AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene053505


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene053505.t1 MTR_4g086130 98.454 388 6 0 1 388 82 469 0.0 791
MS.gene053505.t1 MTR_4g086040 86.305 387 52 1 1 386 85 471 0.0 684
MS.gene053505.t1 MTR_1g019410 67.526 388 123 2 1 386 82 468 0.0 560
MS.gene053505.t1 MTR_8g072260 55.128 390 166 5 1 388 84 466 2.22e-157 451
MS.gene053505.t1 MTR_5g025610 54.005 387 169 5 1 385 82 461 2.94e-152 438
MS.gene053505.t1 MTR_8g072260 55.278 360 152 5 1 358 84 436 1.07e-143 416
MS.gene053505.t1 MTR_5g025610 53.552 366 161 5 1 364 82 440 5.61e-140 406
MS.gene053505.t1 MTR_1g037580 54.688 384 171 2 1 383 91 472 1.14e-137 401
MS.gene053505.t1 MTR_8g072260 52.188 320 144 5 1 318 84 396 1.22e-114 342
MS.gene053505.t1 MTR_5g025610 51.064 329 152 5 1 327 82 403 1.01e-113 338
MS.gene053505.t1 MTR_6g034940 31.105 389 255 5 2 381 91 475 3.87e-71 231
MS.gene053505.t1 MTR_2g031930 32.308 390 254 6 1 383 98 484 9.52e-68 222
MS.gene053505.t1 MTR_2g031930 33.151 365 234 6 1 358 94 455 2.74e-66 217
MS.gene053505.t1 MTR_2g031920 31.888 392 256 5 1 383 94 483 2.16e-65 216
MS.gene053505.t1 MTR_0045s0070 32.564 390 253 8 1 387 95 477 2.17e-63 210
MS.gene053505.t1 MTR_8g077810 32.663 398 238 10 6 383 89 476 4.56e-63 210
MS.gene053505.t1 MTR_0045s0060 30.769 390 260 8 1 387 13 395 5.55e-63 207
MS.gene053505.t1 MTR_0045s0060 31.008 387 257 8 1 384 95 474 1.03e-61 206
MS.gene053505.t1 MTR_5g082520 31.044 364 234 6 5 359 83 438 3.13e-61 204
MS.gene053505.t1 MTR_3g112120 30.127 395 265 7 2 388 94 485 2.01e-60 203
MS.gene053505.t1 MTR_8g100135 29.534 386 259 6 9 385 94 475 2.35e-60 202
MS.gene053505.t1 MTR_8g089800 32.973 370 239 5 1 362 96 464 3.37e-60 202
MS.gene053505.t1 MTR_5g092150 31.234 381 253 5 7 380 86 464 8.69e-59 198
MS.gene053505.t1 MTR_3g467130 29.793 386 262 3 6 383 89 473 2.50e-58 197
MS.gene053505.t1 MTR_8g016180 31.856 361 238 5 3 359 90 446 4.17e-58 196
MS.gene053505.t1 MTR_3g467140 30.208 384 259 3 6 381 89 471 1.64e-57 195
MS.gene053505.t1 MTR_5g014250 31.990 397 256 8 1 387 98 490 2.43e-57 195
MS.gene053505.t1 MTR_3g007320 29.534 386 259 8 5 384 83 461 4.28e-57 193
MS.gene053505.t1 MTR_0045s0070 32.687 361 233 8 1 358 95 448 1.06e-56 192
MS.gene053505.t1 MTR_4g005230 32.292 384 246 7 1 376 96 473 2.03e-55 189
MS.gene053505.t1 MTR_6g015910 29.793 386 258 8 5 384 83 461 3.76e-55 188
MS.gene053505.t1 MTR_5g091760 29.306 389 264 4 1 383 90 473 6.44e-55 188
MS.gene053505.t1 MTR_3g467140 32.239 335 218 3 55 381 5 338 7.63e-55 184
MS.gene053505.t1 MTR_5g010750 29.041 365 252 5 3 362 84 446 2.24e-54 187
MS.gene053505.t1 MTR_5g020020 31.202 391 244 9 9 383 95 476 8.53e-54 185
MS.gene053505.t1 MTR_5g021220 30.673 401 254 6 3 383 89 485 1.12e-53 185
MS.gene053505.t1 MTR_5g010750 29.086 361 249 5 3 358 84 442 2.61e-53 183
MS.gene053505.t1 MTR_8g076940 28.158 380 270 3 4 381 101 479 4.41e-53 184
MS.gene053505.t1 MTR_3g070380 29.973 367 236 8 5 359 84 441 4.51e-53 183
MS.gene053505.t1 MTR_7g033040 30.707 368 250 5 6 370 89 454 9.97e-53 182
MS.gene053505.t1 MTR_5g014240 32.405 395 257 6 1 387 97 489 1.31e-52 182
MS.gene053505.t1 MTR_8g012970 31.880 367 235 9 19 376 115 475 6.58e-52 180
MS.gene053505.t1 MTR_8g076510 30.052 386 258 7 3 381 92 472 1.48e-51 179
MS.gene053505.t1 MTR_7g016040 27.415 383 270 6 4 383 82 459 1.88e-51 179
MS.gene053505.t1 MTR_8g089190 31.229 301 198 5 91 384 143 441 5.71e-48 169
MS.gene053505.t1 MTR_1g032950 29.504 383 248 5 1 376 96 463 3.08e-46 165
MS.gene053505.t1 MTR_5g020020 31.845 336 205 8 63 383 76 402 5.21e-46 163
MS.gene053505.t1 MTR_8g016180 29.664 327 223 4 3 326 90 412 3.36e-45 160
MS.gene053505.t1 MTR_0045s0080 29.063 320 211 7 1 317 95 401 4.94e-42 152
MS.gene053505.t1 MTR_6g069000 28.726 369 241 8 3 358 93 452 6.63e-41 150
MS.gene053505.t1 MTR_6g069000 28.726 369 241 8 3 358 103 462 8.33e-41 150
MS.gene053505.t1 MTR_8g076940 27.439 328 234 3 4 328 101 427 9.16e-39 144
MS.gene053505.t1 MTR_8g100135 25.085 295 209 5 9 295 94 384 8.76e-30 119
MS.gene053505.t1 MTR_8g076940 26.667 285 205 3 4 286 101 383 3.99e-29 117
MS.gene053505.t1 MTR_8g076940 26.950 282 202 3 4 283 101 380 4.48e-29 117
MS.gene053505.t1 MTR_7g016040 25.000 280 205 4 5 283 83 358 5.47e-28 113
MS.gene053505.t1 MTR_0147s0030 24.691 405 256 14 1 372 124 512 1.05e-22 100
MS.gene053505.t1 MTR_7g055793 25.428 409 248 17 1 372 62 450 1.27e-22 99.4
MS.gene053505.t1 MTR_8g008530 25.128 390 256 11 1 361 110 492 1.45e-22 99.8
MS.gene053505.t1 MTR_1g032980 26.016 246 176 2 12 251 79 324 2.21e-22 98.2
MS.gene053505.t1 MTR_7g055793 25.428 409 248 17 1 372 117 505 2.54e-22 99.0
MS.gene053505.t1 MTR_8g006495 29.098 244 147 7 144 374 118 348 3.24e-21 94.4
MS.gene053505.t1 MTR_8g006450 29.098 244 147 7 144 374 231 461 1.47e-20 93.6
MS.gene053505.t1 MTR_8g469360 26.276 392 220 18 14 361 31 397 9.16e-20 90.9
MS.gene053505.t1 MTR_8g089190 27.053 207 144 4 91 292 143 347 9.82e-20 89.7
MS.gene053505.t1 MTR_1g031700 28.696 230 146 6 146 363 244 467 9.94e-20 91.3
MS.gene053505.t1 MTR_7g006900 26.667 315 204 11 66 361 139 445 1.33e-19 90.5
MS.gene053505.t1 MTR_2g073440 23.457 405 278 10 1 387 79 469 2.10e-19 90.1
MS.gene053505.t1 MTR_0457s0020 27.500 200 138 6 19 215 17 212 4.79e-19 85.5
MS.gene053505.t1 MTR_2g073480 23.210 405 279 10 1 387 12 402 7.38e-19 87.8
MS.gene053505.t1 MTR_7g079440 26.906 223 140 6 156 362 406 621 2.19e-18 87.4
MS.gene053505.t1 MTR_4g029690 27.189 217 146 5 1 210 96 307 2.27e-18 85.5
MS.gene053505.t1 MTR_4g071710 27.237 257 153 7 135 361 229 481 2.49e-18 87.0
MS.gene053505.t1 MTR_2g437840 26.606 218 155 2 147 363 250 463 2.62e-18 87.0
MS.gene053505.t1 MTR_5g018980 24.069 403 253 14 1 361 83 474 3.31e-18 86.7
