic |
| TCTCAAGAAATGGTGCATGG+GGG | 0.747092 | 1.3:+2434220 | MS.gene26992:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAATTTATTTATTTGCTTT+CGG | + | chr1.3:2434861-2434880 | MS.gene26992:intron | 10.0% |
| !!! | ATTTTTTTTCTTTCAAATAA+TGG | + | chr1.3:2433285-2433304 | MS.gene26992:intron | 10.0% |
| !!! | TTTTTTTTTTTGAAAGAAAA+TGG | + | chr1.3:2433878-2433897 | MS.gene26992:intron | 10.0% |
| !! | AACGAAAATTGATATTATAA+GGG | - | chr1.3:2433252-2433271 | None:intergenic | 15.0% |
| !! | AAGTCAAATCATATAATATT+AGG | + | chr1.3:2433034-2433053 | MS.gene26992:intron | 15.0% |
| !! | AATACAATAGTTTAAATGAA+AGG | - | chr1.3:2432961-2432980 | None:intergenic | 15.0% |
| !! | ACTACTATACTATAAAAAAT+AGG | + | chr1.3:2433209-2433228 | MS.gene26992:intron | 15.0% |
| !! | ATACAATAGTTTAAATGAAA+GGG | - | chr1.3:2432960-2432979 | None:intergenic | 15.0% |
| !! | TATAAAAGGAAATAATTCTT+TGG | - | chr1.3:2432881-2432900 | None:intergenic | 15.0% |
| !! | TCATTAAAGATAAAATACTT+TGG | + | chr1.3:2432260-2432279 | MS.gene26992:intron | 15.0% |
| !! | TTTATAAAAATACATAGCTT+TGG | + | chr1.3:2432716-2432735 | MS.gene26992:intron | 15.0% |
| !!! | AAGTTTAGAATTATTTAACA+AGG | + | chr1.3:2433431-2433450 | MS.gene26992:intron | 15.0% |
| !!! | AGTTTAGAATTATTTAACAA+GGG | + | chr1.3:2433432-2433451 | MS.gene26992:intron | 15.0% |
| !!! | ATTATGAGTTTAAAATAAAC+CGG | - | chr1.3:2434834-2434853 | None:intergenic | 15.0% |
| !!! | ATTTTTAATTCTTCAAAACA+CGG | - | chr1.3:2434945-2434964 | None:intergenic | 15.0% |
| !!! | CATATTTTTTAATGAGTTTT+TGG | - | chr1.3:2433560-2433579 | None:intergenic | 15.0% |
| !!! | TATTTTTTATAGTATAGTAG+TGG | - | chr1.3:2433210-2433229 | None:intergenic | 15.0% |
| !!! | TTTGTTTTGTTGTATTTTTT+TGG | - | chr1.3:2433724-2433743 | None:intergenic | 15.0% |
| !! | AAATGTTGTTCATATTGTAA+TGG | - | chr1.3:2433067-2433086 | None:intergenic | 20.0% |
| !! | AAGAACAAAGTATATGAATT+AGG | - | chr1.3:2432110-2432129 | None:intergenic | 20.0% |
| !! | AATGTTGTTCATATTGTAAT+GGG | - | chr1.3:2433066-2433085 | None:intergenic | 20.0% |
| !! | ACTATTTATGCTACAAATAA+TGG | + | chr1.3:2433832-2433851 | MS.gene26992:intron | 20.0% |
| !! | ATATATAACATTAGTTCCTT+TGG | - | chr1.3:2431851-2431870 | None:intergenic | 20.0% |
| !! | CAATCTTGTGATAAATAAAT+TGG | - | chr1.3:2432514-2432533 | None:intergenic | 20.0% |
| !! | CATCTTTCTACAAAAAAATA+GGG | + | chr1.3:2431918-2431937 | MS.gene26992:intron | 20.0% |
| !! | CTTGGTTAAAGAATTATAAA+AGG | - | chr1.3:2432895-2432914 | None:intergenic | 20.0% |
| !! | GAAATAAAGGAAATGTTAAT+CGG | - | chr1.3:2432930-2432949 | None:intergenic | 20.0% |
