Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27771.t1 | XP_013449296.1 | 97.9 | 334 | 7 | 0 | 1 | 334 | 1 | 334 | 2.90E-181 | 644.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27771.t1 | O49658 | 58.6 | 268 | 91 | 7 | 6 | 255 | 13 | 278 | 2.8e-68 | 260.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27771.t1 | A0A072U297 | 97.9 | 334 | 7 | 0 | 1 | 334 | 1 | 334 | 2.1e-181 | 644.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049298 | MS.gene27771 | 0.84779 | 9.25E-60 | -1.69E-46 |
MS.gene050225 | MS.gene27771 | 0.829235 | 5.77E-55 | -1.69E-46 |
MS.gene051317 | MS.gene27771 | -0.803619 | 3.20E-49 | -1.69E-46 |
MS.gene051838 | MS.gene27771 | -0.803496 | 3.39E-49 | -1.69E-46 |
MS.gene051914 | MS.gene27771 | 0.807995 | 3.85E-50 | -1.69E-46 |
MS.gene053108 | MS.gene27771 | 0.862044 | 6.69E-64 | -1.69E-46 |
MS.gene053348 | MS.gene27771 | 0.808573 | 2.90E-50 | -1.69E-46 |
MS.gene054941 | MS.gene27771 | 0.828344 | 9.47E-55 | -1.69E-46 |
MS.gene056387 | MS.gene27771 | -0.825838 | 3.77E-54 | -1.69E-46 |
MS.gene05652 | MS.gene27771 | 0.823148 | 1.62E-53 | -1.69E-46 |
MS.gene056618 | MS.gene27771 | 0.915476 | 5.63E-85 | -1.69E-46 |
MS.gene057101 | MS.gene27771 | 0.83804 | 3.64E-57 | -1.69E-46 |
MS.gene057367 | MS.gene27771 | 0.823975 | 1.04E-53 | -1.69E-46 |
MS.gene058128 | MS.gene27771 | 0.839873 | 1.22E-57 | -1.69E-46 |
MS.gene058853 | MS.gene27771 | 0.807406 | 5.13E-50 | -1.69E-46 |
MS.gene05960 | MS.gene27771 | 0.806575 | 7.69E-50 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27771.t1 | MTR_7g074935 | 97.904 | 334 | 7 | 0 | 1 | 334 | 1 | 334 | 0.0 | 667 |
MS.gene27771.t1 | MTR_8g036160 | 69.916 | 359 | 81 | 8 | 1 | 334 | 1 | 357 | 1.20e-151 | 430 |
MS.gene27771.t1 | MTR_4g101990 | 54.701 | 351 | 119 | 11 | 1 | 332 | 1 | 330 | 6.51e-78 | 241 |
MS.gene27771.t1 | MTR_1g076710 | 48.214 | 336 | 127 | 11 | 1 | 315 | 1 | 310 | 4.28e-77 | 240 |
MS.gene27771.t1 | MTR_1g061530 | 42.581 | 310 | 129 | 10 | 60 | 333 | 65 | 361 | 3.10e-64 | 207 |
MS.gene27771.t1 | MTR_6g061670 | 45.788 | 273 | 123 | 5 | 1 | 263 | 1 | 258 | 4.48e-58 | 190 |
MS.gene27771.t1 | MTR_6g061670 | 45.390 | 282 | 116 | 8 | 1 | 263 | 1 | 263 | 2.83e-57 | 188 |
MS.gene27771.t1 | MTR_5g011680 | 43.682 | 277 | 109 | 9 | 15 | 253 | 4 | 271 | 6.71e-54 | 179 |
MS.gene27771.t1 | MTR_5g010330 | 45.175 | 228 | 112 | 5 | 58 | 278 | 68 | 289 | 1.21e-52 | 176 |
MS.gene27771.t1 | MTR_8g031100 | 47.137 | 227 | 111 | 2 | 60 | 278 | 89 | 314 | 3.11e-52 | 176 |
MS.gene27771.t1 | MTR_8g098390 | 45.455 | 231 | 109 | 5 | 59 | 278 | 96 | 320 | 2.64e-49 | 168 |
MS.gene27771.t1 | MTR_7g077120 | 45.022 | 231 | 119 | 2 | 56 | 278 | 85 | 315 | 7.44e-49 | 167 |
MS.gene27771.t1 | MTR_5g011620 | 45.255 | 274 | 124 | 10 | 15 | 280 | 4 | 259 | 1.79e-48 | 173 |
MS.gene27771.t1 | MTR_4g098460 | 53.103 | 145 | 61 | 2 | 99 | 243 | 59 | 196 | 7.60e-40 | 142 |
MS.gene27771.t1 | MTR_5g011610 | 54.088 | 159 | 62 | 5 | 124 | 280 | 53 | 202 | 1.23e-39 | 142 |
MS.gene27771.t1 | MTR_5g011610 | 54.369 | 103 | 44 | 1 | 119 | 221 | 204 | 303 | 5.97e-26 | 105 |
MS.gene27771.t1 | MTR_1g038960 | 43.810 | 210 | 105 | 7 | 38 | 242 | 62 | 263 | 1.61e-37 | 137 |
MS.gene27771.t1 | MTR_4g098460 | 51.333 | 150 | 61 | 3 | 99 | 243 | 59 | 201 | 1.89e-37 | 135 |
MS.gene27771.t1 | MTR_4g055803 | 41.748 | 206 | 113 | 5 | 51 | 251 | 51 | 254 | 3.24e-37 | 138 |
MS.gene27771.t1 | MTR_1g079780 | 40.260 | 231 | 131 | 5 | 60 | 287 | 43 | 269 | 5.12e-36 | 133 |
MS.gene27771.t1 | MTR_4g055833 | 40.284 | 211 | 119 | 5 | 46 | 251 | 43 | 251 | 1.01e-35 | 132 |
MS.gene27771.t1 | MTR_7g116320 | 44.792 | 192 | 101 | 3 | 60 | 249 | 74 | 262 | 1.19e-34 | 130 |
MS.gene27771.t1 | MTR_4g055813 | 49.265 | 136 | 64 | 3 | 119 | 251 | 11 | 144 | 2.34e-33 | 125 |
MS.gene27771.t1 | MTR_6g060670 | 42.574 | 202 | 99 | 7 | 60 | 260 | 120 | 305 | 4.69e-33 | 124 |
MS.gene27771.t1 | MTR_5g014360 | 45.026 | 191 | 84 | 7 | 63 | 242 | 123 | 303 | 5.46e-32 | 123 |
MS.gene27771.t1 | MTR_7g116320 | 44.505 | 182 | 96 | 3 | 60 | 239 | 74 | 252 | 1.27e-31 | 120 |
MS.gene27771.t1 | MTR_5g013390 | 38.073 | 218 | 116 | 9 | 57 | 262 | 78 | 288 | 9.92e-30 | 116 |
MS.gene27771.t1 | MTR_1g038990 | 39.572 | 187 | 90 | 6 | 57 | 242 | 79 | 243 | 1.18e-27 | 110 |
MS.gene27771.t1 | MTR_4g055705 | 32.099 | 243 | 130 | 6 | 27 | 241 | 19 | 254 | 2.13e-25 | 103 |
MS.gene27771.t1 | MTR_5g041430 | 37.838 | 185 | 99 | 7 | 59 | 238 | 49 | 222 | 6.96e-24 | 100 |