MS.gene053505.t1 MTR_5g021390 23.869 398 258 11 2 361 91 481 5.59e-18 85.9
MS.gene053505.t1 MTR_3g093530 28.889 225 142 7 148 361 280 497 6.92e-18 85.5
MS.gene053505.t1 MTR_1g103670 29.258 229 144 7 147 363 245 467 1.34e-17 84.7
MS.gene053505.t1 MTR_1g055325 26.838 272 169 8 130 387 252 507 1.55e-17 84.7
MS.gene053505.t1 MTR_3g058060 24.138 406 249 15 1 363 85 474 1.59e-17 84.7
MS.gene053505.t1 MTR_4g095050 23.194 263 185 6 110 362 211 466 2.98e-17 83.6
MS.gene053505.t1 MTR_2g019640 22.992 361 233 10 28 355 117 465 6.39e-17 82.8
MS.gene053505.t1 MTR_0181s0030 22.864 398 263 13 3 363 82 472 6.43e-17 82.8
MS.gene053505.t1 MTR_2g073420 24.460 417 259 11 1 376 90 491 6.94e-17 82.4
MS.gene053505.t1 MTR_6g017325 28.455 246 156 8 125 361 246 480 7.10e-17 82.4
MS.gene053505.t1 MTR_5g016410 23.744 219 162 2 146 363 249 463 1.02e-16 82.0
MS.gene053505.t1 MTR_8g098565 29.231 260 160 8 138 375 236 493 1.41e-16 81.6
MS.gene053505.t1 MTR_4g113650 23.261 417 276 15 2 384 110 516 1.68e-16 81.6
MS.gene053505.t1 MTR_6g035115 24.433 397 264 11 1 370 84 471 2.48e-16 80.9
MS.gene053505.t1 MTR_8g063280 26.282 312 184 12 96 371 177 478 3.32e-16 80.5
MS.gene053505.t1 MTR_5g009110 25.769 260 151 8 144 369 151 402 5.90e-16 79.3
MS.gene053505.t1 MTR_8g076290 22.111 398 266 9 2 361 82 473 6.03e-16 79.7
MS.gene053505.t1 MTR_5g009110 25.769 260 151 8 144 369 299 550 7.45e-16 79.7
MS.gene053505.t1 MTR_1g107295 24.112 394 247 14 6 368 117 489 9.15e-16 79.3
MS.gene053505.t1 MTR_1g062190 22.222 414 255 15 1 366 123 517 1.34e-15 78.6
MS.gene053505.t1 MTR_7g098550 26.494 385 246 15 2 361 106 478 1.39e-15 78.6
MS.gene053505.t1 MTR_5g072980 25.676 222 152 5 149 361 253 470 1.56e-15 78.6
MS.gene053505.t1 MTR_5g072930 25.676 222 152 5 149 361 253 470 1.56e-15 78.6
MS.gene053505.t1 MTR_7g098550 25.926 378 249 14 2 361 106 470 1.83e-15 78.2
MS.gene053505.t1 MTR_7g092600 24.498 249 160 6 137 363 240 482 1.85e-15 78.2
MS.gene053505.t1 MTR_5g007460 29.358 218 143 6 151 361 231 444 2.29e-15 77.8
MS.gene053505.t1 MTR_8g046240 26.496 234 156 6 140 361 245 474 3.79e-15 77.4
MS.gene053505.t1 MTR_4g088160 24.728 368 226 12 41 368 125 481 4.74e-15 77.0
MS.gene053505.t1 MTR_4g062500 24.198 343 206 8 69 368 156 487 5.67e-15 76.6
MS.gene053505.t1 MTR_6g022450 28.804 184 119 4 186 361 301 480 6.09e-15 76.6
MS.gene053505.t1 MTR_1g022040 22.414 406 291 10 1 387 103 503 7.92e-15 76.3
MS.gene053505.t1 MTR_4g035330 26.168 214 149 3 148 360 243 448 8.92e-15 76.3
MS.gene053505.t1 MTR_4g062510 25.391 256 159 5 140 368 241 491 9.14e-15 76.3
MS.gene053505.t1 MTR_1g085680 22.137 393 266 11 20 381 127 510 9.18e-15 76.3
MS.gene053505.t1 MTR_7g103450 24.537 216 150 3 154 361 275 485 9.53e-15 76.3
MS.gene053505.t1 MTR_5g095220 23.352 364 227 12 32 361 93 438 1.47e-14 75.5
MS.gene053505.t1 MTR_4g094772 26.636 214 148 3 148 360 246 451 1.59e-14 75.5
MS.gene053505.t1 MTR_0171s0020 25.346 217 147 5 158 363 266 478 1.74e-14 75.1
MS.gene053505.t1 MTR_1g103680 29.437 231 143 8 146 363 245 468 1.82e-14 75.1
MS.gene053505.t1 MTR_4g094775 24.272 206 149 3 158 362 263 462 1.93e-14 75.1
MS.gene053505.t1 MTR_5g014230 39.535 86 51 1 302 386 2 87 2.71e-14 68.9
MS.gene053505.t1 MTR_7g056103 22.807 399 264 11 3 361 82 476 2.79e-14 74.7
MS.gene053505.t1 MTR_8g046210 26.068 234 157 6 140 361 245 474 2.84e-14 74.7
MS.gene053505.t1 MTR_5g094540 23.038 395 258 16 1 361 86 468 2.95e-14 74.3
MS.gene053505.t1 MTR_5g016440 23.737 198 144 3 169 363 267 460 3.40e-14 74.3
MS.gene053505.t1 MTR_5g007550 28.000 200 132 5 168 361 272 465 6.22e-14 73.6
MS.gene053505.t1 MTR_1g107300 27.128 188 113 5 194 368 1 177 7.92e-14 70.5
MS.gene053505.t1 MTR_2g437880 24.870 193 140 2 169 360 277 465 8.27e-14 73.2
MS.gene053505.t1 MTR_8g012590 28.261 184 120 4 186 361 290 469 8.78e-14 73.2
MS.gene053505.t1 MTR_5g007450 27.000 200 134 4 168 361 272 465 1.13e-13 72.8
MS.gene053505.t1 MTR_1g442730 24.627 402 248 13 1 361 81 468 1.22e-13 72.8
MS.gene053505.t1 MTR_1g091003 29.032 217 143 6 151 361 252 463 1.58e-13 72.4
MS.gene053505.t1 MTR_5g019010 23.232 396 262 15 1 361 83 471 1.62e-13 72.4
MS.gene053505.t1 MTR_8g080520 22.680 388 256 11 5 359 119 495 1.73e-13 72.4
MS.gene053505.t1 MTR_7g012330 28.365 208 126 5 166 361 271 467 2.02e-13 72.0
MS.gene053505.t1 MTR_8g469300 25.926 216 146 4 158 363 266 477 3.33e-13 71.2
MS.gene053505.t1 MTR_5g034900 29.114 237 146 6 144 362 257 489 4.06e-13 70.9
MS.gene053505.t1 MTR_8g466180 25.373 402 246 18 1 361 81 469 4.17e-13 70.9
MS.gene053505.t1 MTR_5g026520 25.389 193 130 3 179 361 291 479 5.24e-13 70.9
MS.gene053505.t1 MTR_3g104560 25.200 250 168 7 121 357 260 503 5.37e-13 70.9
MS.gene053505.t1 MTR_3g104560 24.803 254 164 7 121 357 125 368 6.37e-13 70.1
MS.gene053505.t1 MTR_5g095290 23.393 389 262 13 1 361 88 468 9.26e-13 70.1
MS.gene053505.t1 MTR_1g097240 25.217 230 153 5 147 361 239 464 9.62e-13 69.7
MS.gene053505.t1 MTR_1g015860 24.923 325 191 10 57 357 200 495 1.03e-12 69.7
MS.gene053505.t1 MTR_5g095260 22.646 393 261 12 1 361 88 469 1.27e-12 69.3
MS.gene053505.t1 MTR_4g104570 26.374 182 124 3 196 371 1 178 1.52e-12 66.6
MS.gene053505.t1 MTR_8g073960 25.455 220 150 5 162 371 288 503 1.58e-12 69.3
MS.gene053505.t1 MTR_7g075610 24.280 243 166 6 134 362 234 472 1.67e-12 68.9
MS.gene053505.t1 MTR_7g075600 25.833 240 162 7 134 361 235 470 1.68e-12 68.9
MS.gene053505.t1 MTR_0171s0030 26.531 196 129 5 158 342 178 369 1.87e-12 68.6
MS.gene053505.t1 MTR_3g057980 22.000 400 255 11 1 361 83 464 2.08e-12 68.9
MS.gene053505.t1 MTR_0025s0110 23.262 374 242 12 20 361 139 499 2.12e-12 68.9
MS.gene053505.t1 MTR_3g058230 22.680 388 261 14 1 359 12 389 2.61e-12 68.2
MS.gene053505.t1 MTR_2g010530 21.212 396 259 9 1 359 81 460 2.64e-12 68.6