| !! | GAACGAAAATTGATATTATA+AGG | - | chr1.3:2433253-2433272 | None:intergenic | 20.0% |
| !! | GTACTAAAAATCATCAATAT+TGG | + | chr1.3:2434396-2434415 | MS.gene26992:intron | 20.0% |
| !! | TCAAATTTCTTCCAAAAAAT+TGG | - | chr1.3:2432633-2432652 | None:intergenic | 20.0% |
| !! | TCATCTTTCTACAAAAAAAT+AGG | + | chr1.3:2431917-2431936 | MS.gene26992:intron | 20.0% |
| !! | TTAATTGATGTAAACTCATA+TGG | - | chr1.3:2433792-2433811 | None:intergenic | 20.0% |
| !!! | AAATGACACTTATTTTGAAA+CGG | + | chr1.3:2432387-2432406 | MS.gene26992:intron | 20.0% |
| !!! | AATAATGGAAGACAAATTAA+TGG | + | chr1.3:2433847-2433866 | MS.gene26992:intron | 20.0% |
| !!! | AATTGATCTTATTTGCAAAA+AGG | + | chr1.3:2433107-2433126 | MS.gene26992:intron | 20.0% |
| !!! | AGCATTTTCCAAAATAAAAA+TGG | - | chr1.3:2432421-2432440 | None:intergenic | 20.0% |
| !!! | ATTTTTTAATGAGTTTTTGG+TGG | - | chr1.3:2433557-2433576 | None:intergenic | 20.0% |
| !!! | CTTTTATAATTCTTTAACCA+AGG | + | chr1.3:2432893-2432912 | MS.gene26992:intron | 20.0% |
| !!! | GTGTTTTGAAGAATTAAAAA+TGG | + | chr1.3:2434944-2434963 | MS.gene26992:CDS | 20.0% |
| !!! | TATAAGGACTTTTTTTTTAG+AGG | - | chr1.3:2433993-2434012 | None:intergenic | 20.0% |
| !!! | TCACTTTATTTTCTTTTTGA+AGG | + | chr1.3:2434793-2434812 | MS.gene26992:intron | 20.0% |
| !!! | TTTTATCTTCTCCAATTTTT+TGG | + | chr1.3:2432619-2432638 | MS.gene26992:intron | 20.0% |
| !!! | TTTTTAGAGGATAATATGTA+AGG | - | chr1.3:2433980-2433999 | None:intergenic | 20.0% |
| ! | AAAAAAATAGGGCAAGAAAA+GGG | + | chr1.3:2431929-2431948 | MS.gene26992:intron | 25.0% |
| ! | AAAAATGTTGTTGAAGTCAT+TGG | - | chr1.3:2431888-2431907 | None:intergenic | 25.0% |
| ! | AAAATGGAGATTGAAAAAGA+AGG | + | chr1.3:2434960-2434979 | MS.gene26992:CDS | 25.0% |
| ! | AAATGGAGATTGAAAAAGAA+GGG | + | chr1.3:2434961-2434980 | MS.gene26992:CDS | 25.0% |
| ! | AAATGTTGACCAAAAACATT+TGG | - | chr1.3:2433315-2433334 | None:intergenic | 25.0% |
| ! | AAATTATCCTAATCGACTAT+TGG | + | chr1.3:2432229-2432248 | MS.gene26992:intron | 25.0% |
| ! | AAGTCCTTATATGTTGAAAA+TGG | + | chr1.3:2434002-2434021 | MS.gene26992:intron | 25.0% |
| ! | AATAGTCGATTAGGATAATT+TGG | - | chr1.3:2432230-2432249 | None:intergenic | 25.0% |
| ! | AATCAATTTCATAAGCTTCA+TGG | - | chr1.3:2435004-2435023 | None:intergenic | 25.0% |
| ! | AATGACCAAATTGATGTATT+TGG | - | chr1.3:2435204-2435223 | None:intergenic | 25.0% |
| ! | ATAGAATAGATCCAAAGTTA+AGG | + | chr1.3:2434589-2434608 | MS.gene26992:intron | 25.0% |
| ! | ATCAATTTCATAAGCTTCAT+GGG | - | chr1.3:2435003-2435022 | None:intergenic | 25.0% |