MS.gene27771.t1 | MTR_3g023560 | 42.975 | 121 | 63 | 2 | 125 | 242 | 60 | 177 | 7.29e-23 | 96.3 |
MS.gene27771.t1 | MTR_3g100470 | 40.000 | 115 | 68 | 1 | 129 | 242 | 103 | 217 | 1.53e-21 | 93.2 |
MS.gene27771.t1 | MTR_3g116100 | 35.484 | 186 | 106 | 5 | 107 | 289 | 130 | 304 | 3.39e-20 | 90.1 |
MS.gene27771.t1 | MTR_3g068035 | 43.363 | 113 | 61 | 1 | 130 | 242 | 109 | 218 | 4.41e-20 | 89.4 |
MS.gene27771.t1 | MTR_5g066020 | 40.517 | 116 | 65 | 3 | 129 | 242 | 82 | 195 | 7.52e-20 | 87.8 |
MS.gene27771.t1 | MTR_5g011700 | 47.170 | 106 | 52 | 2 | 138 | 242 | 10 | 112 | 9.55e-19 | 83.2 |
MS.gene27771.t1 | MTR_5g091630 | 32.995 | 197 | 89 | 3 | 47 | 243 | 34 | 187 | 7.54e-18 | 82.0 |
MS.gene27771.t1 | MTR_8g036060 | 46.903 | 113 | 57 | 1 | 130 | 242 | 116 | 225 | 4.15e-17 | 80.9 |
MS.gene27771.t1 | MTR_4g098450 | 45.614 | 114 | 57 | 2 | 130 | 242 | 106 | 215 | 4.60e-17 | 80.5 |
MS.gene27771.t1 | MTR_7g080980 | 52.239 | 67 | 32 | 0 | 130 | 196 | 87 | 153 | 6.02e-17 | 79.7 |
MS.gene27771.t1 | MTR_1g073860 | 43.363 | 113 | 61 | 1 | 130 | 242 | 124 | 233 | 2.47e-16 | 79.0 |
MS.gene27771.t1 | MTR_5g011520 | 43.363 | 113 | 61 | 1 | 130 | 242 | 130 | 239 | 2.64e-16 | 79.0 |
MS.gene27771.t1 | MTR_1g044155 | 41.593 | 113 | 63 | 1 | 130 | 242 | 156 | 265 | 2.95e-16 | 79.0 |
MS.gene27771.t1 | MTR_1g079810 | 44.248 | 113 | 60 | 1 | 130 | 242 | 104 | 213 | 2.91e-15 | 75.5 |
MS.gene27771.t1 | MTR_5g011600 | 37.121 | 132 | 56 | 3 | 179 | 310 | 3 | 107 | 4.10e-14 | 68.6 |
MS.gene27771.t1 | MTR_5g080580 | 40.179 | 112 | 64 | 1 | 131 | 242 | 120 | 228 | 8.19e-14 | 71.6 |
MS.gene27771.t1 | MTR_5g011590 | 38.793 | 116 | 53 | 3 | 69 | 184 | 42 | 139 | 1.07e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene27771.t1 | AT4G12080 | 56.811 | 301 | 91 | 8 | 6 | 269 | 17 | 315 | 1.63e-96 | 290 |
MS.gene27771.t1 | AT4G22770 | 59.206 | 277 | 88 | 10 | 6 | 261 | 13 | 285 | 4.34e-79 | 245 |
MS.gene27771.t1 | AT4G22770 | 59.206 | 277 | 88 | 10 | 6 | 261 | 13 | 285 | 4.34e-79 | 245 |
MS.gene27771.t1 | AT4G25320 | 56.757 | 222 | 76 | 3 | 48 | 250 | 69 | 289 | 1.50e-76 | 241 |
MS.gene27771.t1 | AT4G00200 | 52.711 | 332 | 116 | 11 | 14 | 332 | 13 | 316 | 1.16e-75 | 235 |
MS.gene27771.t1 | AT4G00200 | 52.711 | 332 | 116 | 11 | 14 | 332 | 13 | 316 | 1.16e-75 | 235 |
MS.gene27771.t1 | AT5G62260 | 57.075 | 212 | 74 | 4 | 60 | 254 | 76 | 287 | 2.67e-69 | 222 |
MS.gene27771.t1 | AT5G62260 | 57.075 | 212 | 74 | 4 | 60 | 254 | 76 | 287 | 2.67e-69 | 222 |
MS.gene27771.t1 | AT5G51590 | 55.251 | 219 | 63 | 3 | 59 | 243 | 77 | 294 | 3.97e-67 | 217 |
MS.gene27771.t1 | AT5G62260 | 54.460 | 213 | 79 | 5 | 60 | 254 | 76 | 288 | 1.34e-64 | 206 |
MS.gene27771.t1 | AT2G33620 | 52.511 | 219 | 92 | 5 | 59 | 274 | 96 | 305 | 2.02e-64 | 207 |
MS.gene27771.t1 | AT2G33620 | 52.511 | 219 | 92 | 5 | 59 | 274 | 96 | 305 | 2.02e-64 | 207 |
MS.gene27771.t1 | AT2G33620 | 52.511 | 219 | 92 | 5 | 59 | 274 | 96 | 305 | 2.02e-64 | 207 |
MS.gene27771.t1 | AT2G33620 | 52.511 | 219 | 92 | 5 | 59 | 274 | 96 | 305 | 2.02e-64 | 207 |
MS.gene27771.t1 | AT2G45850 | 49.761 | 209 | 98 | 3 | 59 | 266 | 97 | 299 | 3.26e-53 | 179 |
MS.gene27771.t1 | AT2G45850 | 49.761 | 209 | 98 | 3 | 59 | 266 | 97 | 299 | 3.26e-53 | 179 |
MS.gene27771.t1 | AT1G63470 | 49.738 | 191 | 88 | 3 | 59 | 243 | 104 | 292 | 1.80e-51 | 175 |
MS.gene27771.t1 | AT3G61310 | 52.688 | 186 | 84 | 2 | 58 | 243 | 99 | 280 | 9.36e-51 | 172 |
MS.gene27771.t1 | AT4G17950 | 43.966 | 232 | 95 | 5 | 50 | 251 | 121 | 347 | 8.35e-50 | 172 |
MS.gene27771.t1 | AT2G45850 | 50.543 | 184 | 88 | 1 | 59 | 242 | 97 | 277 | 3.57e-49 | 166 |
MS.gene27771.t1 | AT5G46640 | 47.619 | 231 | 84 | 7 | 49 | 256 | 87 | 303 | 1.62e-46 | 162 |
MS.gene27771.t1 | AT1G63480 | 48.108 | 185 | 89 | 4 | 59 | 243 | 92 | 269 | 5.29e-45 | 157 |
MS.gene27771.t1 | AT1G63480 | 48.108 | 185 | 89 | 4 | 59 | 243 | 92 | 269 | 5.29e-45 | 157 |
MS.gene27771.t1 | AT1G63480 | 48.108 | 185 | 89 | 4 | 59 | 243 | 92 | 269 | 5.29e-45 | 157 |
MS.gene27771.t1 | AT1G63480 | 48.108 | 185 | 89 | 4 | 59 | 243 | 92 | 269 | 5.29e-45 | 157 |
MS.gene27771.t1 | AT1G63480 | 48.108 | 185 | 89 | 4 | 59 | 243 | 92 | 269 | 5.29e-45 | 157 |
MS.gene27771.t1 | AT1G63480 | 48.108 | 185 | 89 | 4 | 59 | 243 | 98 | 275 | 5.52e-45 | 157 |
MS.gene27771.t1 | AT1G63480 | 48.108 | 185 | 89 | 4 | 59 | 243 | 98 | 275 | 5.52e-45 | 157 |