MS.gene053505.t1 MTR_5g094520 22.704 392 263 14 1 361 12 394 4.52e-12 67.4
MS.gene053505.t1 MTR_2g010290 30.542 203 119 6 174 361 308 503 5.68e-12 67.4
MS.gene053505.t1 MTR_5g094520 22.704 392 263 14 1 361 117 499 7.91e-12 67.0
MS.gene053505.t1 MTR_3g058220 22.306 399 260 15 1 361 83 469 8.77e-12 67.0
MS.gene053505.t1 MTR_5g073320 22.689 357 241 13 32 361 121 469 9.78e-12 66.6
MS.gene053505.t1 MTR_8g073950 26.906 223 143 6 162 371 284 499 1.20e-11 66.6
MS.gene053505.t1 MTR_8g042020 24.054 370 245 12 23 361 132 496 1.38e-11 66.2
MS.gene053505.t1 MTR_4g054920 28.235 255 154 9 148 385 272 514 1.79e-11 65.9
MS.gene053505.t1 MTR_6g008500 24.155 207 139 5 161 357 297 495 3.33e-11 65.1
MS.gene053505.t1 MTR_5g094840 22.194 392 266 12 1 361 91 474 3.50e-11 65.1
MS.gene053505.t1 MTR_0059s0170 20.865 393 273 12 1 361 84 470 3.73e-11 65.1
MS.gene053505.t1 MTR_7g027960 22.835 254 154 5 147 368 234 477 5.78e-11 64.3
MS.gene053505.t1 MTR_3g058250 22.532 395 265 14 1 361 82 469 5.84e-11 64.3
MS.gene053505.t1 MTR_3g076530 24.336 226 157 7 146 361 250 471 5.89e-11 64.3
MS.gene053505.t1 MTR_7g075580 24.675 231 155 7 146 362 246 471 6.21e-11 64.3
MS.gene053505.t1 MTR_3g057800 20.663 392 274 12 1 361 82 467 8.02e-11 63.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene053505.t1 AT3G19270 71.244 386 110 1 1 386 81 465 0.0 592
MS.gene053505.t1 AT3G19270 71.031 359 103 1 1 359 81 438 0.0 551
MS.gene053505.t1 AT4G19230 57.513 386 157 3 1 386 83 461 1.87e-167 477
MS.gene053505.t1 AT5G45340 56.736 386 160 4 1 386 83 461 1.77e-163 466
MS.gene053505.t1 AT4G19230 56.201 379 152 5 1 374 83 452 6.33e-155 446
MS.gene053505.t1 AT5G45340 56.983 358 147 4 1 358 83 433 1.38e-150 433
MS.gene053505.t1 AT2G29090 54.427 384 173 2 1 383 1 383 2.88e-150 430
MS.gene053505.t1 AT2G29090 54.427 384 173 2 1 383 96 478 7.43e-148 427
MS.gene053505.t1 AT2G29090 54.427 384 173 2 1 383 96 478 7.43e-148 427
MS.gene053505.t1 AT1G05160 33.929 392 247 7 1 383 98 486 2.98e-72 234
MS.gene053505.t1 AT1G05160 33.929 392 247 7 1 383 98 486 2.98e-72 234
MS.gene053505.t1 AT2G32440 34.518 394 246 8 1 386 97 486 1.74e-69 227
MS.gene053505.t1 AT2G32440 34.518 394 246 8 1 386 97 486 1.74e-69 227
MS.gene053505.t1 AT2G29090 48.230 226 115 2 1 225 96 320 3.07e-63 206
MS.gene053505.t1 AT1G19630 31.888 392 255 8 2 386 88 474 2.67e-60 202
MS.gene053505.t1 AT5G36110 31.899 395 246 9 1 383 89 472 5.22e-59 199
MS.gene053505.t1 AT5G05690 32.558 387 241 8 5 381 86 462 7.31e-57 193
MS.gene053505.t1 AT3G50660 31.294 425 236 10 9 387 98 512 2.58e-56 192
MS.gene053505.t1 AT1G19630 31.593 364 238 7 2 359 88 446 2.57e-55 189
MS.gene053505.t1 AT3G30180 30.194 361 246 5 6 363 85 442 1.70e-53 184
MS.gene053505.t1 AT5G38970 28.495 372 257 6 6 374 4 369 2.36e-52 179
MS.gene053505.t1 AT5G38970 28.495 372 257 6 6 374 4 369 2.36e-52 179
MS.gene053505.t1 AT1G12740 29.348 368 247 4 3 362 84 446 3.49e-52 181
MS.gene053505.t1 AT1G12740 29.348 368 247 4 3 362 90 452 4.19e-52 181
MS.gene053505.t1 AT5G38970 28.532 361 252 5 6 363 85 442 1.32e-51 179
MS.gene053505.t1 AT1G12740 28.877 374 247 5 3 362 84 452 1.40e-49 174
MS.gene053505.t1 AT2G42850 30.000 390 259 7 1 383 97 479 2.05e-49 174
MS.gene053505.t1 AT5G05690 31.818 352 220 8 40 381 2 343 2.47e-49 170
MS.gene053505.t1 AT3G13730 30.874 366 240 6 3 359 104 465 4.36e-49 173
MS.gene053505.t1 AT3G13730 30.685 365 240 6 3 358 104 464 1.35e-47 168
MS.gene053505.t1 AT4G36380 29.235 366 249 5 3 359 122 486 6.51e-47 168
MS.gene053505.t1 AT5G05690 32.188 320 202 6 5 318 86 396 1.98e-44 159
MS.gene053505.t1 AT1G55940 29.111 371 241 10 3 357 99 463 2.95e-44 159
MS.gene053505.t1 AT1G55940 28.457 376 247 10 3 362 99 468 7.91e-44 159
MS.gene053505.t1 AT5G48000 28.974 390 267 8 1 383 86 472 3.43e-43 157
MS.gene053505.t1 AT5G48000 28.974 390 267 8 1 383 86 472 3.43e-43 157
MS.gene053505.t1 AT5G48000 28.974 390 267 8 1 383 86 472 3.43e-43 157
MS.gene053505.t1 AT5G48000 28.974 390 267 8 1 383 86 472 3.43e-43 157
MS.gene053505.t1 AT5G48000 28.974 390 267 8 1 383 86 472 3.43e-43 157
MS.gene053505.t1 AT5G48000 28.974 390 267 8 1 383 86 472 3.43e-43 157
MS.gene053505.t1 AT5G48000 28.974 390 267 8 1 383 127 513 7.45e-43 157
MS.gene053505.t1 AT5G14400 28.244 393 234 12 10 384 2 364 1.17e-42 153
MS.gene053505.t1 AT1G19630 30.650 323 213 7 2 318 88 405 1.27e-42 154
MS.gene053505.t1 AT5G14400 28.212 397 237 12 6 384 52 418 3.30e-42 153
MS.gene053505.t1 AT1G73340 27.614 373 239 8 3 359 96 453 1.45e-41 152
MS.gene053505.t1 AT5G38970 27.760 317 225 4 6 321 85 398 5.43e-41 150
MS.gene053505.t1 AT5G14400 28.610 367 220 10 6 359 52 389 3.07e-40 147
MS.gene053505.t1 AT3G50660 29.446 343 200 8 9 318 98 431 5.11e-40 147
MS.gene053505.t1 AT1G78490 28.307 378 261 8 3 373 88 462 3.67e-38 143
MS.gene053505.t1 AT3G44970 26.519 362 249 6 11 361 96 451 4.73e-37 140
MS.gene053505.t1 AT4G15300 26.286 350 242 7 21 361 93 435 4.91e-34 132
MS.gene053505.t1 AT4G15300 26.286 350 242 7 21 361 103 445 5.20e-34 132
MS.gene053505.t1 AT1G65670 27.714 350 233 7 21 361 103 441 1.14e-33 131
MS.gene053505.t1 AT4G15396 26.437 348 245 7 21 361 103 446 1.14e-33 130
MS.gene053505.t1 AT4G15393 27.794 349 237 9 21 361 103 444 2.13e-33 130
MS.gene053505.t1 AT5G36130 44.444 135 73 2 251 383 1 135 1.88e-32 119
MS.gene053505.t1 AT4G15396 26.301 346 244 7 21 359 103 444 3.11e-32 126
MS.gene053505.t1 AT4G15300 25.549 364 241 9 21 361 101 457 1.21e-30 122
MS.gene053505.t1 AT3G30290 25.360 347 249 7 21 361 33 375 7.93e-30 119
MS.gene053505.t1 AT5G36110 28.383 303 194 8 1 292 89 379 1.12e-28 115
MS.gene053505.t1 AT4G15310 28.613 346 231 8 25 361 110 448 4.55e-28 115
MS.gene053505.t1 AT1G12740 25.000 288 206 3 3 285 84 366 1.86e-27 112