| ! | ATGAAGCTTATGAAATTGAT+TGG | + | chr1.3:2435003-2435022 | MS.gene26992:CDS | 25.0% |
| ! | ATTGGAGAAGATAAAATAAG+AGG | - | chr1.3:2432615-2432634 | None:intergenic | 25.0% |
| ! | ATTTATCCACCTTATATTGA+CGG | - | chr1.3:2433764-2433783 | None:intergenic | 25.0% |
| ! | CAAAGATAGAAATTATGTGT+TGG | + | chr1.3:2432480-2432499 | MS.gene26992:intron | 25.0% |
| ! | CAACACATAATTTCTATCTT+TGG | - | chr1.3:2432482-2432501 | None:intergenic | 25.0% |
| ! | GAAAATCTTATTAGATGTTG+TGG | - | chr1.3:2434738-2434757 | None:intergenic | 25.0% |
| ! | GATAATCATCATAATCACAA+TGG | + | chr1.3:2431956-2431975 | MS.gene26992:intron | 25.0% |
| ! | TAGAATAGATCCAAAGTTAA+GGG | + | chr1.3:2434590-2434609 | MS.gene26992:intron | 25.0% |
| ! | TGAAGCTTATGAAATTGATT+GGG | + | chr1.3:2435004-2435023 | MS.gene26992:CDS | 25.0% |
| ! | TTAAAATGAACATAGGTGAA+TGG | - | chr1.3:2434647-2434666 | None:intergenic | 25.0% |
| ! | TTGATGAGTAAGTAAGAATT+TGG | + | chr1.3:2433935-2433954 | MS.gene26992:intron | 25.0% |
| ! | TTGGAGAAGATAAAATAAGA+GGG | - | chr1.3:2432614-2432633 | None:intergenic | 25.0% |
| !! | AAAGGGCATAATTGAAATAA+AGG | - | chr1.3:2432943-2432962 | None:intergenic | 25.0% |
| !! | ATAGTATAGTAGTGGAAATA+TGG | - | chr1.3:2433202-2433221 | None:intergenic | 25.0% |
| !! | CTATGCTAGAATATCATTTT+GGG | + | chr1.3:2435108-2435127 | MS.gene26992:CDS | 25.0% |
| !! | GAAACTGTAAAAAGTCATTT+TGG | - | chr1.3:2434189-2434208 | None:intergenic | 25.0% |
| !! | GAATCCATTTTCAACATATA+AGG | - | chr1.3:2434009-2434028 | None:intergenic | 25.0% |
| !! | TAGTATAGTAGTGGAAATAT+GGG | - | chr1.3:2433201-2433220 | None:intergenic | 25.0% |
| !! | TCTATGCTAGAATATCATTT+TGG | + | chr1.3:2435107-2435126 | MS.gene26992:CDS | 25.0% |
| !!! | CTAATTTTGATTCTATATGC+AGG | + | chr1.3:2434057-2434076 | MS.gene26992:intron | 25.0% |
| !!! | GCGTAATACTTTTATTTCAA+GGG | + | chr1.3:2432738-2432757 | MS.gene26992:intron | 25.0% |
| !!! | TATTTCTGAAATTACCCTTA+GGG | - | chr1.3:2431783-2431802 | None:intergenic | 25.0% |
| AAACAAACCAATAGTCGATT+AGG | - | chr1.3:2432239-2432258 | None:intergenic | 30.0% | |
| AACTTTAACATGTGTCCTAA+AGG | + | chr1.3:2432573-2432592 | MS.gene26992:intron | 30.0% | |
| AGGATCATTTGTCAAAAACT+AGG | + | chr1.3:2435177-2435196 | MS.gene26992:CDS | 30.0% | |
| AGTCCAATCAAAAAATGGAA+AGG | - | chr1.3:2434695-2434714 | None:intergenic | 30.0% | |
| AGTGATGATAAGATGATAAG+TGG | + | chr1.3:2435047-2435066 | MS.gene26992:CDS | 30.0% | |
| ATCTAGCAATCAGTGTTAAA+TGG | - | chr1.3:2432662-2432681 | None:intergenic | 30.0% | |