MS.gene27771.t1 | AT3G04590 | 44.271 | 192 | 101 | 4 | 59 | 249 | 104 | 290 | 6.90e-39 | 140 |
MS.gene27771.t1 | AT3G04590 | 43.284 | 201 | 108 | 4 | 59 | 258 | 104 | 299 | 1.08e-37 | 139 |
MS.gene27771.t1 | AT2G36560 | 39.310 | 145 | 85 | 3 | 124 | 265 | 102 | 246 | 3.51e-24 | 103 |
MS.gene27771.t1 | AT5G49700 | 36.090 | 133 | 74 | 3 | 129 | 250 | 85 | 217 | 6.40e-20 | 88.6 |
MS.gene27771.t1 | AT3G60870 | 39.655 | 116 | 65 | 2 | 127 | 242 | 86 | 196 | 9.08e-20 | 87.8 |
MS.gene27771.t1 | AT1G14490 | 35.185 | 162 | 93 | 4 | 101 | 251 | 5 | 165 | 1.76e-19 | 85.5 |
MS.gene27771.t1 | AT1G14490 | 35.000 | 180 | 100 | 5 | 83 | 251 | 11 | 184 | 1.90e-19 | 85.9 |
MS.gene27771.t1 | AT3G55560 | 41.228 | 114 | 65 | 1 | 130 | 243 | 118 | 229 | 3.26e-17 | 81.3 |
MS.gene27771.t1 | AT5G28590 | 35.897 | 156 | 69 | 3 | 123 | 271 | 26 | 157 | 1.24e-16 | 78.2 |
MS.gene27771.t1 | AT2G42940 | 43.750 | 112 | 60 | 1 | 132 | 243 | 85 | 193 | 3.90e-16 | 77.4 |
MS.gene27771.t1 | AT1G76500 | 36.066 | 122 | 66 | 2 | 130 | 242 | 102 | 220 | 3.80e-15 | 75.5 |
MS.gene27771.t1 | AT2G35270 | 37.879 | 132 | 70 | 3 | 130 | 253 | 108 | 235 | 5.31e-15 | 74.7 |
MS.gene27771.t1 | AT4G17800 | 47.761 | 67 | 35 | 0 | 130 | 196 | 112 | 178 | 7.01e-15 | 74.3 |
MS.gene27771.t1 | AT4G14465 | 43.284 | 67 | 38 | 0 | 130 | 196 | 97 | 163 | 7.81e-15 | 73.9 |
MS.gene27771.t1 | AT2G45430 | 39.850 | 133 | 66 | 3 | 130 | 251 | 119 | 248 | 1.24e-13 | 70.9 |
MS.gene27771.t1 | AT4G22810 | 36.496 | 137 | 79 | 3 | 130 | 263 | 135 | 266 | 1.49e-13 | 70.9 |
MS.gene27771.t1 | AT4G12050 | 37.313 | 134 | 78 | 3 | 130 | 262 | 148 | 276 | 6.52e-13 | 68.9 |
MS.gene27771.t1 | AT3G04570 | 38.843 | 121 | 63 | 2 | 130 | 242 | 110 | 227 | 6.62e-13 | 68.9 |
MS.gene27771.t1 | AT4G35390 | 39.130 | 115 | 65 | 2 | 130 | 242 | 93 | 204 | 4.77e-12 | 66.2 |
Find 101 sgRNAs with CRISPR-Local
Find 177 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CGGCCTTTCGCCGAGAAAAC+TGG | 0.203722 | 7.1:-28111492 | MS.gene27771:CDS |
GGTGATGCATAATCAGATTT+TGG | 0.214232 | 7.1:+28111640 | None:intergenic |
TGGCGTATCACCGGTGAGTC+TGG | 0.247011 | 7.1:-28113377 | MS.gene27771:CDS |
GATTATCATCTTTAATTATC+AGG | 0.247738 | 7.1:+28111409 | None:intergenic |
CTTCGGTTTCCCCTGCTTCC+CGG | 0.257402 | 7.1:+28113222 | None:intergenic |
TTCTGGTCTTGTTGGTTACT+TGG | 0.258958 | 7.1:+28111673 | None:intergenic |
AGGGGTAGACCAAGGAAATA+TGG | 0.299572 | 7.1:-28113325 | MS.gene27771:CDS |
GTCGTAGGCGGTGGAGTTGC+TGG | 0.314787 | 7.1:-28112222 | MS.gene27771:CDS |
GATGAAAATTCATTAGAAAA+AGG | 0.314880 | 7.1:+28113244 | None:intergenic |
CTTCGTCAGCCTGATTCTTC+TGG | 0.325349 | 7.1:-28112665 | MS.gene27771:CDS |
CATGTAACTGTTCCTGAATC+TGG | 0.348264 | 7.1:-28113412 | MS.gene27771:CDS |
AGGTTTGAGTTTAATGTTCC+CGG | 0.369334 | 7.1:+28111526 | None:intergenic |
CAGACCGGCTTCTTGTTCCT+TGG | 0.373154 | 7.1:+28112283 | None:intergenic |
TGGGTTGGAGCTTCACTCCT+TGG | 0.378803 | 7.1:+28113436 | None:intergenic |
TTTGAGATACTTTCACTGTC+TGG | 0.394509 | 7.1:-28112327 | MS.gene27771:CDS |
AGAGCCACATTACCAGATTC+AGG | 0.396775 | 7.1:+28113400 | None:intergenic |
GTTGCAGCTTTCATTGAGTC+TGG | 0.409280 | 7.1:+28111451 | None:intergenic |
GAGGAACAATTAAGAAGAAA+AGG | 0.421117 | 7.1:-28113345 | MS.gene27771:CDS |
GCATACCTCGCCTGCATTGA+CGG | 0.421805 | 7.1:+28112887 | None:intergenic |
AGGAACAATTAAGAAGAAAA+GGG | 0.426921 | 7.1:-28113344 | MS.gene27771:CDS |
TGCTTGAACTCCATCCCCTT+CGG | 0.429863 | 7.1:+28113205 | None:intergenic |
TGGACATCTACTGCAAAATC+CGG | 0.432504 | 7.1:-28111545 | MS.gene27771:CDS |
GCTTCTTGTTCCTTGGTTGT+CGG | 0.436064 | 7.1:+28112290 | None:intergenic |
CCGTCTGGCCCATATTTCCT+TGG | 0.437334 | 7.1:+28113316 | None:intergenic |
TTCAGGAACAGTTACATGTT+GGG | 0.439234 | 7.1:+28113417 | None:intergenic |
GGTGCTGAATACACTGCAAT+AGG | 0.440699 | 7.1:+28111604 | None:intergenic |
AAAGTTCCGCCAGAAGAATC+AGG | 0.448010 | 7.1:+28112656 | None:intergenic |
AGCTCCATCAACTTATCATA+TGG | 0.455470 | 7.1:-28113461 | MS.gene27771:CDS |
CAAGGAACAAGAAGCCGGTC+TGG | 0.455999 | 7.1:-28112282 | MS.gene27771:CDS |
ACTCTTTCACCATTGGTTGA+AGG | 0.464058 | 7.1:+28111580 | None:intergenic |
TACATCAACTCTTTCACCAT+TGG | 0.465815 | 7.1:+28111573 | None:intergenic |
TGTAGCTGCCACTCCTGTGC+AGG | 0.467741 | 7.1:-28112193 | MS.gene27771:intron |
TAGTTTGATATTTGCATGGA+GGG | 0.470634 | 7.1:-28113526 | None:intergenic |
TCGCGGTCCTTGTTGCGAAA+AGG | 0.476324 | 7.1:+28112733 | None:intergenic |