MS.gene053505.t1 AT1G78490 26.250 320 230 6 3 318 88 405 6.33e-27 111
MS.gene053505.t1 AT4G15396 24.571 350 228 8 21 361 103 425 4.74e-26 109
MS.gene053505.t1 AT4G15393 26.159 302 213 7 21 318 103 398 8.94e-23 99.4
MS.gene053505.t1 AT2G42850 28.428 299 200 7 1 292 97 388 9.06e-23 99.4
MS.gene053505.t1 AT4G15396 24.252 301 222 5 21 318 103 400 1.21e-22 99.0
MS.gene053505.t1 AT5G14400 26.207 290 191 8 6 283 52 330 7.99e-22 95.5
MS.gene053505.t1 AT3G28740 25.806 217 156 2 147 362 256 468 2.43e-21 95.9
MS.gene053505.t1 AT4G37370 25.000 220 160 2 147 365 247 462 2.59e-21 95.9
MS.gene053505.t1 AT4G37400 27.347 245 161 5 132 366 228 465 4.64e-21 95.1
MS.gene053505.t1 AT4G37320 24.091 220 162 2 147 365 248 463 1.95e-20 93.2
MS.gene053505.t1 AT2G26710 23.724 392 253 12 29 387 137 515 2.05e-20 93.2
MS.gene053505.t1 AT4G36380 24.825 286 209 4 3 283 122 406 2.13e-20 92.8
MS.gene053505.t1 AT2G23190 24.771 218 159 2 147 363 292 505 7.66e-20 91.7
MS.gene053505.t1 AT5G04330 23.618 398 264 11 1 361 78 472 2.17e-19 90.1
MS.gene053505.t1 AT1G11680 29.020 255 155 7 133 374 222 463 3.30e-19 89.7
MS.gene053505.t1 AT1G66540 25.688 218 154 3 149 365 81 291 7.70e-19 87.0
MS.gene053505.t1 AT1G66540 25.688 218 154 3 149 365 140 350 8.76e-19 87.4
MS.gene053505.t1 AT1G74110 23.171 410 253 15 3 363 115 511 1.15e-18 88.2
MS.gene053505.t1 AT5G24910 22.525 404 274 12 17 386 133 531 1.53e-18 87.8
MS.gene053505.t1 AT5G57220 28.293 205 140 3 161 362 255 455 1.75e-18 87.4
MS.gene053505.t1 AT4G37360 26.768 198 140 2 169 365 270 463 3.58e-18 86.7
MS.gene053505.t1 AT4G37340 24.887 221 160 3 147 365 247 463 3.59e-18 86.7
MS.gene053505.t1 AT4G15110 26.154 260 150 7 144 369 307 558 4.10e-18 86.7
MS.gene053505.t1 AT4G37430 22.590 332 222 10 45 362 154 464 6.57e-18 85.9
MS.gene053505.t1 AT3G20940 24.110 365 240 12 32 363 122 482 1.12e-17 85.1
MS.gene053505.t1 AT2G28860 22.689 357 245 8 28 362 114 461 1.29e-17 84.7
MS.gene053505.t1 AT4G15393 26.941 219 153 4 103 318 151 365 3.50e-17 82.8
MS.gene053505.t1 AT4G37410 25.523 239 163 5 132 362 230 461 4.66e-17 83.2
MS.gene053505.t1 AT4G37330 25.229 218 158 2 147 363 245 458 7.80e-17 82.4
MS.gene053505.t1 AT5G52400 25.581 387 248 12 22 381 140 513 7.82e-17 82.4
MS.gene053505.t1 AT2G27010 23.462 260 179 6 132 375 214 469 9.43e-17 82.0
MS.gene053505.t1 AT2G23220 22.273 220 166 2 147 365 263 478 2.31e-16 80.9
MS.gene053505.t1 AT5G36140 26.160 237 157 7 1 226 85 314 2.58e-16 79.7
MS.gene053505.t1 AT4G36220 22.444 401 266 9 2 361 87 483 3.29e-16 80.5
MS.gene053505.t1 AT5G24900 26.961 204 133 5 189 383 210 406 3.79e-16 80.1
MS.gene053505.t1 AT3G61040 24.433 397 264 9 1 368 79 468 4.81e-16 80.1
MS.gene053505.t1 AT5G24900 26.961 204 133 5 189 383 327 523 6.17e-16 79.7
MS.gene053505.t1 AT2G28850 22.129 357 247 7 28 362 114 461 7.62e-16 79.3
MS.gene053505.t1 AT2G34500 22.254 346 233 10 28 349 113 446 9.61e-16 79.0
MS.gene053505.t1 AT5G67310 29.018 224 133 7 148 360 261 469 1.15e-15 79.0
MS.gene053505.t1 AT1G31800 24.757 206 141 5 164 362 344 542 1.33e-15 79.0
MS.gene053505.t1 AT4G31940 27.604 192 120 6 165 342 283 469 2.51e-15 77.8
MS.gene053505.t1 AT5G42580 21.024 371 248 11 24 363 110 466 3.88e-15 77.4
MS.gene053505.t1 AT5G25120 28.729 181 115 4 191 361 285 461 4.38e-15 77.0
MS.gene053505.t1 AT1G64930 30.303 198 124 6 178 365 291 484 4.60e-15 77.0
MS.gene053505.t1 AT2G46660 23.393 389 252 15 4 359 122 497 7.63e-15 76.6
MS.gene053505.t1 AT4G31950 26.484 219 136 7 144 342 244 457 7.72e-15 76.3
MS.gene053505.t1 AT3G53130 22.927 410 257 14 1 366 123 517 9.97e-15 76.3
MS.gene053505.t1 AT5G36220 19.626 321 238 5 45 363 165 467 1.10e-14 75.9
MS.gene053505.t1 AT4G37310 24.314 255 176 6 140 381 238 488 1.11e-14 75.9
MS.gene053505.t1 AT2G42250 25.926 216 141 4 165 365 274 485 1.24e-14 75.9
MS.gene053505.t1 AT2G34490 21.600 375 267 10 28 379 114 484 1.44e-14 75.5
MS.gene053505.t1 AT5G06905 24.498 249 159 5 147 369 242 487 1.72e-14 75.5
MS.gene053505.t1 AT5G47990 24.074 378 240 17 24 363 113 481 2.38e-14 74.7
MS.gene053505.t1 AT5G36220 23.810 210 155 2 155 363 116 321 2.61e-14 73.9
MS.gene053505.t1 AT2G45580 24.180 244 163 5 140 368 90 326 5.14e-14 73.2
MS.gene053505.t1 AT1G50520 22.689 238 166 5 146 369 257 490 6.85e-14 73.6
MS.gene053505.t1 AT2G45580 24.180 244 163 5 140 368 244 480 9.78e-14 73.2
MS.gene053505.t1 AT1G50560 24.138 232 158 4 146 363 258 485 1.03e-13 72.8
MS.gene053505.t1 AT5G25140 26.857 175 118 3 193 361 291 461 1.05e-13 72.8
MS.gene053505.t1 AT5G25130 27.717 184 123 3 184 361 282 461 1.56e-13 72.4
MS.gene053505.t1 AT2G26170 26.695 236 152 5 132 353 256 484 1.94e-13 72.0
MS.gene053505.t1 AT5G25180 22.923 349 232 10 43 361 120 461 1.97e-13 72.0
MS.gene053505.t1 AT1G13710 23.325 403 244 15 3 359 99 482 2.07e-13 72.0
MS.gene053505.t1 AT2G26170 26.695 236 152 5 132 353 173 401 2.15e-13 71.6
MS.gene053505.t1 AT3G61880 23.485 396 247 14 4 359 118 497 2.89e-13 71.6
MS.gene053505.t1 AT3G25180 24.138 348 225 11 41 357 130 469 3.70e-13 71.2
MS.gene053505.t1 AT1G28430 22.363 237 166 4 147 369 253 485 3.74e-13 71.2
MS.gene053505.t1 AT2G40890 24.691 405 243 17 1 359 73 461 3.89e-13 71.2
MS.gene053505.t1 AT3G61880 23.485 396 247 14 4 359 118 497 4.30e-13 71.2
MS.gene053505.t1 AT5G09970 23.383 402 246 17 3 359 120 504 7.57e-13 70.5
MS.gene053505.t1 AT1G11600 27.083 192 125 3 179 359 291 478 1.89e-12 68.9
MS.gene053505.t1 AT2G46950 22.074 376 266 10 6 358 169 540 2.63e-12 68.6
MS.gene053505.t1 AT4G12330 25.225 222 155 4 146 361 265 481 5.52e-12 67.8
MS.gene053505.t1 AT4G15360 24.188 277 184 8 106 361 205 476 1.07e-11 66.6
MS.gene053505.t1 AT1G33730 24.138 232 164 4 138 361 112 339 1.52e-11 65.9