| ATGAAATTGATTGGGATGAT+GGG | + | chr1.3:2435012-2435031 | MS.gene26992:CDS | 30.0% | |
| CAAAAAAATAGGGCAAGAAA+AGG | + | chr1.3:2431928-2431947 | MS.gene26992:intron | 30.0% | |
| CGAAATTCGATATATTTGCA+AGG | + | chr1.3:2433680-2433699 | MS.gene26992:intron | 30.0% | |
| CTACATTATCCGTCAATATA+AGG | + | chr1.3:2433752-2433771 | MS.gene26992:intron | 30.0% | |
| CTTACTCATCAAGAAAATGT+TGG | - | chr1.3:2433927-2433946 | None:intergenic | 30.0% | |
| TAATTCTTTAACCAAGGTCT+CGG | + | chr1.3:2432899-2432918 | MS.gene26992:intron | 30.0% | |
| TAGGACCAAATACATCAATT+TGG | + | chr1.3:2435196-2435215 | MS.gene26992:CDS | 30.0% | |
| TATGAAATTGATTGGGATGA+TGG | + | chr1.3:2435011-2435030 | MS.gene26992:CDS | 30.0% | |
| TTATTTGCTTTCGGTACATA+GGG | + | chr1.3:2434870-2434889 | MS.gene26992:intron | 30.0% | |
| TTTATTTGCTTTCGGTACAT+AGG | + | chr1.3:2434869-2434888 | MS.gene26992:intron | 30.0% | |
| ! | AATGGTTCTCCAAATGTTTT+TGG | + | chr1.3:2433303-2433322 | MS.gene26992:intron | 30.0% |
| ! | ATAAGCTTTTAGCACACAAT+TGG | - | chr1.3:2434155-2434174 | None:intergenic | 30.0% |
| ! | ATGAGTTTAAAATAAACCGG+AGG | - | chr1.3:2434831-2434850 | None:intergenic | 30.0% |
| ! | TAAGCTTTTAGCACACAATT+GGG | - | chr1.3:2434154-2434173 | None:intergenic | 30.0% |
| ! | TAATGGATGAGTTGTTTCAA+AGG | + | chr1.3:2435138-2435157 | MS.gene26992:CDS | 30.0% |
| ! | TGGTGGTTTAAAATGAACAT+AGG | - | chr1.3:2434654-2434673 | None:intergenic | 30.0% |
| ! | TGTTGTGGTCTAAAATAAAC+CGG | - | chr1.3:2434723-2434742 | None:intergenic | 30.0% |
| !! | CTATTTCTGAAATTACCCTT+AGG | - | chr1.3:2431784-2431803 | None:intergenic | 30.0% |
| !! | GGCGTAATACTTTTATTTCA+AGG | + | chr1.3:2432737-2432756 | MS.gene26992:intron | 30.0% |
| !! | TCATTTTGGGAGTCATATAA+TGG | + | chr1.3:2435121-2435140 | MS.gene26992:CDS | 30.0% |
| !!! | TTTAATGAGTTTTTGGTGGT+AGG | - | chr1.3:2433553-2433572 | None:intergenic | 30.0% |
| AAAAATGGAAAGGCCAAAGA+TGG | - | chr1.3:2434685-2434704 | None:intergenic | 35.0% | |
| AAAATGGAAAGGCCAAAGAT+GGG | - | chr1.3:2434684-2434703 | None:intergenic | 35.0% | |
| AAATGAACATAGGTGAATGG+TGG | - | chr1.3:2434644-2434663 | None:intergenic | 35.0% | |
| AATTAACCTGAGAAAGCCAA+TGG | - | chr1.3:2432075-2432094 | None:intergenic | 35.0% | |
| AATTAGAACCCTTAGATACG+TGG | - | chr1.3:2434371-2434390 | None:intergenic | 35.0% | |
| AATTCTTTAACCAAGGTCTC+GGG | + | chr1.3:2432900-2432919 | MS.gene26992:intron | 35.0% | |
| AGGTGAGTCCAATCAAAAAA+TGG | - | chr1.3:2434700-2434719 | None:intergenic | 35.0% | |
| ATTAGAACCCTTAGATACGT+GGG | - | chr1.3:2434370-2434389 | None:intergenic | 35.0% | |