GTTTCAGGACATTACAATGA+AGG | 0.478893 | 7.1:-28112762 | MS.gene27771:intron |
GATGGTCGTGTCGTAGGCGG+TGG | 0.481762 | 7.1:-28112231 | MS.gene27771:CDS |
GGCGTATCACCGGTGAGTCT+GGG | 0.485528 | 7.1:-28113376 | MS.gene27771:CDS |
AAAGGAGCTGAAGACGAGAT+TGG | 0.485690 | 7.1:+28113262 | None:intergenic |
AAATCACGCCACTAGCAGAT+AGG | 0.488464 | 7.1:+28112699 | None:intergenic |
CTTGTTCCTTGGTTGTCGGT+AGG | 0.489709 | 7.1:+28112294 | None:intergenic |
CGGGAAGCAGGGGAAACCGA+AGG | 0.493245 | 7.1:-28113221 | MS.gene27771:CDS |
AACACTGGAGTAACAGTGAT+AGG | 0.495781 | 7.1:-28113490 | MS.gene27771:CDS |
TCGGCGAAAGGCCGAGGGAG+AGG | 0.505477 | 7.1:+28111501 | None:intergenic |
GCAGGGGAAACCGAAGGGGA+TGG | 0.507174 | 7.1:-28113215 | MS.gene27771:CDS |
TGGCGGAACTTTGACCTATG+AGG | 0.508265 | 7.1:-28112645 | MS.gene27771:intron |
CATATCATTACCGTCAATGC+AGG | 0.510031 | 7.1:-28112897 | MS.gene27771:CDS |
GGGAAGCAGGGGAAACCGAA+GGG | 0.513646 | 7.1:-28113220 | MS.gene27771:CDS |
ACAGCAGTAACCGACCCGTC+TGG | 0.517634 | 7.1:+28113301 | None:intergenic |
GGGGTAGACCAAGGAAATAT+GGG | 0.519638 | 7.1:-28113324 | MS.gene27771:CDS |
TGAGAAATATTTACCTGCAC+AGG | 0.521667 | 7.1:+28112180 | None:intergenic |
AATGATATGCGGCATAAAGT+TGG | 0.521723 | 7.1:+28112911 | None:intergenic |
GGCCTTTCGCCGAGAAAACT+GGG | 0.523333 | 7.1:-28111491 | MS.gene27771:CDS |
CAAGGAAATATGGGCCAGAC+GGG | 0.524549 | 7.1:-28113315 | MS.gene27771:CDS |
GGAACAGTTACATGTTGGGT+TGG | 0.529114 | 7.1:+28113421 | None:intergenic |
TGTTACTTCTGAAGGTGACT+CGG | 0.530259 | 7.1:-28112940 | MS.gene27771:intron |
AGTCCTGATGGTCGTGTCGT+AGG | 0.531638 | 7.1:-28112237 | MS.gene27771:CDS |
TGAATACACTGCAATAGGTT+CGG | 0.535826 | 7.1:+28111609 | None:intergenic |
CCGCCTACGACACGACCATC+AGG | 0.536498 | 7.1:+28112234 | None:intergenic |
GAATCTGGTAATGTGGCTCT+TGG | 0.538430 | 7.1:-28113397 | MS.gene27771:CDS |
AAGAACGAGAATCACCTCAT+AGG | 0.538930 | 7.1:+28112631 | None:intergenic |
ATTTGCATGGAGGGGAGAGA+AGG | 0.539913 | 7.1:-28113517 | None:intergenic |
CTTTCACCATTGGTTGAAGG+TGG | 0.540540 | 7.1:+28111583 | None:intergenic |
CTCAAACCTTACCTCTCCCT+CGG | 0.547245 | 7.1:-28111512 | MS.gene27771:CDS |
TGTGGCTCTTGGCGTATCAC+CGG | 0.547331 | 7.1:-28113386 | MS.gene27771:CDS |
CCGGTGAGTCTGGGAATGGA+TGG | 0.548781 | 7.1:-28113367 | MS.gene27771:CDS |
CCATCCATTCCCAGACTCAC+CGG | 0.548795 | 7.1:+28113367 | None:intergenic |
ATTCAGGAACAGTTACATGT+TGG | 0.551299 | 7.1:+28113416 | None:intergenic |
GTTTCTTTGTCAAGTCCTGA+TGG | 0.553718 | 7.1:-28112249 | MS.gene27771:CDS |
AGCTTTCATTGAGTCTGGCA+TGG | 0.553939 | 7.1:+28111456 | None:intergenic |
CGTCAGCCTGATTCTTCTGG+CGG | 0.554405 | 7.1:-28112662 | MS.gene27771:CDS |
GGTGCCATATGATAAGTTGA+TGG | 0.559304 | 7.1:+28113457 | None:intergenic |
AAAGCTGGAGCTGATCCTCT+AGG | 0.560051 | 7.1:-28113175 | MS.gene27771:intron |
GGAACAAGAAGCCGGTCTGG+TGG | 0.561728 | 7.1:-28112279 | MS.gene27771:CDS |
AGTTTGATATTTGCATGGAG+GGG | 0.566173 | 7.1:-28113525 | None:intergenic |
GAAATATGGGCCAGACGGGT+CGG | 0.566885 | 7.1:-28113311 | MS.gene27771:CDS |
ATCACCGGTGAGTCTGGGAA+TGG | 0.570415 | 7.1:-28113371 | MS.gene27771:CDS |
GGAACAATTAAGAAGAAAAG+GGG | 0.574284 | 7.1:-28113343 | MS.gene27771:CDS |
CCAAGGAAATATGGGCCAGA+CGG | 0.576724 | 7.1:-28113316 | MS.gene27771:CDS |
GCAATAGGTTCGGTAACAGT+AGG | 0.585437 | 7.1:+28111619 | None:intergenic |
GCTGAAGACGAGATTGGCAA+TGG | 0.587359 | 7.1:+28113268 | None:intergenic |
GGACATCTACTGCAAAATCC+GGG | 0.588867 | 7.1:-28111544 | MS.gene27771:CDS |
AGACGGGTCGGTTACTGCTG+TGG | 0.589790 | 7.1:-28113299 | MS.gene27771:CDS |
AATATTTACCTGCACAGGAG+TGG | 0.592423 | 7.1:+28112185 | None:intergenic |
CCTGATGGTCGTGTCGTAGG+CGG | 0.605547 | 7.1:-28112234 | MS.gene27771:CDS |
TGTTCCTGAATCTGGTAATG+TGG | 0.613189 | 7.1:-28113404 | MS.gene27771:CDS |
AAACACTCATTCCACCAGAC+CGG | 0.616190 | 7.1:+28112268 | None:intergenic |
GAAAGGCCGAGGGAGAGGTA+AGG | 0.616644 | 7.1:+28111506 | None:intergenic |
GGAAGCAGGGGAAACCGAAG+GGG | 0.617839 | 7.1:-28113219 | MS.gene27771:CDS |
GGGAGAGAAGGTAACAACAC+TGG | 0.626647 | 7.1:-28113505 | MS.gene27771:CDS |
ACAACCAAGGAACAAGAAGC+CGG | 0.627528 | 7.1:-28112287 | MS.gene27771:CDS |
ATATGCATCCTATCTGCTAG+TGG | 0.629472 | 7.1:-28112707 | MS.gene27771:CDS |
ACTTCTGAAGGTGACTCGGT+CGG | 0.637545 | 7.1:-28112936 | MS.gene27771:intron |
GTGAGTCTGGGAATGGATGG+AGG | 0.638692 | 7.1:-28113364 | MS.gene27771:CDS |
TCAGCACCACCTTCAACCAA+TGG | 0.641195 | 7.1:-28111589 | MS.gene27771:CDS |