MS.gene053505.t1 AT1G33730 24.138 232 164 4 138 361 112 339 1.52e-11 65.9

Find 96 sgRNAs with CRISPR-Local

Find 153 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATGCTCCGGGTATCTTATT+TGG 0.135764 4.3:+26746965 None:intergenic
AATTTAAATTTACCTAAATT+TGG 0.175919 4.3:+26745662 None:intergenic
CGCTTTCCATGAAATGAAAA+AGG 0.175957 4.3:-26747431 MS.gene053505:intron
ATCAATTTCTTAATTGATTC+AGG 0.190411 4.3:+26747520 None:intergenic
CTTAAGCTGTTCTCTATAAT+TGG 0.196410 4.3:+26747027 None:intergenic
TTATGGCTTCAAGAAGTTTC+TGG 0.199013 4.3:+26746555 None:intergenic
TAAAATCAACATGTTCAATT+TGG 0.206623 4.3:+26745701 None:intergenic
CTAAACTACAAGGATGAAAA+AGG 0.227377 4.3:-26746689 MS.gene053505:CDS
AAAAGCAAAGAAAAGCTTAT+TGG 0.228275 4.3:-26747616 MS.gene053505:CDS
GGATTGGGAATGGGCTATAT+TGG 0.245695 4.3:+26745510 None:intergenic
TTGTATTGTGTAGGTAATAT+TGG 0.249201 4.3:-26746206 MS.gene053505:intron
GCATCATATCATTCACGTTT+AGG 0.258699 4.3:-26746165 MS.gene053505:CDS
ATCATACTCCAAAGCTCTTT+TGG 0.278846 4.3:-26746945 MS.gene053505:intron
TGAGGAGCAGGGTAGAATTC+TGG 0.289769 4.3:+26745939 None:intergenic
CATCATATCATTCACGTTTA+GGG 0.289792 4.3:-26746164 MS.gene053505:CDS
GTTTGGCAGGTGGGAGGTAG+TGG 0.304492 4.3:-26745549 MS.gene053505:intron
CCAAATGGCATAAAAGTATT+GGG 0.318496 4.3:+26745759 None:intergenic
ATCATCTAGTAACCAAATTT+AGG 0.324641 4.3:-26745674 MS.gene053505:intron
CTACAGCTAGTGTTCTTACT+TGG 0.327558 4.3:-26746601 MS.gene053505:CDS
CCTCTCTGTCTTTGGTAACT+TGG 0.334282 4.3:-26747053 MS.gene053505:CDS
ATGCTCCGGGTATCTTATTT+GGG 0.362430 4.3:+26746966 None:intergenic
AAGGTCTACCCACAAGATTT+TGG 0.363059 4.3:-26745481 MS.gene053505:CDS
AATTTGGCTAGCTCATTTCC+TGG 0.372245 4.3:+26745717 None:intergenic
GTCGGGATCCTCTCTGTCTT+TGG 0.372445 4.3:-26747061 MS.gene053505:CDS
GGCAGTTCTCTTTCAATGTC+GGG 0.378579 4.3:-26747078 MS.gene053505:intron
GGCATAAAAGTATTGGGCTT+TGG 0.388055 4.3:+26745765 None:intergenic
GGCATTACTTTCCAACCCTT+TGG 0.388434 4.3:+26745987 None:intergenic
TTGAATGAGAAGGATCTATT+AGG 0.391625 4.3:-26746719 MS.gene053505:CDS
TAAATTTGGTTACTAGATGA+TGG 0.399270 4.3:+26745676 None:intergenic
GAAGCTTACCAAAAGAGCTT+TGG 0.399481 4.3:+26746937 None:intergenic
GCCAAATGGCATAAAAGTAT+TGG 0.401232 4.3:+26745758 None:intergenic
GGTAGACCTTGCTGAGGGAT+TGG 0.409632 4.3:+26745494 None:intergenic
CATCCTTGTAGTTTAGCAAA+TGG 0.417428 4.3:+26746696 None:intergenic
AGGGAAAATGTTAACTGATA+AGG 0.417614 4.3:-26746669 MS.gene053505:CDS
TAGTATACCTCAAATCTTGA+TGG 0.420742 4.3:+26745906 None:intergenic
TCATTTCCTCACTAGAATCC+TGG 0.422005 4.3:-26747477 MS.gene053505:CDS
AGCTTTGGAGTATGATGCTC+CGG 0.432163 4.3:+26746952 None:intergenic
CATATTACAGGCTGAGCAAA+TGG 0.441567 4.3:-26746430 MS.gene053505:intron
TTTGGCAGGTGGGAGGTAGT+GGG 0.445491 4.3:-26745548 MS.gene053505:intron
GAAGTTGCTGATAATGTCAT+TGG 0.447481 4.3:-26746647 MS.gene053505:CDS
AAATATGCCACTTACTCATA+AGG 0.449078 4.3:-26746352 MS.gene053505:intron
TTTATCTGACCCCATGTCAA+TGG 0.449977 4.3:+26746375 None:intergenic
TGGAATCTTCCCTCCATCAT+TGG 0.450558 4.3:+26746395 None:intergenic
GTAGACCTTGCTGAGGGATT+GGG 0.450729 4.3:+26745495 None:intergenic
GGGTCAAAATTATGAGGAGC+AGG 0.462427 4.3:+26745927 None:intergenic
CAACACAAATCTTGCAGCCT+CGG 0.464916 4.3:+26747675 None:intergenic
TGGCAGTTCTCTTTCAATGT+CGG 0.465740 4.3:-26747079 MS.gene053505:intron
ATATGATGCTTGACATCCTT+AGG 0.466886 4.3:+26746179 None:intergenic
CATTTCCTCACTAGAATCCT+GGG 0.467464 4.3:-26747476 MS.gene053505:CDS
TTTGATTCTCCAAAATCTTG+TGG 0.468913 4.3:+26745472 None:intergenic
TGAGATAATTTGCAAGAGAA+AGG 0.471556 4.3:-26746750 MS.gene053505:CDS
CAATTATAGAGAACAGCTTA+AGG 0.481085 4.3:-26747026 MS.gene053505:CDS
AACACAAATCTTGCAGCCTC+GGG 0.482925 4.3:+26747676 None:intergenic
CCTTGCTGAGGGATTGGGAA+TGG 0.487232 4.3:+26745500 None:intergenic
TACCATACCTTATGAGTAAG+TGG 0.488143 4.3:+26746345 None:intergenic
GATATTTAATACCAAAGGGT+TGG 0.489000 4.3:-26745998 MS.gene053505:CDS
TTGATTCTCCAAAATCTTGT+GGG 0.489166 4.3:+26745473 None:intergenic
CTTGCTGAGGGATTGGGAAT+GGG 0.490233 4.3:+26745501 None:intergenic
CTTGATGGGTCAAAATTATG+AGG 0.491919 4.3:+26745921 None:intergenic
GAGATTACCACACTCGCATC+AGG 0.493579 4.3:-26747567 MS.gene053505:CDS
TCAAGGATATTTAATACCAA+AGG 0.499241 4.3:-26746003 MS.gene053505:intron
CAAGGATATTTAATACCAAA+GGG 0.500893 4.3:-26746002 MS.gene053505:intron
AATGGAGTGCACTCATGTCC+AGG 0.511845 4.3:-26745735 MS.gene053505:CDS
GGTAGAATTCTGGATTATGA+TGG 0.525486 4.3:+26745949 None:intergenic
TGCGAGTGTGGTAATCTCCT+TGG 0.532116 4.3:+26747572 None:intergenic
AGGCCATTTGCTAAACTACA+AGG 0.540203 4.3:-26746699 MS.gene053505:CDS
GAGTGCACTCCATTGCCAAA+TGG 0.545280 4.3:+26745744 None:intergenic
AGGTAATATTGGAAAGCCTA+AGG 0.566695 4.3:-26746195 MS.gene053505:CDS
GAGGGAAGATTCCATTGACA+TGG 0.569287 4.3:-26746386 MS.gene053505:CDS
GGAGCAGAGATTGAATGAGA+AGG 0.573774 4.3:-26746729 MS.gene053505:CDS
AATTACTGCATAGTAGAGAA+AGG 0.574763 4.3:-26747001 MS.gene053505:CDS
CGAGGCTGCAAGATTTGTGT+TGG 0.576217 4.3:-26747674 MS.gene053505:CDS
AGTATACCTCAAATCTTGAT+GGG 0.581207 4.3:+26745907 None:intergenic
TGTGGTTGATGTGGTATACA+AGG 0.599457 4.3:-26746137 MS.gene053505:CDS
GCAGTATGTGATACCAATGA+TGG 0.615249 4.3:-26746408 MS.gene053505:CDS
TCTTTCCCAAATAAGATACC+CGG 0.616936 4.3:-26746971 MS.gene053505:CDS
GTATGTGATACCAATGATGG+AGG 0.619371 4.3:-26746405 MS.gene053505:CDS
GCTTTGGAGTATGATGCTCC+GGG 0.619387 4.3:+26746953 None:intergenic
ATTCACGTTTAGGGAAGCTG+TGG 0.619792 4.3:-26746155 MS.gene053505:CDS
TAGGGAAGCTGTGGTTGATG+TGG 0.623756 4.3:-26746146 MS.gene053505:CDS
CGAGTTTCCTGATGCGAGTG+TGG 0.624057 4.3:+26747560 None:intergenic
AGGGAAGATTCCATTGACAT+GGG 0.626500 4.3:-26746385 MS.gene053505:CDS
TTGTGGGTAGACCTTGCTGA+GGG 0.629302 4.3:+26745489 None:intergenic
GAGGTAGTGGGATATCAAAG+TGG 0.640983 4.3:-26745536 MS.gene053505:CDS