| CATAGAAACCATGGTCATAA+GGG | - | chr1.3:2434332-2434351 | None:intergenic | 35.0% | |
| CATGATTGAGGTTGCATTTA+TGG | - | chr1.3:2431813-2431832 | None:intergenic | 35.0% | |
| CATTATCCGTCAATATAAGG+TGG | + | chr1.3:2433755-2433774 | MS.gene26992:intron | 35.0% | |
| TCTAGTTGAAGAAGAAAAGG+TGG | + | chr1.3:2434893-2434912 | MS.gene26992:CDS | 35.0% | |
| TGAAAAAGAAGGGTCATTCA+TGG | + | chr1.3:2434971-2434990 | MS.gene26992:CDS | 35.0% | |
| TGTTGAAGTCATTGGTGAAA+AGG | - | chr1.3:2431880-2431899 | None:intergenic | 35.0% | |
| ! | ACGAATGGTCCTTTCTTTTA+TGG | + | chr1.3:2434243-2434262 | MS.gene26992:CDS | 35.0% |
| ! | CGAATGGTCCTTTCTTTTAT+GGG | + | chr1.3:2434244-2434263 | MS.gene26992:CDS | 35.0% |
| !! | AAGATGGGAATTGCTGATTT+AGG | + | chr1.3:2431737-2431756 | MS.gene26992:CDS | 35.0% |
| !! | ATTTCAAGGGTCTTGTTAAC+CGG | + | chr1.3:2432751-2432770 | MS.gene26992:intron | 35.0% |
| !!! | AGGGAGTGCCATTTTTATTT+TGG | + | chr1.3:2432410-2432429 | MS.gene26992:intron | 35.0% |
| !!! | GACACTTATTTTGAAACGGA+GGG | + | chr1.3:2432391-2432410 | MS.gene26992:intron | 35.0% |
| !!! | TGACACTTATTTTGAAACGG+AGG | + | chr1.3:2432390-2432409 | MS.gene26992:intron | 35.0% |
| !!! | TGGCCTTTCCATTTTTTGAT+TGG | + | chr1.3:2434689-2434708 | MS.gene26992:intron | 35.0% |
| AAATGCTAACATGTGCCCTA+AGG | + | chr1.3:2432434-2432453 | MS.gene26992:intron | 40.0% | |
| AACGAGTTGCAAAGACCATA+AGG | + | chr1.3:2435072-2435091 | MS.gene26992:CDS | 40.0% | |
| AAGGATGATGATATCACCTC+CGG | + | chr1.3:2434812-2434831 | MS.gene26992:intron | 40.0% | |
| AATGCTAACATGTGCCCTAA+GGG | + | chr1.3:2432435-2432454 | MS.gene26992:intron | 40.0% | |
| ACAAAGTGAAGGGACTTAGT+TGG | - | chr1.3:2432034-2432053 | None:intergenic | 40.0% | |
| ACCCAACTGTTGCTATCAAT+GGG | + | chr1.3:2434291-2434310 | MS.gene26992:CDS | 40.0% | |
| ACCTATTTCCCACGTATCTA+AGG | + | chr1.3:2434359-2434378 | MS.gene26992:intron | 40.0% | |
| ACGAGTTGCAAAGACCATAA+GGG | + | chr1.3:2435073-2435092 | MS.gene26992:CDS | 40.0% | |
| AGAGGAAAAGGGTTGAACAA+AGG | + | chr1.3:2434103-2434122 | MS.gene26992:CDS | 40.0% | |
| ATTCCCTGCCCATAAAAGAA+AGG | - | chr1.3:2434255-2434274 | None:intergenic | 40.0% | |
| ATTCTTTAACCAAGGTCTCG+GGG | + | chr1.3:2432901-2432920 | MS.gene26992:intron | 40.0% | |
| CAAAGATGGGTATACTTTGG+TGG | - | chr1.3:2434671-2434690 | None:intergenic | 40.0% | |
| CAAAGTGAAGGGACTTAGTT+GGG | - | chr1.3:2432033-2432052 | None:intergenic | 40.0% | |
| CAAATGATCCTCCACAAGTT+TGG | - | chr1.3:2435168-2435187 | None:intergenic | 40.0% | |