AGAAGAAAAGGGGTAGACCA+AGG | 0.648040 | 7.1:-28113333 | MS.gene27771:CDS |
GAAAGAGTTGATGTAATGAG+TGG | 0.657296 | 7.1:-28111565 | MS.gene27771:CDS |
CATTACCGTCAATGCAGGCG+AGG | 0.657493 | 7.1:-28112892 | MS.gene27771:intron |
GCATTGACGGTAATGATATG+CGG | 0.675288 | 7.1:+28112900 | None:intergenic |
CAACTTATCATATGGCACCA+AGG | 0.682724 | 7.1:-28113453 | MS.gene27771:CDS |
GATAGGATGCATATAGCTCG+CGG | 0.699011 | 7.1:+28112716 | None:intergenic |
TTCATGCCTACCGACAACCA+AGG | 0.742195 | 7.1:-28112300 | MS.gene27771:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATATTTACATCTTTAATAT+CGG | - | chr7.1:28112346-28112365 | MS.gene27771:intron | 10.0% |
!!! | ATTATATTCTGTATTTTATC+AGG | - | chr7.1:28113215-28113234 | MS.gene27771:CDS | 15.0% |
!!! | TAATATTGGTCTATAAAAAA+AGG | + | chr7.1:28111819-28111838 | None:intergenic | 15.0% |
!!! | TTTTCATTTTCATTGATTAT+TGG | - | chr7.1:28112522-28112541 | MS.gene27771:intron | 15.0% |
!! | AACTACTAACTTACTAATAT+TGG | + | chr7.1:28111833-28111852 | None:intergenic | 20.0% |
!! | ATCTAATGTTAATTCTTCTT+TGG | - | chr7.1:28112103-28112122 | MS.gene27771:intron | 20.0% |
!! | CAGAATATAATGTATTTGTT+AGG | + | chr7.1:28113206-28113225 | None:intergenic | 20.0% |
!! | GATGAAAATTCATTAGAAAA+AGG | + | chr7.1:28111690-28111709 | None:intergenic | 20.0% |
!! | TCAATGAAAATGAAAAACTA+TGG | + | chr7.1:28112518-28112537 | None:intergenic | 20.0% |
!! | TCATATAACTGTTTATGTAT+AGG | + | chr7.1:28113159-28113178 | None:intergenic | 20.0% |
!! | TCTAATGTTAATTCTTCTTT+GGG | - | chr7.1:28112104-28112123 | MS.gene27771:intron | 20.0% |
!! | TTATCTTTAGTACCATAATA+AGG | + | chr7.1:28112783-28112802 | None:intergenic | 20.0% |
!!! | ACATAACTTTTATCTACTTA+AGG | - | chr7.1:28112928-28112947 | MS.gene27771:CDS | 20.0% |
!!! | ACATAATTTTGTTGTATACT+AGG | + | chr7.1:28111956-28111975 | None:intergenic | 20.0% |
!!! | ATTTTGGTTTCTTTATTTTC+TGG | + | chr7.1:28113278-28113297 | None:intergenic | 20.0% |
!!! | TTTTCTAATGAATTTTCATC+CGG | - | chr7.1:28111690-28111709 | MS.gene27771:CDS | 20.0% |
! | AATCTTCAATGTGTAGTATA+CGG | - | chr7.1:28112874-28112893 | MS.gene27771:intron | 25.0% |
! | AGGAACAATTAAGAAGAAAA+GGG | - | chr7.1:28111587-28111606 | MS.gene27771:CDS | 25.0% |
! | ATCAAATCAAAAATACCTAG+AGG | + | chr7.1:28111774-28111793 | None:intergenic | 25.0% |
! | TTAGTACCATAATAAGGATA+GGG | + | chr7.1:28112777-28112796 | None:intergenic | 25.0% |
! | TTATTTGAACTTACTACTAC+TGG | - | chr7.1:28112966-28112985 | MS.gene27771:intron | 25.0% |
! | TTTAGTACCATAATAAGGAT+AGG | + | chr7.1:28112778-28112797 | None:intergenic | 25.0% |
!! | ATATTCTGTATTTTATCAGG+TGG | - | chr7.1:28113218-28113237 | MS.gene27771:CDS | 25.0% |
!! | ATGTTTCATTTTATCCCTTA+GGG | - | chr7.1:28112577-28112596 | MS.gene27771:intron | 25.0% |
!! | TTTCTAATGAATTTTCATCC+GGG | - | chr7.1:28111691-28111710 | MS.gene27771:CDS | 25.0% |
!!! | AGTAGTTAAGTTAGTTTTCA+GGG | - | chr7.1:28111846-28111865 | MS.gene27771:intron | 25.0% |
!!! | GGTATGAATTTTGTTTTGAT+TGG | - | chr7.1:28112543-28112562 | MS.gene27771:intron | 25.0% |
!!! | TAGTAGTTAAGTTAGTTTTC+AGG | - | chr7.1:28111845-28111864 | MS.gene27771:intron | 25.0% |
ATGAATGTTGAACTTATACG+AGG | + | chr7.1:28112488-28112507 | None:intergenic | 30.0% | |
GAAGTAACAACAATAGTTAG+TGG | + | chr7.1:28111980-28111999 | None:intergenic | 30.0% | |
GAGGAACAATTAAGAAGAAA+AGG | - | chr7.1:28111586-28111605 | MS.gene27771:CDS | 30.0% | |
GGAACAATTAAGAAGAAAAG+GGG | - | chr7.1:28111588-28111607 | MS.gene27771:CDS | 30.0% | |
GTATAAGTTCAACATTCATG+TGG | - | chr7.1:28112489-28112508 | MS.gene27771:intron | 30.0% | |
TTATCTACTTAAGGACTGTT+TGG | - | chr7.1:28112937-28112956 | MS.gene27771:intron | 30.0% | |
! | ACTATTGTTGTTACTTCTGA+AGG | - | chr7.1:28111983-28112002 | MS.gene27771:intron | 30.0% |
! | CATGTTTCATTTTATCCCTT+AGG | - | chr7.1:28112576-28112595 | MS.gene27771:intron | 30.0% |
!! | TCATGTACACTCATTTTTGT+CGG | - | chr7.1:28112803-28112822 | MS.gene27771:intron | 30.0% |
!!! | CTTTACTCTTTTGTTGTTTC+AGG | - | chr7.1:28112154-28112173 | MS.gene27771:intron | 30.0% |
!!! | TCTTTATTTTCTGGTCTTGT+TGG | + | chr7.1:28113269-28113288 | None:intergenic | 30.0% |
AAACCTCTGTCACACAAAAT+AGG | - | chr7.1:28112383-28112402 | MS.gene27771:intron | 35.0% | |
AACTTCAAGCAACATTCATG+TGG | - | chr7.1:28112437-28112456 | MS.gene27771:intron | 35.0% | |
AATGATATGCGGCATAAAGT+TGG | + | chr7.1:28112023-28112042 | None:intergenic | 35.0% | |