ATATTTGTTTGGCAGGTGGG+AGG 0.645744 4.3:-26745555 MS.gene053505:intron
TCTGCATTATTCTTTCACCA+AGG 0.653614 4.3:-26747589 MS.gene053505:CDS
CTTGTGGGTAGACCTTGCTG+AGG 0.655922 4.3:+26745488 None:intergenic
TATGTGATACCAATGATGGA+GGG 0.670681 4.3:-26746404 MS.gene053505:CDS
GGTCAAAATTATGAGGAGCA+GGG 0.673511 4.3:+26745928 None:intergenic
CCATTCCCAATCCCTCAGCA+AGG 0.677459 4.3:-26745500 MS.gene053505:CDS
TGATGGATGTTTCTGAACAG+TGG 0.679204 4.3:+26745966 None:intergenic
CCAAGTTACCAAAGACAGAG+AGG 0.687120 4.3:+26747053 None:intergenic
ATTGTCTAAATTAGGCGAGG+CGG 0.689320 4.3:-26746793 MS.gene053505:intron
GGGAAGATTCCATTGACATG+GGG 0.697651 4.3:-26746384 MS.gene053505:CDS
TGTGATGTTAACAAGTCCCG+AGG 0.744003 4.3:-26747692 None:intergenic
GTGGTTGATGTGGTATACAA+GGG 0.754107 4.3:-26746136 MS.gene053505:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTTATATAT+AGG - chr4.3:26745870-26745889 MS.gene053505:intron 0.0%
!! AATTTAAATTTACCTAAATT+TGG + chr4.3:26747498-26747517 None:intergenic 10.0%
!!! TTTTTTTTTATATATAGGAT+CGG - chr4.3:26745875-26745894 MS.gene053505:intron 10.0%
!! AATATAACTTGACTAAAAAT+TGG - chr4.3:26746337-26746356 MS.gene053505:intron 15.0%
!! ATATATATACATATATGACT+AGG + chr4.3:26747311-26747330 None:intergenic 15.0%
!! ATTGCATTATGAATAAAATA+TGG + chr4.3:26747549-26747568 None:intergenic 15.0%
!! TACGATATATAAACATATAA+AGG - chr4.3:26745904-26745923 MS.gene053505:intron 15.0%
!! TATTTATGCTTATGAATATA+TGG - chr4.3:26747349-26747368 MS.gene053505:intron 15.0%
!! TCAACAAAAATTTATGTATT+TGG + chr4.3:26745841-26745860 None:intergenic 15.0%
!!! TTAATCTTTTGTACATTTAT+AGG - chr4.3:26747061-26747080 MS.gene053505:CDS 15.0%
!! GATGAAATATATTGTCTTAT+TGG - chr4.3:26745947-26745966 MS.gene053505:CDS 20.0%
!! TAAAATCAACATGTTCAATT+TGG + chr4.3:26747459-26747478 None:intergenic 20.0%
!! TAATAAACTGTACATATTAC+AGG - chr4.3:26746715-26746734 MS.gene053505:CDS 20.0%
!! TTGGTTAAATTGTCTAAATT+AGG - chr4.3:26746356-26746375 MS.gene053505:CDS 20.0%
!!! AATATTGATTTTCAAAACTG+AGG + chr4.3:26746675-26746694 None:intergenic 20.0%
!!! ATATTGATTTTCAAAACTGA+GGG + chr4.3:26746674-26746693 None:intergenic 20.0%
!!! ATCAATTTCTTAATTGATTC+AGG + chr4.3:26745640-26745659 None:intergenic 20.0%
!!! TGAATTTTGTTTTCATTTGT+CGG - chr4.3:26745988-26746007 MS.gene053505:CDS 20.0%
! AAAAGCAAAGAAAAGCTTAT+TGG - chr4.3:26745541-26745560 MS.gene053505:CDS 25.0%
! AATCATGAATTTATTGTCAC+TGG - chr4.3:26746015-26746034 MS.gene053505:intron 25.0%
! ATCATCTAGTAACCAAATTT+AGG - chr4.3:26747483-26747502 MS.gene053505:CDS 25.0%
! CAAGGATATTTAATACCAAA+GGG - chr4.3:26747155-26747174 MS.gene053505:intron 25.0%
! GTGACAATAAATTCATGATT+AGG + chr4.3:26746015-26746034 None:intergenic 25.0%
! TAAACTACAAGGATGAAAAA+GGG - chr4.3:26746469-26746488 MS.gene053505:intron 25.0%
! TAAATTTGGTTACTAGATGA+TGG + chr4.3:26747484-26747503 None:intergenic 25.0%
! TATATACATATATGACTAGG+TGG + chr4.3:26747308-26747327 None:intergenic 25.0%
! TCAAGGATATTTAATACCAA+AGG - chr4.3:26747154-26747173 MS.gene053505:intron 25.0%
! TTGTATTGTGTAGGTAATAT+TGG - chr4.3:26746951-26746970 MS.gene053505:CDS 25.0%
!! AATAAGCTTTTCTTTGCTTT+TGG + chr4.3:26745542-26745561 None:intergenic 25.0%
!! ATGACTTCATTTTCAATATC+AGG + chr4.3:26745664-26745683 None:intergenic 25.0%
!! CTTATGAATATATGGATTGA+TGG - chr4.3:26747357-26747376 MS.gene053505:intron 25.0%
!! GTAAATAACTTGTATTGTGT+AGG - chr4.3:26746942-26746961 MS.gene053505:intron 25.0%
!! TGACTTCATTTTCAATATCA+GGG + chr4.3:26745663-26745682 None:intergenic 25.0%
!!! AACAAACCTTTTTCATTTCA+TGG + chr4.3:26745735-26745754 None:intergenic 25.0%
!!! ATAAGCTTTTCTTTGCTTTT+GGG + chr4.3:26745541-26745560 None:intergenic 25.0%
!!! GACAAAAACTCTTACTTTTA+TGG + chr4.3:26746622-26746641 None:intergenic 25.0%
!!! TTTTTTATATATAGGATCGG+AGG - chr4.3:26745878-26745897 MS.gene053505:intron 25.0%
AATTACTGCATAGTAGAGAA+AGG - chr4.3:26746156-26746175 MS.gene053505:CDS 30.0%
AGGGAAAATGTTAACTGATA+AGG - chr4.3:26746488-26746507 MS.gene053505:intron 30.0%
AGTATACCTCAAATCTTGAT+GGG + chr4.3:26747253-26747272 None:intergenic 30.0%
ATGGATTTCCTATTCCTTAT+TGG - chr4.3:26746648-26746667 MS.gene053505:CDS 30.0%
CAATTATAGAGAACAGCTTA+AGG - chr4.3:26746131-26746150 MS.gene053505:intron 30.0%
CATCATATCATTCACGTTTA+GGG - chr4.3:26746993-26747012 MS.gene053505:CDS 30.0%
CTAAACTACAAGGATGAAAA+AGG - chr4.3:26746468-26746487 MS.gene053505:intron 30.0%
CTTAAGCTGTTCTCTATAAT+TGG + chr4.3:26746133-26746152 None:intergenic 30.0%
GATATTTAATACCAAAGGGT+TGG - chr4.3:26747159-26747178 MS.gene053505:intron 30.0%
GGTTGTGTTCAATATTTGTT+TGG - chr4.3:26747591-26747610 MS.gene053505:CDS 30.0%
TAAATTGTCTAAATTAGGCG+AGG - chr4.3:26746361-26746380 MS.gene053505:CDS 30.0%
TACTATATACTATGCATGCA+TGG - chr4.3:26746846-26746865 MS.gene053505:intron 30.0%
TAGTATACCTCAAATCTTGA+TGG + chr4.3:26747254-26747273 None:intergenic 30.0%
TTGAATGAGAAGGATCTATT+AGG - chr4.3:26746438-26746457 MS.gene053505:intron 30.0%
TTGATTCTCCAAAATCTTGT+GGG + chr4.3:26747687-26747706 None:intergenic 30.0%
TTTGATTCTCCAAAATCTTG+TGG + chr4.3:26747688-26747707 None:intergenic 30.0%
! AAATATGCCACTTACTCATA+AGG - chr4.3:26746805-26746824 MS.gene053505:intron 30.0%
! AAGAGTTTTTGTCTCTATCA+TGG - chr4.3:26746629-26746648 MS.gene053505:CDS 30.0%
! ACAAGGGTAAGAATTTTAGA+CGG - chr4.3:26747037-26747056 MS.gene053505:CDS 30.0%
! TGAGATAATTTGCAAGAGAA+AGG - chr4.3:26746407-26746426 MS.gene053505:CDS 30.0%
!! CCAAATGGCATAAAAGTATT+GGG + chr4.3:26747401-26747420 None:intergenic 30.0%
!! GTTTGGTTTGGTTTGATTAT+TGG - chr4.3:26746058-26746077 MS.gene053505:intron 30.0%
AGGTAATATTGGAAAGCCTA+AGG - chr4.3:26746962-26746981 MS.gene053505:CDS 35.0%
ATACATATATGACTAGGTGG+TGG + chr4.3:26747305-26747324 None:intergenic 35.0%
ATATGATGCTTGACATCCTT+AGG + chr4.3:26746981-26747000 None:intergenic 35.0%