| CACCAAAGTATACCCATCTT+TGG | + | chr1.3:2434669-2434688 | MS.gene26992:intron | 40.0% | |
| CCATAGAAACCATGGTCATA+AGG | - | chr1.3:2434333-2434352 | None:intergenic | 40.0% | |
| CCTATTTCCCACGTATCTAA+GGG | + | chr1.3:2434360-2434379 | MS.gene26992:intron | 40.0% | |
| CCTTATGACCATGGTTTCTA+TGG | + | chr1.3:2434330-2434349 | MS.gene26992:CDS | 40.0% | |
| GGGTCTAGTTGAAGAAGAAA+AGG | + | chr1.3:2434890-2434909 | MS.gene26992:intron | 40.0% | |
| GTAACGTACCATAGAAACCA+TGG | - | chr1.3:2434341-2434360 | None:intergenic | 40.0% | |
| GTTCTCAAGAAATGGTGCAT+GGG | + | chr1.3:2434218-2434237 | MS.gene26992:CDS | 40.0% | |
| TCAAAACACGGTGCATAGTA+AGG | - | chr1.3:2434933-2434952 | None:intergenic | 40.0% | |
| TCAAAGGTTTGCCAAACTTG+TGG | + | chr1.3:2435154-2435173 | MS.gene26992:CDS | 40.0% | |
| TCATGCTAACATGTGCCTTT+AGG | - | chr1.3:2432591-2432610 | None:intergenic | 40.0% | |
| TGAGTCACGTTCTCAAGAAA+TGG | + | chr1.3:2434210-2434229 | MS.gene26992:CDS | 40.0% | |
| TGGAGGATGAAAGAGGAAAA+GGG | + | chr1.3:2434092-2434111 | MS.gene26992:CDS | 40.0% | |
| TTCTCAAGAAATGGTGCATG+GGG | + | chr1.3:2434219-2434238 | MS.gene26992:CDS | 40.0% | |
| TTGGAGGATGAAAGAGGAAA+AGG | + | chr1.3:2434091-2434110 | MS.gene26992:CDS | 40.0% | |
| ! | AACATTAGTTCCTTTGGTGC+TGG | - | chr1.3:2431845-2431864 | None:intergenic | 40.0% |
| ! | AAGAAGAGTGCACAAAGTGA+AGG | - | chr1.3:2432045-2432064 | None:intergenic | 40.0% |
| ! | AGAAGAGTGCACAAAGTGAA+GGG | - | chr1.3:2432044-2432063 | None:intergenic | 40.0% |
| ! | GAAATTACCCTTAGGGCATT+AGG | - | chr1.3:2431776-2431795 | None:intergenic | 40.0% |
| ! | TCCCATTGATAGCAACAGTT+GGG | - | chr1.3:2434295-2434314 | None:intergenic | 40.0% |
| ! | TGGTCGATTCAACATGATTG+AGG | - | chr1.3:2431825-2431844 | None:intergenic | 40.0% |
| ! | TGTGGTCTAAAATAAACCGG+AGG | - | chr1.3:2434720-2434739 | None:intergenic | 40.0% |
| ! | TTCCCATTGATAGCAACAGT+TGG | - | chr1.3:2434296-2434315 | None:intergenic | 40.0% |
| ! | TTTTATGGGCAGGGAATCAA+TGG | + | chr1.3:2434258-2434277 | MS.gene26992:CDS | 40.0% |
| !! | AGTCTACCATAAAAAGTGCC+TGG | - | chr1.3:2432007-2432026 | None:intergenic | 40.0% |
| !! | ATAAAAAGTGCCTGGTACAG+CGG | - | chr1.3:2431999-2432018 | None:intergenic | 40.0% |
| !! | GCTGATTTAGGTTGTTCATC+AGG | + | chr1.3:2431749-2431768 | MS.gene26992:CDS | 40.0% |
| !! | TTTTTGATTGGACTCACCTC+CGG | + | chr1.3:2434701-2434720 | MS.gene26992:intron | 40.0% |
| AAGGTTTGCCAAACTTGTGG+AGG | + | chr1.3:2435157-2435176 | MS.gene26992:CDS | 45.0% | |
| AATTTGCCACGTGTCGAAGA+TGG | - | chr1.3:2434035-2434054 | None:intergenic | 45.0% | |