ACACAAAATAGGACTTCGTT+CGG | - | chr7.1:28112394-28112413 | MS.gene27771:intron | 35.0% | |
AGCTCCATCAACTTATCATA+TGG | - | chr7.1:28111470-28111489 | MS.gene27771:CDS | 35.0% | |
ATTCAGGAACAGTTACATGT+TGG | + | chr7.1:28111518-28111537 | None:intergenic | 35.0% | |
GTTTCAGGACATTACAATGA+AGG | - | chr7.1:28112169-28112188 | MS.gene27771:intron | 35.0% | |
TACATCAACTCTTTCACCAT+TGG | + | chr7.1:28113361-28113380 | None:intergenic | 35.0% | |
TGAATACACTGCAATAGGTT+CGG | + | chr7.1:28113325-28113344 | None:intergenic | 35.0% | |
TGAGAAATATTTACCTGCAC+AGG | + | chr7.1:28112754-28112773 | None:intergenic | 35.0% | |
TTCAGGAACAGTTACATGTT+GGG | + | chr7.1:28111517-28111536 | None:intergenic | 35.0% | |
TTCTCACCCTATCCTTATTA+TGG | - | chr7.1:28112768-28112787 | MS.gene27771:intron | 35.0% | |
! | AGGTTTGAGTTTAATGTTCC+CGG | + | chr7.1:28113408-28113427 | None:intergenic | 35.0% |
! | GGTGATGCATAATCAGATTT+TGG | + | chr7.1:28113294-28113313 | None:intergenic | 35.0% |
! | GTATTTTATCAGGTGGTTGT+TGG | - | chr7.1:28113225-28113244 | MS.gene27771:CDS | 35.0% |
! | GTTATATCCTTTTCGCAACA+AGG | - | chr7.1:28112191-28112210 | MS.gene27771:intron | 35.0% |
! | TTTGAGATACTTTCACTGTC+TGG | - | chr7.1:28112604-28112623 | MS.gene27771:intron | 35.0% |
!! | ACACTAAAAGTGTTTCAAGG+AGG | + | chr7.1:28111885-28111904 | None:intergenic | 35.0% |
!! | CACTAAAAGTGTTTCAAGGA+GGG | + | chr7.1:28111884-28111903 | None:intergenic | 35.0% |
!! | GAAAGAGTTGATGTAATGAG+TGG | - | chr7.1:28113366-28113385 | MS.gene27771:CDS | 35.0% |
!! | GTTGTTTTCATAAGCAATCC+TGG | + | chr7.1:28113081-28113100 | None:intergenic | 35.0% |
!! | TACACTCATTTTTGTCGGTA+GGG | - | chr7.1:28112808-28112827 | MS.gene27771:intron | 35.0% |
AACACTGGAGTAACAGTGAT+AGG | - | chr7.1:28111441-28111460 | MS.gene27771:CDS | 40.0% | |
AAGAACGAGAATCACCTCAT+AGG | + | chr7.1:28112303-28112322 | None:intergenic | 40.0% | |
AAGTACTTGTGAGCCTGTTT+GGG | - | chr7.1:28112992-28113011 | MS.gene27771:intron | 40.0% | |
AATATTTACCTGCACAGGAG+TGG | + | chr7.1:28112749-28112768 | None:intergenic | 40.0% | |
AGCCTGTTTGGGAGAATTTA+CGG | - | chr7.1:28113003-28113022 | MS.gene27771:intron | 40.0% | |
AGTATCTCAAAACGACCCTA+AGG | + | chr7.1:28112595-28112614 | None:intergenic | 40.0% | |
ATATGCATCCTATCTGCTAG+TGG | - | chr7.1:28112224-28112243 | MS.gene27771:CDS | 40.0% | |
CAACTTATCATATGGCACCA+AGG | - | chr7.1:28111478-28111497 | MS.gene27771:CDS | 40.0% | |
CATATCATTACCGTCAATGC+AGG | - | chr7.1:28112034-28112053 | MS.gene27771:intron | 40.0% | |
CATGTAACTGTTCCTGAATC+TGG | - | chr7.1:28111519-28111538 | MS.gene27771:CDS | 40.0% | |
GTATCTCAAAACGACCCTAA+GGG | + | chr7.1:28112594-28112613 | None:intergenic | 40.0% | |
GTTTCTTTGTCAAGTCCTGA+TGG | - | chr7.1:28112682-28112701 | MS.gene27771:CDS | 40.0% | |
TAAGTACTTGTGAGCCTGTT+TGG | - | chr7.1:28112991-28113010 | MS.gene27771:intron | 40.0% | |
TGGACATCTACTGCAAAATC+CGG | - | chr7.1:28113386-28113405 | MS.gene27771:CDS | 40.0% | |
TTCAAGCAGTCGAAAAAAGC+TGG | - | chr7.1:28111741-28111760 | MS.gene27771:intron | 40.0% | |
TTCCGTAAATTCTCCCAAAC+AGG | + | chr7.1:28113008-28113027 | None:intergenic | 40.0% | |
! | ACTCTTTCACCATTGGTTGA+AGG | + | chr7.1:28113354-28113373 | None:intergenic | 40.0% |
! | AGTCCTATTTTGTGTGACAG+AGG | + | chr7.1:28112389-28112408 | None:intergenic | 40.0% |
! | GCATGTTAACCCAGTTTTCT+CGG | + | chr7.1:28113452-28113471 | None:intergenic | 40.0% |
! | GCATTGACGGTAATGATATG+CGG | + | chr7.1:28112034-28112053 | None:intergenic | 40.0% |
! | GGTGCCATATGATAAGTTGA+TGG | + | chr7.1:28111477-28111496 | None:intergenic | 40.0% |
! | TGTTACTTCTGAAGGTGACT+CGG | - | chr7.1:28111991-28112010 | MS.gene27771:intron | 40.0% |
! | TGTTCCTGAATCTGGTAATG+TGG | - | chr7.1:28111527-28111546 | MS.gene27771:CDS | 40.0% |
! | TTTTGTCGGTAGGGTTTCAA+CGG | - | chr7.1:28112817-28112836 | MS.gene27771:intron | 40.0% |
!! | AGTTTTCAGGGTTTGAACAC+CGG | - | chr7.1:28111858-28111877 | MS.gene27771:intron | 40.0% |
!! | GGGACACTAAAAGTGTTTCA+AGG | + | chr7.1:28111888-28111907 | None:intergenic | 40.0% |
!! | GGTTGGTAAGATTGTACTCA+CGG | - | chr7.1:28112850-28112869 | MS.gene27771:intron | 40.0% |
!! | GTACACTCATTTTTGTCGGT+AGG | - | chr7.1:28112807-28112826 | MS.gene27771:intron | 40.0% |
!! | TTCTGGTCTTGTTGGTTACT+TGG | + | chr7.1:28113261-28113280 | None:intergenic | 40.0% |
AAACACTCATTCCACCAGAC+CGG | + | chr7.1:28112666-28112685 | None:intergenic | 45.0% | |