CAAACCAATAATGAAGGAGA+AGG + chr4.3:26746043-26746062 None:intergenic 35.0%
CATCCTTGTAGTTTAGCAAA+TGG + chr4.3:26746464-26746483 None:intergenic 35.0%
CCAAACCAAACCAATAATGA+AGG + chr4.3:26746049-26746068 None:intergenic 35.0%
CGCTTTCCATGAAATGAAAA+AGG - chr4.3:26745726-26745745 MS.gene053505:CDS 35.0%
GCATCATATCATTCACGTTT+AGG - chr4.3:26746992-26747011 MS.gene053505:CDS 35.0%
GGTAGAATTCTGGATTATGA+TGG + chr4.3:26747211-26747230 None:intergenic 35.0%
GTGTTCAATATTTGTTTGGC+AGG - chr4.3:26747595-26747614 MS.gene053505:CDS 35.0%
GTTCTTTGATGCAACTATCA+AGG - chr4.3:26747137-26747156 MS.gene053505:intron 35.0%
TACCATACCTTATGAGTAAG+TGG + chr4.3:26746815-26746834 None:intergenic 35.0%
TCAATATTTGTTTGGCAGGT+GGG - chr4.3:26747599-26747618 MS.gene053505:CDS 35.0%
TCTGCATTATTCTTTCACCA+AGG - chr4.3:26745568-26745587 MS.gene053505:intron 35.0%
TCTTTCCCAAATAAGATACC+CGG - chr4.3:26746186-26746205 MS.gene053505:CDS 35.0%
TTATGGCTTCAAGAAGTTTC+TGG + chr4.3:26746605-26746624 None:intergenic 35.0%
TTCAATATTTGTTTGGCAGG+TGG - chr4.3:26747598-26747617 MS.gene053505:CDS 35.0%
! ATCATACTCCAAAGCTCTTT+TGG - chr4.3:26746212-26746231 MS.gene053505:intron 35.0%
! CCCAATACTTTTATGCCATT+TGG - chr4.3:26747398-26747417 MS.gene053505:intron 35.0%
! CTAGAATCCTGGGTTTTTAT+TGG - chr4.3:26745691-26745710 MS.gene053505:CDS 35.0%
! CTTCTCCTTCATTATTGGTT+TGG - chr4.3:26746041-26746060 MS.gene053505:intron 35.0%
! CTTGATGGGTCAAAATTATG+AGG + chr4.3:26747239-26747258 None:intergenic 35.0%
! GAAGTTGCTGATAATGTCAT+TGG - chr4.3:26746510-26746529 MS.gene053505:intron 35.0%
! GCCAAATGGCATAAAAGTAT+TGG + chr4.3:26747402-26747421 None:intergenic 35.0%
! TATGTGATACCAATGATGGA+GGG - chr4.3:26746753-26746772 MS.gene053505:CDS 35.0%
! TTTTGACCCATCAAGATTTG+AGG - chr4.3:26747244-26747263 MS.gene053505:intron 35.0%
!! ACTTTTATGCCATTTGGCAA+TGG - chr4.3:26747404-26747423 MS.gene053505:intron 35.0%
!! CCTTCATTATTGGTTTGGTT+TGG - chr4.3:26746046-26746065 MS.gene053505:intron 35.0%
!!! TCTTTGCTTTTGGGATATGT+AGG + chr4.3:26745532-26745551 None:intergenic 35.0%
AAAAACCCAGGATTCTAGTG+AGG + chr4.3:26745689-26745708 None:intergenic 40.0%
AGGGAAGATTCCATTGACAT+GGG - chr4.3:26746772-26746791 MS.gene053505:CDS 40.0%
ATTGTCTAAATTAGGCGAGG+CGG - chr4.3:26746364-26746383 MS.gene053505:CDS 40.0%
CATATTACAGGCTGAGCAAA+TGG - chr4.3:26746727-26746746 MS.gene053505:CDS 40.0%
CATTTCCTCACTAGAATCCT+GGG - chr4.3:26745681-26745700 MS.gene053505:CDS 40.0%
CTACAGCTAGTGTTCTTACT+TGG - chr4.3:26746556-26746575 MS.gene053505:CDS 40.0%
GAAGCTTACCAAAAGAGCTT+TGG + chr4.3:26746223-26746242 None:intergenic 40.0%
GACTTGTCCAATAAAAACCC+AGG + chr4.3:26745701-26745720 None:intergenic 40.0%
GCAGTATGTGATACCAATGA+TGG - chr4.3:26746749-26746768 MS.gene053505:CDS 40.0%
GGTCAAAATTATGAGGAGCA+GGG + chr4.3:26747232-26747251 None:intergenic 40.0%
GGTTCCTTCTCCTTCATTAT+TGG - chr4.3:26746036-26746055 MS.gene053505:intron 40.0%
GTATGTGATACCAATGATGG+AGG - chr4.3:26746752-26746771 MS.gene053505:CDS 40.0%
TCATTTCCTCACTAGAATCC+TGG - chr4.3:26745680-26745699 MS.gene053505:CDS 40.0%
TCGATCACTAACTGCAATTG+CGG - chr4.3:26746291-26746310 MS.gene053505:intron 40.0%
TGGCAGTTCTCTTTCAATGT+CGG - chr4.3:26746078-26746097 MS.gene053505:intron 40.0%
TTCAAAACTGAGGGCCAATA+AGG + chr4.3:26746665-26746684 None:intergenic 40.0%
TTTATCTGACCCCATGTCAA+TGG + chr4.3:26746785-26746804 None:intergenic 40.0%
! AAGGTCTACCCACAAGATTT+TGG - chr4.3:26747676-26747695 MS.gene053505:CDS 40.0%
! AATTTGGCTAGCTCATTTCC+TGG + chr4.3:26747443-26747462 None:intergenic 40.0%
! AGGCCATTTGCTAAACTACA+AGG - chr4.3:26746458-26746477 MS.gene053505:intron 40.0%
! ATGCTCCGGGTATCTTATTT+GGG + chr4.3:26746194-26746213 None:intergenic 40.0%
! CTTCAATGCAGTGCAACTTT+TGG - chr4.3:26746239-26746258 MS.gene053505:intron 40.0%
! GTGGTTGATGTGGTATACAA+GGG - chr4.3:26747021-26747040 MS.gene053505:CDS 40.0%
! TCAAGATCAGAGTGCTCATT+TGG - chr4.3:26747570-26747589 MS.gene053505:CDS 40.0%
! TGATGGATGTTTCTGAACAG+TGG + chr4.3:26747194-26747213 None:intergenic 40.0%
! TGCCACTTACTCATAAGGTA+TGG - chr4.3:26746810-26746829 MS.gene053505:intron 40.0%
! TGTGGTTGATGTGGTATACA+AGG - chr4.3:26747020-26747039 MS.gene053505:CDS 40.0%
!! GGCATAAAAGTATTGGGCTT+TGG + chr4.3:26747395-26747414 None:intergenic 40.0%
AACACAAATCTTGCAGCCTC+GGG + chr4.3:26745484-26745503 None:intergenic 45.0%
ACTGAGGGCCAATAAGGAAT+AGG + chr4.3:26746659-26746678 None:intergenic 45.0%
ATATTTGTTTGGCAGGTGGG+AGG - chr4.3:26747602-26747621 MS.gene053505:CDS 45.0%
ATTCACGTTTAGGGAAGCTG+TGG - chr4.3:26747002-26747021 MS.gene053505:CDS 45.0%
CAACACAAATCTTGCAGCCT+CGG + chr4.3:26745485-26745504 None:intergenic 45.0%
CCAAGTTACCAAAGACAGAG+AGG + chr4.3:26746107-26746126 None:intergenic 45.0%
GAGGGAAGATTCCATTGACA+TGG - chr4.3:26746771-26746790 MS.gene053505:CDS 45.0%
GATGCTCCGGGTATCTTATT+TGG + chr4.3:26746195-26746214 None:intergenic 45.0%
GGAGCAGAGATTGAATGAGA+AGG - chr4.3:26746428-26746447 MS.gene053505:intron 45.0%
GGCAGTTCTCTTTCAATGTC+GGG - chr4.3:26746079-26746098 MS.gene053505:intron 45.0%
GGCATTACTTTCCAACCCTT+TGG + chr4.3:26747173-26747192 None:intergenic 45.0%
GGGAAGATTCCATTGACATG+GGG - chr4.3:26746773-26746792 MS.gene053505:CDS 45.0%
GGGTCAAAATTATGAGGAGC+AGG + chr4.3:26747233-26747252 None:intergenic 45.0%
TGGAATCTTCCCTCCATCAT+TGG + chr4.3:26746765-26746784 None:intergenic 45.0%
! CCTCTCTGTCTTTGGTAACT+TGG - chr4.3:26746104-26746123 MS.gene053505:intron 45.0%
!! AGCTTTGGAGTATGATGCTC+CGG + chr4.3:26746208-26746227 None:intergenic 45.0%
!! GAGGTAGTGGGATATCAAAG+TGG - chr4.3:26747621-26747640 MS.gene053505:CDS 45.0%
!! GGATTGGGAATGGGCTATAT+TGG + chr4.3:26747650-26747669 None:intergenic 45.0%
AATGGAGTGCACTCATGTCC+AGG - chr4.3:26747422-26747441 MS.gene053505:intron 50.0%