| ACTCTTCTTCTAGCCTCCAT+TGG | + | chr1.3:2432056-2432075 | MS.gene26992:intron | 45.0% | |
| AGATTCAACCACAGCCCTTA+TGG | - | chr1.3:2435090-2435109 | None:intergenic | 45.0% | |
| AGTTTCTTAACCAGTACCCC+AGG | - | chr1.3:2432781-2432800 | None:intergenic | 45.0% | |
| ATCAGGACCTAATGCCCTAA+GGG | + | chr1.3:2431766-2431785 | MS.gene26992:CDS | 45.0% | |
| ATTTGCCACGTGTCGAAGAT+GGG | - | chr1.3:2434034-2434053 | None:intergenic | 45.0% | |
| CACCCAACTGTTGCTATCAA+TGG | + | chr1.3:2434290-2434309 | MS.gene26992:CDS | 45.0% | |
| CCCTTAGATACGTGGGAAAT+AGG | - | chr1.3:2434363-2434382 | None:intergenic | 45.0% | |
| CGTTCTCAAGAAATGGTGCA+TGG | + | chr1.3:2434217-2434236 | MS.gene26992:CDS | 45.0% | |
| GACACAAATGGAACCACTCA+TGG | - | chr1.3:2434616-2434635 | None:intergenic | 45.0% | |
| GGCCAAAGATGGGTATACTT+TGG | - | chr1.3:2434674-2434693 | None:intergenic | 45.0% | |
| GTTTCTTAACCAGTACCCCA+GGG | - | chr1.3:2432780-2432799 | None:intergenic | 45.0% | |
| TAACCTGAGAAAGCCAATGG+AGG | - | chr1.3:2432072-2432091 | None:intergenic | 45.0% | |
| TCTCAAGAAATGGTGCATGG+GGG | + | chr1.3:2434220-2434239 | MS.gene26992:CDS | 45.0% | |
| TGAACATAGGTGAATGGTGG+AGG | - | chr1.3:2434641-2434660 | None:intergenic | 45.0% | |
| TTTCATCCTCCAAACCACCA+GGG | - | chr1.3:2434084-2434103 | None:intergenic | 45.0% | |
| TTTCTTAACCAGTACCCCAG+GGG | - | chr1.3:2432779-2432798 | None:intergenic | 45.0% | |
| ! | ATGGTGGAGGATGACACAAA+TGG | - | chr1.3:2434628-2434647 | None:intergenic | 45.0% |
| ! | GGTCCTTTCTTTTATGGGCA+GGG | + | chr1.3:2434249-2434268 | MS.gene26992:CDS | 45.0% |
| ! | TGGTCCTTTCTTTTATGGGC+AGG | + | chr1.3:2434248-2434267 | MS.gene26992:CDS | 45.0% |
| !! | GCTGTACCAGGCACTTTTTA+TGG | + | chr1.3:2431998-2432017 | MS.gene26992:intron | 45.0% |
| !!! | TGTTTTGTTTCCGCTGTACC+AGG | + | chr1.3:2431986-2432005 | MS.gene26992:intron | 45.0% |
| AGCAACAGTTGGGTGACGTT+GGG | - | chr1.3:2434285-2434304 | None:intergenic | 50.0% | |
| AGCACAGTCCCTTATGACCA+TGG | + | chr1.3:2434321-2434340 | MS.gene26992:CDS | 50.0% | |
| AGCATGTGTCATGTGCCCTT+AGG | - | chr1.3:2432453-2432472 | None:intergenic | 50.0% | |
| AGGGCACATGACACATGCTA+AGG | + | chr1.3:2432454-2432473 | MS.gene26992:intron | 50.0% | |
| CATCAGGACCTAATGCCCTA+AGG | + | chr1.3:2431765-2431784 | MS.gene26992:CDS | 50.0% | |
| CCAAAGTTAAGGGCCATGAG+TGG | + | chr1.3:2434600-2434619 | MS.gene26992:intron | 50.0% | |
| CCACTCATGGCCCTTAACTT+TGG | - | chr1.3:2434603-2434622 | None:intergenic | 50.0% | |
| CTTTCATCCTCCAAACCACC+AGG | - | chr1.3:2434085-2434104 | None:intergenic | 50.0% | |