AAAGGAGCTGAAGACGAGAT+TGG | + | chr7.1:28111672-28111691 | None:intergenic | 45.0% | |
AAAGTTCCGCCAGAAGAATC+AGG | + | chr7.1:28112278-28112297 | None:intergenic | 45.0% | |
AAATCACGCCACTAGCAGAT+AGG | + | chr7.1:28112235-28112254 | None:intergenic | 45.0% | |
AAGCAATCCTGGAGAGCTAA+CGG | + | chr7.1:28113070-28113089 | None:intergenic | 45.0% | |
ACAACCAAGGAACAAGAAGC+CGG | - | chr7.1:28112644-28112663 | MS.gene27771:intron | 45.0% | |
AGAAGAAAAGGGGTAGACCA+AGG | - | chr7.1:28111598-28111617 | MS.gene27771:CDS | 45.0% | |
AGAGCCACATTACCAGATTC+AGG | + | chr7.1:28111534-28111553 | None:intergenic | 45.0% | |
AGCTTTCATTGAGTCTGGCA+TGG | + | chr7.1:28113478-28113497 | None:intergenic | 45.0% | |
AGGGGTAGACCAAGGAAATA+TGG | - | chr7.1:28111606-28111625 | MS.gene27771:CDS | 45.0% | |
GATAGGATGCATATAGCTCG+CGG | + | chr7.1:28112218-28112237 | None:intergenic | 45.0% | |
GCTTCTTGTTCCTTGGTTGT+CGG | + | chr7.1:28112644-28112663 | None:intergenic | 45.0% | |
GGAACAGTTACATGTTGGGT+TGG | + | chr7.1:28111513-28111532 | None:intergenic | 45.0% | |
GGACATCTACTGCAAAATCC+GGG | - | chr7.1:28113387-28113406 | MS.gene27771:CDS | 45.0% | |
GGGGTAGACCAAGGAAATAT+GGG | - | chr7.1:28111607-28111626 | MS.gene27771:CDS | 45.0% | |
GTTGCAGCTTTCATTGAGTC+TGG | + | chr7.1:28113483-28113502 | None:intergenic | 45.0% | |
TTTGTCGGTAGGGTTTCAAC+GGG | - | chr7.1:28112818-28112837 | MS.gene27771:intron | 45.0% | |
! | AATTTTCATCCGGGAAGCAG+GGG | - | chr7.1:28111700-28111719 | MS.gene27771:intron | 45.0% |
! | ACTATTTCCGTTAGCTCTCC+AGG | - | chr7.1:28113060-28113079 | MS.gene27771:intron | 45.0% |
! | CTTTCACCATTGGTTGAAGG+TGG | + | chr7.1:28113351-28113370 | None:intergenic | 45.0% |
! | GAATCTGGTAATGTGGCTCT+TGG | - | chr7.1:28111534-28111553 | MS.gene27771:CDS | 45.0% |
! | GAATTTTCATCCGGGAAGCA+GGG | - | chr7.1:28111699-28111718 | MS.gene27771:intron | 45.0% |
! | GCAATAGGTTCGGTAACAGT+AGG | + | chr7.1:28113315-28113334 | None:intergenic | 45.0% |
! | GGTGCTGAATACACTGCAAT+AGG | + | chr7.1:28113330-28113349 | None:intergenic | 45.0% |
! | TGAATTTTCATCCGGGAAGC+AGG | - | chr7.1:28111698-28111717 | MS.gene27771:intron | 45.0% |
!! | AAAAGTGTTTCAAGGAGGGC+CGG | + | chr7.1:28111880-28111899 | None:intergenic | 45.0% |
AAAGCTGGAGCTGATCCTCT+AGG | - | chr7.1:28111756-28111775 | MS.gene27771:intron | 50.0% | |
ACCATCCCTCGCAAATAGCT+CGG | + | chr7.1:28111923-28111942 | None:intergenic | 50.0% | |
ATAGCTCGGTTGGCAAGCTA+AGG | + | chr7.1:28111909-28111928 | None:intergenic | 50.0% | |
CAAGGAAATATGGGCCAGAC+GGG | - | chr7.1:28111616-28111635 | MS.gene27771:CDS | 50.0% | |
CCAAGGAAATATGGGCCAGA+CGG | - | chr7.1:28111615-28111634 | MS.gene27771:CDS | 50.0% | |
CTCAAACCTTACCTCTCCCT+CGG | - | chr7.1:28113419-28113438 | MS.gene27771:CDS | 50.0% | |
CTTCGTCAGCCTGATTCTTC+TGG | - | chr7.1:28112266-28112285 | MS.gene27771:CDS | 50.0% | |
CTTGTTCCTTGGTTGTCGGT+AGG | + | chr7.1:28112640-28112659 | None:intergenic | 50.0% | |
GCTGAAGACGAGATTGGCAA+TGG | + | chr7.1:28111666-28111685 | None:intergenic | 50.0% | |
GGGAGAGAAGGTAACAACAC+TGG | - | chr7.1:28111426-28111445 | MS.gene27771:CDS | 50.0% | |
TAGCTCGGTTGGCAAGCTAA+GGG | + | chr7.1:28111908-28111927 | None:intergenic | 50.0% | |
TCAGCACCACCTTCAACCAA+TGG | - | chr7.1:28113342-28113361 | MS.gene27771:CDS | 50.0% | |
TGCTTGAACTCCATCCCCTT+CGG | + | chr7.1:28111729-28111748 | None:intergenic | 50.0% | |
TGGCGGAACTTTGACCTATG+AGG | - | chr7.1:28112286-28112305 | MS.gene27771:CDS | 50.0% | |
TTCATGCCTACCGACAACCA+AGG | - | chr7.1:28112631-28112650 | MS.gene27771:intron | 50.0% | |
TTGTCGGTAGGGTTTCAACG+GGG | - | chr7.1:28112819-28112838 | MS.gene27771:intron | 50.0% | |
! | AACCCAGTTTTCTCGGCGAA+AGG | + | chr7.1:28113445-28113464 | None:intergenic | 50.0% |
!! | ACTTCTGAAGGTGACTCGGT+CGG | - | chr7.1:28111995-28112014 | MS.gene27771:intron | 50.0% |
ACCGAGCTATTTGCGAGGGA+TGG | - | chr7.1:28111919-28111938 | MS.gene27771:intron | 55.0% | |
AGTCCTGATGGTCGTGTCGT+AGG | - | chr7.1:28112694-28112713 | MS.gene27771:CDS | 55.0% | |
ATCACCGGTGAGTCTGGGAA+TGG | - | chr7.1:28111560-28111579 | MS.gene27771:CDS | 55.0% | |
CAAGGAACAAGAAGCCGGTC+TGG | - | chr7.1:28112649-28112668 | MS.gene27771:CDS | 55.0% | |
CATTACCGTCAATGCAGGCG+AGG | - | chr7.1:28112039-28112058 | MS.gene27771:intron | 55.0% | |
CCATCCATTCCCAGACTCAC+CGG | + | chr7.1:28111567-28111586 | None:intergenic | 55.0% | |
CCGTCTGGCCCATATTTCCT+TGG | + | chr7.1:28111618-28111637 | None:intergenic | 55.0% | |