CGAGGCTGCAAGATTTGTGT+TGG - chr4.3:26745483-26745502 MS.gene053505:CDS 50.0%
CTTGCTGAGGGATTGGGAAT+GGG + chr4.3:26747659-26747678 None:intergenic 50.0%
GAGATTACCACACTCGCATC+AGG - chr4.3:26745590-26745609 MS.gene053505:intron 50.0%
GAGTGCACTCCATTGCCAAA+TGG + chr4.3:26747416-26747435 None:intergenic 50.0%
GTAGACCTTGCTGAGGGATT+GGG + chr4.3:26747665-26747684 None:intergenic 50.0%
TGAGGAGCAGGGTAGAATTC+TGG + chr4.3:26747221-26747240 None:intergenic 50.0%
TGCGAGTGTGGTAATCTCCT+TGG + chr4.3:26745588-26745607 None:intergenic 50.0%
TTGTGGGTAGACCTTGCTGA+GGG + chr4.3:26747671-26747690 None:intergenic 50.0%
! TAGGGAAGCTGTGGTTGATG+TGG - chr4.3:26747011-26747030 MS.gene053505:CDS 50.0%
!! GCTTTGGAGTATGATGCTCC+GGG + chr4.3:26746207-26746226 None:intergenic 50.0%
CCATTCCCAATCCCTCAGCA+AGG - chr4.3:26747657-26747676 MS.gene053505:CDS 55.0%
CCTTGCTGAGGGATTGGGAA+TGG + chr4.3:26747660-26747679 None:intergenic 55.0%
CGAGTTTCCTGATGCGAGTG+TGG + chr4.3:26745600-26745619 None:intergenic 55.0%
CTTGTGGGTAGACCTTGCTG+AGG + chr4.3:26747672-26747691 None:intergenic 55.0%
GGTAGACCTTGCTGAGGGAT+TGG + chr4.3:26747666-26747685 None:intergenic 55.0%
GTCGGGATCCTCTCTGTCTT+TGG - chr4.3:26746096-26746115 MS.gene053505:intron 55.0%
TTTGGCAGGTGGGAGGTAGT+GGG - chr4.3:26747609-26747628 MS.gene053505:CDS 55.0%
GTTTGGCAGGTGGGAGGTAG+TGG - chr4.3:26747608-26747627 MS.gene053505:CDS 60.0%


Chromosome Type Strat End Strand Name
chr4.3 gene 26745469 26747710 26745469 ID=MS.gene053505
chr4.3 mRNA 26745469 26747710 26745469 ID=MS.gene053505.t1;Parent=MS.gene053505
chr4.3 exon 26747432 26747710 26747432 ID=MS.gene053505.t1.exon1;Parent=MS.gene053505.t1
chr4.3 CDS 26747432 26747710 26747432 ID=cds.MS.gene053505.t1;Parent=MS.gene053505.t1
chr4.3 exon 26746946 26747095 26746946 ID=MS.gene053505.t1.exon2;Parent=MS.gene053505.t1
chr4.3 CDS 26746946 26747095 26746946 ID=cds.MS.gene053505.t1;Parent=MS.gene053505.t1
chr4.3 exon 26746553 26746801 26746553 ID=MS.gene053505.t1.exon3;Parent=MS.gene053505.t1
chr4.3 CDS 26746553 26746801 26746553 ID=cds.MS.gene053505.t1;Parent=MS.gene053505.t1
chr4.3 exon 26746353 26746442 26746353 ID=MS.gene053505.t1.exon4;Parent=MS.gene053505.t1
chr4.3 CDS 26746353 26746442 26746353 ID=cds.MS.gene053505.t1;Parent=MS.gene053505.t1
chr4.3 exon 26746137 26746215 26746137 ID=MS.gene053505.t1.exon5;Parent=MS.gene053505.t1
chr4.3 CDS 26746137 26746215 26746137 ID=cds.MS.gene053505.t1;Parent=MS.gene053505.t1
chr4.3 exon 26745914 26746020 26745914 ID=MS.gene053505.t1.exon6;Parent=MS.gene053505.t1
chr4.3 CDS 26745914 26746020 26745914 ID=cds.MS.gene053505.t1;Parent=MS.gene053505.t1
chr4.3 exon 26745675 26745793 26745675 ID=MS.gene053505.t1.exon7;Parent=MS.gene053505.t1
chr4.3 CDS 26745675 26745793 26745675 ID=cds.MS.gene053505.t1;Parent=MS.gene053505.t1
chr4.3 exon 26745469 26745562 26745469 ID=MS.gene053505.t1.exon8;Parent=MS.gene053505.t1
chr4.3 CDS 26745469 26745562 26745469 ID=cds.MS.gene053505.t1;Parent=MS.gene053505.t1
Gene Sequence

>MS.gene053505

ATGTTAACAAGTCCCGAGGCTGCAAGATTTGTGTTGGTGACTCATTCTCATTTGTTTAAGCCTACATATCCCAAAAGCAAAGAAAAGCTTATTGGTTCTTCTGCATTATTCTTTCACCAAGGAGATTACCACACTCGCATCAGGAAACTCGTTCAAAACTCTCTTGCTCCTGAATCAATTAAGAAATTGATCCCTGATATTGAAAATGAAGTCATTTCCTCACTAGAATCCTGGGTTTTTATTGGACAAGTCATCAACGCTTTCCATGAAATGAAAAAGGTTTGTTTTGAAATTAAATTAATATAATAAAAGAATTATCTTGACAAATTTAAATCAACAAAAGTTGATGTATTATGACAAAATTTTAGACCAAATACATAAATTTTTGTTGATTTAATTTTTTTTTTTTTTTTTTATATATAGGATCGGAGGTAGTACGATATATAAACATATAAAGGTTATATTTTCTAGAAGCAACGATGAAATATATTGTCTTATTGGATACTGTTTGAATAGCGTTGAATTTTGTTTTCATTTGTCGGTCCTAATCATGAATTTATTGTCACTGGTTCCTTCTCCTTCATTATTGGTTTGGTTTGGTTTGATTATTGGCAGTTCTCTTTCAATGTCGGGATCCTCTCTGTCTTTGGTAACTTGGAAGCCAATTATAGAGAACAGCTTAAGGAGAATTACTGCATAGTAGAGAAAGGTTACAATTCTTTCCCAAATAAGATACCCGGAGCATCATACTCCAAAGCTCTTTTGGTAAGCTTCAATGCAGTGCAACTTTTGGTTTATACATGATTTTAGTAGTTCTAAATTTCGATCACTAACTGCAATTGCGGTTGCAATATAAAAGTTTTATAATAATATAACTTGACTAAAAATTGGTTAAATTGTCTAAATTAGGCGAGGCGGCGAATTCAAGAGATTATAAGTGAGATAATTTGCAAGAGAAAGGAGCAGAGATTGAATGAGAAGGATCTATTAGGCCATTTGCTAAACTACAAGGATGAAAAAGGGAAAATGTTAACTGATAAGGAAGTTGCTGATAATGTCATTGGAGTACTATTTGCAGCTCAAGATACTACAGCTAGTGTTCTTACTTGGATTCTAAAGTATCTTCATGATGACCAGAAACTTCTTGAAGCCATAAAAGTAAGAGTTTTTGTCTCTATCATGGATTTCCTATTCCTTATTGGCCCTCAGTTTTGAAAATCAATATTAATGTATGAGTCAAATCATATAATAAACTGTACATATTACAGGCTGAGCAAATGGCAGTATGTGATACCAATGATGGAGGGAAGATTCCATTGACATGGGGTCAGATAAAAAATATGCCACTTACTCATAAGGTATGGTATATTAAATATATACTATATACTATGCATGCATGGTAAATGCTATGCAAAAAAAAAATACTTCTTTTAATTTGAATGCAGCATTGCAGCTTCATGAATACATTAAGTAGTAAATAACTTGTATTGTGTAGGTAATATTGGAAAGCCTAAGGATGTCAAGCATCATATCATTCACGTTTAGGGAAGCTGTGGTTGATGTGGTATACAAGGGTAAGAATTTTAGACGGATTAATCTTTTGTACATTTATAGGAAATTTCATTTTCAAAAGCTATTACTATTTATTTCATGATTAATTTCTCAAATGTTCTTTGATGCAACTATCAAGGATATTTAATACCAAAGGGTTGGAAAGTAATGCCACTGTTCAGAAACATCCATCATAATCCAGAATTCTACCCTGCTCCTCATAATTTTGACCCATCAAGATTTGAGGTATACTATCGCTATGCTTGACATTAACGACTTTGTCCACCACCTAGTCATATATGTATATATATATATATAAAAAAAAAAATTATTTATGCTTATGAATATATGGATTGATGGTTGCAGTTTGCTCCAAAGCCCAATACTTTTATGCCATTTGGCAATGGAGTGCACTCATGTCCAGGAAATGAGCTAGCCAAATTGAACATGTTGATTTTAATCCATCATCTAGTAACCAAATTTAGGTAAATTTAAATTTTGACTTCATTTTGTCAATTTTTTTCTTCCATATTTTATTCATAATGCAATATCAAGATCAGAGTGCTCATTTGGTTGTGTTCAATATTTGTTTGGCAGGTGGGAGGTAGTGGGATATCAAAGTGGAATCCAATATAGCCCATTCCCAATCCCTCAGCAAGGTCTACCCACAAGATTTTGGAGAATCAAATAG

Protein sequence

>MS.gene053505.t1

MLTSPEAARFVLVTHSHLFKPTYPKSKEKLIGSSALFFHQGDYHTRIRKLVQNSLAPESIKKLIPDIENEVISSLESWVFIGQVINAFHEMKKFSFNVGILSVFGNLEANYREQLKENYCIVEKGYNSFPNKIPGASYSKALLARRRIQEIISEIICKRKEQRLNEKDLLGHLLNYKDEKGKMLTDKEVADNVIGVLFAAQDTTASVLTWILKYLHDDQKLLEAIKAEQMAVCDTNDGGKIPLTWGQIKNMPLTHKVILESLRMSSIISFTFREAVVDVVYKGYLIPKGWKVMPLFRNIHHNPEFYPAPHNFDPSRFEFAPKPNTFMPFGNGVHSCPGNELAKLNMLILIHHLVTKFRWEVVGYQSGIQYSPFPIPQQGLPTRFWRIK