| GCATGTGTCATGTGCCCTTA+GGG | - | chr1.3:2432452-2432471 | None:intergenic | 50.0% | |
| GTTGAATCGACCAGCACCAA+AGG | + | chr1.3:2431832-2431851 | MS.gene26992:intron | 50.0% | |
| TAGCAACAGTTGGGTGACGT+TGG | - | chr1.3:2434286-2434305 | None:intergenic | 50.0% | |
| TGATTCTATATGCAGGCCCC+TGG | + | chr1.3:2434064-2434083 | MS.gene26992:intron | 50.0% | |
| TGCAAAGACCATAAGGGCTG+TGG | + | chr1.3:2435079-2435098 | MS.gene26992:CDS | 50.0% | |
| TTCATCCTCCAAACCACCAG+GGG | - | chr1.3:2434083-2434102 | None:intergenic | 50.0% | |
| TTTGCCACGTGTCGAAGATG+GGG | - | chr1.3:2434033-2434052 | None:intergenic | 50.0% | |
| ! | GGTGGTTTGGAGGATGAAAG+AGG | + | chr1.3:2434085-2434104 | MS.gene26992:CDS | 50.0% |
| !! | TAGCCTCCATTGGCTTTCTC+AGG | + | chr1.3:2432066-2432085 | MS.gene26992:intron | 50.0% |
| AATGGTGCATGGGGGACGAA+TGG | + | chr1.3:2434228-2434247 | MS.gene26992:CDS | 55.0% | |
| TCTTGTTAACCGGTGCCCCT+GGG | + | chr1.3:2432761-2432780 | MS.gene26992:intron | 55.0% | |
| TTCACCCCATCTTCGACACG+TGG | + | chr1.3:2434026-2434045 | MS.gene26992:intron | 55.0% | |
| TTCTATATGCAGGCCCCTGG+TGG | + | chr1.3:2434067-2434086 | MS.gene26992:intron | 55.0% | |
| CTTGTTAACCGGTGCCCCTG+GGG | + | chr1.3:2432762-2432781 | MS.gene26992:intron | 60.0% | |
| TATGCAGGCCCCTGGTGGTT+TGG | + | chr1.3:2434072-2434091 | MS.gene26992:intron | 60.0% | |
| ! | AATCGGTGTCCCCGAGACCT+TGG | - | chr1.3:2432913-2432932 | None:intergenic | 60.0% |
| ! | GTCTTGTTAACCGGTGCCCC+TGG | + | chr1.3:2432760-2432779 | MS.gene26992:intron | 60.0% |
| ! | AACCAGTACCCCAGGGGCAC+CGG | - | chr1.3:2432773-2432792 | None:intergenic | 65.0% |
| AACCGGTGCCCCTGGGGTAC+TGG | + | chr1.3:2432768-2432787 | MS.gene26992:intron | 70.0% | |
| ! | GCAGGCCCCTGGTGGTTTGG+AGG | + | chr1.3:2434075-2434094 | MS.gene26992:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 2431734 | 2435244 | 2431734 | ID=MS.gene26992 |
| chr1.3 | mRNA | 2431734 | 2435244 | 2431734 | ID=MS.gene26992.t1;Parent=MS.gene26992 |
| chr1.3 | exon | 2431734 | 2431787 | 2431734 | ID=MS.gene26992.t1.exon1;Parent=MS.gene26992.t1 |
| chr1.3 | CDS | 2431734 | 2431787 | 2431734 | ID=cds.MS.gene26992.t1;Parent=MS.gene26992.t1 |
| chr1.3 | exon | 2434079 | 2434351 | 2434079 | ID=MS.gene26992.t1.exon2;Parent=MS.gene26992.t1 |
| chr1.3 | CDS | 2434079 | 2434351 | 2434079 | ID=cds.MS.gene26992.t1;Parent=MS.gene26992.t1 |
| chr1.3 | exon | 2434891 | 2435244 | 2434891 | ID=MS.gene26992.t1.exon3;Parent=MS.gene26992.t1 |
| chr1.3 | CDS | 2434891 | 2435244 | 2434891 | ID=cds.MS.gene26992.t1;Parent=MS.gene26992.t1 |
| Gene Sequence |
| Protein sequence |