CGTCAGCCTGATTCTTCTGG+CGG | - | chr7.1:28112269-28112288 | MS.gene27771:CDS | 55.0% | |
GAAATATGGGCCAGACGGGT+CGG | - | chr7.1:28111620-28111639 | MS.gene27771:CDS | 55.0% | |
GCATACCTCGCCTGCATTGA+CGG | + | chr7.1:28112047-28112066 | None:intergenic | 55.0% | |
GCCAACCGAGCTATTTGCGA+GGG | - | chr7.1:28111915-28111934 | MS.gene27771:intron | 55.0% | |
GGCCTTTCGCCGAGAAAACT+GGG | - | chr7.1:28113440-28113459 | MS.gene27771:CDS | 55.0% | |
GTGAGTCTGGGAATGGATGG+AGG | - | chr7.1:28111567-28111586 | MS.gene27771:CDS | 55.0% | |
TCCCTCGCAAATAGCTCGGT+TGG | + | chr7.1:28111919-28111938 | None:intergenic | 55.0% | |
TCGCGGTCCTTGTTGCGAAA+AGG | + | chr7.1:28112201-28112220 | None:intergenic | 55.0% | |
TGCCAACCGAGCTATTTGCG+AGG | - | chr7.1:28111914-28111933 | MS.gene27771:intron | 55.0% | |
TGTCGGTAGGGTTTCAACGG+GGG | - | chr7.1:28112820-28112839 | MS.gene27771:intron | 55.0% | |
TGTGGCTCTTGGCGTATCAC+CGG | - | chr7.1:28111545-28111564 | MS.gene27771:CDS | 55.0% | |
! | CAGACCGGCTTCTTGTTCCT+TGG | + | chr7.1:28112651-28112670 | None:intergenic | 55.0% |
! | TGGGTTGGAGCTTCACTCCT+TGG | + | chr7.1:28111498-28111517 | None:intergenic | 55.0% |
! | TTTTCTCGGCGAAAGGCCGA+GGG | + | chr7.1:28113438-28113457 | None:intergenic | 55.0% |
ACAGCAGTAACCGACCCGTC+TGG | + | chr7.1:28111633-28111652 | None:intergenic | 60.0% | |
AGACGGGTCGGTTACTGCTG+TGG | - | chr7.1:28111632-28111651 | MS.gene27771:CDS | 60.0% | |
CCGGTGAGTCTGGGAATGGA+TGG | - | chr7.1:28111564-28111583 | MS.gene27771:CDS | 60.0% | |
CCTGATGGTCGTGTCGTAGG+CGG | - | chr7.1:28112697-28112716 | MS.gene27771:CDS | 60.0% | |
CGGCCTTTCGCCGAGAAAAC+TGG | - | chr7.1:28113439-28113458 | MS.gene27771:CDS | 60.0% | |
CTTCGGTTTCCCCTGCTTCC+CGG | + | chr7.1:28111712-28111731 | None:intergenic | 60.0% | |
GAAAGGCCGAGGGAGAGGTA+AGG | + | chr7.1:28113428-28113447 | None:intergenic | 60.0% | |
GGAACAAGAAGCCGGTCTGG+TGG | - | chr7.1:28112652-28112671 | MS.gene27771:CDS | 60.0% | |
GGAAGCAGGGGAAACCGAAG+GGG | - | chr7.1:28111712-28111731 | MS.gene27771:intron | 60.0% | |
GGCGTATCACCGGTGAGTCT+GGG | - | chr7.1:28111555-28111574 | MS.gene27771:CDS | 60.0% | |
GGGAAGCAGGGGAAACCGAA+GGG | - | chr7.1:28111711-28111730 | MS.gene27771:intron | 60.0% | |
GGTTTCAACGGGGGACGAGT+TGG | - | chr7.1:28112829-28112848 | MS.gene27771:intron | 60.0% | |
TGGCGTATCACCGGTGAGTC+TGG | - | chr7.1:28111554-28111573 | MS.gene27771:CDS | 60.0% | |
TGTAGCTGCCACTCCTGTGC+AGG | - | chr7.1:28112738-28112757 | MS.gene27771:CDS | 60.0% | |
! | GTTTTCTCGGCGAAAGGCCG+AGG | + | chr7.1:28113439-28113458 | None:intergenic | 60.0% |
!! | TCAACGGGGGACGAGTTGGT+TGG | - | chr7.1:28112833-28112852 | MS.gene27771:intron | 60.0% |
CCGCCTACGACACGACCATC+AGG | + | chr7.1:28112700-28112719 | None:intergenic | 65.0% | |
CGGGAAGCAGGGGAAACCGA+AGG | - | chr7.1:28111710-28111729 | MS.gene27771:intron | 65.0% | |
GATGGTCGTGTCGTAGGCGG+TGG | - | chr7.1:28112700-28112719 | MS.gene27771:CDS | 65.0% | |
GCAGGGGAAACCGAAGGGGA+TGG | - | chr7.1:28111716-28111735 | MS.gene27771:intron | 65.0% | |
GTCGTAGGCGGTGGAGTTGC+TGG | - | chr7.1:28112709-28112728 | MS.gene27771:CDS | 65.0% | |
TCGGCGAAAGGCCGAGGGAG+AGG | + | chr7.1:28113433-28113452 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.1 | gene | 28111420 | 28113533 | 28111420 | ID=MS.gene27771 |
chr7.1 | mRNA | 28111420 | 28113533 | 28111420 | ID=MS.gene27771.t1;Parent=MS.gene27771 |
chr7.1 | exon | 28113176 | 28113533 | 28113176 | ID=MS.gene27771.t1.exon1;Parent=MS.gene27771.t1 |
chr7.1 | CDS | 28113176 | 28113533 | 28113176 | ID=cds.MS.gene27771.t1;Parent=MS.gene27771.t1 |
chr7.1 | exon | 28112893 | 28112948 | 28112893 | ID=MS.gene27771.t1.exon2;Parent=MS.gene27771.t1 |
chr7.1 | CDS | 28112893 | 28112948 | 28112893 | ID=cds.MS.gene27771.t1;Parent=MS.gene27771.t1 |
chr7.1 | exon | 28112646 | 28112777 | 28112646 | ID=MS.gene27771.t1.exon3;Parent=MS.gene27771.t1 |
chr7.1 | CDS | 28112646 | 28112777 | 28112646 | ID=cds.MS.gene27771.t1;Parent=MS.gene27771.t1 |
chr7.1 | exon | 28112194 | 28112355 | 28112194 | ID=MS.gene27771.t1.exon4;Parent=MS.gene27771.t1 |
chr7.1 | CDS | 28112194 | 28112355 | 28112194 | ID=cds.MS.gene27771.t1;Parent=MS.gene27771.t1 |
chr7.1 | exon | 28111420 | 28111716 | 28111420 | ID=MS.gene27771.t1.exon5;Parent=MS.gene27771.t1 |
chr7.1 | CDS | 28111420 | 28111716 | 28111420 | ID=cds.MS.gene27771.t1;Parent=MS.gene27771.t1 |
Gene Sequence |
Protein sequence |